Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-26 12:14:01 (9648): vboxwrapper version 26210
2025-11-26 12:14:01 (9648): BOINC client version: 8.0.2
2025-11-26 12:14:01 (9648): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-11-26 12:14:02 (9648): Successfully copied 'init_data.xml' to the shared directory.
2025-11-26 12:14:02 (9648): Create VM. (boinc_d7237bf11c8c507f, slot#3)
2025-11-26 12:14:03 (9648): Setting Memory Size for VM. (4700MB)
2025-11-26 12:14:03 (9648): Setting CPU Count for VM. (7)
2025-11-26 12:14:03 (9648): Setting Chipset Options for VM.
2025-11-26 12:14:03 (9648): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-26 12:14:04 (9648): Setting Boot Options for VM.
2025-11-26 12:14:04 (9648): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-26 12:14:04 (9648): Enabling VM Network Access.
2025-11-26 12:14:05 (9648): Disabling USB Support for VM.
2025-11-26 12:14:05 (9648): Disabling COM Port Support for VM.
2025-11-26 12:14:05 (9648): Disabling LPT Port Support for VM.
2025-11-26 12:14:05 (9648): Disabling Audio Support for VM.
2025-11-26 12:14:06 (9648): Disabling Clipboard Support for VM.
2025-11-26 12:14:06 (9648): Disabling Drag and Drop Support for VM.
2025-11-26 12:14:06 (9648): Adding storage controller(s) to VM.
2025-11-26 12:14:06 (9648): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-26 12:14:07 (9648): Adding VirtualBox Guest Additions to VM.
2025-11-26 12:14:07 (9648): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-26 12:14:07 (9648): forwarding host port 61575 to guest port 80
2025-11-26 12:14:08 (9648): Enabling remote desktop for VM.
2025-11-26 12:14:08 (9648): Required extension pack not installed, remote desktop not enabled.
2025-11-26 12:14:08 (9648): Enabling shared directory for VM.
2025-11-26 12:14:08 (9648): Starting VM using VBoxManage interface. (boinc_d7237bf11c8c507f, slot#3)
2025-11-26 12:14:12 (9648): Successfully started VM. (PID = '8032')
2025-11-26 12:14:12 (9648): Reporting VM Process ID to BOINC.
2025-11-26 12:14:12 (9648): Guest Log: BIOS: VirtualBox 6.1.50
2025-11-26 12:14:12 (9648): Guest Log: CPUID EDX: 0x178bfbff
2025-11-26 12:14:12 (9648): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-26 12:14:12 (9648): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-26 12:14:12 (9648): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-26 12:14:12 (9648): Detected: Web Application Enabled (http://localhost:61575)
2025-11-26 12:14:12 (9648): Preference change detected
2025-11-26 12:14:12 (9648): Setting CPU throttle for VM. (100%)
2025-11-26 12:14:12 (9648): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-26 12:14:14 (9648): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-26 12:14:14 (9648): Guest Log: BIOS: Booting from Hard Disk...
2025-11-26 12:14:17 (9648): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-26 12:14:17 (9648): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-26 12:14:17 (9648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-26 12:14:27 (9648): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-26 12:14:27 (9648): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-11-26 12:14:32 (9648): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-26 12:14:32 (9648): Guest Log: 00:00:00.000108 main     Log opened 2025-11-26T12:14:31.520223000Z
2025-11-26 12:14:32 (9648): Guest Log: 00:00:00.000180 main     OS Product: Linux
2025-11-26 12:14:32 (9648): Guest Log: 00:00:00.000199 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-26 12:14:32 (9648): Guest Log: 00:00:00.000214 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-26 12:14:32 (9648): Guest Log: 00:00:00.000229 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-26 12:14:32 (9648): Guest Log: 00:00:00.000229 main     Process ID: 1352
2025-11-26 12:14:32 (9648): Guest Log: 00:00:00.000230 main     Package type: LINUX_64BITS_GENERIC
2025-11-26 12:14:32 (9648): Guest Log: 00:00:00.000886 main     5.2.32 r132073 started. Verbose level = 0
2025-11-26 12:14:32 (9648): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-26 12:14:32 (9648): Guest Log: [INFO] Mounting shared directory
2025-11-26 12:14:32 (9648): Guest Log: [INFO] Checking for init_data.xml
2025-11-26 12:14:40 (9648): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-26 12:14:41 (9648): Guest Log: [INFO] Detected branch: prod
2025-11-26 12:14:41 (9648): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-26 12:14:41 (9648): Guest Log: Copying input files
2025-11-26 12:14:41 (9648): Guest Log: 00:00:10.037285 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 598 434 535 000ns (GuestNow=1 764 155 673 087 885 000 ns GuestLast=1 764 159 271 522 420 000 ns fSetTimeLastLoop=true )
2025-11-26 12:14:42 (9648): Guest Log: Copied input files into RunAtlas.
2025-11-26 12:14:42 (9648): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-26 12:14:42 (9648): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-26 12:14:42 (9648): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-26 12:14:42 (9648): Guest Log: Further information can be found at the LHC@home message board.
2025-11-26 12:14:51 (9648): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-26 12:14:52 (9648): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-26 12:14:52 (9648): Guest Log: 2.6.3.0 1632 0 30156 153320 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-26 12:14:53 (9648): Guest Log: copied the webapp to /var/www
2025-11-26 12:14:53 (9648): Guest Log: ATHENA_PROC_NUMBER=7
2025-11-26 12:14:53 (9648): Guest Log: ATHENA_CORE_NUMBER=7
2025-11-26 12:14:53 (9648): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-26 12:14:53 (9648): Guest Log:  *** Starting ATLAS job. (PandaID=6896990070 taskID=47556161) ***
2025-11-26 13:54:14 (9648): Status Report: Elapsed Time: '6000.000000'
2025-11-26 13:54:14 (9648): Status Report: CPU Time: '39600.671875'
2025-11-26 15:34:17 (9648): Status Report: Elapsed Time: '12000.000000'
2025-11-26 15:34:17 (9648): Status Report: CPU Time: '81516.625000'
2025-11-26 17:14:19 (9648): Status Report: Elapsed Time: '18000.000000'
2025-11-26 17:14:19 (9648): Status Report: CPU Time: '123422.140625'
2025-11-26 18:54:21 (9648): Status Report: Elapsed Time: '24000.000000'
2025-11-26 18:54:21 (9648): Status Report: CPU Time: '165325.937500'
2025-11-26 20:34:23 (9648): Status Report: Elapsed Time: '30000.000000'
2025-11-26 20:34:23 (9648): Status Report: CPU Time: '207252.203125'
2025-11-26 20:46:37 (9648): Guest Log:  *** Job finished ***
2025-11-26 20:46:37 (9648): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-26 20:46:37 (9648): Guest Log: 2025-11-26 19:56:21,187 | INFO     | all workflow threads have been joined
2025-11-26 20:46:37 (9648): Guest Log: 2025-11-26 19:56:21,187 | INFO     | end of generic workflow (traces error code: 0)
2025-11-26 20:46:37 (9648): Guest Log: 2025-11-26 19:56:21,187 | INFO     | traces error code: 0
2025-11-26 20:46:37 (9648): Guest Log: 2025-11-26 19:56:21,188 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-26 20:46:37 (9648): Guest Log: 2025-11-26 19:56:23,474 | INFO     | PID=6070 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-11-26 20:46:37 (9648): Guest Log: 2025-11-26 19:56:23,475 | INFO     | found 0 job(s) in 20 queues
2025-11-26 20:46:37 (9648): Guest Log: 2025-11-26 19:56:23,475 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-26 20:46:37 (9648): Guest Log: 2025-11-26 19:56:23,475 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-26 20:46:37 (9648): Guest Log: 2025-11-26 19:56:23,475 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-26 20:46:37 (9648): Guest Log: 2025-11-26 19:56:23,475 | INFO     | [monitor] control thread has ended
2025-11-26 20:46:37 (9648): Guest Log: 2025-11-26 19:56:23,598 [wrapper] ==== pilot stdout END ====
2025-11-26 20:46:37 (9648): Guest Log: 2025-11-26 19:56:23,602 [wrapper] ==== wrapper stdout RESUME ====
2025-11-26 20:46:37 (9648): Guest Log: 2025-11-26 19:56:23,606 [wrapper] pilotpid: 6070
2025-11-26 20:46:37 (9648): Guest Log: 2025-11-26 19:56:23,612 [wrapper] Pilot exit status: 0
2025-11-26 20:46:37 (9648): Guest Log: 2025-11-26 19:56:23,625 [wrapper] pandaids: 6896990070
2025-11-26 20:46:37 (9648): Guest Log: 2025-11-26 19:56:23,655 [wrapper] cleanup supervisor_pilot 10998 6071
2025-11-26 20:46:37 (9648): Guest Log: 2025-11-26 19:56:23,660 [wrapper] Test setup, not cleaning
2025-11-26 20:46:37 (9648): Guest Log: 2025-11-26 19:56:23,665 [wrapper] apfmon messages muted
2025-11-26 20:46:37 (9648): Guest Log: 2025-11-26 19:56:23,670 [wrapper] ==== wrapper stdout END ====
2025-11-26 20:46:37 (9648): Guest Log: 2025-11-26 19:56:23,675 [wrapper] ==== wrapper stderr END ====
2025-11-26 20:46:37 (9648): Guest Log:  *** Error codes and diagnostics ***
2025-11-26 20:46:37 (9648): Guest Log:     "exeErrorCode": 0,
2025-11-26 20:46:37 (9648): Guest Log:     "exeErrorDiag": "",
2025-11-26 20:46:37 (9648): Guest Log:     "pilotErrorCode": 0,
2025-11-26 20:46:37 (9648): Guest Log:     "pilotErrorDiag": "",
2025-11-26 20:46:37 (9648): Guest Log:  *** Listing of results directory ***
2025-11-26 20:46:37 (9648): Guest Log: total 925772
2025-11-26 20:46:37 (9648): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 25 12:49 pilot3.tar.gz
2025-11-26 20:46:37 (9648): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 25 13:04 runpilot2-wrapper.sh
2025-11-26 20:46:37 (9648): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 25 13:04 queuedata.json
2025-11-26 20:46:37 (9648): Guest Log: -rwxr-xr-x. 1 atlas atlas      9128 Nov 26 11:14 init_data.xml
2025-11-26 20:46:37 (9648): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 26 11:14 start_atlas.sh
2025-11-26 20:46:37 (9648): Guest Log: -rwxr-xr-x. 1 atlas atlas    590103 Nov 26 11:14 input.tar.gz
2025-11-26 20:46:37 (9648): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 26 11:14 EVNT.47483658._002167.pool.root.1 -> /data/./ATLAS.root_0
2025-11-26 20:46:37 (9648): Guest Log: -rw-r--r--. 1 atlas atlas      2784 Nov 26 11:14 pandaJob.out
2025-11-26 20:46:37 (9648): Guest Log: -rw-------. 1 atlas atlas    991830 Nov 26 11:15 agis_schedconf.cvmfs.json
2025-11-26 20:46:37 (9648): Guest Log: drwx------. 5 atlas atlas      4096 Nov 26 11:15 pilot3
2025-11-26 20:46:37 (9648): Guest Log: -rw-------. 1 atlas atlas 932121102 Nov 26 19:55 HITS.47556161._001510.pool.root.1
2025-11-26 20:46:37 (9648): Guest Log: -rw-------. 1 atlas atlas      1038 Nov 26 19:55 memory_monitor_summary.json
2025-11-26 20:46:37 (9648): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 26 19:55 agis_ddmendpoints.agis.ALL.json
2025-11-26 20:46:37 (9648): Guest Log: -rw-------. 1 atlas atlas   1679406 Nov 26 19:55 log.47556161._001510.job.log.tgz.1
2025-11-26 20:46:37 (9648): Guest Log: -rw-------. 1 atlas atlas      8640 Nov 26 19:55 heartbeat.json
2025-11-26 20:46:37 (9648): Guest Log: -rw-------. 1 atlas atlas        95 Nov 26 19:56 pilot_heartbeat.json
2025-11-26 20:46:37 (9648): Guest Log: -rw-------. 1 atlas atlas       744 Nov 26 19:56 pilotlog.txt
2025-11-26 20:46:37 (9648): Guest Log: -rw-------. 1 atlas atlas   4330232 Nov 26 19:56 log.47556161._001510.job.log.1
2025-11-26 20:46:37 (9648): Guest Log: -rw-------. 1 atlas atlas       353 Nov 26 19:56 output.list
2025-11-26 20:46:37 (9648): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 26 19:56 runtime_log
2025-11-26 20:46:37 (9648): Guest Log: -rw-------. 1 atlas atlas   6031360 Nov 26 19:56 result.tar.gz
2025-11-26 20:46:37 (9648): Guest Log: -rw-r--r--. 1 atlas atlas      8744 Nov 26 19:56 runtime_log.err
2025-11-26 20:46:37 (9648): Guest Log: -rw-------. 1 atlas atlas       659 Nov 26 19:56 2EvMDmut7h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJOMKDmUa1wsn.diag
2025-11-26 20:46:37 (9648): Guest Log: Looking for outputfile HITS.47556161._001510.pool.root.1
2025-11-26 20:46:37 (9648): Guest Log: HITS file was successfully produced
2025-11-26 20:46:37 (9648): Guest Log: -rw-------. 1 atlas atlas 932121102 Nov 26 19:55 /home/atlas/RunAtlas/HITS.47556161._001510.pool.root.1
2025-11-26 20:46:41 (9648): Guest Log: Successfully finished the ATLAS job!
2025-11-26 20:46:41 (9648): Guest Log: Copying the results back to the shared directory!
2025-11-26 20:46:41 (9648): Guest Log:  *** Contents of shared directory: ***
2025-11-26 20:46:41 (9648): Guest Log: total 1318228
2025-11-26 20:46:41 (9648): Guest Log: -rwxrwxrwx. 1 root root 411082925 Nov 26 11:14 ATLAS.root_0
2025-11-26 20:46:41 (9648): Guest Log: -rwxrwxrwx. 1 root root 932121102 Nov 26 19:46 HITS.pool.root.1
2025-11-26 20:46:41 (9648): Guest Log: -rwxrwxrwx. 1 root root      9128 Nov 26 11:14 init_data.xml
2025-11-26 20:46:41 (9648): Guest Log: -rwxrwxrwx. 1 root root    590103 Nov 26 11:12 input.tar.gz
2025-11-26 20:46:41 (9648): Guest Log: -rwxrwxrwx. 1 root root   6031360 Nov 26 19:46 result.tar.gz
2025-11-26 20:46:41 (9648): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 26 11:12 start_atlas.sh
2025-11-26 20:46:41 (9648): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-26 20:46:41 (9648): VM Completion File Detected.
2025-11-26 20:46:41 (9648): Powering off VM.
2025-11-26 20:46:42 (9648): Successfully stopped VM.
2025-11-26 20:46:42 (9648): Deregistering VM. (boinc_d7237bf11c8c507f, slot#3)
2025-11-26 20:46:42 (9648): Removing network bandwidth throttle group from VM.
2025-11-26 20:46:42 (9648): Removing VM from VirtualBox.
2025-11-26 20:46:47 (9648): called boinc_finish(0)

</stderr_txt>
]]>

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