Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:48:03 (2503719): wrapper (7.7.26015): starting
15:48:03 (2503719): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 15:48:03] Arguments: --nthreads 12
[2025-11-26 15:48:03] Threads: 12
[2025-11-26 15:48:03] Checking for CVMFS
[2025-11-26 15:48:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 15:48:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 15:48:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 15:48:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 15:48:04] 2.13.3.0 13543 7162 92228 153324 1 81 2364384 4097024 1044 130560 0 5571298 99.939 564868 18453 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-26 15:48:04] CVMFS is ok
[2025-11-26 15:48:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 15:48:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 15:48:04] Further information can be found at the LHC@home message board.
[2025-11-26 15:48:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 15:48:04] Checking for apptainer binary...
[2025-11-26 15:48:04] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-26 15:48:04] apptainer is not installed, using version from CVMFS
[2025-11-26 15:48:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 15:48:04] pckelar5.cern.ch
[2025-11-26 15:48:04] apptainer works
[2025-11-26 15:48:04] Set ATHENA_PROC_NUMBER=12
[2025-11-26 15:48:04] Set ATHENA_CORE_NUMBER=12
[2025-11-26 15:48:04] Starting ATLAS job with PandaID=6895364652
[2025-11-26 15:48:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:56:37]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:56:37] 2025-11-27 02:56:03,630 | INFO     | time since job start (43669s) is within the limit (172800.0s)
[2025-11-27 03:56:37] 2025-11-27 02:56:04,608 | INFO     | monitor loop #3078: job 0:6895364652 is in state 'finished'
[2025-11-27 03:56:37] 2025-11-27 02:56:04,608 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:56:37] 2025-11-27 02:56:05,081 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 03:56:37] 2025-11-27 02:56:05,086 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2833.4746666666665
[2025-11-27 03:56:37] 2025-11-27 02:56:05,091 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6895364652/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 03:56:37] 2025-11-27 02:56:05,091 | INFO     | extracted standard info from prmon json
[2025-11-27 03:56:37] 2025-11-27 02:56:05,091 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 03:56:37] 2025-11-27 02:56:05,092 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:56:37] 2025-11-27 02:56:05,111 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:56:37] 2025-11-27 02:56:05,112 | INFO     | sum of square deviations: 113819192902.68562
[2025-11-27 03:56:37] 2025-11-27 02:56:05,129 | INFO     | sum of deviations: 1451545165318.4968
[2025-11-27 03:56:37] 2025-11-27 02:56:05,130 | INFO     | mean x: 1764190333.4790504
[2025-11-27 03:56:37] 2025-11-27 02:56:05,130 | INFO     | mean y: 3536387.7332402235
[2025-11-27 03:56:37] 2025-11-27 02:56:05,130 | INFO     | intersect: -22495322407.132793
[2025-11-27 03:56:37] 2025-11-27 02:56:05,131 | INFO     | chi2: 6.1673820603603176
[2025-11-27 03:56:37] 2025-11-27 02:56:05,132 | INFO     | sum of square deviations: 111451529747.8592
[2025-11-27 03:56:37] 2025-11-27 02:56:05,149 | INFO     | sum of deviations: 1733935044866.8518
[2025-11-27 03:56:37] 2025-11-27 02:56:05,150 | INFO     | mean x: 1764190180.9859352
[2025-11-27 03:56:37] 2025-11-27 02:56:05,150 | INFO     | mean y: 3554562.5850914204
[2025-11-27 03:56:37] 2025-11-27 02:56:05,150 | INFO     | intersect: -27443275351.20768
[2025-11-27 03:56:37] 2025-11-27 02:56:05,151 | INFO     | chi2: 3.160060246980876
[2025-11-27 03:56:37] 2025-11-27 02:56:05,151 | INFO     | current chi2=3.160060246980876 (change=48.761723920242176 %)
[2025-11-27 03:56:37] 2025-11-27 02:56:05,152 | INFO     | sum of square deviations: 109116936980.46454
[2025-11-27 03:56:37] 2025-11-27 02:56:05,169 | INFO     | sum of deviations: 1830998412477.8896
[2025-11-27 03:56:37] 2025-11-27 02:56:05,169 | INFO     | mean x: 1764190028.4929178
[2025-11-27 03:56:37] 2025-11-27 02:56:05,169 | INFO     | mean y: 3560893.077903683
[2025-11-27 03:56:37] 2025-11-27 02:56:05,170 | INFO     | intersect: -29599809865.56217
[2025-11-27 03:56:37] 2025-11-27 02:56:05,171 | INFO     | chi2: 2.6075305194961365
[2025-11-27 03:56:37] 2025-11-27 02:56:05,171 | INFO     | current chi2=2.6075305194961365 (change=17.48478460221215 %)
[2025-11-27 03:56:37] 2025-11-27 02:56:05,171 | INFO     | right removable region: 705
[2025-11-27 03:56:37] 2025-11-27 02:56:05,172 | INFO     | sum of square deviations: 111451145570.82977
[2025-11-27 03:56:37] 2025-11-27 02:56:05,189 | INFO     | sum of deviations: 1199508257112.2192
[2025-11-27 03:56:37] 2025-11-27 02:56:05,189 | INFO     | mean x: 1764190485.9845288
[2025-11-27 03:56:37] 2025-11-27 02:56:05,190 | INFO     | mean y: 3552593.565400844
[2025-11-27 03:56:37] 2025-11-27 02:56:05,190 | INFO     | intersect: -18983789745.705505
[2025-11-27 03:56:37] 2025-11-27 02:56:05,191 | INFO     | chi2: 3.8252130904784316
[2025-11-27 03:56:37] 2025-11-27 02:56:05,191 | INFO     | current chi2=3.8252130904784316 (change=37.97671276011477 %)
[2025-11-27 03:56:37] 2025-11-27 02:56:05,192 | INFO     | sum of square deviations: 109116342358.32892
[2025-11-27 03:56:37] 2025-11-27 02:56:05,209 | INFO     | sum of deviations: 1128349733584.1995
[2025-11-27 03:56:37] 2025-11-27 02:56:05,209 | INFO     | mean x: 1764190638.4844193
[2025-11-27 03:56:37] 2025-11-27 02:56:05,209 | INFO     | mean y: 3557240.154390935
[2025-11-27 03:56:37] 2025-11-27 02:56:05,209 | INFO     | intersect: -18239576592.068382
[2025-11-27 03:56:37] 2025-11-27 02:56:05,210 | INFO     | chi2: 3.7543994946242294
[2025-11-27 03:56:37] 2025-11-27 02:56:05,210 | INFO     | current chi2=3.7543994946242294 (change=1.8512327072828596 %)
[2025-11-27 03:56:37] 2025-11-27 02:56:05,211 | INFO     | left removable region: 20
[2025-11-27 03:56:37] 2025-11-27 02:56:05,212 | INFO     | sum of square deviations: 99666501270.0
[2025-11-27 03:56:37] 2025-11-27 02:56:05,227 | INFO     | sum of deviations: 1413472004871.0051
[2025-11-27 03:56:37] 2025-11-27 02:56:05,228 | INFO     | mean x: 1764190608.0
[2025-11-27 03:56:37] 2025-11-27 02:56:05,228 | INFO     | mean y: 3589232.775182482
[2025-11-27 03:56:37] 2025-11-27 02:56:05,228 | INFO     | intersect: -25016191775.78071
[2025-11-27 03:56:37] 2025-11-27 02:56:05,229 | INFO     | chi2: 0.1319393976634697
[2025-11-27 03:56:37] 2025-11-27 02:56:05,229 | INFO     | current memory leak: 14.18 B/s (using 685 data points, chi2=0.13)
[2025-11-27 03:56:37] 2025-11-27 02:56:05,230 | INFO     | could have reported an average CPU frequency of 2803 MHz (27 samples)
[2025-11-27 03:56:37] 2025-11-27 02:56:05,230 | INFO     | ..............................
[2025-11-27 03:56:37] 2025-11-27 02:56:05,231 | INFO     | . Timing measurements:
[2025-11-27 03:56:37] 2025-11-27 02:56:05,231 | INFO     | . get job = 0 s
[2025-11-27 03:56:37] 2025-11-27 02:56:05,231 | INFO     | . initial setup = 1 s
[2025-11-27 03:56:37] 2025-11-27 02:56:05,231 | INFO     | . payload setup = 8 s
[2025-11-27 03:56:37] 2025-11-27 02:56:05,231 | INFO     | . stage-in = 0 s
[2025-11-27 03:56:37] 2025-11-27 02:56:05,231 | INFO     | . payload execution = 43629 s
[2025-11-27 03:56:37] 2025-11-27 02:56:05,231 | INFO     | . stage-out = 2 s
[2025-11-27 03:56:37] 2025-11-27 02:56:05,232 | INFO     | . log creation = 0 s
[2025-11-27 03:56:37] 2025-11-27 02:56:05,232 | INFO     | ..............................
[2025-11-27 03:56:37] 2025-11-27 02:56:05,388 | INFO     | 
[2025-11-27 03:56:37] 2025-11-27 02:56:05,389 | INFO     | job summary report
[2025-11-27 03:56:37] 2025-11-27 02:56:05,389 | INFO     | --------------------------------------------------
[2025-11-27 03:56:37] 2025-11-27 02:56:05,389 | INFO     | PanDA job id: 6895364652
[2025-11-27 03:56:37] 2025-11-27 02:56:05,389 | INFO     | task id: 47556137
[2025-11-27 03:56:37] 2025-11-27 02:56:05,389 | INFO     | errors: (none)
[2025-11-27 03:56:37] 2025-11-27 02:56:05,390 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:56:37] 2025-11-27 02:56:05,390 | INFO     | pilot state: finished 
[2025-11-27 03:56:37] 2025-11-27 02:56:05,390 | INFO     | transexitcode: 0
[2025-11-27 03:56:37] 2025-11-27 02:56:05,390 | INFO     | exeerrorcode: 0
[2025-11-27 03:56:37] 2025-11-27 02:56:05,390 | INFO     | exeerrordiag: 
[2025-11-27 03:56:37] 2025-11-27 02:56:05,390 | INFO     | exitcode: 0
[2025-11-27 03:56:37] 2025-11-27 02:56:05,390 | INFO     | exitmsg: OK
[2025-11-27 03:56:37] 2025-11-27 02:56:05,391 | INFO     | cpuconsumptiontime: 510000 s
[2025-11-27 03:56:37] 2025-11-27 02:56:05,391 | INFO     | nevents: 1000
[2025-11-27 03:56:37] 2025-11-27 02:56:05,391 | INFO     | neventsw: 0
[2025-11-27 03:56:37] 2025-11-27 02:56:05,391 | INFO     | pid: 2515079
[2025-11-27 03:56:37] 2025-11-27 02:56:05,391 | INFO     | pgrp: 2515079
[2025-11-27 03:56:37] 2025-11-27 02:56:05,391 | INFO     | corecount: 12
[2025-11-27 03:56:37] 2025-11-27 02:56:05,392 | INFO     | event service: False
[2025-11-27 03:56:37] 2025-11-27 02:56:05,392 | INFO     | sizes: {0: 2283487, 1: 2284343, 2: 2284343, 6: 2284633, 12: 2284661, 43641: 2328888, 43642: 2329015, 43644: 2338065, 43646: 2338121, 43654: 2338367}
[2025-11-27 03:56:37] 2025-11-27 02:56:05,392 | INFO     | --------------------------------------------------
[2025-11-27 03:56:37] 2025-11-27 02:56:05,392 | INFO     | 
[2025-11-27 03:56:37] 2025-11-27 02:56:05,392 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-27 03:56:37] 2025-11-27 02:56:05,414 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:56:37] 2025-11-27 02:56:05,415 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:56:37] 2025-11-27 02:56:05,415 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:56:37] 2025-11-27 02:56:05,415 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:56:37] 2025-11-27 02:56:05,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:56:37] 2025-11-27 02:56:05,415 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:56:37] 2025-11-27 02:56:05,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:56:37] 2025-11-27 02:56:05,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:56:37] 2025-11-27 02:56:05,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:56:37] 2025-11-27 02:56:05,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:56:37] 2025-11-27 02:56:05,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:56:37] 2025-11-27 02:56:05,417 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:56:37] 2025-11-27 02:56:05,417 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:56:37] 2025-11-27 02:56:05,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:56:37] 2025-11-27 02:56:05,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:56:37] 2025-11-27 02:56:05,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:56:37] 2025-11-27 02:56:05,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:56:37] 2025-11-27 02:56:05,417 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:56:37] 2025-11-27 02:56:05,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:56:37] 2025-11-27 02:56:05,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:56:37] 2025-11-27 02:56:05,418 | INFO     | job 6895364652 has completed (purged errors)
[2025-11-27 03:56:37] 2025-11-27 02:56:05,418 | INFO     | overall cleanup function is called
[2025-11-27 03:56:37] 2025-11-27 02:56:06,442 | INFO     | --- collectZombieJob: --- 10, [2515079]
[2025-11-27 03:56:37] 2025-11-27 02:56:06,442 | INFO     | zombie collector waiting for pid 2515079
[2025-11-27 03:56:37] 2025-11-27 02:56:06,442 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:56:37] 2025-11-27 02:56:06,443 | INFO     | collected zombie processes
[2025-11-27 03:56:37] 2025-11-27 02:56:06,443 | INFO     | will attempt to kill all subprocesses of pid=2515079
[2025-11-27 03:56:37] 2025-11-27 02:56:06,637 | INFO     | process IDs to be killed: [2515079] (in reverse order)
[2025-11-27 03:56:37] 2025-11-27 02:56:06,701 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:56:37] 2025-11-27 02:56:06,701 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:56:37] 2025-11-27 02:56:06,709 | INFO     | did not find any defunct processes belonging to 2515079
[2025-11-27 03:56:37] 2025-11-27 02:56:06,715 | INFO     | did not find any defunct processes belonging to 2515079
[2025-11-27 03:56:37] 2025-11-27 02:56:06,717 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:56:37] 2025-11-27 02:56:06,717 | INFO     | ready for new job
[2025-11-27 03:56:37] 2025-11-27 02:56:06,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:56:37] 2025-11-27 02:56:06,721 | INFO     | ***************************************
[2025-11-27 03:56:37] 2025-11-27 02:56:06,721 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:56:37] 2025-11-27 02:56:06,721 | INFO     | ***************************************
[2025-11-27 03:56:37] 2025-11-27 02:56:06,721 | INFO     | 
[2025-11-27 03:56:37] 2025-11-27 02:56:06,723 | INFO     | architecture information:
[2025-11-27 03:56:37] 2025-11-27 02:56:06,723 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:56:37] 2025-11-27 02:56:06,738 | INFO     | cat /etc/os-release:
[2025-11-27 03:56:37] NAME="CentOS Linux"
[2025-11-27 03:56:37] VERSION="7 (Core)"
[2025-11-27 03:56:37] ID="centos"
[2025-11-27 03:56:37] ID_LIKE="rhel fedora"
[2025-11-27 03:56:37] VERSION_ID="7"
[2025-11-27 03:56:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:56:37] ANSI_COLOR="0;31"
[2025-11-27 03:56:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:56:37] HOME_URL="https://www.centos.org/"
[2025-11-27 03:56:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:56:37] 
[2025-11-27 03:56:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:56:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:56:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:56:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:56:37] 
[2025-11-27 03:56:37] 2025-11-27 02:56:06,738 | INFO     | ***************************************
[2025-11-27 03:56:37] 2025-11-27 02:56:07,241 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-27 03:56:37] 2025-11-27 02:56:07,258 | INFO     | sufficient remaining disk space (1815152164864 B)
[2025-11-27 03:56:37] 2025-11-27 02:56:07,258 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:56:37] 2025-11-27 02:56:07,258 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:56:37] 2025-11-27 02:56:07,258 | INFO     | update_server=False
[2025-11-27 03:56:37] 2025-11-27 02:56:07,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:56:37] 2025-11-27 02:56:07,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:56:37] 2025-11-27 02:56:08,117 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:56:37] 2025-11-27 02:56:08,117 | INFO     | aborting loop
[2025-11-27 03:56:37] 2025-11-27 02:56:08,181 | INFO     | all data control threads have been joined
[2025-11-27 03:56:37] 2025-11-27 02:56:08,192 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:56:37] 2025-11-27 02:56:08,264 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:56:37] 2025-11-27 02:56:08,265 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:56:37] 2025-11-27 02:56:08,317 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:56:37] 2025-11-27 02:56:08,351 | INFO     | all payload control threads have been joined
[2025-11-27 03:56:37] 2025-11-27 02:56:08,501 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:56:37] 2025-11-27 02:56:08,551 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:56:37] 2025-11-27 02:56:08,618 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:56:37] 2025-11-27 02:56:08,669 | INFO     | all job control threads have been joined
[2025-11-27 03:56:37] 2025-11-27 02:56:08,677 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:56:37] 2025-11-27 02:56:08,759 | INFO     | [job] validate thread has finished
[2025-11-27 03:56:37] 2025-11-27 02:56:09,095 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:56:37] 2025-11-27 02:56:09,123 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:56:37] 2025-11-27 02:56:09,186 | INFO     | [data] control thread has finished
[2025-11-27 03:56:37] 2025-11-27 02:56:09,297 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:56:37] 2025-11-27 02:56:09,357 | INFO     | [payload] control thread has finished
[2025-11-27 03:56:37] 2025-11-27 02:56:09,674 | INFO     | [job] control thread has finished
[2025-11-27 03:56:37] 2025-11-27 02:56:09,825 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:56:37] 2025-11-27 02:56:10,507 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:56:37] 2025-11-27 02:56:12,198 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:56:37] 2025-11-27 02:56:27,267 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:56:37] 2025-11-27 02:56:28,269 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140486608283456)>', '<ExcThread(monitor, started 140486048192256)>']
[2025-11-27 03:56:37] 2025-11-27 02:56:33,295 | INFO     | all workflow threads have been joined
[2025-11-27 03:56:37] 2025-11-27 02:56:33,295 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:56:37] 2025-11-27 02:56:33,295 | INFO     | traces error code: 0
[2025-11-27 03:56:37] 2025-11-27 02:56:33,296 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:56:37] 2025-11-27 02:56:36,948 | INFO     | PID=2507578 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 03:56:37] 2025-11-27 02:56:36,948 | INFO     | .. there are 2 such processes running
[2025-11-27 03:56:37] 2025-11-27 02:56:36,949 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:56:37] 2025-11-27 02:56:36,949 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:56:37] 2025-11-27 02:56:36,949 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:56:37] 2025-11-27 02:56:36,949 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:56:37] 2025-11-27 02:56:36,950 | INFO     | [monitor] control thread has ended
[2025-11-27 03:56:37] 2025-11-27 02:56:37,068 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:56:37] 2025-11-27 02:56:37,071 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:56:37] 2025-11-27 02:56:37,074 [wrapper] pilotpid: 2507578
[2025-11-27 03:56:37] 2025-11-27 02:56:37,076 [wrapper] Pilot exit status: 0
[2025-11-27 03:56:37] 2025-11-27 02:56:37,086 [wrapper] pandaids: 6895364652
[2025-11-27 03:56:37] 2025-11-27 02:56:37,123 [wrapper] cleanup supervisor_pilot 2750330 2507579
[2025-11-27 03:56:37] 2025-11-27 02:56:37,125 [wrapper] Test setup, not cleaning
[2025-11-27 03:56:37] 2025-11-27 02:56:37,128 [wrapper] apfmon messages muted
[2025-11-27 03:56:37] 2025-11-27 02:56:37,131 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:56:37] 2025-11-27 02:56:37,133 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:56:37]  *** Error codes and diagnostics ***
[2025-11-27 03:56:37]     "exeErrorCode": 0,
[2025-11-27 03:56:37]     "exeErrorDiag": "",
[2025-11-27 03:56:37]     "pilotErrorCode": 0,
[2025-11-27 03:56:37]     "pilotErrorDiag": "",
[2025-11-27 03:56:37]  *** Listing of results directory ***
[2025-11-27 03:56:37] total 1327144
[2025-11-27 03:56:37] -rw-r--r-- 1 boinc boinc    576529 Nov 23 17:03 pilot3.tar.gz
[2025-11-27 03:56:37] -rw-r--r-- 1 boinc boinc      5112 Nov 23 17:06 queuedata.json
[2025-11-27 03:56:37] -rwx------ 1 boinc boinc     36292 Nov 23 17:08 runpilot2-wrapper.sh
[2025-11-27 03:56:37] -rw-r--r-- 1 boinc boinc       100 Nov 26 15:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:56:37] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 15:48 run_atlas
[2025-11-27 03:56:37] -rw-r--r-- 1 boinc boinc       105 Nov 26 15:48 job.xml
[2025-11-27 03:56:37] -rw-r--r-- 1 boinc boinc      6296 Nov 26 15:48 init_data.xml
[2025-11-27 03:56:37] -rw-r--r-- 2 boinc boinc 410431774 Nov 26 15:48 EVNT.47483658._000812.pool.root.1
[2025-11-27 03:56:37] -rw-r--r-- 2 boinc boinc     15847 Nov 26 15:48 start_atlas.sh
[2025-11-27 03:56:37] drwxrwx--x 2 boinc boinc        68 Nov 26 15:48 shared
[2025-11-27 03:56:37] -rw-r--r-- 2 boinc boinc    590103 Nov 26 15:48 input.tar.gz
[2025-11-27 03:56:37] -rw-r--r-- 1 boinc boinc         0 Nov 26 15:48 boinc_lockfile
[2025-11-27 03:56:37] -rw-r--r-- 1 boinc boinc      2786 Nov 26 15:48 pandaJob.out
[2025-11-27 03:56:37] -rw------- 1 boinc boinc    992360 Nov 26 15:48 agis_schedconf.cvmfs.json
[2025-11-27 03:56:37] drwx------ 5 boinc boinc      4096 Nov 26 15:48 pilot3
[2025-11-27 03:56:37] -rw-r--r-- 1 boinc boinc       533 Nov 27 03:44 boinc_task_state.xml
[2025-11-27 03:56:37] -rw------- 1 boinc boinc 927748556 Nov 27 03:55 HITS.47556137._007988.pool.root.1
[2025-11-27 03:56:37] -rw------- 1 boinc boinc      1038 Nov 27 03:55 memory_monitor_summary.json
[2025-11-27 03:56:37] -rw------- 1 boinc boinc   1516240 Nov 27 03:55 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:56:37] -rw------- 1 boinc boinc   2416220 Nov 27 03:55 log.47556137._007988.job.log.tgz.1
[2025-11-27 03:56:37] -rw------- 1 boinc boinc      8608 Nov 27 03:56 heartbeat.json
[2025-11-27 03:56:37] -rw-r--r-- 1 boinc boinc        29 Nov 27 03:56 wrapper_checkpoint.txt
[2025-11-27 03:56:37] -rw------- 1 boinc boinc        95 Nov 27 03:56 pilot_heartbeat.json
[2025-11-27 03:56:37] -rw------- 1 boinc boinc       822 Nov 27 03:56 pilotlog.txt
[2025-11-27 03:56:37] -rw-r--r-- 1 boinc boinc      8192 Nov 27 03:56 boinc_mmap_file
[2025-11-27 03:56:37] -rw------- 1 boinc boinc   6039318 Nov 27 03:56 log.47556137._007988.job.log.1
[2025-11-27 03:56:37] -rw------- 1 boinc boinc       353 Nov 27 03:56 output.list
[2025-11-27 03:56:37] -rw-r--r-- 1 boinc boinc       620 Nov 27 03:56 runtime_log
[2025-11-27 03:56:37] -rw------- 1 boinc boinc   8478720 Nov 27 03:56 result.tar.gz
[2025-11-27 03:56:37] -rw-r--r-- 1 boinc boinc      8842 Nov 27 03:56 runtime_log.err
[2025-11-27 03:56:37] -rw------- 1 boinc boinc       665 Nov 27 03:56 QlwNDmtoRh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmudIKDmiUEoRo.diag
[2025-11-27 03:56:37] -rw-r--r-- 1 boinc boinc     21465 Nov 27 03:56 stderr.txt
[2025-11-27 03:56:37] HITS file was successfully produced:
[2025-11-27 03:56:37] -rw------- 1 boinc boinc 927748556 Nov 27 03:55 shared/HITS.pool.root.1
[2025-11-27 03:56:37]  *** Contents of shared directory: ***
[2025-11-27 03:56:37] total 1315700
[2025-11-27 03:56:37] -rw-r--r-- 2 boinc boinc 410431774 Nov 26 15:48 ATLAS.root_0
[2025-11-27 03:56:37] -rw-r--r-- 2 boinc boinc     15847 Nov 26 15:48 start_atlas.sh
[2025-11-27 03:56:37] -rw-r--r-- 2 boinc boinc    590103 Nov 26 15:48 input.tar.gz
[2025-11-27 03:56:37] -rw------- 1 boinc boinc 927748556 Nov 27 03:55 HITS.pool.root.1
[2025-11-27 03:56:37] -rw------- 1 boinc boinc   8478720 Nov 27 03:56 result.tar.gz
03:56:39 (2503719): run_atlas exited; CPU time 510167.958259
03:56:39 (2503719): called boinc_finish(0)

</stderr_txt>
]]>

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