Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-27 07:21:32 (1792): vboxwrapper version 26210
2025-11-27 07:21:32 (1792): BOINC client version: 7.24.1
2025-11-27 07:21:33 (1792): Detected: VirtualBox VboxManage Interface (Version: 7.0.10)
2025-11-27 07:21:33 (1792): Successfully copied 'init_data.xml' to the shared directory.
2025-11-27 07:21:33 (1792): Create VM. (boinc_08400b0940df996c, slot#0)
2025-11-27 07:21:34 (1792): Setting Memory Size for VM. (4800MB)
2025-11-27 07:21:34 (1792): Setting CPU Count for VM. (8)
2025-11-27 07:21:34 (1792): Setting Chipset Options for VM.
2025-11-27 07:21:35 (1792): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-27 07:21:35 (1792): Setting Boot Options for VM.
2025-11-27 07:21:35 (1792): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-27 07:21:36 (1792): Enabling VM Network Access.
2025-11-27 07:21:36 (1792): Disabling USB Support for VM.
2025-11-27 07:21:36 (1792): Disabling COM Port Support for VM.
2025-11-27 07:21:36 (1792): Disabling LPT Port Support for VM.
2025-11-27 07:21:37 (1792): Disabling Audio Support for VM.
2025-11-27 07:21:37 (1792): Disabling Clipboard Support for VM.
2025-11-27 07:21:37 (1792): Disabling Drag and Drop Support for VM.
2025-11-27 07:21:37 (1792): Adding storage controller(s) to VM.
2025-11-27 07:21:38 (1792): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-27 07:21:40 (1792): Adding VirtualBox Guest Additions to VM.
2025-11-27 07:21:40 (1792): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-27 07:21:40 (1792): forwarding host port 50052 to guest port 80
2025-11-27 07:21:41 (1792): Enabling remote desktop for VM.
2025-11-27 07:21:41 (1792): Required extension pack not installed, remote desktop not enabled.
2025-11-27 07:21:41 (1792): Enabling shared directory for VM.
2025-11-27 07:21:41 (1792): Starting VM using VBoxManage interface. (boinc_08400b0940df996c, slot#0)
2025-11-27 07:21:47 (1792): Successfully started VM. (PID = '12136')
2025-11-27 07:21:47 (1792): Reporting VM Process ID to BOINC.
2025-11-27 07:21:47 (1792): Guest Log: BIOS: VirtualBox 7.0.10
2025-11-27 07:21:47 (1792): Guest Log: CPUID EDX: 0x178bfbff
2025-11-27 07:21:47 (1792): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-27 07:21:47 (1792): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-27 07:21:47 (1792): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-27 07:21:47 (1792): Detected: Web Application Enabled (http://localhost:50052)
2025-11-27 07:21:47 (1792): Preference change detected
2025-11-27 07:21:47 (1792): Setting CPU throttle for VM. (100%)
2025-11-27 07:21:47 (1792): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-27 07:21:49 (1792): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-27 07:21:49 (1792): Guest Log: BIOS: Booting from Hard Disk...
2025-11-27 07:21:51 (1792): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-27 07:21:51 (1792): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-27 07:21:51 (1792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-27 07:21:59 (1792): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-27 07:21:59 (1792): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-27 07:22:03 (1792): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-27 07:22:03 (1792): Guest Log: 00:00:00.000135 main     Log opened 2025-11-27T07:22:01.035677000Z
2025-11-27 07:22:03 (1792): Guest Log: 00:00:00.000215 main     OS Product: Linux
2025-11-27 07:22:03 (1792): Guest Log: 00:00:00.000238 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-27 07:22:03 (1792): Guest Log: 00:00:00.000262 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-27 07:22:03 (1792): Guest Log: 00:00:00.000282 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-27 07:22:03 (1792): Guest Log: 00:00:00.000282 main     Process ID: 1370
2025-11-27 07:22:03 (1792): Guest Log: 00:00:00.000283 main     Package type: LINUX_64BITS_GENERIC
2025-11-27 07:22:03 (1792): Guest Log: 00:00:00.001162 main     5.2.32 r132073 started. Verbose level = 0
2025-11-27 07:22:03 (1792): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-27 07:22:03 (1792): Guest Log: [INFO] Mounting shared directory
2025-11-27 07:22:03 (1792): Guest Log: [INFO] Checking for init_data.xml
2025-11-27 07:22:13 (1792): Guest Log: 00:00:10.003060 timesync vgsvcTimeSyncWorker: Radical guest time change: -32 388 176 404 000ns (GuestNow=1 764 195 732 861 576 000 ns GuestLast=1 764 228 121 037 980 000 ns fSetTimeLastLoop=true )
2025-11-27 07:22:59 (1792): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-27 07:22:59 (1792): Guest Log: [INFO] Detected branch: prod
2025-11-27 07:23:00 (1792): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-27 07:23:00 (1792): Guest Log: Copying input files
2025-11-27 07:23:01 (1792): Guest Log: Copied input files into RunAtlas.
2025-11-27 07:23:01 (1792): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-27 07:23:01 (1792): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-27 07:23:01 (1792): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-27 07:23:01 (1792): Guest Log: Further information can be found at the LHC@home message board.
2025-11-27 07:23:12 (1792): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-27 07:23:13 (1792): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-27 07:23:13 (1792): Guest Log: 2.6.3.0 1674 0 30184 153337 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-11-27 07:23:13 (1792): Guest Log: copied the webapp to /var/www
2025-11-27 07:23:13 (1792): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-27 07:23:13 (1792): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-27 07:23:15 (1792): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-27 07:23:15 (1792): Guest Log:  *** Starting ATLAS job. (PandaID=6891478770 taskID=47493049) ***
2025-11-27 09:02:30 (1792): Status Report: Elapsed Time: '6000.000000'
2025-11-27 09:02:30 (1792): Status Report: CPU Time: '35420.062500'
2025-11-27 10:43:28 (1792): Status Report: Elapsed Time: '12000.000000'
2025-11-27 10:43:28 (1792): Status Report: CPU Time: '83366.765625'
2025-11-27 12:24:25 (1792): Status Report: Elapsed Time: '18000.000000'
2025-11-27 12:24:25 (1792): Status Report: CPU Time: '131301.750000'
2025-11-27 14:05:24 (1792): Status Report: Elapsed Time: '24000.000000'
2025-11-27 14:05:24 (1792): Status Report: CPU Time: '179361.984375'
2025-11-27 15:46:24 (1792): Status Report: Elapsed Time: '30000.000000'
2025-11-27 15:46:24 (1792): Status Report: CPU Time: '227447.359375'
2025-11-27 17:27:23 (1792): Status Report: Elapsed Time: '36000.000000'
2025-11-27 17:27:23 (1792): Status Report: CPU Time: '275481.312500'
2025-11-27 19:08:21 (1792): Status Report: Elapsed Time: '42000.000000'
2025-11-27 19:08:21 (1792): Status Report: CPU Time: '323528.640625'
2025-11-27 19:47:37 (1792): Guest Log:  *** Job finished ***
2025-11-27 19:47:37 (1792): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-27 19:47:37 (1792): Guest Log: 2025-11-27 10:47:26,410 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-27 19:47:37 (1792): Guest Log: 2025-11-27 10:47:26,410 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-27 19:47:37 (1792): Guest Log: 2025-11-27 10:47:30,483 | INFO     | [monitor] cgroup control has ended
2025-11-27 19:47:37 (1792): Guest Log: 2025-11-27 10:47:32,045 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140466937730880)>', '<ExcThread(monitor, started 140466200753920)>']
2025-11-27 19:47:37 (1792): Guest Log: 2025-11-27 10:47:32,509 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-27 19:47:37 (1792): Guest Log: 2025-11-27 10:47:32,509 | INFO     | [monitor] control thread has ended
2025-11-27 19:47:37 (1792): Guest Log: 2025-11-27 10:47:37,101 | INFO     | all workflow threads have been joined
2025-11-27 19:47:37 (1792): Guest Log: 2025-11-27 10:47:37,101 | INFO     | end of generic workflow (traces error code: 0)
2025-11-27 19:47:37 (1792): Guest Log: 2025-11-27 10:47:37,101 | INFO     | traces error code: 0
2025-11-27 19:47:37 (1792): Guest Log: 2025-11-27 10:47:37,101 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-27 19:47:37 (1792): Guest Log: 2025-11-27 10:47:37,174 [wrapper] ==== pilot stdout END ====
2025-11-27 19:47:37 (1792): Guest Log: 2025-11-27 10:47:37,177 [wrapper] ==== wrapper stdout RESUME ====
2025-11-27 19:47:37 (1792): Guest Log: 2025-11-27 10:47:37,180 [wrapper] pilotpid: 6122
2025-11-27 19:47:37 (1792): Guest Log: 2025-11-27 10:47:37,184 [wrapper] Pilot exit status: 0
2025-11-27 19:47:37 (1792): Guest Log: 2025-11-27 10:47:37,194 [wrapper] pandaids: 6891478770
2025-11-27 19:47:37 (1792): Guest Log: 2025-11-27 10:47:37,219 [wrapper] cleanup supervisor_pilot 23080 6123
2025-11-27 19:47:37 (1792): Guest Log: 2025-11-27 10:47:37,226 [wrapper] Test setup, not cleaning
2025-11-27 19:47:37 (1792): Guest Log: 2025-11-27 10:47:37,230 [wrapper] apfmon messages muted
2025-11-27 19:47:37 (1792): Guest Log: 2025-11-27 10:47:37,233 [wrapper] ==== wrapper stdout END ====
2025-11-27 19:47:37 (1792): Guest Log: 2025-11-27 10:47:37,236 [wrapper] ==== wrapper stderr END ====
2025-11-27 19:47:37 (1792): Guest Log:  *** Error codes and diagnostics ***
2025-11-27 19:47:37 (1792): Guest Log:     "exeErrorCode": 0,
2025-11-27 19:47:37 (1792): Guest Log:     "exeErrorDiag": "",
2025-11-27 19:47:37 (1792): Guest Log:     "pilotErrorCode": 0,
2025-11-27 19:47:37 (1792): Guest Log:     "pilotErrorDiag": "",
2025-11-27 19:47:37 (1792): Guest Log:  *** Listing of results directory ***
2025-11-27 19:47:37 (1792): Guest Log: total 929344
2025-11-27 19:47:37 (1792): Guest Log: -rw-r--r--. 1 atlas atlas    598293 Nov  6 08:41 pilot3.tar.gz
2025-11-27 19:47:37 (1792): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 18 12:54 runpilot2-wrapper.sh
2025-11-27 19:47:37 (1792): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 18 12:54 queuedata.json
2025-11-27 19:47:37 (1792): Guest Log: -rwxr-xr-x. 1 atlas atlas      6093 Nov 26 22:23 init_data.xml
2025-11-27 19:47:37 (1792): Guest Log: -rwxr-xr-x. 1 atlas atlas    611266 Nov 26 22:23 input.tar.gz
2025-11-27 19:47:37 (1792): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Nov 26 22:23 start_atlas.sh
2025-11-27 19:47:37 (1792): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 26 22:23 EVNT.47493047._000009.pool.root.1 -> /data/./ATLAS.root_0
2025-11-27 19:47:37 (1792): Guest Log: -rw-r--r--. 1 atlas atlas      2769 Nov 26 22:23 pandaJob.out
2025-11-27 19:47:37 (1792): Guest Log: -rw-------. 1 atlas atlas    991546 Nov 26 22:26 agis_schedconf.cvmfs.json
2025-11-27 19:47:37 (1792): Guest Log: drwx------. 7 atlas atlas      4096 Nov 26 22:26 pilot3
2025-11-27 19:47:37 (1792): Guest Log: -rw-------. 1 atlas atlas 932190182 Nov 27 10:46 HITS.47493049._000028.pool.root.1
2025-11-27 19:47:37 (1792): Guest Log: -rw-------. 1 atlas atlas      1044 Nov 27 10:46 memory_monitor_summary.json
2025-11-27 19:47:37 (1792): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 27 10:46 agis_ddmendpoints.agis.ALL.json
2025-11-27 19:47:37 (1792): Guest Log: -rw-------. 1 atlas atlas   1951321 Nov 27 10:46 log.47493049._000028.job.log.tgz.1
2025-11-27 19:47:37 (1792): Guest Log: -rw-------. 1 atlas atlas        95 Nov 27 10:46 pilot_heartbeat.json
2025-11-27 19:47:37 (1792): Guest Log: -rw-------. 1 atlas atlas      8667 Nov 27 10:46 heartbeat.json
2025-11-27 19:47:37 (1792): Guest Log: -rw-------. 1 atlas atlas      4991 Nov 27 10:47 pilotlog.txt
2025-11-27 19:47:37 (1792): Guest Log: -rw-------. 1 atlas atlas   5834919 Nov 27 10:47 log.47493049._000028.job.log.1
2025-11-27 19:47:37 (1792): Guest Log: -rw-------. 1 atlas atlas       353 Nov 27 10:47 output.list
2025-11-27 19:47:37 (1792): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 27 10:47 runtime_log
2025-11-27 19:47:37 (1792): Guest Log: -rw-------. 1 atlas atlas   7802880 Nov 27 10:47 result.tar.gz
2025-11-27 19:47:37 (1792): Guest Log: -rw-r--r--. 1 atlas atlas      8652 Nov 27 10:47 runtime_log.err
2025-11-27 19:47:37 (1792): Guest Log: -rw-------. 1 atlas atlas       666 Nov 27 10:47 d3ZLDmPPaf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwBFKDm8kItnn.diag
2025-11-27 19:47:37 (1792): Guest Log: Looking for outputfile HITS.47493049._000028.pool.root.1
2025-11-27 19:47:37 (1792): Guest Log: HITS file was successfully produced
2025-11-27 19:47:37 (1792): Guest Log: -rw-------. 1 atlas atlas 932190182 Nov 27 10:46 /home/atlas/RunAtlas/HITS.47493049._000028.pool.root.1
2025-11-27 19:47:39 (1792): Guest Log: Successfully finished the ATLAS job!
2025-11-27 19:47:39 (1792): Guest Log: Copying the results back to the shared directory!
2025-11-27 19:47:39 (1792): Guest Log:  *** Contents of shared directory: ***
2025-11-27 19:47:39 (1792): Guest Log: total 1319744
2025-11-27 19:47:39 (1792): Guest Log: -rwxrwxrwx. 1 root root 410782493 Nov 26 22:21 ATLAS.root_0
2025-11-27 19:47:39 (1792): Guest Log: -rwxrwxrwx. 1 root root 932190182 Nov 27 10:47 HITS.pool.root.1
2025-11-27 19:47:39 (1792): Guest Log: -rwxrwxrwx. 1 root root      6093 Nov 26 22:21 init_data.xml
2025-11-27 19:47:39 (1792): Guest Log: -rwxrwxrwx. 1 root root    611266 Nov 26 11:27 input.tar.gz
2025-11-27 19:47:39 (1792): Guest Log: -rwxrwxrwx. 1 root root   7802880 Nov 27 10:47 result.tar.gz
2025-11-27 19:47:39 (1792): Guest Log: -rwxrwxrwx. 1 root root     15120 Nov 26 11:27 start_atlas.sh
2025-11-27 19:47:39 (1792): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-27 19:47:40 (1792): VM Completion File Detected.
2025-11-27 19:47:40 (1792): Powering off VM.
2025-11-27 19:47:41 (1792): Successfully stopped VM.
2025-11-27 19:47:41 (1792): Deregistering VM. (boinc_08400b0940df996c, slot#0)
2025-11-27 19:47:41 (1792): Removing network bandwidth throttle group from VM.
2025-11-27 19:47:41 (1792): Removing VM from VirtualBox.
2025-11-27 19:47:46 (1792): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN