Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:30:39 (1023): wrapper (7.7.26015): starting
06:30:39 (1023): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 06:30:39] Arguments: --nthreads 12
[2025-11-26 06:30:39] Threads: 12
[2025-11-26 06:30:39] Checking for CVMFS
[2025-11-26 06:30:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 06:30:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 06:30:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 06:30:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 06:30:40] 2.11.2.0 14820 142968 93176 153320 1 81 18820414 20275201 1 130560 0 69541617 99.955 6200168 36382 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 06:30:40] CVMFS is ok
[2025-11-26 06:30:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 06:30:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 06:30:40] Further information can be found at the LHC@home message board.
[2025-11-26 06:30:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 06:30:40] Checking for apptainer binary...
[2025-11-26 06:30:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 06:30:40] Running /usr/bin/apptainer --version
[2025-11-26 06:30:40] apptainer version 1.3.2-1.el7
[2025-11-26 06:30:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 06:30:41] c-205-27.aglt2.org
[2025-11-26 06:30:41] apptainer works
[2025-11-26 06:30:41] Set ATHENA_PROC_NUMBER=12
[2025-11-26 06:30:41] Set ATHENA_CORE_NUMBER=12
[2025-11-26 06:30:41] Starting ATLAS job with PandaID=6896989992
[2025-11-26 06:30:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 13:38:45]  *** The last 200 lines of the pilot log: ***
[2025-11-26 13:38:45] 2025-11-26 18:37:58,090 | INFO     | time since job start (25621s) is within the limit (172800.0s)
[2025-11-26 13:38:45] 2025-11-26 18:38:00,096 | INFO     | time since job start (25623s) is within the limit (172800.0s)
[2025-11-26 13:38:45] 2025-11-26 18:38:00,392 | INFO     | monitor loop #1919: job 0:6896989992 is in state 'finished'
[2025-11-26 13:38:45] 2025-11-26 18:38:00,393 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 13:38:45] 2025-11-26 18:38:00,408 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 13:38:45] 2025-11-26 18:38:00,412 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1751.25
[2025-11-26 13:38:45] 2025-11-26 18:38:00,415 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896989992/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 13:38:45] 2025-11-26 18:38:00,416 | INFO     | extracted standard info from prmon json
[2025-11-26 13:38:45] 2025-11-26 18:38:00,416 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 13:38:45] 2025-11-26 18:38:00,416 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 13:38:45] 2025-11-26 18:38:00,423 | INFO     | fitting pss+swap vs Time
[2025-11-26 13:38:45] 2025-11-26 18:38:00,424 | INFO     | sum of square deviations: 22973440050.711815
[2025-11-26 13:38:45] 2025-11-26 18:38:00,427 | INFO     | sum of deviations: 339135282702.0668
[2025-11-26 13:38:45] 2025-11-26 18:38:00,427 | INFO     | mean x: 1764169466.7595239
[2025-11-26 13:38:45] 2025-11-26 18:38:00,428 | INFO     | mean y: 3417435.7333333334
[2025-11-26 13:38:45] 2025-11-26 18:38:00,428 | INFO     | intersect: -26039356720.99588
[2025-11-26 13:38:45] 2025-11-26 18:38:00,428 | INFO     | chi2: 6.6034146551169455
[2025-11-26 13:38:45] 2025-11-26 18:38:00,429 | INFO     | sum of square deviations: 22162723210.371014
[2025-11-26 13:38:45] 2025-11-26 18:38:00,432 | INFO     | sum of deviations: 511135051935.1498
[2025-11-26 13:38:45] 2025-11-26 18:38:00,433 | INFO     | mean x: 1764169314.2626505
[2025-11-26 13:38:45] 2025-11-26 18:38:00,433 | INFO     | mean y: 3449761.209638554
[2025-11-26 13:38:45] 2025-11-26 18:38:00,433 | INFO     | intersect: -40683281986.9031
[2025-11-26 13:38:45] 2025-11-26 18:38:00,433 | INFO     | chi2: 3.183312979426473
[2025-11-26 13:38:45] 2025-11-26 18:38:00,434 | INFO     | current chi2=3.183312979426473 (change=51.792926149810334 %)
[2025-11-26 13:38:45] 2025-11-26 18:38:00,434 | INFO     | sum of square deviations: 21371309057.521984
[2025-11-26 13:38:45] 2025-11-26 18:38:00,438 | INFO     | sum of deviations: 561086876689.0294
[2025-11-26 13:38:45] 2025-11-26 18:38:00,438 | INFO     | mean x: 1764169161.7658536
[2025-11-26 13:38:45] 2025-11-26 18:38:00,438 | INFO     | mean y: 3459328.687804878
[2025-11-26 13:38:45] 2025-11-26 18:38:00,438 | INFO     | intersect: -46313411681.04153
[2025-11-26 13:38:45] 2025-11-26 18:38:00,439 | INFO     | chi2: 2.600725628980559
[2025-11-26 13:38:45] 2025-11-26 18:38:00,439 | INFO     | current chi2=2.600725628980559 (change=18.301290329010538 %)
[2025-11-26 13:38:45] 2025-11-26 18:38:00,439 | INFO     | right removable region: 409
[2025-11-26 13:38:45] 2025-11-26 18:38:00,439 | INFO     | sum of square deviations: 22162656720.371006
[2025-11-26 13:38:45] 2025-11-26 18:38:00,443 | INFO     | sum of deviations: 195311588225.61176
[2025-11-26 13:38:45] 2025-11-26 18:38:00,443 | INFO     | mean x: 1764169619.2626505
[2025-11-26 13:38:45] 2025-11-26 18:38:00,443 | INFO     | mean y: 3444412.4072289155
[2025-11-26 13:38:45] 2025-11-26 18:38:00,443 | INFO     | intersect: -15543553160.354574
[2025-11-26 13:38:45] 2025-11-26 18:38:00,444 | INFO     | chi2: 4.159355208699062
[2025-11-26 13:38:45] 2025-11-26 18:38:00,444 | INFO     | current chi2=4.159355208699062 (change=37.01205473328858 %)
[2025-11-26 13:38:45] 2025-11-26 18:38:00,444 | INFO     | sum of square deviations: 21371176077.521984
[2025-11-26 13:38:45] 2025-11-26 18:38:00,448 | INFO     | sum of deviations: 163210404083.78546
[2025-11-26 13:38:45] 2025-11-26 18:38:00,448 | INFO     | mean x: 1764169771.7658536
[2025-11-26 13:38:45] 2025-11-26 18:38:00,448 | INFO     | mean y: 3450590.956097561
[2025-11-26 13:38:45] 2025-11-26 18:38:00,448 | INFO     | intersect: -13469409315.202633
[2025-11-26 13:38:45] 2025-11-26 18:38:00,449 | INFO     | chi2: 4.104381878787813
[2025-11-26 13:38:45] 2025-11-26 18:38:00,449 | INFO     | current chi2=4.104381878787813 (change=1.3216791342147272 %)
[2025-11-26 13:38:45] 2025-11-26 18:38:00,449 | INFO     | left removable region: 20
[2025-11-26 13:38:45] 2025-11-26 18:38:00,450 | INFO     | sum of square deviations: 18252641263.56817
[2025-11-26 13:38:45] 2025-11-26 18:38:00,453 | INFO     | sum of deviations: 343611836702.3625
[2025-11-26 13:38:45] 2025-11-26 18:38:00,453 | INFO     | mean x: 1764169741.2750642
[2025-11-26 13:38:45] 2025-11-26 18:38:00,453 | INFO     | mean y: 3501956.501285347
[2025-11-26 13:38:45] 2025-11-26 18:38:00,453 | INFO     | intersect: -33207560283.80014
[2025-11-26 13:38:45] 2025-11-26 18:38:00,454 | INFO     | chi2: 0.032563789663628065
[2025-11-26 13:38:45] 2025-11-26 18:38:00,454 | INFO     | current memory leak: 18.83 B/s (using 389 data points, chi2=0.03)
[2025-11-26 13:38:45] 2025-11-26 18:38:00,454 | INFO     | could have reported an average CPU frequency of 2350 MHz (18 samples)
[2025-11-26 13:38:45] 2025-11-26 18:38:00,454 | INFO     | ..............................
[2025-11-26 13:38:45] 2025-11-26 18:38:00,455 | INFO     | . Timing measurements:
[2025-11-26 13:38:45] 2025-11-26 18:38:00,455 | INFO     | . get job = 0 s
[2025-11-26 13:38:45] 2025-11-26 18:38:00,455 | INFO     | . initial setup = 2 s
[2025-11-26 13:38:45] 2025-11-26 18:38:00,455 | INFO     | . payload setup = 8 s
[2025-11-26 13:38:45] 2025-11-26 18:38:00,455 | INFO     | . stage-in = 0 s
[2025-11-26 13:38:45] 2025-11-26 18:38:00,455 | INFO     | . payload execution = 25585 s
[2025-11-26 13:38:45] 2025-11-26 18:38:00,455 | INFO     | . stage-out = 3 s
[2025-11-26 13:38:45] 2025-11-26 18:38:00,455 | INFO     | . log creation = 0 s
[2025-11-26 13:38:45] 2025-11-26 18:38:00,455 | INFO     | ..............................
[2025-11-26 13:38:45] 2025-11-26 18:38:00,623 | INFO     | 
[2025-11-26 13:38:45] 2025-11-26 18:38:00,624 | INFO     | job summary report
[2025-11-26 13:38:45] 2025-11-26 18:38:00,624 | INFO     | --------------------------------------------------
[2025-11-26 13:38:45] 2025-11-26 18:38:00,624 | INFO     | PanDA job id: 6896989992
[2025-11-26 13:38:45] 2025-11-26 18:38:00,624 | INFO     | task id: 47556161
[2025-11-26 13:38:45] 2025-11-26 18:38:00,624 | INFO     | errors: (none)
[2025-11-26 13:38:45] 2025-11-26 18:38:00,625 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 13:38:45] 2025-11-26 18:38:00,625 | INFO     | pilot state: finished 
[2025-11-26 13:38:45] 2025-11-26 18:38:00,625 | INFO     | transexitcode: 0
[2025-11-26 13:38:45] 2025-11-26 18:38:00,625 | INFO     | exeerrorcode: 0
[2025-11-26 13:38:45] 2025-11-26 18:38:00,625 | INFO     | exeerrordiag: 
[2025-11-26 13:38:45] 2025-11-26 18:38:00,625 | INFO     | exitcode: 0
[2025-11-26 13:38:45] 2025-11-26 18:38:00,626 | INFO     | exitmsg: OK
[2025-11-26 13:38:45] 2025-11-26 18:38:00,626 | INFO     | cpuconsumptiontime: 293182 s
[2025-11-26 13:38:45] 2025-11-26 18:38:00,626 | INFO     | nevents: 1000
[2025-11-26 13:38:45] 2025-11-26 18:38:00,626 | INFO     | neventsw: 0
[2025-11-26 13:38:45] 2025-11-26 18:38:00,626 | INFO     | pid: 11274
[2025-11-26 13:38:45] 2025-11-26 18:38:00,626 | INFO     | pgrp: 11274
[2025-11-26 13:38:45] 2025-11-26 18:38:00,626 | INFO     | corecount: 12
[2025-11-26 13:38:45] 2025-11-26 18:38:00,627 | INFO     | event service: False
[2025-11-26 13:38:45] 2025-11-26 18:38:00,627 | INFO     | sizes: {0: 2283435, 1: 2284291, 6: 2284553, 12: 2284581, 25598: 2321762, 25602: 2330940, 25608: 2331130}
[2025-11-26 13:38:45] 2025-11-26 18:38:00,627 | INFO     | --------------------------------------------------
[2025-11-26 13:38:45] 2025-11-26 18:38:00,627 | INFO     | 
[2025-11-26 13:38:45] 2025-11-26 18:38:00,627 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 13:38:45] 2025-11-26 18:38:00,652 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 13:38:45] 2025-11-26 18:38:00,653 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 13:38:45] 2025-11-26 18:38:00,653 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 13:38:45] 2025-11-26 18:38:00,653 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 13:38:45] 2025-11-26 18:38:00,653 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 13:38:45] 2025-11-26 18:38:00,653 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 13:38:45] 2025-11-26 18:38:00,653 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 13:38:45] 2025-11-26 18:38:00,654 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 13:38:45] 2025-11-26 18:38:00,654 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 13:38:45] 2025-11-26 18:38:00,654 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 13:38:45] 2025-11-26 18:38:00,654 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 13:38:45] 2025-11-26 18:38:00,654 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 13:38:45] 2025-11-26 18:38:00,654 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 13:38:45] 2025-11-26 18:38:00,655 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 13:38:45] 2025-11-26 18:38:00,655 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 13:38:45] 2025-11-26 18:38:00,655 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 13:38:45] 2025-11-26 18:38:00,655 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 13:38:45] 2025-11-26 18:38:00,655 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 13:38:45] 2025-11-26 18:38:00,656 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 13:38:45] 2025-11-26 18:38:00,656 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 13:38:45] 2025-11-26 18:38:00,656 | INFO     | job 6896989992 has completed (purged errors)
[2025-11-26 13:38:45] 2025-11-26 18:38:00,656 | INFO     | overall cleanup function is called
[2025-11-26 13:38:45] 2025-11-26 18:38:01,671 | INFO     | --- collectZombieJob: --- 10, [11274]
[2025-11-26 13:38:45] 2025-11-26 18:38:01,671 | INFO     | zombie collector waiting for pid 11274
[2025-11-26 13:38:45] 2025-11-26 18:38:01,672 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 13:38:45] 2025-11-26 18:38:01,672 | INFO     | collected zombie processes
[2025-11-26 13:38:45] 2025-11-26 18:38:01,672 | INFO     | will attempt to kill all subprocesses of pid=11274
[2025-11-26 13:38:45] 2025-11-26 18:38:01,762 | INFO     | process IDs to be killed: [11274] (in reverse order)
[2025-11-26 13:38:45] 2025-11-26 18:38:01,812 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 13:38:45] 2025-11-26 18:38:01,812 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 13:38:45] 2025-11-26 18:38:01,816 | INFO     | did not find any defunct processes belonging to 11274
[2025-11-26 13:38:45] 2025-11-26 18:38:01,819 | INFO     | did not find any defunct processes belonging to 11274
[2025-11-26 13:38:45] 2025-11-26 18:38:01,821 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 13:38:45] 2025-11-26 18:38:01,821 | INFO     | ready for new job
[2025-11-26 13:38:45] 2025-11-26 18:38:01,821 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 13:38:45] 2025-11-26 18:38:01,824 | INFO     | ***************************************
[2025-11-26 13:38:45] 2025-11-26 18:38:01,824 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 13:38:45] 2025-11-26 18:38:01,824 | INFO     | ***************************************
[2025-11-26 13:38:45] 2025-11-26 18:38:01,824 | INFO     | 
[2025-11-26 13:38:45] 2025-11-26 18:38:01,825 | INFO     | architecture information:
[2025-11-26 13:38:45] 2025-11-26 18:38:01,825 | INFO     | executing command: cat /etc/os-release
[2025-11-26 13:38:45] 2025-11-26 18:38:01,840 | INFO     | cat /etc/os-release:
[2025-11-26 13:38:45] NAME="CentOS Linux"
[2025-11-26 13:38:45] VERSION="7 (Core)"
[2025-11-26 13:38:45] ID="centos"
[2025-11-26 13:38:45] ID_LIKE="rhel fedora"
[2025-11-26 13:38:45] VERSION_ID="7"
[2025-11-26 13:38:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 13:38:45] ANSI_COLOR="0;31"
[2025-11-26 13:38:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 13:38:45] HOME_URL="https://www.centos.org/"
[2025-11-26 13:38:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 13:38:45] 
[2025-11-26 13:38:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 13:38:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 13:38:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 13:38:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 13:38:45] 
[2025-11-26 13:38:45] 2025-11-26 18:38:01,841 | INFO     | ***************************************
[2025-11-26 13:38:45] 2025-11-26 18:38:02,344 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 13:38:45] 2025-11-26 18:38:02,360 | INFO     | sufficient remaining disk space (28251783168 B)
[2025-11-26 13:38:45] 2025-11-26 18:38:02,360 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 13:38:45] 2025-11-26 18:38:02,361 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 13:38:45] 2025-11-26 18:38:02,361 | INFO     | update_server=False
[2025-11-26 13:38:45] 2025-11-26 18:38:02,361 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 13:38:45] 2025-11-26 18:38:02,361 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:38:45] 2025-11-26 18:38:02,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:38:45] 2025-11-26 18:38:02,362 | INFO     | aborting loop
[2025-11-26 13:38:45] 2025-11-26 18:38:02,858 | INFO     | all data control threads have been joined
[2025-11-26 13:38:45] 2025-11-26 18:38:02,966 | INFO     | all payload control threads have been joined
[2025-11-26 13:38:45] 2025-11-26 18:38:03,162 | INFO     | all job control threads have been joined
[2025-11-26 13:38:45] 2025-11-26 18:38:03,254 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 13:38:45] 2025-11-26 18:38:03,367 | INFO     | [job] retrieve thread has finished
[2025-11-26 13:38:45] 2025-11-26 18:38:03,367 | INFO     | [job] queue monitor thread has finished
[2025-11-26 13:38:45] 2025-11-26 18:38:03,368 | INFO     | [job] job monitor thread has finished
[2025-11-26 13:38:45] 2025-11-26 18:38:03,394 | INFO     | [payload] failed_post thread has finished
[2025-11-26 13:38:45] 2025-11-26 18:38:03,503 | INFO     | [payload] validate_post thread has finished
[2025-11-26 13:38:45] 2025-11-26 18:38:03,690 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 13:38:45] 2025-11-26 18:38:03,757 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 13:38:45] 2025-11-26 18:38:03,863 | INFO     | [data] control thread has finished
[2025-11-26 13:38:45] 2025-11-26 18:38:03,941 | INFO     | [data] copytool_in thread has finished
[2025-11-26 13:38:45] 2025-11-26 18:38:03,967 | INFO     | [payload] control thread has finished
[2025-11-26 13:38:45] 2025-11-26 18:38:04,167 | INFO     | [job] control thread has finished
[2025-11-26 13:38:45] 2025-11-26 18:38:04,645 | INFO     | [job] validate thread has finished
[2025-11-26 13:38:45] 2025-11-26 18:38:04,845 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 13:38:45] 2025-11-26 18:38:04,849 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 13:38:45] 2025-11-26 18:38:05,257 | INFO     | [data] copytool_out thread has finished
[2025-11-26 13:38:45] 2025-11-26 18:38:05,834 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 13:38:45] 2025-11-26 18:38:09,840 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 13:38:45] 2025-11-26 18:38:33,301 | INFO     | PID=4864 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-26 13:38:45] 2025-11-26 18:38:33,302 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 13:38:45] 2025-11-26 18:38:33,302 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 13:38:45] 2025-11-26 18:38:33,302 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 13:38:45] 2025-11-26 18:38:38,273 | INFO     | [monitor] cgroup control has ended
[2025-11-26 13:38:45] 2025-11-26 18:38:39,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140488860923712)>', '<ExcThread(monitor, started 140487818200832)>']
[2025-11-26 13:38:45] 2025-11-26 18:38:40,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 13:38:45] 2025-11-26 18:38:40,338 | INFO     | [monitor] control thread has ended
[2025-11-26 13:38:45] 2025-11-26 18:38:44,994 | INFO     | all workflow threads have been joined
[2025-11-26 13:38:45] 2025-11-26 18:38:44,994 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 13:38:45] 2025-11-26 18:38:44,994 | INFO     | traces error code: 0
[2025-11-26 13:38:45] 2025-11-26 18:38:44,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 13:38:45] 2025-11-26 18:38:45,090 [wrapper] ==== pilot stdout END ====
[2025-11-26 13:38:45] 2025-11-26 18:38:45,094 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 13:38:45] 2025-11-26 18:38:45,097 [wrapper] pilotpid: 4864
[2025-11-26 13:38:45] 2025-11-26 18:38:45,101 [wrapper] Pilot exit status: 0
[2025-11-26 13:38:45] 2025-11-26 18:38:45,116 [wrapper] pandaids: 6896989992
[2025-11-26 13:38:45] 2025-11-26 18:38:45,162 [wrapper] cleanup supervisor_pilot 15177 4867
[2025-11-26 13:38:45] 2025-11-26 18:38:45,166 [wrapper] Test setup, not cleaning
[2025-11-26 13:38:45] 2025-11-26 18:38:45,171 [wrapper] apfmon messages muted
[2025-11-26 13:38:45] 2025-11-26 18:38:45,175 [wrapper] ==== wrapper stdout END ====
[2025-11-26 13:38:45] 2025-11-26 18:38:45,178 [wrapper] ==== wrapper stderr END ====
[2025-11-26 13:38:45]  *** Error codes and diagnostics ***
[2025-11-26 13:38:45]     "exeErrorCode": 0,
[2025-11-26 13:38:45]     "exeErrorDiag": "",
[2025-11-26 13:38:45]     "pilotErrorCode": 0,
[2025-11-26 13:38:45]     "pilotErrorDiag": "",
[2025-11-26 13:38:45]  *** Listing of results directory ***
[2025-11-26 13:38:45] total 1308800
[2025-11-26 13:38:45] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 06:49 pilot3.tar.gz
[2025-11-26 13:38:45] -rwx------ 1 boincer umatlas     36292 Nov 25 07:32 runpilot2-wrapper.sh
[2025-11-26 13:38:45] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 07:32 queuedata.json
[2025-11-26 13:38:45] -rw-r--r-- 1 boincer umatlas       100 Nov 26 06:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 13:38:45] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 06:30 run_atlas
[2025-11-26 13:38:45] -rw-r--r-- 1 boincer umatlas       105 Nov 26 06:30 job.xml
[2025-11-26 13:38:45] -rw-r--r-- 2 boincer umatlas 409256738 Nov 26 06:30 EVNT.47483658._002164.pool.root.1
[2025-11-26 13:38:45] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 06:30 start_atlas.sh
[2025-11-26 13:38:45] drwxrwx--x 2 boincer umatlas      4096 Nov 26 06:30 shared
[2025-11-26 13:38:45] -rw-r--r-- 2 boincer umatlas    590100 Nov 26 06:30 input.tar.gz
[2025-11-26 13:38:45] -rw-r--r-- 1 boincer umatlas         0 Nov 26 06:30 boinc_lockfile
[2025-11-26 13:38:45] -rw-r--r-- 1 boincer umatlas      2784 Nov 26 06:30 pandaJob.out
[2025-11-26 13:38:45] -rw------- 1 boincer umatlas        57 Nov 26 06:30 setup.sh.local
[2025-11-26 13:38:45] -rw------- 1 boincer umatlas    991830 Nov 26 06:30 agis_schedconf.cvmfs.json
[2025-11-26 13:38:45] drwx------ 5 boincer umatlas      4096 Nov 26 06:30 pilot3
[2025-11-26 13:38:45] -rw-r--r-- 1 boincer umatlas       533 Nov 26 13:28 boinc_task_state.xml
[2025-11-26 13:38:45] -rw-r--r-- 1 boincer umatlas      5956 Nov 26 13:37 init_data.xml
[2025-11-26 13:38:45] -rw------- 1 boincer umatlas 915494460 Nov 26 13:37 HITS.47556161._001480.pool.root.1
[2025-11-26 13:38:45] -rw------- 1 boincer umatlas      1061 Nov 26 13:37 memory_monitor_summary.json
[2025-11-26 13:38:45] -rw------- 1 boincer umatlas   1516240 Nov 26 13:37 agis_ddmendpoints.agis.ALL.json
[2025-11-26 13:38:45] -rw------- 1 boincer umatlas   2179493 Nov 26 13:37 log.47556161._001480.job.log.tgz.1
[2025-11-26 13:38:45] -rw------- 1 boincer umatlas      8678 Nov 26 13:38 heartbeat.json
[2025-11-26 13:38:45] -rw------- 1 boincer umatlas        95 Nov 26 13:38 pilot_heartbeat.json
[2025-11-26 13:38:45] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 13:38 boinc_mmap_file
[2025-11-26 13:38:45] -rw-r--r-- 1 boincer umatlas        29 Nov 26 13:38 wrapper_checkpoint.txt
[2025-11-26 13:38:45] -rw------- 1 boincer umatlas      4745 Nov 26 13:38 pilotlog.txt
[2025-11-26 13:38:45] -rw------- 1 boincer umatlas   3584852 Nov 26 13:38 log.47556161._001480.job.log.1
[2025-11-26 13:38:45] -rw------- 1 boincer umatlas       353 Nov 26 13:38 output.list
[2025-11-26 13:38:45] -rw-r--r-- 1 boincer umatlas       620 Nov 26 13:38 runtime_log
[2025-11-26 13:38:45] -rw------- 1 boincer umatlas   5785600 Nov 26 13:38 result.tar.gz
[2025-11-26 13:38:45] -rw-r--r-- 1 boincer umatlas      9345 Nov 26 13:38 runtime_log.err
[2025-11-26 13:38:45] -rw------- 1 boincer umatlas       670 Nov 26 13:38 dVuNDmSO7h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOTJKDmOSuGsm.diag
[2025-11-26 13:38:45] -rw-r--r-- 1 boincer umatlas     21304 Nov 26 13:38 stderr.txt
[2025-11-26 13:38:45] HITS file was successfully produced:
[2025-11-26 13:38:45] -rw------- 1 boincer umatlas 915494460 Nov 26 13:37 shared/HITS.pool.root.1
[2025-11-26 13:38:45]  *** Contents of shared directory: ***
[2025-11-26 13:38:45] total 1299964
[2025-11-26 13:38:45] -rw-r--r-- 2 boincer umatlas 409256738 Nov 26 06:30 ATLAS.root_0
[2025-11-26 13:38:45] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 06:30 start_atlas.sh
[2025-11-26 13:38:45] -rw-r--r-- 2 boincer umatlas    590100 Nov 26 06:30 input.tar.gz
[2025-11-26 13:38:45] -rw------- 1 boincer umatlas 915494460 Nov 26 13:37 HITS.pool.root.1
[2025-11-26 13:38:45] -rw------- 1 boincer umatlas   5785600 Nov 26 13:38 result.tar.gz
13:38:46 (1023): run_atlas exited; CPU time 286529.920156
13:38:46 (1023): called boinc_finish(0)

</stderr_txt>
]]>

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