Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:23:37 (7595): wrapper (7.7.26015): starting
06:23:37 (7595): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 06:23:37] Arguments: --nthreads 12
[2025-11-26 06:23:37] Threads: 12
[2025-11-26 06:23:37] Checking for CVMFS
[2025-11-26 06:23:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 06:23:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 06:23:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 06:23:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 06:23:37] 2.11.2.0 2924 287571 99128 153320 3 80 17829572 20275201 1 130560 4 131229845 99.966 17358592 14078 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 06:23:37] CVMFS is ok
[2025-11-26 06:23:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 06:23:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 06:23:37] Further information can be found at the LHC@home message board.
[2025-11-26 06:23:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 06:23:37] Checking for apptainer binary...
[2025-11-26 06:23:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 06:23:37] Running /usr/bin/apptainer --version
[2025-11-26 06:23:37] apptainer version 1.3.2-1.el7
[2025-11-26 06:23:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 06:23:38] c-205-28.aglt2.org
[2025-11-26 06:23:38] apptainer works
[2025-11-26 06:23:38] Set ATHENA_PROC_NUMBER=12
[2025-11-26 06:23:38] Set ATHENA_CORE_NUMBER=12
[2025-11-26 06:23:38] Starting ATLAS job with PandaID=6896989984
[2025-11-26 06:23:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 13:31:41]  *** The last 200 lines of the pilot log: ***
[2025-11-26 13:31:41] 2025-11-26 18:30:41,625 | INFO     | time since job start (25608s) is within the limit (172800.0s)
[2025-11-26 13:31:41] 2025-11-26 18:30:42,516 | INFO     | monitor loop #1921: job 0:6896989984 is in state 'finished'
[2025-11-26 13:31:41] 2025-11-26 18:30:42,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 13:31:41] 2025-11-26 18:30:43,631 | INFO     | time since job start (25610s) is within the limit (172800.0s)
[2025-11-26 13:31:41] 2025-11-26 18:30:44,252 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 13:31:41] 2025-11-26 18:30:44,256 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1673.5833333333333
[2025-11-26 13:31:41] 2025-11-26 18:30:44,258 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896989984/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 13:31:41] 2025-11-26 18:30:44,259 | INFO     | extracted standard info from prmon json
[2025-11-26 13:31:41] 2025-11-26 18:30:44,260 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 13:31:41] 2025-11-26 18:30:44,260 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 13:31:41] 2025-11-26 18:30:44,268 | INFO     | fitting pss+swap vs Time
[2025-11-26 13:31:41] 2025-11-26 18:30:44,268 | INFO     | sum of square deviations: 22973381975.740417
[2025-11-26 13:31:41] 2025-11-26 18:30:44,272 | INFO     | sum of deviations: 321442896724.0645
[2025-11-26 13:31:41] 2025-11-26 18:30:44,272 | INFO     | mean x: 1764169042.745238
[2025-11-26 13:31:41] 2025-11-26 18:30:44,273 | INFO     | mean y: 3419055.907142857
[2025-11-26 13:31:41] 2025-11-26 18:30:44,273 | INFO     | intersect: -24680783209.557198
[2025-11-26 13:31:41] 2025-11-26 18:30:44,273 | INFO     | chi2: 6.401556499017013
[2025-11-26 13:31:41] 2025-11-26 18:30:44,274 | INFO     | sum of square deviations: 22162663305.43613
[2025-11-26 13:31:41] 2025-11-26 18:30:44,277 | INFO     | sum of deviations: 483442188382.0409
[2025-11-26 13:31:41] 2025-11-26 18:30:44,277 | INFO     | mean x: 1764168890.2481928
[2025-11-26 13:31:41] 2025-11-26 18:30:44,278 | INFO     | mean y: 3449492.387951807
[2025-11-26 13:31:41] 2025-11-26 18:30:44,278 | INFO     | intersect: -38479004408.71459
[2025-11-26 13:31:41] 2025-11-26 18:30:44,278 | INFO     | chi2: 3.3234388055868167
[2025-11-26 13:31:41] 2025-11-26 18:30:44,278 | INFO     | current chi2=3.3234388055868167 (change=48.08389481375123 %)
[2025-11-26 13:31:41] 2025-11-26 18:30:44,279 | INFO     | sum of square deviations: 21371247322.624413
[2025-11-26 13:31:41] 2025-11-26 18:30:44,282 | INFO     | sum of deviations: 551513963862.7946
[2025-11-26 13:31:41] 2025-11-26 18:30:44,282 | INFO     | mean x: 1764168737.7512195
[2025-11-26 13:31:41] 2025-11-26 18:30:44,283 | INFO     | mean y: 3462578.9097560975
[2025-11-26 13:31:41] 2025-11-26 18:30:44,283 | INFO     | intersect: -45523299560.51772
[2025-11-26 13:31:41] 2025-11-26 18:30:44,283 | INFO     | chi2: 2.613721462255906
[2025-11-26 13:31:41] 2025-11-26 18:30:44,283 | INFO     | current chi2=2.613721462255906 (change=21.35490932277288 %)
[2025-11-26 13:31:41] 2025-11-26 18:30:44,283 | INFO     | right removable region: 409
[2025-11-26 13:31:41] 2025-11-26 18:30:44,284 | INFO     | sum of square deviations: 22162600475.436142
[2025-11-26 13:31:41] 2025-11-26 18:30:44,287 | INFO     | sum of deviations: 177660066405.53522
[2025-11-26 13:31:41] 2025-11-26 18:30:44,288 | INFO     | mean x: 1764169195.2481928
[2025-11-26 13:31:41] 2025-11-26 18:30:44,288 | INFO     | mean y: 3446024.713253012
[2025-11-26 13:31:41] 2025-11-26 18:30:44,288 | INFO     | intersect: -14138505265.063162
[2025-11-26 13:31:41] 2025-11-26 18:30:44,288 | INFO     | chi2: 3.947484478609709
[2025-11-26 13:31:41] 2025-11-26 18:30:44,288 | INFO     | current chi2=3.947484478609709 (change=38.33555199870746 %)
[2025-11-26 13:31:41] 2025-11-26 18:30:44,289 | INFO     | sum of square deviations: 21371146855.124325
[2025-11-26 13:31:41] 2025-11-26 18:30:44,292 | INFO     | sum of deviations: 145564257881.2852
[2025-11-26 13:31:41] 2025-11-26 18:30:44,293 | INFO     | mean x: 1764169347.7487805
[2025-11-26 13:31:41] 2025-11-26 18:30:44,293 | INFO     | mean y: 3452201.0707317074
[2025-11-26 13:31:41] 2025-11-26 18:30:44,293 | INFO     | intersect: -12012749064.252905
[2025-11-26 13:31:41] 2025-11-26 18:30:44,293 | INFO     | chi2: 3.887170247731184
[2025-11-26 13:31:41] 2025-11-26 18:30:44,293 | INFO     | current chi2=3.887170247731184 (change=1.5279155929643489 %)
[2025-11-26 13:31:41] 2025-11-26 18:30:44,294 | INFO     | left removable region: 20
[2025-11-26 13:31:41] 2025-11-26 18:30:44,294 | INFO     | sum of square deviations: 18252683349.804596
[2025-11-26 13:31:41] 2025-11-26 18:30:44,297 | INFO     | sum of deviations: 335840162484.1544
[2025-11-26 13:31:41] 2025-11-26 18:30:44,298 | INFO     | mean x: 1764169317.2544987
[2025-11-26 13:31:41] 2025-11-26 18:30:44,298 | INFO     | mean y: 3505764.4832904884
[2025-11-26 13:31:41] 2025-11-26 18:30:44,298 | INFO     | intersect: -32456319391.178185
[2025-11-26 13:31:41] 2025-11-26 18:30:44,298 | INFO     | chi2: 0.037296933849609915
[2025-11-26 13:31:41] 2025-11-26 18:30:44,298 | INFO     | current memory leak: 18.40 B/s (using 389 data points, chi2=0.04)
[2025-11-26 13:31:41] 2025-11-26 18:30:44,299 | INFO     | could have reported an average CPU frequency of 2363 MHz (18 samples)
[2025-11-26 13:31:41] 2025-11-26 18:30:44,299 | INFO     | ..............................
[2025-11-26 13:31:41] 2025-11-26 18:30:44,299 | INFO     | . Timing measurements:
[2025-11-26 13:31:41] 2025-11-26 18:30:44,299 | INFO     | . get job = 0 s
[2025-11-26 13:31:41] 2025-11-26 18:30:44,299 | INFO     | . initial setup = 2 s
[2025-11-26 13:31:41] 2025-11-26 18:30:44,299 | INFO     | . payload setup = 7 s
[2025-11-26 13:31:41] 2025-11-26 18:30:44,299 | INFO     | . stage-in = 0 s
[2025-11-26 13:31:41] 2025-11-26 18:30:44,300 | INFO     | . payload execution = 25571 s
[2025-11-26 13:31:41] 2025-11-26 18:30:44,300 | INFO     | . stage-out = 3 s
[2025-11-26 13:31:41] 2025-11-26 18:30:44,300 | INFO     | . log creation = 0 s
[2025-11-26 13:31:41] 2025-11-26 18:30:44,300 | INFO     | ..............................
[2025-11-26 13:31:41] 2025-11-26 18:30:44,380 | INFO     | 
[2025-11-26 13:31:41] 2025-11-26 18:30:44,380 | INFO     | job summary report
[2025-11-26 13:31:41] 2025-11-26 18:30:44,380 | INFO     | --------------------------------------------------
[2025-11-26 13:31:41] 2025-11-26 18:30:44,380 | INFO     | PanDA job id: 6896989984
[2025-11-26 13:31:41] 2025-11-26 18:30:44,380 | INFO     | task id: 47556161
[2025-11-26 13:31:41] 2025-11-26 18:30:44,380 | INFO     | errors: (none)
[2025-11-26 13:31:41] 2025-11-26 18:30:44,381 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 13:31:41] 2025-11-26 18:30:44,381 | INFO     | pilot state: finished 
[2025-11-26 13:31:41] 2025-11-26 18:30:44,381 | INFO     | transexitcode: 0
[2025-11-26 13:31:41] 2025-11-26 18:30:44,381 | INFO     | exeerrorcode: 0
[2025-11-26 13:31:41] 2025-11-26 18:30:44,381 | INFO     | exeerrordiag: 
[2025-11-26 13:31:41] 2025-11-26 18:30:44,381 | INFO     | exitcode: 0
[2025-11-26 13:31:41] 2025-11-26 18:30:44,382 | INFO     | exitmsg: OK
[2025-11-26 13:31:41] 2025-11-26 18:30:44,382 | INFO     | cpuconsumptiontime: 292961 s
[2025-11-26 13:31:41] 2025-11-26 18:30:44,382 | INFO     | nevents: 1000
[2025-11-26 13:31:41] 2025-11-26 18:30:44,382 | INFO     | neventsw: 0
[2025-11-26 13:31:41] 2025-11-26 18:30:44,382 | INFO     | pid: 17715
[2025-11-26 13:31:41] 2025-11-26 18:30:44,382 | INFO     | pgrp: 17715
[2025-11-26 13:31:41] 2025-11-26 18:30:44,383 | INFO     | corecount: 12
[2025-11-26 13:31:41] 2025-11-26 18:30:44,383 | INFO     | event service: False
[2025-11-26 13:31:41] 2025-11-26 18:30:44,383 | INFO     | sizes: {0: 2284213, 5: 2284475, 11: 2284531, 25583: 2321712, 25587: 2330706, 25588: 2330762, 25594: 2331136}
[2025-11-26 13:31:41] 2025-11-26 18:30:44,383 | INFO     | --------------------------------------------------
[2025-11-26 13:31:41] 2025-11-26 18:30:44,383 | INFO     | 
[2025-11-26 13:31:41] 2025-11-26 18:30:44,383 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 13:31:41] 2025-11-26 18:30:44,406 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 13:31:41] 2025-11-26 18:30:44,406 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 13:31:41] 2025-11-26 18:30:44,407 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 13:31:41] 2025-11-26 18:30:44,407 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 13:31:41] 2025-11-26 18:30:44,407 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 13:31:41] 2025-11-26 18:30:44,407 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 13:31:41] 2025-11-26 18:30:44,407 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 13:31:41] 2025-11-26 18:30:44,407 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 13:31:41] 2025-11-26 18:30:44,408 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 13:31:41] 2025-11-26 18:30:44,408 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 13:31:41] 2025-11-26 18:30:44,408 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 13:31:41] 2025-11-26 18:30:44,408 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 13:31:41] 2025-11-26 18:30:44,408 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 13:31:41] 2025-11-26 18:30:44,409 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 13:31:41] 2025-11-26 18:30:44,409 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 13:31:41] 2025-11-26 18:30:44,409 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 13:31:41] 2025-11-26 18:30:44,409 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 13:31:41] 2025-11-26 18:30:44,409 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 13:31:41] 2025-11-26 18:30:44,409 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 13:31:41] 2025-11-26 18:30:44,410 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 13:31:41] 2025-11-26 18:30:44,410 | INFO     | job 6896989984 has completed (purged errors)
[2025-11-26 13:31:41] 2025-11-26 18:30:44,410 | INFO     | overall cleanup function is called
[2025-11-26 13:31:41] 2025-11-26 18:30:45,427 | INFO     | --- collectZombieJob: --- 10, [17715]
[2025-11-26 13:31:41] 2025-11-26 18:30:45,427 | INFO     | zombie collector waiting for pid 17715
[2025-11-26 13:31:41] 2025-11-26 18:30:45,427 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 13:31:41] 2025-11-26 18:30:45,428 | INFO     | collected zombie processes
[2025-11-26 13:31:41] 2025-11-26 18:30:45,428 | INFO     | will attempt to kill all subprocesses of pid=17715
[2025-11-26 13:31:41] 2025-11-26 18:30:45,516 | INFO     | process IDs to be killed: [17715] (in reverse order)
[2025-11-26 13:31:41] 2025-11-26 18:30:45,586 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 13:31:41] 2025-11-26 18:30:45,587 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 13:31:41] 2025-11-26 18:30:45,590 | INFO     | did not find any defunct processes belonging to 17715
[2025-11-26 13:31:41] 2025-11-26 18:30:45,594 | INFO     | did not find any defunct processes belonging to 17715
[2025-11-26 13:31:41] 2025-11-26 18:30:45,596 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 13:31:41] 2025-11-26 18:30:45,596 | INFO     | ready for new job
[2025-11-26 13:31:41] 2025-11-26 18:30:45,596 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 13:31:41] 2025-11-26 18:30:45,598 | INFO     | ***************************************
[2025-11-26 13:31:41] 2025-11-26 18:30:45,598 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 13:31:41] 2025-11-26 18:30:45,598 | INFO     | ***************************************
[2025-11-26 13:31:41] 2025-11-26 18:30:45,598 | INFO     | 
[2025-11-26 13:31:41] 2025-11-26 18:30:45,599 | INFO     | architecture information:
[2025-11-26 13:31:41] 2025-11-26 18:30:45,599 | INFO     | executing command: cat /etc/os-release
[2025-11-26 13:31:41] 2025-11-26 18:30:45,614 | INFO     | cat /etc/os-release:
[2025-11-26 13:31:41] NAME="CentOS Linux"
[2025-11-26 13:31:41] VERSION="7 (Core)"
[2025-11-26 13:31:41] ID="centos"
[2025-11-26 13:31:41] ID_LIKE="rhel fedora"
[2025-11-26 13:31:41] VERSION_ID="7"
[2025-11-26 13:31:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 13:31:41] ANSI_COLOR="0;31"
[2025-11-26 13:31:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 13:31:41] HOME_URL="https://www.centos.org/"
[2025-11-26 13:31:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 13:31:41] 
[2025-11-26 13:31:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 13:31:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 13:31:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 13:31:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 13:31:41] 
[2025-11-26 13:31:41] 2025-11-26 18:30:45,615 | INFO     | ***************************************
[2025-11-26 13:31:41] 2025-11-26 18:30:46,118 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 13:31:41] 2025-11-26 18:30:46,136 | INFO     | sufficient remaining disk space (28247588864 B)
[2025-11-26 13:31:41] 2025-11-26 18:30:46,137 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 13:31:41] 2025-11-26 18:30:46,137 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 13:31:41] 2025-11-26 18:30:46,137 | INFO     | update_server=False
[2025-11-26 13:31:41] 2025-11-26 18:30:46,137 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 13:31:41] 2025-11-26 18:30:46,137 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:31:41] 2025-11-26 18:30:46,138 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:31:41] 2025-11-26 18:30:46,138 | INFO     | aborting loop
[2025-11-26 13:31:41] 2025-11-26 18:30:46,519 | INFO     | all payload control threads have been joined
[2025-11-26 13:31:41] 2025-11-26 18:30:46,830 | INFO     | all job control threads have been joined
[2025-11-26 13:31:41] 2025-11-26 18:30:46,990 | INFO     | all data control threads have been joined
[2025-11-26 13:31:41] 2025-11-26 18:30:47,078 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 13:31:41] 2025-11-26 18:30:47,141 | INFO     | [job] retrieve thread has finished
[2025-11-26 13:31:41] 2025-11-26 18:30:47,143 | INFO     | [job] job monitor thread has finished
[2025-11-26 13:31:41] 2025-11-26 18:30:47,143 | INFO     | [job] queue monitor thread has finished
[2025-11-26 13:31:41] 2025-11-26 18:30:47,150 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 13:31:41] 2025-11-26 18:30:47,295 | INFO     | [job] validate thread has finished
[2025-11-26 13:31:41] 2025-11-26 18:30:47,317 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 13:31:41] 2025-11-26 18:30:47,521 | INFO     | [payload] control thread has finished
[2025-11-26 13:31:41] 2025-11-26 18:30:47,674 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 13:31:41] 2025-11-26 18:30:47,802 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 13:31:41] 2025-11-26 18:30:47,835 | INFO     | [job] control thread has finished
[2025-11-26 13:31:41] 2025-11-26 18:30:47,995 | INFO     | [data] control thread has finished
[2025-11-26 13:31:41] 2025-11-26 18:30:48,033 | INFO     | [payload] failed_post thread has finished
[2025-11-26 13:31:41] 2025-11-26 18:30:48,136 | INFO     | [payload] validate_post thread has finished
[2025-11-26 13:31:41] 2025-11-26 18:30:48,355 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 13:31:41] 2025-11-26 18:30:48,376 | INFO     | [data] copytool_in thread has finished
[2025-11-26 13:31:41] 2025-11-26 18:30:49,083 | INFO     | [data] copytool_out thread has finished
[2025-11-26 13:31:41] 2025-11-26 18:30:52,361 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 13:31:41] 2025-11-26 18:31:16,833 | INFO     | PID=11280 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 13:31:41] 2025-11-26 18:31:16,834 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 13:31:41] 2025-11-26 18:31:16,834 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 13:31:41] 2025-11-26 18:31:16,834 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 13:31:41] 2025-11-26 18:31:35,202 | INFO     | [monitor] cgroup control has ended
[2025-11-26 13:31:41] 2025-11-26 18:31:36,479 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139636256409408)>', '<ExcThread(monitor, started 139635661453056)>']
[2025-11-26 13:31:41] 2025-11-26 18:31:36,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 13:31:41] 2025-11-26 18:31:36,932 | INFO     | [monitor] control thread has ended
[2025-11-26 13:31:41] 2025-11-26 18:31:41,486 | INFO     | all workflow threads have been joined
[2025-11-26 13:31:41] 2025-11-26 18:31:41,486 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 13:31:41] 2025-11-26 18:31:41,486 | INFO     | traces error code: 0
[2025-11-26 13:31:41] 2025-11-26 18:31:41,487 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 13:31:41] 2025-11-26 18:31:41,570 [wrapper] ==== pilot stdout END ====
[2025-11-26 13:31:41] 2025-11-26 18:31:41,574 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 13:31:41] 2025-11-26 18:31:41,578 [wrapper] pilotpid: 11280
[2025-11-26 13:31:41] 2025-11-26 18:31:41,581 [wrapper] Pilot exit status: 0
[2025-11-26 13:31:41] 2025-11-26 18:31:41,595 [wrapper] pandaids: 6896989984
[2025-11-26 13:31:41] 2025-11-26 18:31:41,641 [wrapper] cleanup supervisor_pilot 19132 11281
[2025-11-26 13:31:41] 2025-11-26 18:31:41,645 [wrapper] Test setup, not cleaning
[2025-11-26 13:31:41] 2025-11-26 18:31:41,650 [wrapper] apfmon messages muted
[2025-11-26 13:31:41] 2025-11-26 18:31:41,654 [wrapper] ==== wrapper stdout END ====
[2025-11-26 13:31:41] 2025-11-26 18:31:41,657 [wrapper] ==== wrapper stderr END ====
[2025-11-26 13:31:41]  *** Error codes and diagnostics ***
[2025-11-26 13:31:41]     "exeErrorCode": 0,
[2025-11-26 13:31:41]     "exeErrorDiag": "",
[2025-11-26 13:31:41]     "pilotErrorCode": 0,
[2025-11-26 13:31:41]     "pilotErrorDiag": "",
[2025-11-26 13:31:41]  *** Listing of results directory ***
[2025-11-26 13:31:41] total 1312720
[2025-11-26 13:31:41] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 06:49 pilot3.tar.gz
[2025-11-26 13:31:41] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 07:31 queuedata.json
[2025-11-26 13:31:41] -rwx------ 1 boincer umatlas     36292 Nov 25 07:31 runpilot2-wrapper.sh
[2025-11-26 13:31:41] -rw-r--r-- 1 boincer umatlas       100 Nov 26 06:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 13:31:41] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 06:23 run_atlas
[2025-11-26 13:31:41] -rw-r--r-- 1 boincer umatlas       105 Nov 26 06:23 job.xml
[2025-11-26 13:31:41] -rw-r--r-- 2 boincer umatlas 409256738 Nov 26 06:23 EVNT.47483658._002164.pool.root.1
[2025-11-26 13:31:41] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 06:23 start_atlas.sh
[2025-11-26 13:31:41] drwxrwx--x 2 boincer umatlas      4096 Nov 26 06:23 shared
[2025-11-26 13:31:41] -rw-r--r-- 2 boincer umatlas    590105 Nov 26 06:23 input.tar.gz
[2025-11-26 13:31:41] -rw-r--r-- 1 boincer umatlas         0 Nov 26 06:23 boinc_lockfile
[2025-11-26 13:31:41] -rw-r--r-- 1 boincer umatlas      2784 Nov 26 06:23 pandaJob.out
[2025-11-26 13:31:41] -rw------- 1 boincer umatlas        57 Nov 26 06:23 setup.sh.local
[2025-11-26 13:31:41] -rw------- 1 boincer umatlas    991830 Nov 26 06:23 agis_schedconf.cvmfs.json
[2025-11-26 13:31:41] drwx------ 5 boincer umatlas      4096 Nov 26 06:23 pilot3
[2025-11-26 13:31:41] -rw-r--r-- 1 boincer umatlas       533 Nov 26 13:19 boinc_task_state.xml
[2025-11-26 13:31:41] -rw-r--r-- 1 boincer umatlas      5955 Nov 26 13:29 init_data.xml
[2025-11-26 13:31:41] -rw------- 1 boincer umatlas 919514687 Nov 26 13:30 HITS.47556161._001472.pool.root.1
[2025-11-26 13:31:41] -rw------- 1 boincer umatlas      1061 Nov 26 13:30 memory_monitor_summary.json
[2025-11-26 13:31:41] -rw------- 1 boincer umatlas   1516240 Nov 26 13:30 agis_ddmendpoints.agis.ALL.json
[2025-11-26 13:31:41] -rw------- 1 boincer umatlas   2179753 Nov 26 13:30 log.47556161._001472.job.log.tgz.1
[2025-11-26 13:31:41] -rw------- 1 boincer umatlas      8667 Nov 26 13:30 heartbeat.json
[2025-11-26 13:31:41] -rw------- 1 boincer umatlas        95 Nov 26 13:31 pilot_heartbeat.json
[2025-11-26 13:31:41] -rw-r--r-- 1 boincer umatlas        29 Nov 26 13:31 wrapper_checkpoint.txt
[2025-11-26 13:31:41] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 13:31 boinc_mmap_file
[2025-11-26 13:31:41] -rw------- 1 boincer umatlas      4746 Nov 26 13:31 pilotlog.txt
[2025-11-26 13:31:41] -rw------- 1 boincer umatlas   3585607 Nov 26 13:31 log.47556161._001472.job.log.1
[2025-11-26 13:31:41] -rw------- 1 boincer umatlas       353 Nov 26 13:31 output.list
[2025-11-26 13:31:41] -rw-r--r-- 1 boincer umatlas       620 Nov 26 13:31 runtime_log
[2025-11-26 13:31:41] -rw------- 1 boincer umatlas   5785600 Nov 26 13:31 result.tar.gz
[2025-11-26 13:31:41] -rw------- 1 boincer umatlas       670 Nov 26 13:31 yxJMDmgN7h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHTJKDmfDbGJo.diag
[2025-11-26 13:31:41] -rw-r--r-- 1 boincer umatlas      9345 Nov 26 13:31 runtime_log.err
[2025-11-26 13:31:41] -rw-r--r-- 1 boincer umatlas     21323 Nov 26 13:31 stderr.txt
[2025-11-26 13:31:41] HITS file was successfully produced:
[2025-11-26 13:31:41] -rw------- 1 boincer umatlas 919514687 Nov 26 13:30 shared/HITS.pool.root.1
[2025-11-26 13:31:41]  *** Contents of shared directory: ***
[2025-11-26 13:31:41] total 1303884
[2025-11-26 13:31:41] -rw-r--r-- 2 boincer umatlas 409256738 Nov 26 06:23 ATLAS.root_0
[2025-11-26 13:31:41] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 06:23 start_atlas.sh
[2025-11-26 13:31:41] -rw-r--r-- 2 boincer umatlas    590105 Nov 26 06:23 input.tar.gz
[2025-11-26 13:31:41] -rw------- 1 boincer umatlas 919514687 Nov 26 13:30 HITS.pool.root.1
[2025-11-26 13:31:41] -rw------- 1 boincer umatlas   5785600 Nov 26 13:31 result.tar.gz
13:31:43 (7595): run_atlas exited; CPU time 286346.287727
13:31:43 (7595): called boinc_finish(0)

</stderr_txt>
]]>

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