Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:11:39 (9159): wrapper (7.7.26015): starting
05:11:39 (9159): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 05:11:39] Arguments: --nthreads 12
[2025-11-26 05:11:39] Threads: 12
[2025-11-26 05:11:39] Checking for CVMFS
[2025-11-26 05:11:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 05:11:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 05:11:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 05:11:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 05:11:40] 2.11.2.0 3035 287499 97508 153316 3 82 18420983 20275200 1 130560 3 129038193 99.968 17102819 14281 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 05:11:40] CVMFS is ok
[2025-11-26 05:11:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 05:11:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 05:11:40] Further information can be found at the LHC@home message board.
[2025-11-26 05:11:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 05:11:40] Checking for apptainer binary...
[2025-11-26 05:11:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 05:11:40] Running /usr/bin/apptainer --version
[2025-11-26 05:11:40] apptainer version 1.3.2-1.el7
[2025-11-26 05:11:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 05:11:41] c-205-31.aglt2.org
[2025-11-26 05:11:41] apptainer works
[2025-11-26 05:11:41] Set ATHENA_PROC_NUMBER=12
[2025-11-26 05:11:41] Set ATHENA_CORE_NUMBER=12
[2025-11-26 05:11:41] Starting ATLAS job with PandaID=6896989442
[2025-11-26 05:11:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 12:24:57]  *** The last 200 lines of the pilot log: ***
[2025-11-26 12:24:57] 2025-11-26 17:24:22,737 | INFO     | monitor loop #1945: job 0:6896989442 is in state 'finished'
[2025-11-26 12:24:57] 2025-11-26 17:24:22,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:24:57] 2025-11-26 17:24:24,302 | INFO     | time since job start (25948s) is within the limit (172800.0s)
[2025-11-26 12:24:57] 2025-11-26 17:24:24,639 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 12:24:57] 2025-11-26 17:24:24,643 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-26 12:24:57] 2025-11-26 17:24:24,646 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896989442/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 12:24:57] 2025-11-26 17:24:24,646 | INFO     | extracted standard info from prmon json
[2025-11-26 12:24:57] 2025-11-26 17:24:24,646 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 12:24:57] 2025-11-26 17:24:24,646 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 12:24:57] 2025-11-26 17:24:24,653 | INFO     | fitting pss+swap vs Time
[2025-11-26 12:24:57] 2025-11-26 17:24:24,653 | INFO     | sum of square deviations: 23803611374.037773
[2025-11-26 12:24:57] 2025-11-26 17:24:24,657 | INFO     | sum of deviations: 387069974209.0847
[2025-11-26 12:24:57] 2025-11-26 17:24:24,657 | INFO     | mean x: 1764164878.242353
[2025-11-26 12:24:57] 2025-11-26 17:24:24,658 | INFO     | mean y: 3410810.7952941176
[2025-11-26 12:24:57] 2025-11-26 17:24:24,658 | INFO     | intersect: -28683633486.467102
[2025-11-26 12:24:57] 2025-11-26 17:24:24,658 | INFO     | chi2: 6.605444750487816
[2025-11-26 12:24:57] 2025-11-26 17:24:24,659 | INFO     | sum of square deviations: 22973357453.740433
[2025-11-26 12:24:57] 2025-11-26 17:24:24,662 | INFO     | sum of deviations: 552299310301.4502
[2025-11-26 12:24:57] 2025-11-26 17:24:24,663 | INFO     | mean x: 1764164725.745238
[2025-11-26 12:24:57] 2025-11-26 17:24:24,663 | INFO     | mean y: 3441145.35
[2025-11-26 12:24:57] 2025-11-26 17:24:24,663 | INFO     | intersect: -42408599116.906166
[2025-11-26 12:24:57] 2025-11-26 17:24:24,663 | INFO     | chi2: 3.4385767024568845
[2025-11-26 12:24:57] 2025-11-26 17:24:24,663 | INFO     | current chi2=3.4385767024568845 (change=47.94329780439169 %)
[2025-11-26 12:24:57] 2025-11-26 17:24:24,664 | INFO     | sum of square deviations: 22162638783.43613
[2025-11-26 12:24:57] 2025-11-26 17:24:24,668 | INFO     | sum of deviations: 618502487502.812
[2025-11-26 12:24:57] 2025-11-26 17:24:24,668 | INFO     | mean x: 1764164573.2481928
[2025-11-26 12:24:57] 2025-11-26 17:24:24,668 | INFO     | mean y: 3453570.7493975903
[2025-11-26 12:24:57] 2025-11-26 17:24:24,668 | INFO     | intersect: -49229861450.106255
[2025-11-26 12:24:57] 2025-11-26 17:24:24,668 | INFO     | chi2: 2.7531699451752565
[2025-11-26 12:24:57] 2025-11-26 17:24:24,669 | INFO     | current chi2=2.7531699451752565 (change=19.932862244774142 %)
[2025-11-26 12:24:57] 2025-11-26 17:24:24,669 | INFO     | right removable region: 414
[2025-11-26 12:24:57] 2025-11-26 17:24:24,669 | INFO     | sum of square deviations: 22973294623.740425
[2025-11-26 12:24:57] 2025-11-26 17:24:24,673 | INFO     | sum of deviations: 238422168389.57138
[2025-11-26 12:24:57] 2025-11-26 17:24:24,673 | INFO     | mean x: 1764165030.745238
[2025-11-26 12:24:57] 2025-11-26 17:24:24,673 | INFO     | mean y: 3438043.285714286
[2025-11-26 12:24:57] 2025-11-26 17:24:24,673 | INFO     | intersect: -18305474932.24689
[2025-11-26 12:24:57] 2025-11-26 17:24:24,674 | INFO     | chi2: 4.101397548054989
[2025-11-26 12:24:57] 2025-11-26 17:24:24,674 | INFO     | current chi2=4.101397548054989 (change=37.90883577139755 %)
[2025-11-26 12:24:57] 2025-11-26 17:24:24,674 | INFO     | sum of square deviations: 22162538620.930122
[2025-11-26 12:24:57] 2025-11-26 17:24:24,678 | INFO     | sum of deviations: 198003102882.49832
[2025-11-26 12:24:57] 2025-11-26 17:24:24,678 | INFO     | mean x: 1764165183.245783
[2025-11-26 12:24:57] 2025-11-26 17:24:24,678 | INFO     | mean y: 3445640.1421686746
[2025-11-26 12:24:57] 2025-11-26 17:24:24,678 | INFO     | intersect: -15757843544.935688
[2025-11-26 12:24:57] 2025-11-26 17:24:24,679 | INFO     | chi2: 4.005699200144255
[2025-11-26 12:24:57] 2025-11-26 17:24:24,679 | INFO     | current chi2=4.005699200144255 (change=2.3333107017659787 %)
[2025-11-26 12:24:57] 2025-11-26 17:24:24,679 | INFO     | left removable region: 20
[2025-11-26 12:24:57] 2025-11-26 17:24:24,680 | INFO     | sum of square deviations: 18965545179.62434
[2025-11-26 12:24:57] 2025-11-26 17:24:24,683 | INFO     | sum of deviations: 370976021524.0508
[2025-11-26 12:24:57] 2025-11-26 17:24:24,683 | INFO     | mean x: 1764165152.751269
[2025-11-26 12:24:57] 2025-11-26 17:24:24,683 | INFO     | mean y: 3502113.3984771576
[2025-11-26 12:24:57] 2025-11-26 17:24:24,683 | INFO     | intersect: -34504494544.78134
[2025-11-26 12:24:57] 2025-11-26 17:24:24,684 | INFO     | chi2: 0.05860742702576501
[2025-11-26 12:24:57] 2025-11-26 17:24:24,684 | INFO     | current memory leak: 19.56 B/s (using 394 data points, chi2=0.06)
[2025-11-26 12:24:57] 2025-11-26 17:24:24,685 | INFO     | could have reported an average CPU frequency of 2365 MHz (18 samples)
[2025-11-26 12:24:57] 2025-11-26 17:24:24,685 | INFO     | ..............................
[2025-11-26 12:24:57] 2025-11-26 17:24:24,685 | INFO     | . Timing measurements:
[2025-11-26 12:24:57] 2025-11-26 17:24:24,685 | INFO     | . get job = 0 s
[2025-11-26 12:24:57] 2025-11-26 17:24:24,685 | INFO     | . initial setup = 2 s
[2025-11-26 12:24:57] 2025-11-26 17:24:24,685 | INFO     | . payload setup = 7 s
[2025-11-26 12:24:57] 2025-11-26 17:24:24,685 | INFO     | . stage-in = 0 s
[2025-11-26 12:24:57] 2025-11-26 17:24:24,685 | INFO     | . payload execution = 25909 s
[2025-11-26 12:24:57] 2025-11-26 17:24:24,686 | INFO     | . stage-out = 3 s
[2025-11-26 12:24:57] 2025-11-26 17:24:24,686 | INFO     | . log creation = 0 s
[2025-11-26 12:24:57] 2025-11-26 17:24:24,686 | INFO     | ..............................
[2025-11-26 12:24:57] 2025-11-26 17:24:24,960 | INFO     | 
[2025-11-26 12:24:57] 2025-11-26 17:24:24,960 | INFO     | job summary report
[2025-11-26 12:24:57] 2025-11-26 17:24:24,960 | INFO     | --------------------------------------------------
[2025-11-26 12:24:57] 2025-11-26 17:24:24,960 | INFO     | PanDA job id: 6896989442
[2025-11-26 12:24:57] 2025-11-26 17:24:24,961 | INFO     | task id: 47556173
[2025-11-26 12:24:57] 2025-11-26 17:24:24,961 | INFO     | errors: (none)
[2025-11-26 12:24:57] 2025-11-26 17:24:24,961 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 12:24:57] 2025-11-26 17:24:24,961 | INFO     | pilot state: finished 
[2025-11-26 12:24:57] 2025-11-26 17:24:24,961 | INFO     | transexitcode: 0
[2025-11-26 12:24:57] 2025-11-26 17:24:24,962 | INFO     | exeerrorcode: 0
[2025-11-26 12:24:57] 2025-11-26 17:24:24,962 | INFO     | exeerrordiag: 
[2025-11-26 12:24:57] 2025-11-26 17:24:24,962 | INFO     | exitcode: 0
[2025-11-26 12:24:57] 2025-11-26 17:24:24,962 | INFO     | exitmsg: OK
[2025-11-26 12:24:57] 2025-11-26 17:24:24,962 | INFO     | cpuconsumptiontime: 296322 s
[2025-11-26 12:24:57] 2025-11-26 17:24:24,962 | INFO     | nevents: 1000
[2025-11-26 12:24:57] 2025-11-26 17:24:24,962 | INFO     | neventsw: 0
[2025-11-26 12:24:57] 2025-11-26 17:24:24,963 | INFO     | pid: 19599
[2025-11-26 12:24:57] 2025-11-26 17:24:24,963 | INFO     | pgrp: 19599
[2025-11-26 12:24:57] 2025-11-26 17:24:24,963 | INFO     | corecount: 12
[2025-11-26 12:24:57] 2025-11-26 17:24:24,963 | INFO     | event service: False
[2025-11-26 12:24:57] 2025-11-26 17:24:24,963 | INFO     | sizes: {0: 2284261, 1: 2284289, 5: 2284551, 11: 2284607, 25920: 2321900, 25921: 2321899, 25925: 2331133, 25932: 2331323}
[2025-11-26 12:24:57] 2025-11-26 17:24:24,963 | INFO     | --------------------------------------------------
[2025-11-26 12:24:57] 2025-11-26 17:24:24,964 | INFO     | 
[2025-11-26 12:24:57] 2025-11-26 17:24:24,964 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 12:24:57] 2025-11-26 17:24:24,989 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 12:24:57] 2025-11-26 17:24:24,989 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 12:24:57] 2025-11-26 17:24:24,989 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 12:24:57] 2025-11-26 17:24:24,990 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 12:24:57] 2025-11-26 17:24:24,990 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 12:24:57] 2025-11-26 17:24:24,990 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 12:24:57] 2025-11-26 17:24:24,990 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 12:24:57] 2025-11-26 17:24:24,990 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 12:24:57] 2025-11-26 17:24:24,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 12:24:57] 2025-11-26 17:24:24,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 12:24:57] 2025-11-26 17:24:24,991 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 12:24:57] 2025-11-26 17:24:24,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 12:24:57] 2025-11-26 17:24:24,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 12:24:57] 2025-11-26 17:24:24,991 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 12:24:57] 2025-11-26 17:24:24,992 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 12:24:57] 2025-11-26 17:24:24,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 12:24:57] 2025-11-26 17:24:24,992 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 12:24:57] 2025-11-26 17:24:24,992 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 12:24:57] 2025-11-26 17:24:24,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 12:24:57] 2025-11-26 17:24:24,992 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 12:24:57] 2025-11-26 17:24:24,993 | INFO     | job 6896989442 has completed (purged errors)
[2025-11-26 12:24:57] 2025-11-26 17:24:24,993 | INFO     | overall cleanup function is called
[2025-11-26 12:24:57] 2025-11-26 17:24:26,005 | INFO     | --- collectZombieJob: --- 10, [19599]
[2025-11-26 12:24:57] 2025-11-26 17:24:26,005 | INFO     | zombie collector waiting for pid 19599
[2025-11-26 12:24:57] 2025-11-26 17:24:26,005 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 12:24:57] 2025-11-26 17:24:26,005 | INFO     | collected zombie processes
[2025-11-26 12:24:57] 2025-11-26 17:24:26,005 | INFO     | will attempt to kill all subprocesses of pid=19599
[2025-11-26 12:24:57] 2025-11-26 17:24:26,097 | INFO     | process IDs to be killed: [19599] (in reverse order)
[2025-11-26 12:24:57] 2025-11-26 17:24:26,149 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 12:24:57] 2025-11-26 17:24:26,149 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 12:24:57] 2025-11-26 17:24:26,153 | INFO     | did not find any defunct processes belonging to 19599
[2025-11-26 12:24:57] 2025-11-26 17:24:26,156 | INFO     | did not find any defunct processes belonging to 19599
[2025-11-26 12:24:57] 2025-11-26 17:24:26,158 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 12:24:57] 2025-11-26 17:24:26,158 | INFO     | ready for new job
[2025-11-26 12:24:57] 2025-11-26 17:24:26,158 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 12:24:57] 2025-11-26 17:24:26,160 | INFO     | ***************************************
[2025-11-26 12:24:57] 2025-11-26 17:24:26,161 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 12:24:57] 2025-11-26 17:24:26,161 | INFO     | ***************************************
[2025-11-26 12:24:57] 2025-11-26 17:24:26,161 | INFO     | 
[2025-11-26 12:24:57] 2025-11-26 17:24:26,161 | INFO     | architecture information:
[2025-11-26 12:24:57] 2025-11-26 17:24:26,162 | INFO     | executing command: cat /etc/os-release
[2025-11-26 12:24:57] 2025-11-26 17:24:26,177 | INFO     | cat /etc/os-release:
[2025-11-26 12:24:57] NAME="CentOS Linux"
[2025-11-26 12:24:57] VERSION="7 (Core)"
[2025-11-26 12:24:57] ID="centos"
[2025-11-26 12:24:57] ID_LIKE="rhel fedora"
[2025-11-26 12:24:57] VERSION_ID="7"
[2025-11-26 12:24:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 12:24:57] ANSI_COLOR="0;31"
[2025-11-26 12:24:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 12:24:57] HOME_URL="https://www.centos.org/"
[2025-11-26 12:24:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 12:24:57] 
[2025-11-26 12:24:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 12:24:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 12:24:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 12:24:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 12:24:57] 
[2025-11-26 12:24:57] 2025-11-26 17:24:26,178 | INFO     | ***************************************
[2025-11-26 12:24:57] 2025-11-26 17:24:26,681 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 12:24:57] 2025-11-26 17:24:26,698 | INFO     | sufficient remaining disk space (28251783168 B)
[2025-11-26 12:24:57] 2025-11-26 17:24:26,698 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 12:24:57] 2025-11-26 17:24:26,699 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 12:24:57] 2025-11-26 17:24:26,699 | INFO     | update_server=False
[2025-11-26 12:24:57] 2025-11-26 17:24:26,699 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 12:24:57] 2025-11-26 17:24:26,699 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:24:57] 2025-11-26 17:24:26,700 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 12:24:57] 2025-11-26 17:24:26,700 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:24:57] 2025-11-26 17:24:26,701 | INFO     | aborting loop
[2025-11-26 12:24:57] 2025-11-26 17:24:27,071 | INFO     | all data control threads have been joined
[2025-11-26 12:24:57] 2025-11-26 17:24:27,705 | INFO     | [job] retrieve thread has finished
[2025-11-26 12:24:57] 2025-11-26 17:24:27,706 | INFO     | [job] queue monitor thread has finished
[2025-11-26 12:24:57] 2025-11-26 17:24:27,706 | INFO     | [job] job monitor thread has finished
[2025-11-26 12:24:57] 2025-11-26 17:24:27,842 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 12:24:57] 2025-11-26 17:24:28,076 | INFO     | [data] control thread has finished
[2025-11-26 12:24:57] 2025-11-26 17:24:28,099 | INFO     | all job control threads have been joined
[2025-11-26 12:24:57] 2025-11-26 17:24:28,173 | INFO     | all payload control threads have been joined
[2025-11-26 12:24:57] 2025-11-26 17:24:28,252 | INFO     | [job] validate thread has finished
[2025-11-26 12:24:57] 2025-11-26 17:24:28,393 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 12:24:57] 2025-11-26 17:24:28,633 | INFO     | [payload] failed_post thread has finished
[2025-11-26 12:24:57] 2025-11-26 17:24:28,706 | INFO     | [data] copytool_out thread has finished
[2025-11-26 12:24:57] 2025-11-26 17:24:28,852 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 12:24:57] 2025-11-26 17:24:28,963 | INFO     | [data] copytool_in thread has finished
[2025-11-26 12:24:57] 2025-11-26 17:24:29,103 | INFO     | [job] control thread has finished
[2025-11-26 12:24:57] 2025-11-26 17:24:29,164 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 12:24:57] 2025-11-26 17:24:29,179 | INFO     | [payload] control thread has finished
[2025-11-26 12:24:57] 2025-11-26 17:24:29,216 | INFO     | [payload] validate_post thread has finished
[2025-11-26 12:24:57] 2025-11-26 17:24:32,858 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 12:24:57] 2025-11-26 17:24:36,855 | INFO     | job.realtimelogging is not enabled
[2025-11-26 12:24:57] 2025-11-26 17:24:37,861 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 12:24:57] 2025-11-26 17:24:38,821 | INFO     | [monitor] cgroup control has ended
[2025-11-26 12:24:57] 2025-11-26 17:24:39,469 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139883470317376)>', '<ExcThread(monitor, started 139882873722624)>']
[2025-11-26 12:24:57] 2025-11-26 17:24:44,478 | INFO     | all workflow threads have been joined
[2025-11-26 12:24:57] 2025-11-26 17:24:44,478 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 12:24:57] 2025-11-26 17:24:44,478 | INFO     | traces error code: 0
[2025-11-26 12:24:57] 2025-11-26 17:24:44,479 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 12:24:57] 2025-11-26 17:24:57,509 | INFO     | PID=13171 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 12:24:57] 2025-11-26 17:24:57,510 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 12:24:57] 2025-11-26 17:24:57,510 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 12:24:57] 2025-11-26 17:24:57,510 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 12:24:57] 2025-11-26 17:24:57,510 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 12:24:57] 2025-11-26 17:24:57,510 | INFO     | [monitor] control thread has ended
[2025-11-26 12:24:57] 2025-11-26 17:24:57,611 [wrapper] ==== pilot stdout END ====
[2025-11-26 12:24:57] 2025-11-26 17:24:57,615 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 12:24:57] 2025-11-26 17:24:57,619 [wrapper] pilotpid: 13171
[2025-11-26 12:24:57] 2025-11-26 17:24:57,623 [wrapper] Pilot exit status: 0
[2025-11-26 12:24:57] 2025-11-26 17:24:57,637 [wrapper] pandaids: 6896989442
[2025-11-26 12:24:57] 2025-11-26 17:24:57,671 [wrapper] cleanup supervisor_pilot 21139 13172
[2025-11-26 12:24:57] 2025-11-26 17:24:57,675 [wrapper] Test setup, not cleaning
[2025-11-26 12:24:57] 2025-11-26 17:24:57,679 [wrapper] apfmon messages muted
[2025-11-26 12:24:57] 2025-11-26 17:24:57,683 [wrapper] ==== wrapper stdout END ====
[2025-11-26 12:24:57] 2025-11-26 17:24:57,687 [wrapper] ==== wrapper stderr END ====
[2025-11-26 12:24:57]  *** Error codes and diagnostics ***
[2025-11-26 12:24:57]     "exeErrorCode": 0,
[2025-11-26 12:24:57]     "exeErrorDiag": "",
[2025-11-26 12:24:57]     "pilotErrorCode": 0,
[2025-11-26 12:24:57]     "pilotErrorDiag": "",
[2025-11-26 12:24:57]  *** Listing of results directory ***
[2025-11-26 12:24:57] total 1309600
[2025-11-26 12:24:57] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 06:49 pilot3.tar.gz
[2025-11-26 12:24:57] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 07:05 queuedata.json
[2025-11-26 12:24:57] -rwx------ 1 boincer umatlas     36292 Nov 25 07:05 runpilot2-wrapper.sh
[2025-11-26 12:24:57] -rw-r--r-- 1 boincer umatlas       100 Nov 26 05:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 12:24:57] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 05:11 run_atlas
[2025-11-26 12:24:57] -rw-r--r-- 1 boincer umatlas       105 Nov 26 05:11 job.xml
[2025-11-26 12:24:57] -rw-r--r-- 2 boincer umatlas 409129904 Nov 26 05:11 EVNT.47483658._003081.pool.root.1
[2025-11-26 12:24:57] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 05:11 start_atlas.sh
[2025-11-26 12:24:57] drwxrwx--x 2 boincer umatlas      4096 Nov 26 05:11 shared
[2025-11-26 12:24:57] -rw-r--r-- 2 boincer umatlas    590106 Nov 26 05:11 input.tar.gz
[2025-11-26 12:24:57] -rw-r--r-- 1 boincer umatlas         0 Nov 26 05:11 boinc_lockfile
[2025-11-26 12:24:57] -rw-r--r-- 1 boincer umatlas      2783 Nov 26 05:11 pandaJob.out
[2025-11-26 12:24:57] -rw------- 1 boincer umatlas        57 Nov 26 05:11 setup.sh.local
[2025-11-26 12:24:57] -rw------- 1 boincer umatlas    991827 Nov 26 05:11 agis_schedconf.cvmfs.json
[2025-11-26 12:24:57] drwx------ 5 boincer umatlas      4096 Nov 26 05:11 pilot3
[2025-11-26 12:24:57] -rw-r--r-- 1 boincer umatlas       532 Nov 26 12:12 boinc_task_state.xml
[2025-11-26 12:24:57] -rw-r--r-- 1 boincer umatlas      5956 Nov 26 12:21 init_data.xml
[2025-11-26 12:24:57] -rw------- 1 boincer umatlas 916327625 Nov 26 12:23 HITS.47556173._000632.pool.root.1
[2025-11-26 12:24:57] -rw------- 1 boincer umatlas        95 Nov 26 12:24 pilot_heartbeat.json
[2025-11-26 12:24:57] -rw------- 1 boincer umatlas      1061 Nov 26 12:24 memory_monitor_summary.json
[2025-11-26 12:24:57] -rw------- 1 boincer umatlas   1516240 Nov 26 12:24 agis_ddmendpoints.agis.ALL.json
[2025-11-26 12:24:57] -rw------- 1 boincer umatlas   2185825 Nov 26 12:24 log.47556173._000632.job.log.tgz.1
[2025-11-26 12:24:57] -rw------- 1 boincer umatlas      8678 Nov 26 12:24 heartbeat.json
[2025-11-26 12:24:57] -rw-r--r-- 1 boincer umatlas        29 Nov 26 12:24 wrapper_checkpoint.txt
[2025-11-26 12:24:57] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 12:24 boinc_mmap_file
[2025-11-26 12:24:57] -rw------- 1 boincer umatlas       745 Nov 26 12:24 pilotlog.txt
[2025-11-26 12:24:57] -rw------- 1 boincer umatlas   3644576 Nov 26 12:24 log.47556173._000632.job.log.1
[2025-11-26 12:24:57] -rw------- 1 boincer umatlas       353 Nov 26 12:24 output.list
[2025-11-26 12:24:57] -rw-r--r-- 1 boincer umatlas       620 Nov 26 12:24 runtime_log
[2025-11-26 12:24:57] -rw------- 1 boincer umatlas   5847040 Nov 26 12:24 result.tar.gz
[2025-11-26 12:24:57] -rw------- 1 boincer umatlas       670 Nov 26 12:24 SLvNDmxy6h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmoSJKDmEcc6Um.diag
[2025-11-26 12:24:57] -rw-r--r-- 1 boincer umatlas      9345 Nov 26 12:24 runtime_log.err
[2025-11-26 12:24:57] -rw-r--r-- 1 boincer umatlas     21288 Nov 26 12:24 stderr.txt
[2025-11-26 12:24:57] HITS file was successfully produced:
[2025-11-26 12:24:57] -rw------- 1 boincer umatlas 916327625 Nov 26 12:23 shared/HITS.pool.root.1
[2025-11-26 12:24:57]  *** Contents of shared directory: ***
[2025-11-26 12:24:57] total 1300708
[2025-11-26 12:24:57] -rw-r--r-- 2 boincer umatlas 409129904 Nov 26 05:11 ATLAS.root_0
[2025-11-26 12:24:57] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 05:11 start_atlas.sh
[2025-11-26 12:24:57] -rw-r--r-- 2 boincer umatlas    590106 Nov 26 05:11 input.tar.gz
[2025-11-26 12:24:57] -rw------- 1 boincer umatlas 916327625 Nov 26 12:23 HITS.pool.root.1
[2025-11-26 12:24:57] -rw------- 1 boincer umatlas   5847040 Nov 26 12:24 result.tar.gz
12:24:59 (9159): run_atlas exited; CPU time 289590.122019
12:24:59 (9159): called boinc_finish(0)

</stderr_txt>
]]>

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