Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:08:52 (4003193): wrapper (7.7.26015): starting
05:08:52 (4003193): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 05:08:52] Arguments: --nthreads 8
[2025-11-26 05:08:52] Threads: 8
[2025-11-26 05:08:52] Checking for CVMFS
[2025-11-26 05:08:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 05:08:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 05:08:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 05:08:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 05:08:52] 2.10.1.0 4440 251731 171440 153316 2 81 10035847 18432000 3769 130560 2 279791697 99.988 10183599 6499 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-26 05:08:52] CVMFS is ok
[2025-11-26 05:08:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 05:08:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 05:08:52] Further information can be found at the LHC@home message board.
[2025-11-26 05:08:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 05:08:52] Checking for apptainer binary...
[2025-11-26 05:08:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 05:08:52] Running /usr/bin/apptainer --version
[2025-11-26 05:08:52] apptainer version 1.1.9-1.el8
[2025-11-26 05:08:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 05:08:53] c-16-31.aglt2.org
[2025-11-26 05:08:53] apptainer works
[2025-11-26 05:08:53] Set ATHENA_PROC_NUMBER=8
[2025-11-26 05:08:53] Set ATHENA_CORE_NUMBER=8
[2025-11-26 05:08:53] Starting ATLAS job with PandaID=6896766902
[2025-11-26 05:08:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:01:17]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:01:17] 2025-11-27 04:00:37,937 | INFO     | preparing for final server update for job 6896766902 in state='finished'
[2025-11-26 23:01:17] 2025-11-27 04:00:37,938 | INFO     | this job has now completed (state=finished)
[2025-11-26 23:01:17] 2025-11-27 04:00:37,938 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-26 23:01:17] 2025-11-27 04:00:37,938 | INFO     | log transfer has been attempted: DONE
[2025-11-26 23:01:17] 2025-11-27 04:00:37,938 | INFO     | job 6896766902 has finished - writing final server update
[2025-11-26 23:01:17] 2025-11-27 04:00:37,939 | INFO     | total number of processed events: 1000 (read)
[2025-11-26 23:01:17] 2025-11-27 04:00:37,939 | INFO     | monitor loop #4592: job 0:6896766902 is in state 'finished'
[2025-11-26 23:01:17] 2025-11-27 04:00:37,940 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:01:17] 2025-11-27 04:00:37,940 | INFO     | executing command: lscpu
[2025-11-26 23:01:17] 2025-11-27 04:00:38,004 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-26 23:01:17] 2025-11-27 04:00:38,784 | INFO     | time since job start (64293s) is within the limit (172800.0s)
[2025-11-26 23:01:17] 2025-11-27 04:00:40,442 | INFO     | monitor loop #4593: job 0:6896766902 is in state 'finished'
[2025-11-26 23:01:17] 2025-11-27 04:00:40,442 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:01:17] 2025-11-27 04:00:40,791 | INFO     | time since job start (64295s) is within the limit (172800.0s)
[2025-11-26 23:01:17] 2025-11-27 04:00:42,796 | INFO     | time since job start (64297s) is within the limit (172800.0s)
[2025-11-26 23:01:17] 2025-11-27 04:00:42,945 | INFO     | monitor loop #4594: job 0:6896766902 is in state 'finished'
[2025-11-26 23:01:17] 2025-11-27 04:00:42,945 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:01:17] 2025-11-27 04:00:43,668 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 23:01:17] 2025-11-27 04:00:43,677 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2949.857075
[2025-11-26 23:01:17] 2025-11-27 04:00:43,686 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6896766902/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 23:01:17] 2025-11-27 04:00:43,687 | INFO     | extracted standard info from prmon json
[2025-11-26 23:01:17] 2025-11-27 04:00:43,687 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 23:01:17] 2025-11-27 04:00:43,687 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 23:01:17] 2025-11-27 04:00:43,717 | INFO     | fitting pss+swap vs Time
[2025-11-26 23:01:17] 2025-11-27 04:00:43,718 | INFO     | sum of square deviations: 363079231210.0844
[2025-11-26 23:01:17] 2025-11-27 04:00:43,753 | INFO     | sum of deviations: 25981071033563.15
[2025-11-26 23:01:17] 2025-11-27 04:00:43,753 | INFO     | mean x: 1764183889.556926
[2025-11-26 23:01:17] 2025-11-27 04:00:43,753 | INFO     | mean y: 3934641.4392789374
[2025-11-26 23:01:17] 2025-11-27 04:00:43,753 | INFO     | intersect: -126236794683.9046
[2025-11-26 23:01:17] 2025-11-27 04:00:43,755 | INFO     | chi2: 55.520605548277416
[2025-11-26 23:01:17] 2025-11-27 04:00:43,756 | INFO     | sum of square deviations: 357936576342.56805
[2025-11-26 23:01:17] 2025-11-27 04:00:43,792 | INFO     | sum of deviations: 26525444343140.844
[2025-11-26 23:01:17] 2025-11-27 04:00:43,792 | INFO     | mean x: 1764183737.0571973
[2025-11-26 23:01:17] 2025-11-27 04:00:43,792 | INFO     | mean y: 3950784.551954242
[2025-11-26 23:01:17] 2025-11-27 04:00:43,793 | INFO     | intersect: -130733617324.71663
[2025-11-26 23:01:17] 2025-11-27 04:00:43,794 | INFO     | chi2: 54.97358858007188
[2025-11-26 23:01:17] 2025-11-27 04:00:43,794 | INFO     | current chi2=54.97358858007188 (change=0.9852503639029645 %)
[2025-11-26 23:01:17] 2025-11-27 04:00:43,794 | INFO     | right removable region: 1048
[2025-11-26 23:01:17] 2025-11-27 04:00:43,796 | INFO     | sum of square deviations: 357936539742.5683
[2025-11-26 23:01:17] 2025-11-27 04:00:43,831 | INFO     | sum of deviations: 25529989875508.684
[2025-11-26 23:01:17] 2025-11-27 04:00:43,831 | INFO     | mean x: 1764184042.0571973
[2025-11-26 23:01:17] 2025-11-27 04:00:43,831 | INFO     | mean y: 3948006.905624404
[2025-11-26 23:01:17] 2025-11-27 04:00:43,832 | INFO     | intersect: -125827297846.47157
[2025-11-26 23:01:17] 2025-11-27 04:00:43,833 | INFO     | chi2: 52.996456140154585
[2025-11-26 23:01:17] 2025-11-27 04:00:43,833 | INFO     | current chi2=52.996456140154585 (change=4.546329030809977 %)
[2025-11-26 23:01:17] 2025-11-27 04:00:43,833 | INFO     | left removable region: 10
[2025-11-26 23:01:17] 2025-11-27 04:00:43,835 | INFO     | sum of square deviations: 346794081462.03156
[2025-11-26 23:01:17] 2025-11-27 04:00:43,870 | INFO     | sum of deviations: 25874611117072.14
[2025-11-26 23:01:17] 2025-11-27 04:00:43,870 | INFO     | mean x: 1764184011.5578034
[2025-11-26 23:01:17] 2025-11-27 04:00:43,870 | INFO     | mean y: 3973513.322736031
[2025-11-26 23:01:17] 2025-11-27 04:00:43,870 | INFO     | intersect: -131623345631.14238
[2025-11-26 23:01:17] 2025-11-27 04:00:43,872 | INFO     | chi2: 52.56494272822101
[2025-11-26 23:01:17] 2025-11-27 04:00:43,872 | INFO     | current memory leak: 74.61 B/s (using 1038 data points, chi2=52.56)
[2025-11-26 23:01:17] 2025-11-27 04:00:43,873 | INFO     | could have reported an average CPU frequency of 2910 MHz (39 samples)
[2025-11-26 23:01:17] 2025-11-27 04:00:43,873 | INFO     | ..............................
[2025-11-26 23:01:17] 2025-11-27 04:00:43,874 | INFO     | . Timing measurements:
[2025-11-26 23:01:17] 2025-11-27 04:00:43,874 | INFO     | . get job = 0 s
[2025-11-26 23:01:17] 2025-11-27 04:00:43,874 | INFO     | . initial setup = 2 s
[2025-11-26 23:01:17] 2025-11-27 04:00:43,874 | INFO     | . payload setup = 6 s
[2025-11-26 23:01:17] 2025-11-27 04:00:43,874 | INFO     | . stage-in = 0 s
[2025-11-26 23:01:17] 2025-11-27 04:00:43,874 | INFO     | . payload execution = 64257 s
[2025-11-26 23:01:17] 2025-11-27 04:00:43,875 | INFO     | . stage-out = 3 s
[2025-11-26 23:01:17] 2025-11-27 04:00:43,875 | INFO     | . log creation = 0 s
[2025-11-26 23:01:17] 2025-11-27 04:00:43,875 | INFO     | ..............................
[2025-11-26 23:01:17] 2025-11-27 04:00:44,086 | INFO     | 
[2025-11-26 23:01:17] 2025-11-27 04:00:44,088 | INFO     | job summary report
[2025-11-26 23:01:17] 2025-11-27 04:00:44,088 | INFO     | --------------------------------------------------
[2025-11-26 23:01:17] 2025-11-27 04:00:44,088 | INFO     | PanDA job id: 6896766902
[2025-11-26 23:01:17] 2025-11-27 04:00:44,088 | INFO     | task id: 47556185
[2025-11-26 23:01:17] 2025-11-27 04:00:44,088 | INFO     | errors: (none)
[2025-11-26 23:01:17] 2025-11-27 04:00:44,089 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 23:01:17] 2025-11-27 04:00:44,089 | INFO     | pilot state: finished 
[2025-11-26 23:01:17] 2025-11-27 04:00:44,089 | INFO     | transexitcode: 0
[2025-11-26 23:01:17] 2025-11-27 04:00:44,089 | INFO     | exeerrorcode: 0
[2025-11-26 23:01:17] 2025-11-27 04:00:44,089 | INFO     | exeerrordiag: 
[2025-11-26 23:01:17] 2025-11-27 04:00:44,089 | INFO     | exitcode: 0
[2025-11-26 23:01:17] 2025-11-27 04:00:44,090 | INFO     | exitmsg: OK
[2025-11-26 23:01:17] 2025-11-27 04:00:44,090 | INFO     | cpuconsumptiontime: 475370 s
[2025-11-26 23:01:17] 2025-11-27 04:00:44,090 | INFO     | nevents: 1000
[2025-11-26 23:01:17] 2025-11-27 04:00:44,090 | INFO     | neventsw: 0
[2025-11-26 23:01:17] 2025-11-27 04:00:44,090 | INFO     | pid: 4025509
[2025-11-26 23:01:17] 2025-11-27 04:00:44,090 | INFO     | pgrp: 4025509
[2025-11-26 23:01:17] 2025-11-27 04:00:44,091 | INFO     | corecount: 8
[2025-11-26 23:01:17] 2025-11-27 04:00:44,091 | INFO     | event service: False
[2025-11-26 23:01:17] 2025-11-27 04:00:44,091 | INFO     | sizes: {0: 2284312, 1: 2284312, 5: 2284602, 12: 2284658, 64267: 2339143, 64272: 2348137, 64273: 2348321, 64282: 2348567}
[2025-11-26 23:01:17] 2025-11-27 04:00:44,091 | INFO     | --------------------------------------------------
[2025-11-26 23:01:17] 2025-11-27 04:00:44,091 | INFO     | 
[2025-11-26 23:01:17] 2025-11-27 04:00:44,092 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 23:01:17] 2025-11-27 04:00:44,113 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 23:01:17] 2025-11-27 04:00:44,113 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 23:01:17] 2025-11-27 04:00:44,113 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 23:01:17] 2025-11-27 04:00:44,113 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 23:01:17] 2025-11-27 04:00:44,114 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 23:01:17] 2025-11-27 04:00:44,114 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 23:01:17] 2025-11-27 04:00:44,114 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 23:01:17] 2025-11-27 04:00:44,114 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 23:01:17] 2025-11-27 04:00:44,114 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 23:01:17] 2025-11-27 04:00:44,115 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 23:01:17] 2025-11-27 04:00:44,115 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 23:01:17] 2025-11-27 04:00:44,115 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 23:01:17] 2025-11-27 04:00:44,115 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 23:01:17] 2025-11-27 04:00:44,115 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 23:01:17] 2025-11-27 04:00:44,116 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 23:01:17] 2025-11-27 04:00:44,116 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 23:01:17] 2025-11-27 04:00:44,116 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 23:01:17] 2025-11-27 04:00:44,116 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 23:01:17] 2025-11-27 04:00:44,116 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 23:01:17] 2025-11-27 04:00:44,116 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 23:01:17] 2025-11-27 04:00:44,117 | INFO     | job 6896766902 has completed (purged errors)
[2025-11-26 23:01:17] 2025-11-27 04:00:44,117 | INFO     | overall cleanup function is called
[2025-11-26 23:01:17] 2025-11-27 04:00:45,136 | INFO     | --- collectZombieJob: --- 10, [4025509]
[2025-11-26 23:01:17] 2025-11-27 04:00:45,136 | INFO     | zombie collector waiting for pid 4025509
[2025-11-26 23:01:17] 2025-11-27 04:00:45,136 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 23:01:17] 2025-11-27 04:00:45,137 | INFO     | collected zombie processes
[2025-11-26 23:01:17] 2025-11-27 04:00:45,137 | INFO     | will attempt to kill all subprocesses of pid=4025509
[2025-11-26 23:01:17] 2025-11-27 04:00:45,467 | INFO     | process IDs to be killed: [4025509] (in reverse order)
[2025-11-26 23:01:17] 2025-11-27 04:00:45,565 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 23:01:17] 2025-11-27 04:00:45,565 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 23:01:17] 2025-11-27 04:00:45,583 | INFO     | did not find any defunct processes belonging to 4025509
[2025-11-26 23:01:17] 2025-11-27 04:00:45,597 | INFO     | did not find any defunct processes belonging to 4025509
[2025-11-26 23:01:17] 2025-11-27 04:00:45,599 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 23:01:17] 2025-11-27 04:00:45,599 | INFO     | ready for new job
[2025-11-26 23:01:17] 2025-11-27 04:00:45,600 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 23:01:17] 2025-11-27 04:00:45,606 | INFO     | ***************************************
[2025-11-26 23:01:17] 2025-11-27 04:00:45,606 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 23:01:17] 2025-11-27 04:00:45,606 | INFO     | ***************************************
[2025-11-26 23:01:17] 2025-11-27 04:00:45,606 | INFO     | 
[2025-11-26 23:01:17] 2025-11-27 04:00:45,620 | INFO     | architecture information:
[2025-11-26 23:01:17] 2025-11-27 04:00:45,621 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:01:17] 2025-11-27 04:00:45,633 | INFO     | cat /etc/os-release:
[2025-11-26 23:01:17] NAME="CentOS Linux"
[2025-11-26 23:01:17] VERSION="7 (Core)"
[2025-11-26 23:01:17] ID="centos"
[2025-11-26 23:01:17] ID_LIKE="rhel fedora"
[2025-11-26 23:01:17] VERSION_ID="7"
[2025-11-26 23:01:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:01:17] ANSI_COLOR="0;31"
[2025-11-26 23:01:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:01:17] HOME_URL="https://www.centos.org/"
[2025-11-26 23:01:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:01:17] 
[2025-11-26 23:01:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:01:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:01:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:01:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:01:17] 
[2025-11-26 23:01:17] 2025-11-27 04:00:45,634 | INFO     | ***************************************
[2025-11-26 23:01:17] 2025-11-27 04:00:46,136 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 23:01:17] 2025-11-27 04:00:46,153 | INFO     | sufficient remaining disk space (99180609536 B)
[2025-11-26 23:01:17] 2025-11-27 04:00:46,153 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:01:17] 2025-11-27 04:00:46,154 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:01:17] 2025-11-27 04:00:46,154 | INFO     | update_server=False
[2025-11-26 23:01:17] 2025-11-27 04:00:46,154 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:01:17] 2025-11-27 04:00:46,154 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:01:17] 2025-11-27 04:00:46,185 | INFO     | all job control threads have been joined
[2025-11-26 23:01:17] 2025-11-27 04:00:46,390 | INFO     | all payload control threads have been joined
[2025-11-26 23:01:17] 2025-11-27 04:00:46,458 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:01:17] 2025-11-27 04:00:46,458 | INFO     | aborting loop
[2025-11-26 23:01:17] 2025-11-27 04:00:46,648 | INFO     | all data control threads have been joined
[2025-11-26 23:01:17] 2025-11-27 04:00:47,159 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:01:17] 2025-11-27 04:00:47,190 | INFO     | [job] control thread has finished
[2025-11-26 23:01:17] 2025-11-27 04:00:47,375 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:01:17] 2025-11-27 04:00:47,395 | INFO     | [payload] control thread has finished
[2025-11-26 23:01:17] 2025-11-27 04:00:47,439 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:01:17] 2025-11-27 04:00:47,463 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:01:17] 2025-11-27 04:00:47,653 | INFO     | [data] control thread has finished
[2025-11-26 23:01:17] 2025-11-27 04:00:47,930 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:01:17] 2025-11-27 04:00:47,946 | INFO     | [job] validate thread has finished
[2025-11-26 23:01:17] 2025-11-27 04:00:47,973 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:01:17] 2025-11-27 04:00:48,112 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:01:17] 2025-11-27 04:00:48,317 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:01:17] 2025-11-27 04:00:48,328 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:01:17] 2025-11-27 04:00:48,551 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:01:17] 2025-11-27 04:00:49,063 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:01:17] 2025-11-27 04:00:49,380 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:01:17] 2025-11-27 04:00:50,068 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:01:17] 2025-11-27 04:00:50,160 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:01:17] 2025-11-27 04:00:54,217 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:01:17] 2025-11-27 04:00:55,726 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139666559158080)>', '<ExcThread(monitor, started 139666120484608)>']
[2025-11-26 23:01:17] 2025-11-27 04:01:00,752 | INFO     | all workflow threads have been joined
[2025-11-26 23:01:17] 2025-11-27 04:01:00,752 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:01:17] 2025-11-27 04:01:00,753 | INFO     | traces error code: 0
[2025-11-26 23:01:17] 2025-11-27 04:01:00,753 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:01:17] 2025-11-27 04:01:16,296 | INFO     | PID=4009910 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 23:01:17] 2025-11-27 04:01:16,297 | INFO     | .. there are 5 such processes running
[2025-11-26 23:01:17] 2025-11-27 04:01:16,299 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:01:17] 2025-11-27 04:01:16,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:01:17] 2025-11-27 04:01:16,300 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:01:17] 2025-11-27 04:01:16,300 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:01:17] 2025-11-27 04:01:16,300 | INFO     | [monitor] control thread has ended
[2025-11-26 23:01:17] 2025-11-27 04:01:16,434 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:01:17] 2025-11-27 04:01:16,436 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:01:17] 2025-11-27 04:01:16,439 [wrapper] pilotpid: 4009910
[2025-11-26 23:01:17] 2025-11-27 04:01:16,442 [wrapper] Pilot exit status: 0
[2025-11-26 23:01:17] 2025-11-27 04:01:16,452 [wrapper] pandaids: 6896766902
[2025-11-26 23:01:17] 2025-11-27 04:01:16,510 [wrapper] cleanup supervisor_pilot  903222 4009912
[2025-11-26 23:01:17] 2025-11-27 04:01:16,512 [wrapper] Test setup, not cleaning
[2025-11-26 23:01:17] 2025-11-27 04:01:16,515 [wrapper] apfmon messages muted
[2025-11-26 23:01:17] 2025-11-27 04:01:16,518 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:01:17] 2025-11-27 04:01:16,520 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:01:17]  *** Error codes and diagnostics ***
[2025-11-26 23:01:17]     "exeErrorCode": 0,
[2025-11-26 23:01:17]     "exeErrorDiag": "",
[2025-11-26 23:01:17]     "pilotErrorCode": 0,
[2025-11-26 23:01:17]     "pilotErrorDiag": "",
[2025-11-26 23:01:17]  *** Listing of results directory ***
[2025-11-26 23:01:17] total 1314040
[2025-11-26 23:01:17] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 05:51 queuedata.json
[2025-11-26 23:01:17] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 05:51 pilot3.tar.gz
[2025-11-26 23:01:17] -rwx------ 1 boincer umatlas     36292 Nov 25 05:52 runpilot2-wrapper.sh
[2025-11-26 23:01:17] -rw-r--r-- 1 boincer umatlas       100 Nov 26 05:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:01:17] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 05:08 run_atlas
[2025-11-26 23:01:17] -rw-r--r-- 1 boincer umatlas       105 Nov 26 05:08 job.xml
[2025-11-26 23:01:17] -rw-r--r-- 2 boincer umatlas 407763282 Nov 26 05:08 EVNT.47483658._004286.pool.root.1
[2025-11-26 23:01:17] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 05:08 start_atlas.sh
[2025-11-26 23:01:17] drwxrwx--x 2 boincer umatlas      4096 Nov 26 05:08 shared
[2025-11-26 23:01:17] -rw-r--r-- 2 boincer umatlas    590095 Nov 26 05:08 input.tar.gz
[2025-11-26 23:01:17] -rw-r--r-- 1 boincer umatlas         0 Nov 26 05:08 boinc_lockfile
[2025-11-26 23:01:17] -rw-r--r-- 1 boincer umatlas      2784 Nov 26 05:08 pandaJob.out
[2025-11-26 23:01:17] -rw------- 1 boincer umatlas        57 Nov 26 05:08 setup.sh.local
[2025-11-26 23:01:17] -rw------- 1 boincer umatlas    991827 Nov 26 05:09 agis_schedconf.cvmfs.json
[2025-11-26 23:01:17] drwx------ 5 boincer umatlas      4096 Nov 26 05:09 pilot3
[2025-11-26 23:01:17] -rw-r--r-- 1 boincer umatlas       533 Nov 26 22:45 boinc_task_state.xml
[2025-11-26 23:01:17] -rw------- 1 boincer umatlas 911549466 Nov 26 22:59 HITS.47556185._000500.pool.root.1
[2025-11-26 23:01:17] -rw------- 1 boincer umatlas      1063 Nov 26 23:00 memory_monitor_summary.json
[2025-11-26 23:01:17] -rw------- 1 boincer umatlas   1516240 Nov 26 23:00 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:01:17] -rw------- 1 boincer umatlas   2251938 Nov 26 23:00 log.47556185._000500.job.log.tgz.1
[2025-11-26 23:01:17] -rw------- 1 boincer umatlas      8645 Nov 26 23:00 heartbeat.json
[2025-11-26 23:01:17] -rw-r--r-- 1 boincer umatlas      6014 Nov 26 23:00 init_data.xml
[2025-11-26 23:01:17] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 23:00 boinc_mmap_file
[2025-11-26 23:01:17] -rw-r--r-- 1 boincer umatlas        29 Nov 26 23:00 wrapper_checkpoint.txt
[2025-11-26 23:01:17] -rw------- 1 boincer umatlas        95 Nov 26 23:01 pilot_heartbeat.json
[2025-11-26 23:01:17] -rw------- 1 boincer umatlas       822 Nov 26 23:01 pilotlog.txt
[2025-11-26 23:01:17] -rw------- 1 boincer umatlas   8919437 Nov 26 23:01 log.47556185._000500.job.log.1
[2025-11-26 23:01:17] -rw------- 1 boincer umatlas       353 Nov 26 23:01 output.list
[2025-11-26 23:01:17] -rw-r--r-- 1 boincer umatlas       620 Nov 26 23:01 runtime_log
[2025-11-26 23:01:17] -rw------- 1 boincer umatlas  11192320 Nov 26 23:01 result.tar.gz
[2025-11-26 23:01:17] -rw-r--r-- 1 boincer umatlas      9338 Nov 26 23:01 runtime_log.err
[2025-11-26 23:01:17] -rw------- 1 boincer umatlas       666 Nov 26 23:01 DKMKDmMq5h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWKMKDmHrEbWn.diag
[2025-11-26 23:01:17] -rw-r--r-- 1 boincer umatlas     21760 Nov 26 23:01 stderr.txt
[2025-11-26 23:01:17] HITS file was successfully produced:
[2025-11-26 23:01:17] -rw------- 1 boincer umatlas 911549466 Nov 26 22:59 shared/HITS.pool.root.1
[2025-11-26 23:01:17]  *** Contents of shared directory: ***
[2025-11-26 23:01:17] total 1299932
[2025-11-26 23:01:17] -rw-r--r-- 2 boincer umatlas 407763282 Nov 26 05:08 ATLAS.root_0
[2025-11-26 23:01:17] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 05:08 start_atlas.sh
[2025-11-26 23:01:17] -rw-r--r-- 2 boincer umatlas    590095 Nov 26 05:08 input.tar.gz
[2025-11-26 23:01:17] -rw------- 1 boincer umatlas 911549466 Nov 26 22:59 HITS.pool.root.1
[2025-11-26 23:01:17] -rw------- 1 boincer umatlas  11192320 Nov 26 23:01 result.tar.gz
23:01:18 (4003193): run_atlas exited; CPU time 474975.591813
23:01:18 (4003193): called boinc_finish(0)

</stderr_txt>
]]>

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