Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:40:11 (3040224): wrapper (7.7.26015): starting
12:40:11 (3040224): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 12:40:11] Arguments: --nthreads 9
[2025-11-26 12:40:11] Threads: 9
[2025-11-26 12:40:11] Checking for CVMFS
[2025-11-26 12:40:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 12:40:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 12:40:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 12:40:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 12:40:12] 2.13.3.0 10982 30363 354732 153330 0 573 38233010 40960000 28060 16776704 0 150815074 99.696 119361850 39266 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 12:40:12] CVMFS is ok
[2025-11-26 12:40:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 12:40:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 12:40:12] Further information can be found at the LHC@home message board.
[2025-11-26 12:40:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 12:40:12] Checking for apptainer binary...
[2025-11-26 12:40:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 12:40:12] Running /usr/bin/apptainer --version
[2025-11-26 12:40:12] apptainer version 1.4.4-1.el9
[2025-11-26 12:40:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 12:40:13] c6-8-12-3.aglt2.org
[2025-11-26 12:40:13] apptainer works
[2025-11-26 12:40:13] Set ATHENA_PROC_NUMBER=9
[2025-11-26 12:40:13] Set ATHENA_CORE_NUMBER=9
[2025-11-26 12:40:13] Starting ATLAS job with PandaID=6896922988
[2025-11-26 12:40:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 01:31:04]  *** The last 200 lines of the pilot log: ***
[2025-11-27 01:31:04] 2025-11-27 06:30:05,387 | INFO     | time since job start (46170s) is within the limit (172800.0s)
[2025-11-27 01:31:04] 2025-11-27 06:30:06,322 | INFO     | monitor loop #2941: job 0:6896922988 is in state 'finished'
[2025-11-27 01:31:04] 2025-11-27 06:30:06,322 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:31:04] 2025-11-27 06:30:07,400 | INFO     | time since job start (46172s) is within the limit (172800.0s)
[2025-11-27 01:31:04] 2025-11-27 06:30:08,828 | INFO     | monitor loop #2942: job 0:6896922988 is in state 'finished'
[2025-11-27 01:31:04] 2025-11-27 06:30:08,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:31:04] 2025-11-27 06:30:09,411 | INFO     | time since job start (46174s) is within the limit (172800.0s)
[2025-11-27 01:31:04] 2025-11-27 06:30:11,333 | INFO     | monitor loop #2943: job 0:6896922988 is in state 'finished'
[2025-11-27 01:31:04] 2025-11-27 06:30:11,333 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:31:04] 2025-11-27 06:30:11,499 | INFO     | time since job start (46176s) is within the limit (172800.0s)
[2025-11-27 01:31:04] 2025-11-27 06:30:13,585 | INFO     | time since job start (46178s) is within the limit (172800.0s)
[2025-11-27 01:31:04] 2025-11-27 06:30:13,844 | INFO     | monitor loop #2944: job 0:6896922988 is in state 'finished'
[2025-11-27 01:31:04] 2025-11-27 06:30:13,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:31:04] 2025-11-27 06:30:15,612 | INFO     | time since job start (46180s) is within the limit (172800.0s)
[2025-11-27 01:31:04] 2025-11-27 06:30:16,352 | INFO     | monitor loop #2945: job 0:6896922988 is in state 'finished'
[2025-11-27 01:31:04] 2025-11-27 06:30:16,352 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:31:04] 2025-11-27 06:30:17,623 | INFO     | time since job start (46182s) is within the limit (172800.0s)
[2025-11-27 01:31:04] 2025-11-27 06:30:18,112 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 01:31:04] 2025-11-27 06:30:18,124 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3089.9751428571435
[2025-11-27 01:31:04] 2025-11-27 06:30:18,148 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6896922988/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 01:31:04] 2025-11-27 06:30:18,149 | INFO     | extracted standard info from prmon json
[2025-11-27 01:31:04] 2025-11-27 06:30:18,149 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 01:31:04] 2025-11-27 06:30:18,149 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 01:31:04] 2025-11-27 06:30:18,180 | INFO     | fitting pss+swap vs Time
[2025-11-27 01:31:04] 2025-11-27 06:30:18,185 | INFO     | sum of square deviations: 133984922811.73984
[2025-11-27 01:31:04] 2025-11-27 06:30:18,212 | INFO     | sum of deviations: 733340068080.74
[2025-11-27 01:31:04] 2025-11-27 06:30:18,213 | INFO     | mean x: 1764201903.9814816
[2025-11-27 01:31:04] 2025-11-27 06:30:18,213 | INFO     | mean y: 3083255.9814814813
[2025-11-27 01:31:04] 2025-11-27 06:30:18,213 | INFO     | intersect: -9652928161.003048
[2025-11-27 01:31:04] 2025-11-27 06:30:18,218 | INFO     | chi2: 13.943102753442236
[2025-11-27 01:31:04] 2025-11-27 06:30:18,220 | INFO     | sum of square deviations: 131344452095.69418
[2025-11-27 01:31:04] 2025-11-27 06:30:18,250 | INFO     | sum of deviations: 1001460401960.0133
[2025-11-27 01:31:04] 2025-11-27 06:30:18,250 | INFO     | mean x: 1764201751.491345
[2025-11-27 01:31:04] 2025-11-27 06:30:18,250 | INFO     | mean y: 3098735.8482023966
[2025-11-27 01:31:04] 2025-11-27 06:30:18,250 | INFO     | intersect: -13448388304.501646
[2025-11-27 01:31:04] 2025-11-27 06:30:18,251 | INFO     | chi2: 10.612548062293767
[2025-11-27 01:31:04] 2025-11-27 06:30:18,251 | INFO     | current chi2=10.612548062293767 (change=23.886754261537885 %)
[2025-11-27 01:31:04] 2025-11-27 06:30:18,252 | INFO     | right removable region: 750
[2025-11-27 01:31:04] 2025-11-27 06:30:18,253 | INFO     | sum of square deviations: 131343860641.65327
[2025-11-27 01:31:04] 2025-11-27 06:30:18,281 | INFO     | sum of deviations: 509100324628.22174
[2025-11-27 01:31:04] 2025-11-27 06:30:18,281 | INFO     | mean x: 1764202056.4886818
[2025-11-27 01:31:04] 2025-11-27 06:30:18,281 | INFO     | mean y: 3096182.8495339546
[2025-11-27 01:31:04] 2025-11-27 06:30:18,281 | INFO     | intersect: -6835105734.471988
[2025-11-27 01:31:04] 2025-11-27 06:30:18,282 | INFO     | chi2: 11.726066382930213
[2025-11-27 01:31:04] 2025-11-27 06:30:18,282 | INFO     | current chi2=11.726066382930213 (change=15.900595511029186 %)
[2025-11-27 01:31:04] 2025-11-27 06:30:18,283 | INFO     | left removable region: 10
[2025-11-27 01:31:04] 2025-11-27 06:30:18,288 | INFO     | sum of square deviations: 125657451944.9333
[2025-11-27 01:31:04] 2025-11-27 06:30:18,312 | INFO     | sum of deviations: 778581536676.9943
[2025-11-27 01:31:04] 2025-11-27 06:30:18,313 | INFO     | mean x: 1764202025.9905405
[2025-11-27 01:31:04] 2025-11-27 06:30:18,313 | INFO     | mean y: 3117747.285135135
[2025-11-27 01:31:04] 2025-11-27 06:30:18,313 | INFO     | intersect: -10927989824.483244
[2025-11-27 01:31:04] 2025-11-27 06:30:18,314 | INFO     | chi2: 7.745797875461534
[2025-11-27 01:31:04] 2025-11-27 06:30:18,314 | INFO     | current memory leak: 6.20 B/s (using 740 data points, chi2=7.75)
[2025-11-27 01:31:04] 2025-11-27 06:30:18,320 | INFO     | could have reported an average CPU frequency of 3002 MHz (29 samples)
[2025-11-27 01:31:04] 2025-11-27 06:30:18,320 | INFO     | ..............................
[2025-11-27 01:31:04] 2025-11-27 06:30:18,320 | INFO     | . Timing measurements:
[2025-11-27 01:31:04] 2025-11-27 06:30:18,320 | INFO     | . get job = 0 s
[2025-11-27 01:31:04] 2025-11-27 06:30:18,320 | INFO     | . initial setup = 3 s
[2025-11-27 01:31:04] 2025-11-27 06:30:18,320 | INFO     | . payload setup = 11 s
[2025-11-27 01:31:04] 2025-11-27 06:30:18,320 | INFO     | . stage-in = 0 s
[2025-11-27 01:31:04] 2025-11-27 06:30:18,320 | INFO     | . payload execution = 46096 s
[2025-11-27 01:31:04] 2025-11-27 06:30:18,321 | INFO     | . stage-out = 11 s
[2025-11-27 01:31:04] 2025-11-27 06:30:18,321 | INFO     | . log creation = 3 s
[2025-11-27 01:31:04] 2025-11-27 06:30:18,321 | INFO     | ..............................
[2025-11-27 01:31:04] 2025-11-27 06:30:18,509 | INFO     | 
[2025-11-27 01:31:04] 2025-11-27 06:30:18,509 | INFO     | job summary report
[2025-11-27 01:31:04] 2025-11-27 06:30:18,510 | INFO     | --------------------------------------------------
[2025-11-27 01:31:04] 2025-11-27 06:30:18,510 | INFO     | PanDA job id: 6896922988
[2025-11-27 01:31:04] 2025-11-27 06:30:18,510 | INFO     | task id: 47556173
[2025-11-27 01:31:04] 2025-11-27 06:30:18,510 | INFO     | errors: (none)
[2025-11-27 01:31:04] 2025-11-27 06:30:18,510 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 01:31:04] 2025-11-27 06:30:18,510 | INFO     | pilot state: finished 
[2025-11-27 01:31:04] 2025-11-27 06:30:18,510 | INFO     | transexitcode: 0
[2025-11-27 01:31:04] 2025-11-27 06:30:18,510 | INFO     | exeerrorcode: 0
[2025-11-27 01:31:04] 2025-11-27 06:30:18,510 | INFO     | exeerrordiag: 
[2025-11-27 01:31:04] 2025-11-27 06:30:18,510 | INFO     | exitcode: 0
[2025-11-27 01:31:04] 2025-11-27 06:30:18,510 | INFO     | exitmsg: OK
[2025-11-27 01:31:04] 2025-11-27 06:30:18,510 | INFO     | cpuconsumptiontime: 228367 s
[2025-11-27 01:31:04] 2025-11-27 06:30:18,510 | INFO     | nevents: 1000
[2025-11-27 01:31:04] 2025-11-27 06:30:18,510 | INFO     | neventsw: 0
[2025-11-27 01:31:04] 2025-11-27 06:30:18,511 | INFO     | pid: 3050910
[2025-11-27 01:31:04] 2025-11-27 06:30:18,511 | INFO     | pgrp: 3050910
[2025-11-27 01:31:04] 2025-11-27 06:30:18,511 | INFO     | corecount: 9
[2025-11-27 01:31:04] 2025-11-27 06:30:18,511 | INFO     | event service: False
[2025-11-27 01:31:04] 2025-11-27 06:30:18,511 | INFO     | sizes: {0: 2284035, 1: 2284290, 10: 2284552, 12: 2284580, 46110: 2331109, 46122: 2340315, 46163: 2340505}
[2025-11-27 01:31:04] 2025-11-27 06:30:18,511 | INFO     | --------------------------------------------------
[2025-11-27 01:31:04] 2025-11-27 06:30:18,511 | INFO     | 
[2025-11-27 01:31:04] 2025-11-27 06:30:18,511 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 01:31:04] 2025-11-27 06:30:18,564 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 01:31:04] 2025-11-27 06:30:18,565 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 01:31:04] 2025-11-27 06:30:18,565 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 01:31:04] 2025-11-27 06:30:18,565 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 01:31:04] 2025-11-27 06:30:18,565 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 01:31:04] 2025-11-27 06:30:18,565 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 01:31:04] 2025-11-27 06:30:18,565 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 01:31:04] 2025-11-27 06:30:18,565 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 01:31:04] 2025-11-27 06:30:18,565 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 01:31:04] 2025-11-27 06:30:18,565 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 01:31:04] 2025-11-27 06:30:18,565 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 01:31:04] 2025-11-27 06:30:18,565 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 01:31:04] 2025-11-27 06:30:18,565 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 01:31:04] 2025-11-27 06:30:18,566 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 01:31:04] 2025-11-27 06:30:18,566 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 01:31:04] 2025-11-27 06:30:18,566 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 01:31:04] 2025-11-27 06:30:18,570 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 01:31:04] 2025-11-27 06:30:18,570 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 01:31:04] 2025-11-27 06:30:18,570 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 01:31:04] 2025-11-27 06:30:18,570 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 01:31:04] 2025-11-27 06:30:18,570 | INFO     | job 6896922988 has completed (purged errors)
[2025-11-27 01:31:04] 2025-11-27 06:30:18,571 | INFO     | overall cleanup function is called
[2025-11-27 01:31:04] 2025-11-27 06:30:19,624 | INFO     | --- collectZombieJob: --- 10, [3050910]
[2025-11-27 01:31:04] 2025-11-27 06:30:19,625 | INFO     | zombie collector waiting for pid 3050910
[2025-11-27 01:31:04] 2025-11-27 06:30:19,625 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 01:31:04] 2025-11-27 06:30:19,625 | INFO     | collected zombie processes
[2025-11-27 01:31:04] 2025-11-27 06:30:19,625 | INFO     | will attempt to kill all subprocesses of pid=3050910
[2025-11-27 01:31:04] 2025-11-27 06:30:21,060 | INFO     | process IDs to be killed: [3050910] (in reverse order)
[2025-11-27 01:31:04] 2025-11-27 06:30:21,308 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 01:31:04] 2025-11-27 06:30:21,311 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 01:31:04] 2025-11-27 06:30:21,332 | INFO     | did not find any defunct processes belonging to 3050910
[2025-11-27 01:31:04] 2025-11-27 06:30:21,350 | INFO     | did not find any defunct processes belonging to 3050910
[2025-11-27 01:31:04] 2025-11-27 06:30:21,371 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 01:31:04] 2025-11-27 06:30:21,371 | INFO     | ready for new job
[2025-11-27 01:31:04] 2025-11-27 06:30:21,371 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 01:31:04] 2025-11-27 06:30:21,383 | INFO     | ***************************************
[2025-11-27 01:31:04] 2025-11-27 06:30:21,383 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 01:31:04] 2025-11-27 06:30:21,383 | INFO     | ***************************************
[2025-11-27 01:31:04] 2025-11-27 06:30:21,383 | INFO     | 
[2025-11-27 01:31:04] 2025-11-27 06:30:21,386 | INFO     | architecture information:
[2025-11-27 01:31:04] 2025-11-27 06:30:21,394 | INFO     | executing command: cat /etc/os-release
[2025-11-27 01:31:04] 2025-11-27 06:30:21,482 | INFO     | cat /etc/os-release:
[2025-11-27 01:31:04] NAME="CentOS Linux"
[2025-11-27 01:31:04] VERSION="7 (Core)"
[2025-11-27 01:31:04] ID="centos"
[2025-11-27 01:31:04] ID_LIKE="rhel fedora"
[2025-11-27 01:31:04] VERSION_ID="7"
[2025-11-27 01:31:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 01:31:04] ANSI_COLOR="0;31"
[2025-11-27 01:31:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 01:31:04] HOME_URL="https://www.centos.org/"
[2025-11-27 01:31:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 01:31:04] 
[2025-11-27 01:31:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 01:31:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 01:31:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 01:31:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 01:31:04] 
[2025-11-27 01:31:04] 2025-11-27 06:30:21,483 | INFO     | ***************************************
[2025-11-27 01:31:04] 2025-11-27 06:30:21,986 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 01:31:04] 2025-11-27 06:30:22,048 | INFO     | sufficient remaining disk space (48527048704 B)
[2025-11-27 01:31:04] 2025-11-27 06:30:22,049 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 01:31:04] 2025-11-27 06:30:22,049 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 01:31:04] 2025-11-27 06:30:22,049 | INFO     | update_server=False
[2025-11-27 01:31:04] 2025-11-27 06:30:22,049 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 01:31:04] 2025-11-27 06:30:22,414 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:31:04] 2025-11-27 06:30:22,414 | INFO     | aborting loop
[2025-11-27 01:31:04] 2025-11-27 06:30:22,590 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 01:31:04] 2025-11-27 06:30:22,910 | INFO     | all payload control threads have been joined
[2025-11-27 01:31:04] 2025-11-27 06:30:23,014 | INFO     | all data control threads have been joined
[2025-11-27 01:31:04] 2025-11-27 06:30:23,055 | INFO     | [job] retrieve thread has finished
[2025-11-27 01:31:04] 2025-11-27 06:30:23,322 | INFO     | all job control threads have been joined
[2025-11-27 01:31:04] 2025-11-27 06:30:23,381 | INFO     | [payload] validate_post thread has finished
[2025-11-27 01:31:04] 2025-11-27 06:30:23,428 | INFO     | [job] job monitor thread has finished
[2025-11-27 01:31:04] 2025-11-27 06:30:23,590 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:31:04] 2025-11-27 06:30:23,590 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 01:31:04] 2025-11-27 06:30:23,797 | INFO     | [payload] failed_post thread has finished
[2025-11-27 01:31:04] 2025-11-27 06:30:23,926 | INFO     | [payload] control thread has finished
[2025-11-27 01:31:04] 2025-11-27 06:30:24,008 | INFO     | [job] validate thread has finished
[2025-11-27 01:31:04] 2025-11-27 06:30:24,020 | INFO     | [data] control thread has finished
[2025-11-27 01:31:04] 2025-11-27 06:30:24,121 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 01:31:04] 2025-11-27 06:30:24,218 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 01:31:04] 2025-11-27 06:30:24,328 | INFO     | [job] control thread has finished
[2025-11-27 01:31:04] 2025-11-27 06:30:24,382 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 01:31:04] 2025-11-27 06:30:24,390 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 01:31:04] 2025-11-27 06:30:24,399 | INFO     | [data] copytool_in thread has finished
[2025-11-27 01:31:04] 2025-11-27 06:30:24,596 | INFO     | [job] queue monitor thread has finished
[2025-11-27 01:31:04] 2025-11-27 06:30:24,597 | INFO     | [data] copytool_out thread has finished
[2025-11-27 01:31:04] 2025-11-27 06:30:28,130 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 01:31:04] 2025-11-27 06:30:54,582 | INFO     | PID=3043908 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 01:31:04] 2025-11-27 06:30:54,583 | INFO     | .. there are 40 such processes running
[2025-11-27 01:31:04] 2025-11-27 06:30:54,583 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 01:31:04] 2025-11-27 06:30:54,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 01:31:04] 2025-11-27 06:30:54,583 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 01:31:04] 2025-11-27 06:30:54,951 | INFO     | [monitor] cgroup control has ended
[2025-11-27 01:31:04] 2025-11-27 06:30:56,573 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140525135443776)>', '<ExcThread(monitor, started 140524770006784)>']
[2025-11-27 01:31:04] 2025-11-27 06:30:56,595 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 01:31:04] 2025-11-27 06:30:56,595 | INFO     | [monitor] control thread has ended
[2025-11-27 01:31:04] 2025-11-27 06:31:01,612 | INFO     | all workflow threads have been joined
[2025-11-27 01:31:04] 2025-11-27 06:31:01,612 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 01:31:04] 2025-11-27 06:31:01,613 | INFO     | traces error code: 0
[2025-11-27 01:31:04] 2025-11-27 06:31:01,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 01:31:04] 2025-11-27 06:31:03,038 [wrapper] ==== pilot stdout END ====
[2025-11-27 01:31:04] 2025-11-27 06:31:03,070 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 01:31:04] 2025-11-27 06:31:03,102 [wrapper] pilotpid: 3043908
[2025-11-27 01:31:04] 2025-11-27 06:31:03,125 [wrapper] Pilot exit status: 0
[2025-11-27 01:31:04] 2025-11-27 06:31:03,215 [wrapper] pandaids: 6896922988
[2025-11-27 01:31:04] 2025-11-27 06:31:03,614 [wrapper] cleanup supervisor_pilot 2047059 3043909
[2025-11-27 01:31:04] 2025-11-27 06:31:03,631 [wrapper] Test setup, not cleaning
[2025-11-27 01:31:04] 2025-11-27 06:31:03,649 [wrapper] apfmon messages muted
[2025-11-27 01:31:04] 2025-11-27 06:31:03,675 [wrapper] ==== wrapper stdout END ====
[2025-11-27 01:31:04] 2025-11-27 06:31:03,697 [wrapper] ==== wrapper stderr END ====
[2025-11-27 01:31:04]  *** Error codes and diagnostics ***
[2025-11-27 01:31:04]     "exeErrorCode": 0,
[2025-11-27 01:31:04]     "exeErrorDiag": "",
[2025-11-27 01:31:04]     "pilotErrorCode": 0,
[2025-11-27 01:31:04]     "pilotErrorDiag": "",
[2025-11-27 01:31:04]  *** Listing of results directory ***
[2025-11-27 01:31:04] total 1309068
[2025-11-27 01:31:04] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 05:51 pilot3.tar.gz
[2025-11-27 01:31:04] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 06:21 queuedata.json
[2025-11-27 01:31:04] -rwx------. 1 boincer umatlas     36292 Nov 25 06:23 runpilot2-wrapper.sh
[2025-11-27 01:31:04] -rw-r--r--. 1 boincer umatlas       100 Nov 26 12:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 01:31:04] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 12:40 run_atlas
[2025-11-27 01:31:04] -rw-r--r--. 1 boincer umatlas       105 Nov 26 12:40 job.xml
[2025-11-27 01:31:04] -rw-r--r--. 2 boincer umatlas 410309399 Nov 26 12:40 EVNT.47483658._003077.pool.root.1
[2025-11-27 01:31:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 12:40 start_atlas.sh
[2025-11-27 01:31:04] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 12:40 shared
[2025-11-27 01:31:04] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 12:40 input.tar.gz
[2025-11-27 01:31:04] -rw-r--r--. 1 boincer umatlas         0 Nov 26 12:40 boinc_lockfile
[2025-11-27 01:31:04] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 12:40 pandaJob.out
[2025-11-27 01:31:04] -rw-------. 1 boincer umatlas        57 Nov 26 12:40 setup.sh.local
[2025-11-27 01:31:04] -rw-------. 1 boincer umatlas    991530 Nov 26 12:40 agis_schedconf.cvmfs.json
[2025-11-27 01:31:04] drwx------. 5 boincer umatlas      4096 Nov 26 12:40 pilot3
[2025-11-27 01:31:04] -rw-r--r--. 1 boincer umatlas       533 Nov 27 01:08 boinc_task_state.xml
[2025-11-27 01:31:04] -rw-------. 1 boincer umatlas 909959551 Nov 27 01:27 HITS.47556173._000595.pool.root.1
[2025-11-27 01:31:04] -rw-------. 1 boincer umatlas      1058 Nov 27 01:29 memory_monitor_summary.json
[2025-11-27 01:31:04] -rw-------. 1 boincer umatlas   1516240 Nov 27 01:29 agis_ddmendpoints.agis.ALL.json
[2025-11-27 01:31:04] -rw-------. 1 boincer umatlas   2092356 Nov 27 01:29 log.47556173._000595.job.log.tgz.1
[2025-11-27 01:31:04] -rw-------. 1 boincer umatlas        95 Nov 27 01:30 pilot_heartbeat.json
[2025-11-27 01:31:04] -rw-r--r--. 1 boincer umatlas      6844 Nov 27 01:30 init_data.xml
[2025-11-27 01:31:04] -rw-------. 1 boincer umatlas      8621 Nov 27 01:30 heartbeat.json
[2025-11-27 01:31:04] -rw-------. 1 boincer umatlas      4824 Nov 27 01:31 pilotlog.txt
[2025-11-27 01:31:04] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 01:31 boinc_mmap_file
[2025-11-27 01:31:04] -rw-r--r--. 1 boincer umatlas        29 Nov 27 01:31 wrapper_checkpoint.txt
[2025-11-27 01:31:04] -rw-------. 1 boincer umatlas   6055768 Nov 27 01:31 log.47556173._000595.job.log.1
[2025-11-27 01:31:04] -rw-------. 1 boincer umatlas       353 Nov 27 01:31 output.list
[2025-11-27 01:31:04] -rw-r--r--. 1 boincer umatlas       620 Nov 27 01:31 runtime_log
[2025-11-27 01:31:04] -rw-------. 1 boincer umatlas   8171520 Nov 27 01:31 result.tar.gz
[2025-11-27 01:31:04] -rw-------. 1 boincer umatlas       662 Nov 27 01:31 SXTKDmTK6h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwRJKDmR4z9Hn.diag
[2025-11-27 01:31:04] -rw-r--r--. 1 boincer umatlas      9348 Nov 27 01:31 runtime_log.err
[2025-11-27 01:31:04] -rw-r--r--. 1 boincer umatlas     13277 Nov 27 01:31 stderr.txt
[2025-11-27 01:31:04] HITS file was successfully produced:
[2025-11-27 01:31:04] -rw-------. 1 boincer umatlas 909959551 Nov 27 01:27 shared/HITS.pool.root.1
[2025-11-27 01:31:04]  *** Contents of shared directory: ***
[2025-11-27 01:31:04] total 1297916
[2025-11-27 01:31:04] -rw-r--r--. 2 boincer umatlas 410309399 Nov 26 12:40 ATLAS.root_0
[2025-11-27 01:31:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 12:40 start_atlas.sh
[2025-11-27 01:31:04] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 12:40 input.tar.gz
[2025-11-27 01:31:04] -rw-------. 1 boincer umatlas 909959551 Nov 27 01:27 HITS.pool.root.1
[2025-11-27 01:31:04] -rw-------. 1 boincer umatlas   8171520 Nov 27 01:31 result.tar.gz
01:31:06 (3040224): run_atlas exited; CPU time 229630.515876
01:31:06 (3040224): called boinc_finish(0)

</stderr_txt>
]]>

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