Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:38:53 (31899): wrapper (7.7.26015): starting
04:38:53 (31899): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 04:38:53] Arguments: --nthreads 8
[2025-11-26 04:38:53] Threads: 8
[2025-11-26 04:38:53] Checking for CVMFS
[2025-11-26 04:38:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 04:38:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 04:38:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 04:38:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 04:38:53] 2.11.2.0 2918 142316 88072 153316 3 82 17767691 20275200 1 130560 0 53231750 99.935 6479958 35175 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 04:38:53] CVMFS is ok
[2025-11-26 04:38:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 04:38:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 04:38:53] Further information can be found at the LHC@home message board.
[2025-11-26 04:38:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 04:38:53] Checking for apptainer binary...
[2025-11-26 04:38:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 04:38:53] Running /usr/bin/apptainer --version
[2025-11-26 04:38:53] apptainer version 1.3.2-1.el7
[2025-11-26 04:38:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 04:38:55] c-115-8.aglt2.org
[2025-11-26 04:38:55] apptainer works
[2025-11-26 04:38:55] Set ATHENA_PROC_NUMBER=8
[2025-11-26 04:38:55] Set ATHENA_CORE_NUMBER=8
[2025-11-26 04:38:55] Starting ATLAS job with PandaID=6896924091
[2025-11-26 04:38:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 15:47:25]  *** The last 200 lines of the pilot log: ***
[2025-11-26 15:47:25] 2025-11-26 20:46:43,345 | INFO     | time since job start (40050s) is within the limit (172800.0s)
[2025-11-26 15:47:25] 2025-11-26 20:46:43,365 | INFO     | monitor loop #2953: job 0:6896924091 is in state 'finished'
[2025-11-26 15:47:25] 2025-11-26 20:46:43,366 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 15:47:25] 2025-11-26 20:46:45,148 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 15:47:25] 2025-11-26 20:46:45,152 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-26 15:47:25] 2025-11-26 20:46:45,155 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896924091/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 15:47:25] 2025-11-26 20:46:45,156 | INFO     | extracted standard info from prmon json
[2025-11-26 15:47:25] 2025-11-26 20:46:45,156 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 15:47:25] 2025-11-26 20:46:45,156 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 15:47:25] 2025-11-26 20:46:45,169 | INFO     | fitting pss+swap vs Time
[2025-11-26 15:47:25] 2025-11-26 20:46:45,170 | INFO     | sum of square deviations: 87536620127.24239
[2025-11-26 15:47:25] 2025-11-26 20:46:45,179 | INFO     | sum of deviations: 551732143519.5808
[2025-11-26 15:47:25] 2025-11-26 20:46:45,179 | INFO     | mean x: 1764169963.144817
[2025-11-26 15:47:25] 2025-11-26 20:46:45,179 | INFO     | mean y: 3260538.2149390243
[2025-11-26 15:47:25] 2025-11-26 20:46:45,179 | INFO     | intersect: -11116077561.472925
[2025-11-26 15:47:25] 2025-11-26 20:46:45,180 | INFO     | chi2: 6.670738279661877
[2025-11-26 15:47:25] 2025-11-26 20:46:45,180 | INFO     | sum of square deviations: 85550367710.14748
[2025-11-26 15:47:25] 2025-11-26 20:46:45,189 | INFO     | sum of deviations: 798215085197.1854
[2025-11-26 15:47:25] 2025-11-26 20:46:45,189 | INFO     | mean x: 1764169810.6497695
[2025-11-26 15:47:25] 2025-11-26 20:46:45,189 | INFO     | mean y: 3279456.228878648
[2025-11-26 15:47:25] 2025-11-26 20:46:45,189 | INFO     | intersect: -16457046704.859938
[2025-11-26 15:47:25] 2025-11-26 20:46:45,190 | INFO     | chi2: 3.513129399096551
[2025-11-26 15:47:25] 2025-11-26 20:46:45,190 | INFO     | current chi2=3.513129399096551 (change=47.33522360174768 %)
[2025-11-26 15:47:25] 2025-11-26 20:46:45,191 | INFO     | sum of square deviations: 83594394930.52022
[2025-11-26 15:47:25] 2025-11-26 20:46:45,199 | INFO     | sum of deviations: 907292632206.081
[2025-11-26 15:47:25] 2025-11-26 20:46:45,199 | INFO     | mean x: 1764169658.1547987
[2025-11-26 15:47:25] 2025-11-26 20:46:45,199 | INFO     | mean y: 3287951.6191950464
[2025-11-26 15:47:25] 2025-11-26 20:46:45,199 | INFO     | intersect: -19144145726.62836
[2025-11-26 15:47:25] 2025-11-26 20:46:45,200 | INFO     | chi2: 2.7930429220991932
[2025-11-26 15:47:25] 2025-11-26 20:46:45,200 | INFO     | current chi2=2.7930429220991932 (change=20.497009793676767 %)
[2025-11-26 15:47:25] 2025-11-26 20:46:45,200 | INFO     | right removable region: 645
[2025-11-26 15:47:25] 2025-11-26 20:46:45,201 | INFO     | sum of square deviations: 85550149452.44528
[2025-11-26 15:47:25] 2025-11-26 20:46:45,209 | INFO     | sum of deviations: 337613372925.2507
[2025-11-26 15:47:25] 2025-11-26 20:46:45,209 | INFO     | mean x: 1764170115.6482334
[2025-11-26 15:47:25] 2025-11-26 20:46:45,209 | INFO     | mean y: 3276945.826420891
[2025-11-26 15:47:25] 2025-11-26 20:46:45,210 | INFO     | intersect: -6958808181.669582
[2025-11-26 15:47:25] 2025-11-26 20:46:45,210 | INFO     | chi2: 4.166108106413713
[2025-11-26 15:47:25] 2025-11-26 20:46:45,210 | INFO     | current chi2=4.166108106413713 (change=37.54652136307644 %)
[2025-11-26 15:47:25] 2025-11-26 20:46:45,211 | INFO     | sum of square deviations: 83593958659.1314
[2025-11-26 15:47:25] 2025-11-26 20:46:45,219 | INFO     | sum of deviations: 299957970850.1149
[2025-11-26 15:47:25] 2025-11-26 20:46:45,219 | INFO     | mean x: 1764170268.151703
[2025-11-26 15:47:25] 2025-11-26 20:46:45,220 | INFO     | mean y: 3279878.8049535602
[2025-11-26 15:47:25] 2025-11-26 20:46:45,220 | INFO     | intersect: -6327045211.153963
[2025-11-26 15:47:25] 2025-11-26 20:46:45,220 | INFO     | chi2: 4.128420159544856
[2025-11-26 15:47:25] 2025-11-26 20:46:45,221 | INFO     | current chi2=4.128420159544856 (change=0.9046319948067748 %)
[2025-11-26 15:47:25] 2025-11-26 20:46:45,221 | INFO     | left removable region: 20
[2025-11-26 15:47:25] 2025-11-26 20:46:45,221 | INFO     | sum of square deviations: 75703878850.44157
[2025-11-26 15:47:25] 2025-11-26 20:46:45,229 | INFO     | sum of deviations: 625653713998.7875
[2025-11-26 15:47:25] 2025-11-26 20:46:45,229 | INFO     | mean x: 1764170237.6688
[2025-11-26 15:47:25] 2025-11-26 20:46:45,229 | INFO     | mean y: 3312909.1584
[2025-11-26 15:47:25] 2025-11-26 20:46:45,229 | INFO     | intersect: -14576648885.192516
[2025-11-26 15:47:25] 2025-11-26 20:46:45,230 | INFO     | chi2: 0.13010632455380744
[2025-11-26 15:47:25] 2025-11-26 20:46:45,230 | INFO     | current memory leak: 8.26 B/s (using 625 data points, chi2=0.13)
[2025-11-26 15:47:25] 2025-11-26 20:46:45,231 | INFO     | could have reported an average CPU frequency of 2393 MHz (25 samples)
[2025-11-26 15:47:25] 2025-11-26 20:46:45,231 | INFO     | ..............................
[2025-11-26 15:47:25] 2025-11-26 20:46:45,231 | INFO     | . Timing measurements:
[2025-11-26 15:47:25] 2025-11-26 20:46:45,231 | INFO     | . get job = 0 s
[2025-11-26 15:47:25] 2025-11-26 20:46:45,231 | INFO     | . initial setup = 2 s
[2025-11-26 15:47:25] 2025-11-26 20:46:45,231 | INFO     | . payload setup = 9 s
[2025-11-26 15:47:25] 2025-11-26 20:46:45,231 | INFO     | . stage-in = 0 s
[2025-11-26 15:47:25] 2025-11-26 20:46:45,232 | INFO     | . payload execution = 40008 s
[2025-11-26 15:47:25] 2025-11-26 20:46:45,232 | INFO     | . stage-out = 3 s
[2025-11-26 15:47:25] 2025-11-26 20:46:45,232 | INFO     | . log creation = 0 s
[2025-11-26 15:47:25] 2025-11-26 20:46:45,232 | INFO     | ..............................
[2025-11-26 15:47:25] 2025-11-26 20:46:45,320 | INFO     | 
[2025-11-26 15:47:25] 2025-11-26 20:46:45,320 | INFO     | job summary report
[2025-11-26 15:47:25] 2025-11-26 20:46:45,320 | INFO     | --------------------------------------------------
[2025-11-26 15:47:25] 2025-11-26 20:46:45,320 | INFO     | PanDA job id: 6896924091
[2025-11-26 15:47:25] 2025-11-26 20:46:45,321 | INFO     | task id: 47556161
[2025-11-26 15:47:25] 2025-11-26 20:46:45,321 | INFO     | errors: (none)
[2025-11-26 15:47:25] 2025-11-26 20:46:45,321 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 15:47:25] 2025-11-26 20:46:45,321 | INFO     | pilot state: finished 
[2025-11-26 15:47:25] 2025-11-26 20:46:45,321 | INFO     | transexitcode: 0
[2025-11-26 15:47:25] 2025-11-26 20:46:45,322 | INFO     | exeerrorcode: 0
[2025-11-26 15:47:25] 2025-11-26 20:46:45,322 | INFO     | exeerrordiag: 
[2025-11-26 15:47:25] 2025-11-26 20:46:45,322 | INFO     | exitcode: 0
[2025-11-26 15:47:25] 2025-11-26 20:46:45,322 | INFO     | exitmsg: OK
[2025-11-26 15:47:25] 2025-11-26 20:46:45,322 | INFO     | cpuconsumptiontime: 309745 s
[2025-11-26 15:47:25] 2025-11-26 20:46:45,322 | INFO     | nevents: 1000
[2025-11-26 15:47:25] 2025-11-26 20:46:45,323 | INFO     | neventsw: 0
[2025-11-26 15:47:25] 2025-11-26 20:46:45,323 | INFO     | pid: 9983
[2025-11-26 15:47:25] 2025-11-26 20:46:45,323 | INFO     | pgrp: 9983
[2025-11-26 15:47:25] 2025-11-26 20:46:45,323 | INFO     | corecount: 8
[2025-11-26 15:47:25] 2025-11-26 20:46:45,323 | INFO     | event service: False
[2025-11-26 15:47:25] 2025-11-26 20:46:45,323 | INFO     | sizes: {0: 2284150, 1: 2284292, 6: 2284554, 11: 2284582, 40020: 2328143, 40021: 2328142, 40025: 2337320, 40029: 2337376, 40034: 2337686}
[2025-11-26 15:47:25] 2025-11-26 20:46:45,324 | INFO     | --------------------------------------------------
[2025-11-26 15:47:25] 2025-11-26 20:46:45,324 | INFO     | 
[2025-11-26 15:47:25] 2025-11-26 20:46:45,324 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 15:47:25] 2025-11-26 20:46:45,350 | INFO     | time since job start (40052s) is within the limit (172800.0s)
[2025-11-26 15:47:25] 2025-11-26 20:46:45,354 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 15:47:25] 2025-11-26 20:46:45,355 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 15:47:25] 2025-11-26 20:46:45,355 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 15:47:25] 2025-11-26 20:46:45,355 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 15:47:25] 2025-11-26 20:46:45,355 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 15:47:25] 2025-11-26 20:46:45,355 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 15:47:25] 2025-11-26 20:46:45,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 15:47:25] 2025-11-26 20:46:45,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 15:47:25] 2025-11-26 20:46:45,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 15:47:25] 2025-11-26 20:46:45,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 15:47:25] 2025-11-26 20:46:45,356 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 15:47:25] 2025-11-26 20:46:45,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 15:47:25] 2025-11-26 20:46:45,357 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 15:47:25] 2025-11-26 20:46:45,357 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 15:47:25] 2025-11-26 20:46:45,357 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 15:47:25] 2025-11-26 20:46:45,357 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 15:47:25] 2025-11-26 20:46:45,357 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 15:47:25] 2025-11-26 20:46:45,357 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 15:47:25] 2025-11-26 20:46:45,358 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 15:47:25] 2025-11-26 20:46:45,358 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 15:47:25] 2025-11-26 20:46:45,358 | INFO     | job 6896924091 has completed (purged errors)
[2025-11-26 15:47:25] 2025-11-26 20:46:45,358 | INFO     | overall cleanup function is called
[2025-11-26 15:47:25] 2025-11-26 20:46:46,369 | INFO     | --- collectZombieJob: --- 10, [9983]
[2025-11-26 15:47:25] 2025-11-26 20:46:46,370 | INFO     | zombie collector waiting for pid 9983
[2025-11-26 15:47:25] 2025-11-26 20:46:46,370 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 15:47:25] 2025-11-26 20:46:46,370 | INFO     | collected zombie processes
[2025-11-26 15:47:25] 2025-11-26 20:46:46,370 | INFO     | will attempt to kill all subprocesses of pid=9983
[2025-11-26 15:47:25] 2025-11-26 20:46:46,457 | INFO     | process IDs to be killed: [9983] (in reverse order)
[2025-11-26 15:47:25] 2025-11-26 20:46:46,514 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 15:47:25] 2025-11-26 20:46:46,515 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 15:47:25] 2025-11-26 20:46:46,519 | INFO     | did not find any defunct processes belonging to 9983
[2025-11-26 15:47:25] 2025-11-26 20:46:46,523 | INFO     | did not find any defunct processes belonging to 9983
[2025-11-26 15:47:25] 2025-11-26 20:46:46,526 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 15:47:25] 2025-11-26 20:46:46,526 | INFO     | ready for new job
[2025-11-26 15:47:25] 2025-11-26 20:46:46,526 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 15:47:25] 2025-11-26 20:46:46,530 | INFO     | ***************************************
[2025-11-26 15:47:25] 2025-11-26 20:46:46,530 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 15:47:25] 2025-11-26 20:46:46,530 | INFO     | ***************************************
[2025-11-26 15:47:25] 2025-11-26 20:46:46,530 | INFO     | 
[2025-11-26 15:47:25] 2025-11-26 20:46:46,531 | INFO     | architecture information:
[2025-11-26 15:47:25] 2025-11-26 20:46:46,532 | INFO     | executing command: cat /etc/os-release
[2025-11-26 15:47:25] 2025-11-26 20:46:46,551 | INFO     | cat /etc/os-release:
[2025-11-26 15:47:25] NAME="CentOS Linux"
[2025-11-26 15:47:25] VERSION="7 (Core)"
[2025-11-26 15:47:25] ID="centos"
[2025-11-26 15:47:25] ID_LIKE="rhel fedora"
[2025-11-26 15:47:25] VERSION_ID="7"
[2025-11-26 15:47:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 15:47:25] ANSI_COLOR="0;31"
[2025-11-26 15:47:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 15:47:25] HOME_URL="https://www.centos.org/"
[2025-11-26 15:47:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 15:47:25] 
[2025-11-26 15:47:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 15:47:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 15:47:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 15:47:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 15:47:25] 
[2025-11-26 15:47:25] 2025-11-26 20:46:46,551 | INFO     | ***************************************
[2025-11-26 15:47:25] 2025-11-26 20:46:47,055 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 15:47:25] 2025-11-26 20:46:47,076 | INFO     | sufficient remaining disk space (17476616192 B)
[2025-11-26 15:47:25] 2025-11-26 20:46:47,077 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 15:47:25] 2025-11-26 20:46:47,077 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 15:47:25] 2025-11-26 20:46:47,077 | INFO     | update_server=False
[2025-11-26 15:47:25] 2025-11-26 20:46:47,078 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 15:47:25] 2025-11-26 20:46:47,078 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 15:47:25] 2025-11-26 20:46:47,078 | INFO     | aborting loop
[2025-11-26 15:47:25] 2025-11-26 20:46:47,078 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 15:47:25] 2025-11-26 20:46:47,079 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 15:47:25] 2025-11-26 20:46:47,080 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 15:47:25] 2025-11-26 20:46:47,081 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 15:47:25] 2025-11-26 20:46:47,081 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 15:47:25] 2025-11-26 20:46:47,081 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 15:47:25] 2025-11-26 20:46:47,356 | INFO     | all data control threads have been joined
[2025-11-26 15:47:25] 2025-11-26 20:46:47,475 | INFO     | all job control threads have been joined
[2025-11-26 15:47:25] 2025-11-26 20:46:48,083 | INFO     | [job] retrieve thread has finished
[2025-11-26 15:47:25] 2025-11-26 20:46:48,084 | INFO     | [job] job monitor thread has finished
[2025-11-26 15:47:25] 2025-11-26 20:46:48,085 | INFO     | [job] queue monitor thread has finished
[2025-11-26 15:47:25] 2025-11-26 20:46:48,102 | INFO     | [payload] failed_post thread has finished
[2025-11-26 15:47:25] 2025-11-26 20:46:48,358 | INFO     | [data] control thread has finished
[2025-11-26 15:47:25] 2025-11-26 20:46:48,369 | INFO     | all payload control threads have been joined
[2025-11-26 15:47:25] 2025-11-26 20:46:48,481 | INFO     | [job] control thread has finished
[2025-11-26 15:47:25] 2025-11-26 20:46:48,531 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 15:47:25] 2025-11-26 20:46:48,571 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 15:47:25] 2025-11-26 20:46:48,706 | INFO     | [payload] validate_post thread has finished
[2025-11-26 15:47:25] 2025-11-26 20:46:48,796 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 15:47:25] 2025-11-26 20:46:48,897 | INFO     | [job] validate thread has finished
[2025-11-26 15:47:25] 2025-11-26 20:46:48,927 | INFO     | [data] copytool_in thread has finished
[2025-11-26 15:47:25] 2025-11-26 20:46:49,086 | INFO     | [data] copytool_out thread has finished
[2025-11-26 15:47:25] 2025-11-26 20:46:49,372 | INFO     | [payload] control thread has finished
[2025-11-26 15:47:25] 2025-11-26 20:46:49,575 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 15:47:25] 2025-11-26 20:46:49,915 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 15:47:25] 2025-11-26 20:46:53,921 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 15:47:25] 2025-11-26 20:47:19,423 | INFO     | [monitor] cgroup control has ended
[2025-11-26 15:47:25] 2025-11-26 20:47:20,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140161944250176)>', '<ExcThread(monitor, started 140161274861312)>']
[2025-11-26 15:47:25] 2025-11-26 20:47:21,250 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 15:47:25] 2025-11-26 20:47:21,250 | INFO     | [monitor] control thread has ended
[2025-11-26 15:47:25] 2025-11-26 20:47:25,613 | INFO     | all workflow threads have been joined
[2025-11-26 15:47:25] 2025-11-26 20:47:25,613 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 15:47:25] 2025-11-26 20:47:25,614 | INFO     | traces error code: 0
[2025-11-26 15:47:25] 2025-11-26 20:47:25,614 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 15:47:25] 2025-11-26 20:47:25,727 [wrapper] ==== pilot stdout END ====
[2025-11-26 15:47:25] 2025-11-26 20:47:25,732 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 15:47:25] 2025-11-26 20:47:25,737 [wrapper] pilotpid: 3269
[2025-11-26 15:47:25] 2025-11-26 20:47:25,741 [wrapper] Pilot exit status: 0
[2025-11-26 15:47:25] 2025-11-26 20:47:25,758 [wrapper] pandaids: 6896924091
[2025-11-26 15:47:25] 2025-11-26 20:47:25,810 [wrapper] cleanup supervisor_pilot 24391 3270
[2025-11-26 15:47:25] 2025-11-26 20:47:25,815 [wrapper] Test setup, not cleaning
[2025-11-26 15:47:25] 2025-11-26 20:47:25,820 [wrapper] apfmon messages muted
[2025-11-26 15:47:25] 2025-11-26 20:47:25,825 [wrapper] ==== wrapper stdout END ====
[2025-11-26 15:47:25] 2025-11-26 20:47:25,830 [wrapper] ==== wrapper stderr END ====
[2025-11-26 15:47:25]  *** Error codes and diagnostics ***
[2025-11-26 15:47:25]     "exeErrorCode": 0,
[2025-11-26 15:47:25]     "exeErrorDiag": "",
[2025-11-26 15:47:25]     "pilotErrorCode": 0,
[2025-11-26 15:47:25]     "pilotErrorDiag": "",
[2025-11-26 15:47:25]  *** Listing of results directory ***
[2025-11-26 15:47:25] total 1311356
[2025-11-26 15:47:25] -rwx------ 1 boincer umatlas     36292 Nov 25 06:41 runpilot2-wrapper.sh
[2025-11-26 15:47:25] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 06:41 queuedata.json
[2025-11-26 15:47:25] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 06:41 pilot3.tar.gz
[2025-11-26 15:47:25] -rw-r--r-- 1 boincer umatlas       100 Nov 26 04:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 15:47:25] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 04:38 run_atlas
[2025-11-26 15:47:25] -rw-r--r-- 1 boincer umatlas       105 Nov 26 04:38 job.xml
[2025-11-26 15:47:25] -rw-r--r-- 2 boincer umatlas 407835986 Nov 26 04:38 EVNT.47483658._002151.pool.root.1
[2025-11-26 15:47:25] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 04:38 start_atlas.sh
[2025-11-26 15:47:25] drwxrwx--x 2 boincer umatlas      4096 Nov 26 04:38 shared
[2025-11-26 15:47:25] -rw-r--r-- 2 boincer umatlas    590098 Nov 26 04:38 input.tar.gz
[2025-11-26 15:47:25] -rw-r--r-- 1 boincer umatlas         0 Nov 26 04:38 boinc_lockfile
[2025-11-26 15:47:25] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 04:38 pandaJob.out
[2025-11-26 15:47:25] -rw------- 1 boincer umatlas        57 Nov 26 04:38 setup.sh.local
[2025-11-26 15:47:25] -rw------- 1 boincer umatlas    991827 Nov 26 04:39 agis_schedconf.cvmfs.json
[2025-11-26 15:47:25] drwx------ 5 boincer umatlas      4096 Nov 26 04:39 pilot3
[2025-11-26 15:47:25] -rw-r--r-- 1 boincer umatlas       533 Nov 26 15:32 boinc_task_state.xml
[2025-11-26 15:47:25] -rw-r--r-- 1 boincer umatlas      5912 Nov 26 15:37 init_data.xml
[2025-11-26 15:47:25] -rw------- 1 boincer umatlas 916218109 Nov 26 15:45 HITS.47556161._001345.pool.root.1
[2025-11-26 15:47:25] -rw------- 1 boincer umatlas        95 Nov 26 15:46 pilot_heartbeat.json
[2025-11-26 15:47:25] -rw------- 1 boincer umatlas      1060 Nov 26 15:46 memory_monitor_summary.json
[2025-11-26 15:47:25] -rw------- 1 boincer umatlas   1516240 Nov 26 15:46 agis_ddmendpoints.agis.ALL.json
[2025-11-26 15:47:25] -rw------- 1 boincer umatlas   1908094 Nov 26 15:46 log.47556161._001345.job.log.tgz.1
[2025-11-26 15:47:25] -rw------- 1 boincer umatlas      8668 Nov 26 15:46 heartbeat.json
[2025-11-26 15:47:25] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 15:47 boinc_mmap_file
[2025-11-26 15:47:25] -rw-r--r-- 1 boincer umatlas        29 Nov 26 15:47 wrapper_checkpoint.txt
[2025-11-26 15:47:25] -rw------- 1 boincer umatlas      4552 Nov 26 15:47 pilotlog.txt
[2025-11-26 15:47:25] -rw------- 1 boincer umatlas   5518172 Nov 26 15:47 log.47556161._001345.job.log.1
[2025-11-26 15:47:25] -rw------- 1 boincer umatlas       353 Nov 26 15:47 output.list
[2025-11-26 15:47:25] -rw-r--r-- 1 boincer umatlas       620 Nov 26 15:47 runtime_log
[2025-11-26 15:47:25] -rw------- 1 boincer umatlas   7444480 Nov 26 15:47 result.tar.gz
[2025-11-26 15:47:25] -rw-r--r-- 1 boincer umatlas      9338 Nov 26 15:47 runtime_log.err
[2025-11-26 15:47:25] -rw------- 1 boincer umatlas       667 Nov 26 15:47 CnYLDmRb6h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTSJKDmwd5TZn.diag
[2025-11-26 15:47:25] -rw-r--r-- 1 boincer umatlas     21226 Nov 26 15:47 stderr.txt
[2025-11-26 15:47:26] HITS file was successfully produced:
[2025-11-26 15:47:26] -rw------- 1 boincer umatlas 916218109 Nov 26 15:45 shared/HITS.pool.root.1
[2025-11-26 15:47:26]  *** Contents of shared directory: ***
[2025-11-26 15:47:26] total 1300900
[2025-11-26 15:47:26] -rw-r--r-- 2 boincer umatlas 407835986 Nov 26 04:38 ATLAS.root_0
[2025-11-26 15:47:26] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 04:38 start_atlas.sh
[2025-11-26 15:47:26] -rw-r--r-- 2 boincer umatlas    590098 Nov 26 04:38 input.tar.gz
[2025-11-26 15:47:26] -rw------- 1 boincer umatlas 916218109 Nov 26 15:45 HITS.pool.root.1
[2025-11-26 15:47:26] -rw------- 1 boincer umatlas   7444480 Nov 26 15:47 result.tar.gz
15:47:27 (31899): run_atlas exited; CPU time 307827.930429
15:47:27 (31899): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN