Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:24:25 (4595): wrapper (7.7.26015): starting
04:24:25 (4595): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 04:24:25] Arguments: --nthreads 8
[2025-11-26 04:24:25] Threads: 8
[2025-11-26 04:24:25] Checking for CVMFS
[2025-11-26 04:24:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 04:24:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 04:24:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 04:24:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 04:24:26] 2.11.2.0 8814 117478 128572 153316 2 81 11792692 18432000 1885 130560 0 84722917 99.973 5003274 31677 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 04:24:26] CVMFS is ok
[2025-11-26 04:24:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 04:24:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 04:24:26] Further information can be found at the LHC@home message board.
[2025-11-26 04:24:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 04:24:26] Checking for apptainer binary...
[2025-11-26 04:24:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 04:24:26] Running /usr/bin/apptainer --version
[2025-11-26 04:24:26] apptainer version 1.3.2-1.el7
[2025-11-26 04:24:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 04:24:27] c-206-19.aglt2.org
[2025-11-26 04:24:27] apptainer works
[2025-11-26 04:24:27] Set ATHENA_PROC_NUMBER=8
[2025-11-26 04:24:27] Set ATHENA_CORE_NUMBER=8
[2025-11-26 04:24:27] Starting ATLAS job with PandaID=6896296922
[2025-11-26 04:24:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:27:38]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:27:38] 2025-11-27 04:26:56,016 | INFO     | monitor loop #4886: job 0:6896296922 is in state 'finished'
[2025-11-26 23:27:38] 2025-11-27 04:26:56,016 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:27:38] 2025-11-27 04:26:56,946 | INFO     | time since job start (68538s) is within the limit (172800.0s)
[2025-11-26 23:27:38] 2025-11-27 04:26:57,402 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 23:27:38] 2025-11-27 04:26:57,406 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2211.6666666666665
[2025-11-26 23:27:38] 2025-11-27 04:26:57,409 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6896296922/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 23:27:38] 2025-11-27 04:26:57,410 | INFO     | extracted standard info from prmon json
[2025-11-26 23:27:38] 2025-11-27 04:26:57,410 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 23:27:38] 2025-11-27 04:26:57,410 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 23:27:38] 2025-11-27 04:26:57,426 | INFO     | fitting pss+swap vs Time
[2025-11-26 23:27:38] 2025-11-27 04:26:57,427 | INFO     | sum of square deviations: 439152974021.4206
[2025-11-26 23:27:38] 2025-11-27 04:26:57,452 | INFO     | sum of deviations: 2163382736327.5405
[2025-11-26 23:27:38] 2025-11-27 04:26:57,452 | INFO     | mean x: 1764183327.6242208
[2025-11-26 23:27:38] 2025-11-27 04:26:57,452 | INFO     | mean y: 2872866.7595725735
[2025-11-26 23:27:38] 2025-11-27 04:26:57,452 | INFO     | intersect: -8687956936.235111
[2025-11-26 23:27:38] 2025-11-27 04:26:57,453 | INFO     | chi2: 4.554227445661781
[2025-11-26 23:27:38] 2025-11-27 04:26:57,454 | INFO     | sum of square deviations: 433313441121.9642
[2025-11-26 23:27:38] 2025-11-27 04:26:57,479 | INFO     | sum of deviations: 2456190077912.34
[2025-11-26 23:27:38] 2025-11-27 04:26:57,479 | INFO     | mean x: 1764183175.1270125
[2025-11-26 23:27:38] 2025-11-27 04:26:57,479 | INFO     | mean y: 2880508.3497316637
[2025-11-26 23:27:38] 2025-11-27 04:26:57,479 | INFO     | intersect: -9997199801.06122
[2025-11-26 23:27:38] 2025-11-27 04:26:57,480 | INFO     | chi2: 2.4550275507929857
[2025-11-26 23:27:38] 2025-11-27 04:26:57,480 | INFO     | current chi2=2.4550275507929857 (change=46.09343560274816 %)
[2025-11-26 23:27:38] 2025-11-27 04:26:57,481 | INFO     | sum of square deviations: 427525909197.4943
[2025-11-26 23:27:38] 2025-11-27 04:26:57,506 | INFO     | sum of deviations: 2520425492370.02
[2025-11-26 23:27:38] 2025-11-27 04:26:57,506 | INFO     | mean x: 1764183022.6298294
[2025-11-26 23:27:38] 2025-11-27 04:26:57,506 | INFO     | mean y: 2882198.8787061996
[2025-11-26 23:27:38] 2025-11-27 04:26:57,506 | INFO     | intersect: -10397638021.729898
[2025-11-26 23:27:38] 2025-11-27 04:26:57,507 | INFO     | chi2: 2.2600860804028917
[2025-11-26 23:27:38] 2025-11-27 04:26:57,507 | INFO     | current chi2=2.2600860804028917 (change=7.940500314431379 %)
[2025-11-26 23:27:38] 2025-11-27 04:26:57,508 | INFO     | right removable region: 1112
[2025-11-26 23:27:38] 2025-11-27 04:26:57,509 | INFO     | sum of square deviations: 433313081771.2168
[2025-11-26 23:27:38] 2025-11-27 04:26:57,533 | INFO     | sum of deviations: 1872687052431.148
[2025-11-26 23:27:38] 2025-11-27 04:26:57,534 | INFO     | mean x: 1764183480.1261182
[2025-11-26 23:27:38] 2025-11-27 04:26:57,534 | INFO     | mean y: 2880449.1833631485
[2025-11-26 23:27:38] 2025-11-27 04:26:57,534 | INFO     | intersect: -7621545630.547702
[2025-11-26 23:27:38] 2025-11-27 04:26:57,535 | INFO     | chi2: 2.5335219105393247
[2025-11-26 23:27:38] 2025-11-27 04:26:57,535 | INFO     | current chi2=2.5335219105393247 (change=44.369886204241276 %)
[2025-11-26 23:27:38] 2025-11-27 04:26:57,536 | INFO     | sum of square deviations: 427525395090.76544
[2025-11-26 23:27:38] 2025-11-27 04:26:57,561 | INFO     | sum of deviations: 1798112503796.1123
[2025-11-26 23:27:38] 2025-11-27 04:26:57,561 | INFO     | mean x: 1764183632.625337
[2025-11-26 23:27:38] 2025-11-27 04:26:57,561 | INFO     | mean y: 2882413.705300988
[2025-11-26 23:27:38] 2025-11-27 04:26:57,561 | INFO     | intersect: -7417029210.825433
[2025-11-26 23:27:38] 2025-11-27 04:26:57,562 | INFO     | chi2: 2.480061214649902
[2025-11-26 23:27:38] 2025-11-27 04:26:57,562 | INFO     | current chi2=2.480061214649902 (change=2.1101335523102835 %)
[2025-11-26 23:27:38] 2025-11-27 04:26:57,562 | INFO     | left removable region: 20
[2025-11-26 23:27:38] 2025-11-27 04:26:57,564 | INFO     | sum of square deviations: 403779978154.2736
[2025-11-26 23:27:38] 2025-11-27 04:26:57,587 | INFO     | sum of deviations: 2057776922793.8
[2025-11-26 23:27:38] 2025-11-27 04:26:57,587 | INFO     | mean x: 1764183602.1309524
[2025-11-26 23:27:38] 2025-11-27 04:26:57,587 | INFO     | mean y: 2894685.358058608
[2025-11-26 23:27:38] 2025-11-27 04:26:57,587 | INFO     | intersect: -8987883709.922533
[2025-11-26 23:27:38] 2025-11-27 04:26:57,588 | INFO     | chi2: 0.1507329363397652
[2025-11-26 23:27:38] 2025-11-27 04:26:57,589 | INFO     | current memory leak: 5.10 B/s (using 1092 data points, chi2=0.15)
[2025-11-26 23:27:38] 2025-11-27 04:26:57,589 | INFO     | could have reported an average CPU frequency of 2622 MHz (41 samples)
[2025-11-26 23:27:38] 2025-11-27 04:26:57,590 | INFO     | ..............................
[2025-11-26 23:27:38] 2025-11-27 04:26:57,590 | INFO     | . Timing measurements:
[2025-11-26 23:27:38] 2025-11-27 04:26:57,590 | INFO     | . get job = 0 s
[2025-11-26 23:27:38] 2025-11-27 04:26:57,590 | INFO     | . initial setup = 2 s
[2025-11-26 23:27:38] 2025-11-27 04:26:57,590 | INFO     | . payload setup = 5 s
[2025-11-26 23:27:38] 2025-11-27 04:26:57,590 | INFO     | . stage-in = 0 s
[2025-11-26 23:27:38] 2025-11-27 04:26:57,590 | INFO     | . payload execution = 68506 s
[2025-11-26 23:27:38] 2025-11-27 04:26:57,590 | INFO     | . stage-out = 3 s
[2025-11-26 23:27:38] 2025-11-27 04:26:57,590 | INFO     | . log creation = 0 s
[2025-11-26 23:27:38] 2025-11-27 04:26:57,590 | INFO     | ..............................
[2025-11-26 23:27:38] 2025-11-27 04:26:57,672 | INFO     | 
[2025-11-26 23:27:38] 2025-11-27 04:26:57,672 | INFO     | job summary report
[2025-11-26 23:27:38] 2025-11-27 04:26:57,672 | INFO     | --------------------------------------------------
[2025-11-26 23:27:38] 2025-11-27 04:26:57,672 | INFO     | PanDA job id: 6896296922
[2025-11-26 23:27:38] 2025-11-27 04:26:57,672 | INFO     | task id: 47556161
[2025-11-26 23:27:38] 2025-11-27 04:26:57,672 | INFO     | errors: (none)
[2025-11-26 23:27:38] 2025-11-27 04:26:57,673 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 23:27:38] 2025-11-27 04:26:57,673 | INFO     | pilot state: finished 
[2025-11-26 23:27:38] 2025-11-27 04:26:57,673 | INFO     | transexitcode: 0
[2025-11-26 23:27:38] 2025-11-27 04:26:57,673 | INFO     | exeerrorcode: 0
[2025-11-26 23:27:38] 2025-11-27 04:26:57,673 | INFO     | exeerrordiag: 
[2025-11-26 23:27:38] 2025-11-27 04:26:57,673 | INFO     | exitcode: 0
[2025-11-26 23:27:38] 2025-11-27 04:26:57,673 | INFO     | exitmsg: OK
[2025-11-26 23:27:38] 2025-11-27 04:26:57,673 | INFO     | cpuconsumptiontime: 533104 s
[2025-11-26 23:27:38] 2025-11-27 04:26:57,673 | INFO     | nevents: 1000
[2025-11-26 23:27:38] 2025-11-27 04:26:57,673 | INFO     | neventsw: 0
[2025-11-26 23:27:38] 2025-11-27 04:26:57,674 | INFO     | pid: 14739
[2025-11-26 23:27:38] 2025-11-27 04:26:57,674 | INFO     | pgrp: 14739
[2025-11-26 23:27:38] 2025-11-27 04:26:57,674 | INFO     | corecount: 8
[2025-11-26 23:27:38] 2025-11-27 04:26:57,674 | INFO     | event service: False
[2025-11-26 23:27:38] 2025-11-27 04:26:57,674 | INFO     | sizes: {0: 2284199, 1: 2284341, 4: 2284603, 11: 2284631, 68515: 2340524, 68520: 2349702, 68524: 2349988}
[2025-11-26 23:27:38] 2025-11-27 04:26:57,674 | INFO     | --------------------------------------------------
[2025-11-26 23:27:38] 2025-11-27 04:26:57,674 | INFO     | 
[2025-11-26 23:27:38] 2025-11-27 04:26:57,674 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 23:27:38] 2025-11-27 04:26:57,689 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 23:27:38] 2025-11-27 04:26:57,689 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 23:27:38] 2025-11-27 04:26:57,689 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 23:27:38] 2025-11-27 04:26:57,689 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 23:27:38] 2025-11-27 04:26:57,689 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 23:27:38] 2025-11-27 04:26:57,689 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 23:27:38] 2025-11-27 04:26:57,690 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 23:27:38] 2025-11-27 04:26:57,690 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 23:27:38] 2025-11-27 04:26:57,690 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 23:27:38] 2025-11-27 04:26:57,690 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 23:27:38] 2025-11-27 04:26:57,690 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 23:27:38] 2025-11-27 04:26:57,690 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 23:27:38] 2025-11-27 04:26:57,690 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 23:27:38] 2025-11-27 04:26:57,690 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 23:27:38] 2025-11-27 04:26:57,690 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 23:27:38] 2025-11-27 04:26:57,691 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 23:27:38] 2025-11-27 04:26:57,691 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 23:27:38] 2025-11-27 04:26:57,691 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 23:27:38] 2025-11-27 04:26:57,691 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 23:27:38] 2025-11-27 04:26:57,691 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 23:27:38] 2025-11-27 04:26:57,691 | INFO     | job 6896296922 has completed (purged errors)
[2025-11-26 23:27:38] 2025-11-27 04:26:57,691 | INFO     | overall cleanup function is called
[2025-11-26 23:27:38] 2025-11-27 04:26:58,704 | INFO     | --- collectZombieJob: --- 10, [14739]
[2025-11-26 23:27:38] 2025-11-27 04:26:58,704 | INFO     | zombie collector waiting for pid 14739
[2025-11-26 23:27:38] 2025-11-27 04:26:58,704 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 23:27:38] 2025-11-27 04:26:58,704 | INFO     | collected zombie processes
[2025-11-26 23:27:38] 2025-11-27 04:26:58,704 | INFO     | will attempt to kill all subprocesses of pid=14739
[2025-11-26 23:27:38] 2025-11-27 04:26:58,840 | INFO     | process IDs to be killed: [14739] (in reverse order)
[2025-11-26 23:27:38] 2025-11-27 04:26:58,896 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 23:27:38] 2025-11-27 04:26:58,896 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 23:27:38] 2025-11-27 04:26:58,899 | INFO     | did not find any defunct processes belonging to 14739
[2025-11-26 23:27:38] 2025-11-27 04:26:58,901 | INFO     | did not find any defunct processes belonging to 14739
[2025-11-26 23:27:38] 2025-11-27 04:26:58,903 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 23:27:38] 2025-11-27 04:26:58,903 | INFO     | ready for new job
[2025-11-26 23:27:38] 2025-11-27 04:26:58,903 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 23:27:38] 2025-11-27 04:26:58,907 | INFO     | ***************************************
[2025-11-26 23:27:38] 2025-11-27 04:26:58,907 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 23:27:38] 2025-11-27 04:26:58,907 | INFO     | ***************************************
[2025-11-26 23:27:38] 2025-11-27 04:26:58,907 | INFO     | 
[2025-11-26 23:27:38] 2025-11-27 04:26:58,908 | INFO     | architecture information:
[2025-11-26 23:27:38] 2025-11-27 04:26:58,909 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:27:38] 2025-11-27 04:26:58,922 | INFO     | cat /etc/os-release:
[2025-11-26 23:27:38] NAME="CentOS Linux"
[2025-11-26 23:27:38] VERSION="7 (Core)"
[2025-11-26 23:27:38] ID="centos"
[2025-11-26 23:27:38] ID_LIKE="rhel fedora"
[2025-11-26 23:27:38] VERSION_ID="7"
[2025-11-26 23:27:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:27:38] ANSI_COLOR="0;31"
[2025-11-26 23:27:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:27:38] HOME_URL="https://www.centos.org/"
[2025-11-26 23:27:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:27:38] 
[2025-11-26 23:27:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:27:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:27:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:27:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:27:38] 
[2025-11-26 23:27:38] 2025-11-27 04:26:58,922 | INFO     | ***************************************
[2025-11-26 23:27:38] 2025-11-27 04:26:59,425 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 23:27:38] 2025-11-27 04:26:59,436 | INFO     | sufficient remaining disk space (24519901184 B)
[2025-11-26 23:27:38] 2025-11-27 04:26:59,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:27:38] 2025-11-27 04:26:59,437 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:27:38] 2025-11-27 04:26:59,437 | INFO     | update_server=False
[2025-11-26 23:27:38] 2025-11-27 04:26:59,437 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:27:38] 2025-11-27 04:26:59,437 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:27:38] 2025-11-27 04:26:59,437 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:27:38] 2025-11-27 04:26:59,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:27:38] 2025-11-27 04:26:59,524 | INFO     | aborting loop
[2025-11-26 23:27:38] 2025-11-27 04:26:59,597 | INFO     | all payload control threads have been joined
[2025-11-26 23:27:38] 2025-11-27 04:26:59,837 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:27:38] 2025-11-27 04:27:00,218 | INFO     | all data control threads have been joined
[2025-11-26 23:27:38] 2025-11-27 04:27:00,329 | INFO     | all job control threads have been joined
[2025-11-26 23:27:38] 2025-11-27 04:27:00,442 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:27:38] 2025-11-27 04:27:00,444 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:27:38] 2025-11-27 04:27:00,529 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:27:38] 2025-11-27 04:27:00,577 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:27:38] 2025-11-27 04:27:00,602 | INFO     | [payload] control thread has finished
[2025-11-26 23:27:38] 2025-11-27 04:27:01,156 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:27:38] 2025-11-27 04:27:01,223 | INFO     | [data] control thread has finished
[2025-11-26 23:27:38] 2025-11-27 04:27:01,260 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:27:38] 2025-11-27 04:27:01,270 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:27:38] 2025-11-27 04:27:01,334 | INFO     | [job] control thread has finished
[2025-11-26 23:27:38] 2025-11-27 04:27:01,374 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:27:38] 2025-11-27 04:27:01,440 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:27:38] 2025-11-27 04:27:01,849 | INFO     | [job] validate thread has finished
[2025-11-26 23:27:38] 2025-11-27 04:27:01,866 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:27:38] 2025-11-27 04:27:01,918 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:27:38] 2025-11-27 04:27:03,843 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:27:38] 2025-11-27 04:27:30,193 | INFO     | PID=8313 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-26 23:27:38] 2025-11-27 04:27:30,193 | INFO     | .. there are 3 such processes running
[2025-11-26 23:27:38] 2025-11-27 04:27:30,193 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:27:38] 2025-11-27 04:27:30,194 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:27:38] 2025-11-27 04:27:30,194 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:27:38] 2025-11-27 04:27:31,962 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:27:38] 2025-11-27 04:27:32,838 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140020085241664)>', '<ExcThread(monitor, started 140019423508224)>']
[2025-11-26 23:27:38] 2025-11-27 04:27:33,210 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:27:38] 2025-11-27 04:27:33,210 | INFO     | [monitor] control thread has ended
[2025-11-26 23:27:38] 2025-11-27 04:27:37,846 | INFO     | all workflow threads have been joined
[2025-11-26 23:27:38] 2025-11-27 04:27:37,846 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:27:38] 2025-11-27 04:27:37,846 | INFO     | traces error code: 0
[2025-11-26 23:27:38] 2025-11-27 04:27:37,846 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:27:38] 2025-11-27 04:27:37,942 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:27:38] 2025-11-27 04:27:37,944 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:27:38] 2025-11-27 04:27:37,947 [wrapper] pilotpid: 8313
[2025-11-26 23:27:38] 2025-11-27 04:27:37,949 [wrapper] Pilot exit status: 0
[2025-11-26 23:27:38] 2025-11-27 04:27:37,959 [wrapper] pandaids: 6896296922
[2025-11-26 23:27:38] 2025-11-27 04:27:37,988 [wrapper] cleanup supervisor_pilot 30980 8314
[2025-11-26 23:27:38] 2025-11-27 04:27:37,990 [wrapper] Test setup, not cleaning
[2025-11-26 23:27:38] 2025-11-27 04:27:37,993 [wrapper] apfmon messages muted
[2025-11-26 23:27:38] 2025-11-27 04:27:37,995 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:27:38] 2025-11-27 04:27:37,998 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:27:38]  *** Error codes and diagnostics ***
[2025-11-26 23:27:38]     "exeErrorCode": 0,
[2025-11-26 23:27:38]     "exeErrorDiag": "",
[2025-11-26 23:27:38]     "pilotErrorCode": 0,
[2025-11-26 23:27:38]     "pilotErrorDiag": "",
[2025-11-26 23:27:38]  *** Listing of results directory ***
[2025-11-26 23:27:38] total 1316540
[2025-11-26 23:27:38] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 19:10 pilot3.tar.gz
[2025-11-26 23:27:38] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 19:41 queuedata.json
[2025-11-26 23:27:38] -rwx------ 1 boincer umatlas     36292 Nov 24 19:41 runpilot2-wrapper.sh
[2025-11-26 23:27:38] -rw-r--r-- 1 boincer umatlas       100 Nov 26 04:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:27:38] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 04:24 run_atlas
[2025-11-26 23:27:38] -rw-r--r-- 1 boincer umatlas       105 Nov 26 04:24 job.xml
[2025-11-26 23:27:38] -rw-r--r-- 2 boincer umatlas 409090692 Nov 26 04:24 EVNT.47483658._002071.pool.root.1
[2025-11-26 23:27:38] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 04:24 start_atlas.sh
[2025-11-26 23:27:38] drwxrwx--x 2 boincer umatlas      4096 Nov 26 04:24 shared
[2025-11-26 23:27:38] -rw-r--r-- 2 boincer umatlas    590097 Nov 26 04:24 input.tar.gz
[2025-11-26 23:27:38] -rw-r--r-- 1 boincer umatlas         0 Nov 26 04:24 boinc_lockfile
[2025-11-26 23:27:38] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 04:24 pandaJob.out
[2025-11-26 23:27:38] -rw------- 1 boincer umatlas        57 Nov 26 04:24 setup.sh.local
[2025-11-26 23:27:38] -rw------- 1 boincer umatlas    991827 Nov 26 04:24 agis_schedconf.cvmfs.json
[2025-11-26 23:27:38] drwx------ 5 boincer umatlas      4096 Nov 26 04:24 pilot3
[2025-11-26 23:27:38] -rw-r--r-- 1 boincer umatlas       532 Nov 26 23:15 boinc_task_state.xml
[2025-11-26 23:27:38] -rw-r--r-- 1 boincer umatlas      5954 Nov 26 23:22 init_data.xml
[2025-11-26 23:27:38] -rw------- 1 boincer umatlas 911585952 Nov 26 23:26 HITS.47556161._000545.pool.root.1
[2025-11-26 23:27:38] -rw------- 1 boincer umatlas      1066 Nov 26 23:26 memory_monitor_summary.json
[2025-11-26 23:27:38] -rw------- 1 boincer umatlas   1516240 Nov 26 23:26 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:27:38] -rw------- 1 boincer umatlas   2298223 Nov 26 23:26 log.47556161._000545.job.log.tgz.1
[2025-11-26 23:27:38] -rw------- 1 boincer umatlas      8664 Nov 26 23:26 heartbeat.json
[2025-11-26 23:27:38] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 23:27 boinc_mmap_file
[2025-11-26 23:27:38] -rw-r--r-- 1 boincer umatlas        29 Nov 26 23:27 wrapper_checkpoint.txt
[2025-11-26 23:27:38] -rw------- 1 boincer umatlas        95 Nov 26 23:27 pilot_heartbeat.json
[2025-11-26 23:27:38] -rw------- 1 boincer umatlas      4820 Nov 26 23:27 pilotlog.txt
[2025-11-26 23:27:38] -rw------- 1 boincer umatlas   9470381 Nov 26 23:27 log.47556161._000545.job.log.1
[2025-11-26 23:27:38] -rw------- 1 boincer umatlas       353 Nov 26 23:27 output.list
[2025-11-26 23:27:38] -rw-r--r-- 1 boincer umatlas       620 Nov 26 23:27 runtime_log
[2025-11-26 23:27:38] -rw------- 1 boincer umatlas  11786240 Nov 26 23:27 result.tar.gz
[2025-11-26 23:27:38] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 23:27 runtime_log.err
[2025-11-26 23:27:38] -rw------- 1 boincer umatlas       668 Nov 26 23:27 jTLNDmQIwh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmE1LKDmETJ7Go.diag
[2025-11-26 23:27:38] -rw-r--r-- 1 boincer umatlas     21285 Nov 26 23:27 stderr.txt
[2025-11-26 23:27:38] HITS file was successfully produced:
[2025-11-26 23:27:38] -rw------- 1 boincer umatlas 911585952 Nov 26 23:26 shared/HITS.pool.root.1
[2025-11-26 23:27:38]  *** Contents of shared directory: ***
[2025-11-26 23:27:38] total 1301840
[2025-11-26 23:27:38] -rw-r--r-- 2 boincer umatlas 409090692 Nov 26 04:24 ATLAS.root_0
[2025-11-26 23:27:38] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 04:24 start_atlas.sh
[2025-11-26 23:27:38] -rw-r--r-- 2 boincer umatlas    590097 Nov 26 04:24 input.tar.gz
[2025-11-26 23:27:38] -rw------- 1 boincer umatlas 911585952 Nov 26 23:26 HITS.pool.root.1
[2025-11-26 23:27:38] -rw------- 1 boincer umatlas  11786240 Nov 26 23:27 result.tar.gz
23:27:39 (4595): run_atlas exited; CPU time 532295.298169
23:27:39 (4595): called boinc_finish(0)

</stderr_txt>
]]>

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