Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:05:57 (13710): wrapper (7.7.26015): starting
04:05:57 (13710): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 04:05:57] Arguments: --nthreads 8
[2025-11-26 04:05:57] Threads: 8
[2025-11-26 04:05:57] Checking for CVMFS
[2025-11-26 04:05:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 04:05:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 04:05:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 04:05:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 04:05:57] 2.11.2.0 2827 42876 82488 153315 3 81 18827117 20275200 1 130560 0 5567575 99.567 2916110 30053 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 04:05:57] CVMFS is ok
[2025-11-26 04:05:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 04:05:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 04:05:57] Further information can be found at the LHC@home message board.
[2025-11-26 04:05:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 04:05:57] Checking for apptainer binary...
[2025-11-26 04:05:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 04:05:57] Running /usr/bin/apptainer --version
[2025-11-26 04:05:58] apptainer version 1.3.2-1.el7
[2025-11-26 04:05:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 04:05:59] c-204-30.aglt2.org
[2025-11-26 04:05:59] apptainer works
[2025-11-26 04:05:59] Set ATHENA_PROC_NUMBER=8
[2025-11-26 04:05:59] Set ATHENA_CORE_NUMBER=8
[2025-11-26 04:05:59] Starting ATLAS job with PandaID=6896988841
[2025-11-26 04:05:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 16:39:43]  *** The last 200 lines of the pilot log: ***
[2025-11-26 16:39:43] 2025-11-26 21:39:07,714 | INFO     | time since job start (45170s) is within the limit (172800.0s)
[2025-11-26 16:39:43] 2025-11-26 21:39:08,610 | INFO     | monitor loop #3313: job 0:6896988841 is in state 'finished'
[2025-11-26 16:39:43] 2025-11-26 21:39:08,610 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:39:43] 2025-11-26 21:39:09,720 | INFO     | time since job start (45172s) is within the limit (172800.0s)
[2025-11-26 16:39:43] 2025-11-26 21:39:10,639 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 16:39:43] 2025-11-26 21:39:10,644 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1795.625
[2025-11-26 16:39:43] 2025-11-26 21:39:10,646 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896988841/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 16:39:43] 2025-11-26 21:39:10,647 | INFO     | extracted standard info from prmon json
[2025-11-26 16:39:43] 2025-11-26 21:39:10,648 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 16:39:43] 2025-11-26 21:39:10,648 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 16:39:43] 2025-11-26 21:39:10,661 | INFO     | fitting pss+swap vs Time
[2025-11-26 16:39:43] 2025-11-26 21:39:10,662 | INFO     | sum of square deviations: 125653225317.73528
[2025-11-26 16:39:43] 2025-11-26 21:39:10,673 | INFO     | sum of deviations: 868529795461.8462
[2025-11-26 16:39:43] 2025-11-26 21:39:10,674 | INFO     | mean x: 1764170550.181081
[2025-11-26 16:39:43] 2025-11-26 21:39:10,674 | INFO     | mean y: 3272273.3891891893
[2025-11-26 16:39:43] 2025-11-26 21:39:10,674 | INFO     | intersect: -12190880986.378513
[2025-11-26 16:39:43] 2025-11-26 21:39:10,675 | INFO     | chi2: 5.83930821521734
[2025-11-26 16:39:43] 2025-11-26 21:39:10,676 | INFO     | sum of square deviations: 123123526950.39998
[2025-11-26 16:39:43] 2025-11-26 21:39:10,687 | INFO     | sum of deviations: 1134455592123.915
[2025-11-26 16:39:43] 2025-11-26 21:39:10,687 | INFO     | mean x: 1764170397.6857142
[2025-11-26 16:39:43] 2025-11-26 21:39:10,687 | INFO     | mean y: 3288298.410884354
[2025-11-26 16:39:43] 2025-11-26 21:39:10,687 | INFO     | intersect: -16251712047.057434
[2025-11-26 16:39:43] 2025-11-26 21:39:10,688 | INFO     | chi2: 3.0045867649232174
[2025-11-26 16:39:43] 2025-11-26 21:39:10,688 | INFO     | current chi2=3.0045867649232174 (change=48.5455013815984 %)
[2025-11-26 16:39:43] 2025-11-26 21:39:10,689 | INFO     | sum of square deviations: 120628015270.53279
[2025-11-26 16:39:43] 2025-11-26 21:39:10,701 | INFO     | sum of deviations: 1211460380217.64
[2025-11-26 16:39:43] 2025-11-26 21:39:10,701 | INFO     | mean x: 1764170245.1904109
[2025-11-26 16:39:43] 2025-11-26 21:39:10,701 | INFO     | mean y: 3292995.4342465755
[2025-11-26 16:39:43] 2025-11-26 21:39:10,701 | INFO     | intersect: -17714169662.09077
[2025-11-26 16:39:43] 2025-11-26 21:39:10,702 | INFO     | chi2: 2.6327775715417934
[2025-11-26 16:39:43] 2025-11-26 21:39:10,702 | INFO     | current chi2=2.6327775715417934 (change=12.374719802472594 %)
[2025-11-26 16:39:43] 2025-11-26 21:39:10,702 | INFO     | right removable region: 729
[2025-11-26 16:39:43] 2025-11-26 21:39:10,703 | INFO     | sum of square deviations: 123123219510.39989
[2025-11-26 16:39:43] 2025-11-26 21:39:10,715 | INFO     | sum of deviations: 630417275239.1719
[2025-11-26 16:39:43] 2025-11-26 21:39:10,715 | INFO     | mean x: 1764170702.6857142
[2025-11-26 16:39:43] 2025-11-26 21:39:10,715 | INFO     | mean y: 3286602.22585034
[2025-11-26 16:39:43] 2025-11-26 21:39:10,715 | INFO     | intersect: -9029645543.850477
[2025-11-26 16:39:43] 2025-11-26 21:39:10,716 | INFO     | chi2: 3.4023417856451945
[2025-11-26 16:39:43] 2025-11-26 21:39:10,716 | INFO     | current chi2=3.4023417856451945 (change=41.73382085263744 %)
[2025-11-26 16:39:43] 2025-11-26 21:39:10,717 | INFO     | sum of square deviations: 120627489939.28912
[2025-11-26 16:39:43] 2025-11-26 21:39:10,729 | INFO     | sum of deviations: 584203541077.5233
[2025-11-26 16:39:43] 2025-11-26 21:39:10,729 | INFO     | mean x: 1764170855.1876712
[2025-11-26 16:39:43] 2025-11-26 21:39:10,729 | INFO     | mean y: 3289424.8136986303
[2025-11-26 16:39:43] 2025-11-26 21:39:10,729 | INFO     | intersect: -8540657408.409064
[2025-11-26 16:39:43] 2025-11-26 21:39:10,730 | INFO     | chi2: 3.363907328098175
[2025-11-26 16:39:43] 2025-11-26 21:39:10,730 | INFO     | current chi2=3.363907328098175 (change=1.129647165642738 %)
[2025-11-26 16:39:43] 2025-11-26 21:39:10,730 | INFO     | left removable region: 20
[2025-11-26 16:39:43] 2025-11-26 21:39:10,731 | INFO     | sum of square deviations: 110514146913.80232
[2025-11-26 16:39:43] 2025-11-26 21:39:10,742 | INFO     | sum of deviations: 848593168215.6537
[2025-11-26 16:39:43] 2025-11-26 21:39:10,742 | INFO     | mean x: 1764170824.696756
[2025-11-26 16:39:43] 2025-11-26 21:39:10,742 | INFO     | mean y: 3315974.1100141043
[2025-11-26 16:39:43] 2025-11-26 21:39:10,742 | INFO     | intersect: -13543033983.879585
[2025-11-26 16:39:43] 2025-11-26 21:39:10,743 | INFO     | chi2: 0.08611640327776476
[2025-11-26 16:39:43] 2025-11-26 21:39:10,744 | INFO     | current memory leak: 7.68 B/s (using 709 data points, chi2=0.09)
[2025-11-26 16:39:43] 2025-11-26 21:39:10,744 | INFO     | could have reported an average CPU frequency of 2184 MHz (28 samples)
[2025-11-26 16:39:43] 2025-11-26 21:39:10,744 | INFO     | ..............................
[2025-11-26 16:39:43] 2025-11-26 21:39:10,745 | INFO     | . Timing measurements:
[2025-11-26 16:39:43] 2025-11-26 21:39:10,745 | INFO     | . get job = 0 s
[2025-11-26 16:39:43] 2025-11-26 21:39:10,745 | INFO     | . initial setup = 2 s
[2025-11-26 16:39:43] 2025-11-26 21:39:10,745 | INFO     | . payload setup = 9 s
[2025-11-26 16:39:43] 2025-11-26 21:39:10,745 | INFO     | . stage-in = 0 s
[2025-11-26 16:39:43] 2025-11-26 21:39:10,745 | INFO     | . payload execution = 45131 s
[2025-11-26 16:39:43] 2025-11-26 21:39:10,745 | INFO     | . stage-out = 3 s
[2025-11-26 16:39:43] 2025-11-26 21:39:10,745 | INFO     | . log creation = 0 s
[2025-11-26 16:39:43] 2025-11-26 21:39:10,745 | INFO     | ..............................
[2025-11-26 16:39:43] 2025-11-26 21:39:11,163 | INFO     | 
[2025-11-26 16:39:43] 2025-11-26 21:39:11,164 | INFO     | job summary report
[2025-11-26 16:39:43] 2025-11-26 21:39:11,164 | INFO     | --------------------------------------------------
[2025-11-26 16:39:43] 2025-11-26 21:39:11,164 | INFO     | PanDA job id: 6896988841
[2025-11-26 16:39:43] 2025-11-26 21:39:11,164 | INFO     | task id: 47556161
[2025-11-26 16:39:43] 2025-11-26 21:39:11,165 | INFO     | errors: (none)
[2025-11-26 16:39:43] 2025-11-26 21:39:11,165 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 16:39:43] 2025-11-26 21:39:11,165 | INFO     | pilot state: finished 
[2025-11-26 16:39:43] 2025-11-26 21:39:11,165 | INFO     | transexitcode: 0
[2025-11-26 16:39:43] 2025-11-26 21:39:11,165 | INFO     | exeerrorcode: 0
[2025-11-26 16:39:43] 2025-11-26 21:39:11,166 | INFO     | exeerrordiag: 
[2025-11-26 16:39:43] 2025-11-26 21:39:11,166 | INFO     | exitcode: 0
[2025-11-26 16:39:43] 2025-11-26 21:39:11,166 | INFO     | exitmsg: OK
[2025-11-26 16:39:43] 2025-11-26 21:39:11,166 | INFO     | cpuconsumptiontime: 350653 s
[2025-11-26 16:39:43] 2025-11-26 21:39:11,167 | INFO     | nevents: 1000
[2025-11-26 16:39:43] 2025-11-26 21:39:11,167 | INFO     | neventsw: 0
[2025-11-26 16:39:43] 2025-11-26 21:39:11,167 | INFO     | pid: 23812
[2025-11-26 16:39:43] 2025-11-26 21:39:11,167 | INFO     | pgrp: 23812
[2025-11-26 16:39:43] 2025-11-26 21:39:11,167 | INFO     | corecount: 8
[2025-11-26 16:39:43] 2025-11-26 21:39:11,168 | INFO     | event service: False
[2025-11-26 16:39:43] 2025-11-26 21:39:11,168 | INFO     | sizes: {0: 2284099, 1: 2284241, 6: 2284503, 11: 2284531, 45144: 2330486, 45145: 2330485, 45148: 2339663, 45150: 2339719, 45156: 2339965}
[2025-11-26 16:39:43] 2025-11-26 21:39:11,168 | INFO     | --------------------------------------------------
[2025-11-26 16:39:43] 2025-11-26 21:39:11,168 | INFO     | 
[2025-11-26 16:39:43] 2025-11-26 21:39:11,169 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 16:39:43] 2025-11-26 21:39:11,199 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 16:39:43] 2025-11-26 21:39:11,200 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 16:39:43] 2025-11-26 21:39:11,200 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 16:39:43] 2025-11-26 21:39:11,201 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 16:39:43] 2025-11-26 21:39:11,201 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 16:39:43] 2025-11-26 21:39:11,201 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 16:39:43] 2025-11-26 21:39:11,201 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 16:39:43] 2025-11-26 21:39:11,202 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 16:39:43] 2025-11-26 21:39:11,202 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 16:39:43] 2025-11-26 21:39:11,202 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 16:39:43] 2025-11-26 21:39:11,203 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 16:39:43] 2025-11-26 21:39:11,203 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 16:39:43] 2025-11-26 21:39:11,203 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 16:39:43] 2025-11-26 21:39:11,203 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 16:39:43] 2025-11-26 21:39:11,204 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 16:39:43] 2025-11-26 21:39:11,204 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 16:39:43] 2025-11-26 21:39:11,204 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 16:39:43] 2025-11-26 21:39:11,204 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 16:39:43] 2025-11-26 21:39:11,205 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 16:39:43] 2025-11-26 21:39:11,205 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 16:39:43] 2025-11-26 21:39:11,205 | INFO     | job 6896988841 has completed (purged errors)
[2025-11-26 16:39:43] 2025-11-26 21:39:11,205 | INFO     | overall cleanup function is called
[2025-11-26 16:39:43] 2025-11-26 21:39:12,223 | INFO     | --- collectZombieJob: --- 10, [23812]
[2025-11-26 16:39:43] 2025-11-26 21:39:12,223 | INFO     | zombie collector waiting for pid 23812
[2025-11-26 16:39:43] 2025-11-26 21:39:12,223 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 16:39:43] 2025-11-26 21:39:12,223 | INFO     | collected zombie processes
[2025-11-26 16:39:43] 2025-11-26 21:39:12,224 | INFO     | will attempt to kill all subprocesses of pid=23812
[2025-11-26 16:39:43] 2025-11-26 21:39:12,325 | INFO     | process IDs to be killed: [23812] (in reverse order)
[2025-11-26 16:39:43] 2025-11-26 21:39:12,395 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 16:39:43] 2025-11-26 21:39:12,396 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 16:39:43] 2025-11-26 21:39:12,400 | INFO     | did not find any defunct processes belonging to 23812
[2025-11-26 16:39:43] 2025-11-26 21:39:12,403 | INFO     | did not find any defunct processes belonging to 23812
[2025-11-26 16:39:43] 2025-11-26 21:39:12,406 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 16:39:43] 2025-11-26 21:39:12,406 | INFO     | ready for new job
[2025-11-26 16:39:43] 2025-11-26 21:39:12,407 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 16:39:43] 2025-11-26 21:39:12,411 | INFO     | ***************************************
[2025-11-26 16:39:43] 2025-11-26 21:39:12,411 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 16:39:43] 2025-11-26 21:39:12,411 | INFO     | ***************************************
[2025-11-26 16:39:43] 2025-11-26 21:39:12,411 | INFO     | 
[2025-11-26 16:39:43] 2025-11-26 21:39:12,412 | INFO     | architecture information:
[2025-11-26 16:39:43] 2025-11-26 21:39:12,413 | INFO     | executing command: cat /etc/os-release
[2025-11-26 16:39:43] 2025-11-26 21:39:12,431 | INFO     | cat /etc/os-release:
[2025-11-26 16:39:43] NAME="CentOS Linux"
[2025-11-26 16:39:43] VERSION="7 (Core)"
[2025-11-26 16:39:43] ID="centos"
[2025-11-26 16:39:43] ID_LIKE="rhel fedora"
[2025-11-26 16:39:43] VERSION_ID="7"
[2025-11-26 16:39:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 16:39:43] ANSI_COLOR="0;31"
[2025-11-26 16:39:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 16:39:43] HOME_URL="https://www.centos.org/"
[2025-11-26 16:39:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 16:39:43] 
[2025-11-26 16:39:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 16:39:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 16:39:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 16:39:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 16:39:43] 
[2025-11-26 16:39:43] 2025-11-26 21:39:12,432 | INFO     | ***************************************
[2025-11-26 16:39:43] 2025-11-26 21:39:12,935 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 16:39:43] 2025-11-26 21:39:12,957 | INFO     | sufficient remaining disk space (17414750208 B)
[2025-11-26 16:39:43] 2025-11-26 21:39:12,957 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 16:39:43] 2025-11-26 21:39:12,958 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 16:39:43] 2025-11-26 21:39:12,958 | INFO     | update_server=False
[2025-11-26 16:39:43] 2025-11-26 21:39:12,958 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 16:39:43] 2025-11-26 21:39:12,959 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:39:43] 2025-11-26 21:39:12,959 | INFO     | aborting loop
[2025-11-26 16:39:43] 2025-11-26 21:39:13,653 | INFO     | all data control threads have been joined
[2025-11-26 16:39:43] 2025-11-26 21:39:13,907 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 16:39:43] 2025-11-26 21:39:13,964 | INFO     | [job] retrieve thread has finished
[2025-11-26 16:39:43] 2025-11-26 21:39:13,964 | INFO     | [job] job monitor thread has finished
[2025-11-26 16:39:43] 2025-11-26 21:39:14,268 | INFO     | [job] validate thread has finished
[2025-11-26 16:39:43] 2025-11-26 21:39:14,315 | INFO     | all payload control threads have been joined
[2025-11-26 16:39:43] 2025-11-26 21:39:14,316 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 16:39:43] 2025-11-26 21:39:14,626 | INFO     | all job control threads have been joined
[2025-11-26 16:39:43] 2025-11-26 21:39:14,655 | INFO     | [data] control thread has finished
[2025-11-26 16:39:43] 2025-11-26 21:39:14,924 | INFO     | [payload] validate_post thread has finished
[2025-11-26 16:39:43] 2025-11-26 21:39:14,949 | INFO     | [payload] failed_post thread has finished
[2025-11-26 16:39:43] 2025-11-26 21:39:14,977 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 16:39:43] 2025-11-26 21:39:15,091 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 16:39:43] 2025-11-26 21:39:15,321 | INFO     | [payload] control thread has finished
[2025-11-26 16:39:43] 2025-11-26 21:39:15,378 | INFO     | [data] copytool_in thread has finished
[2025-11-26 16:39:43] 2025-11-26 21:39:15,405 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 16:39:43] 2025-11-26 21:39:15,441 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 16:39:43] 2025-11-26 21:39:15,632 | INFO     | [job] control thread has finished
[2025-11-26 16:39:43] 2025-11-26 21:39:15,847 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:39:43] 2025-11-26 21:39:15,913 | INFO     | [data] copytool_out thread has finished
[2025-11-26 16:39:43] 2025-11-26 21:39:16,849 | INFO     | [job] queue monitor thread has finished
[2025-11-26 16:39:43] 2025-11-26 21:39:19,411 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 16:39:43] 2025-11-26 21:39:32,051 | INFO     | [monitor] cgroup control has ended
[2025-11-26 16:39:43] 2025-11-26 21:39:33,056 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140625386153792)>', '<ExcThread(monitor, started 140624653174528)>']
[2025-11-26 16:39:43] 2025-11-26 21:39:38,067 | INFO     | all workflow threads have been joined
[2025-11-26 16:39:43] 2025-11-26 21:39:38,068 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 16:39:43] 2025-11-26 21:39:38,068 | INFO     | traces error code: 0
[2025-11-26 16:39:43] 2025-11-26 21:39:38,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 16:39:43] 2025-11-26 21:39:42,949 | INFO     | PID=17448 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 16:39:43] 2025-11-26 21:39:42,950 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 16:39:43] 2025-11-26 21:39:42,950 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 16:39:43] 2025-11-26 21:39:42,950 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 16:39:43] 2025-11-26 21:39:42,950 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 16:39:43] 2025-11-26 21:39:42,950 | INFO     | [monitor] control thread has ended
[2025-11-26 16:39:43] 2025-11-26 21:39:43,074 [wrapper] ==== pilot stdout END ====
[2025-11-26 16:39:43] 2025-11-26 21:39:43,078 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 16:39:43] 2025-11-26 21:39:43,083 [wrapper] pilotpid: 17448
[2025-11-26 16:39:43] 2025-11-26 21:39:43,088 [wrapper] Pilot exit status: 0
[2025-11-26 16:39:43] 2025-11-26 21:39:43,104 [wrapper] pandaids: 6896988841
[2025-11-26 16:39:43] 2025-11-26 21:39:43,148 [wrapper] cleanup supervisor_pilot  6645 17449
[2025-11-26 16:39:43] 2025-11-26 21:39:43,154 [wrapper] Test setup, not cleaning
[2025-11-26 16:39:43] 2025-11-26 21:39:43,159 [wrapper] apfmon messages muted
[2025-11-26 16:39:43] 2025-11-26 21:39:43,164 [wrapper] ==== wrapper stdout END ====
[2025-11-26 16:39:43] 2025-11-26 21:39:43,169 [wrapper] ==== wrapper stderr END ====
[2025-11-26 16:39:43]  *** Error codes and diagnostics ***
[2025-11-26 16:39:43]     "exeErrorCode": 0,
[2025-11-26 16:39:43]     "exeErrorDiag": "",
[2025-11-26 16:39:43]     "pilotErrorCode": 0,
[2025-11-26 16:39:43]     "pilotErrorDiag": "",
[2025-11-26 16:39:43]  *** Listing of results directory ***
[2025-11-26 16:39:43] total 1333848
[2025-11-26 16:39:43] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 06:49 pilot3.tar.gz
[2025-11-26 16:39:43] -rwx------ 1 boincer umatlas     36292 Nov 25 06:57 runpilot2-wrapper.sh
[2025-11-26 16:39:43] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 06:57 queuedata.json
[2025-11-26 16:39:43] -rw-r--r-- 1 boincer umatlas       100 Nov 26 04:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 16:39:43] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 04:05 run_atlas
[2025-11-26 16:39:43] -rw-r--r-- 1 boincer umatlas       105 Nov 26 04:05 job.xml
[2025-11-26 16:39:43] -rw-r--r-- 2 boincer umatlas 409892574 Nov 26 04:05 EVNT.47483658._002156.pool.root.1
[2025-11-26 16:39:43] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 04:05 start_atlas.sh
[2025-11-26 16:39:43] drwxrwx--x 2 boincer umatlas      4096 Nov 26 04:05 shared
[2025-11-26 16:39:43] -rw-r--r-- 2 boincer umatlas    590102 Nov 26 04:05 input.tar.gz
[2025-11-26 16:39:43] -rw-r--r-- 1 boincer umatlas         0 Nov 26 04:05 boinc_lockfile
[2025-11-26 16:39:43] -rw-r--r-- 1 boincer umatlas      2784 Nov 26 04:05 pandaJob.out
[2025-11-26 16:39:43] -rw------- 1 boincer umatlas        57 Nov 26 04:06 setup.sh.local
[2025-11-26 16:39:43] -rw------- 1 boincer umatlas    991877 Nov 26 04:06 agis_schedconf.cvmfs.json
[2025-11-26 16:39:43] drwx------ 5 boincer umatlas      4096 Nov 26 04:06 pilot3
[2025-11-26 16:39:43] -rw-r--r-- 1 boincer umatlas       532 Nov 26 16:28 boinc_task_state.xml
[2025-11-26 16:39:43] -rw-r--r-- 1 boincer umatlas      5913 Nov 26 16:30 init_data.xml
[2025-11-26 16:39:43] -rw------- 1 boincer umatlas 935647477 Nov 26 16:38 HITS.47556161._001395.pool.root.1
[2025-11-26 16:39:43] -rw------- 1 boincer umatlas        95 Nov 26 16:38 pilot_heartbeat.json
[2025-11-26 16:39:43] -rw------- 1 boincer umatlas      1061 Nov 26 16:38 memory_monitor_summary.json
[2025-11-26 16:39:43] -rw------- 1 boincer umatlas   1516240 Nov 26 16:39 agis_ddmendpoints.agis.ALL.json
[2025-11-26 16:39:43] -rw------- 1 boincer umatlas   1985347 Nov 26 16:39 log.47556161._001395.job.log.tgz.1
[2025-11-26 16:39:43] -rw------- 1 boincer umatlas      8660 Nov 26 16:39 heartbeat.json
[2025-11-26 16:39:43] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 16:39 boinc_mmap_file
[2025-11-26 16:39:43] -rw-r--r-- 1 boincer umatlas        29 Nov 26 16:39 wrapper_checkpoint.txt
[2025-11-26 16:39:43] -rw------- 1 boincer umatlas       745 Nov 26 16:39 pilotlog.txt
[2025-11-26 16:39:43] -rw------- 1 boincer umatlas   6217180 Nov 26 16:39 log.47556161._001395.job.log.1
[2025-11-26 16:39:43] -rw------- 1 boincer umatlas       353 Nov 26 16:39 output.list
[2025-11-26 16:39:43] -rw-r--r-- 1 boincer umatlas       620 Nov 26 16:39 runtime_log
[2025-11-26 16:39:43] -rw------- 1 boincer umatlas   8222720 Nov 26 16:39 result.tar.gz
[2025-11-26 16:39:43] -rw------- 1 boincer umatlas       668 Nov 26 16:39 XKCMDmUq6h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfSJKDm0ZnC6n.diag
[2025-11-26 16:39:43] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 16:39 runtime_log.err
[2025-11-26 16:39:43] -rw-r--r-- 1 boincer umatlas     21329 Nov 26 16:39 stderr.txt
[2025-11-26 16:39:43] HITS file was successfully produced:
[2025-11-26 16:39:43] -rw------- 1 boincer umatlas 935647477 Nov 26 16:38 shared/HITS.pool.root.1
[2025-11-26 16:39:43]  *** Contents of shared directory: ***
[2025-11-26 16:39:43] total 1322640
[2025-11-26 16:39:43] -rw-r--r-- 2 boincer umatlas 409892574 Nov 26 04:05 ATLAS.root_0
[2025-11-26 16:39:43] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 04:05 start_atlas.sh
[2025-11-26 16:39:43] -rw-r--r-- 2 boincer umatlas    590102 Nov 26 04:05 input.tar.gz
[2025-11-26 16:39:43] -rw------- 1 boincer umatlas 935647477 Nov 26 16:38 HITS.pool.root.1
[2025-11-26 16:39:43] -rw------- 1 boincer umatlas   8222720 Nov 26 16:39 result.tar.gz
16:39:45 (13710): run_atlas exited; CPU time 348446.913346
16:39:45 (13710): called boinc_finish(0)

</stderr_txt>
]]>

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