Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:05:08 (1676): wrapper (7.7.26015): starting
04:05:08 (1676): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 04:05:08] Arguments: --nthreads 8
[2025-11-26 04:05:08] Threads: 8
[2025-11-26 04:05:08] Checking for CVMFS
[2025-11-26 04:05:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 04:05:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 04:05:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 04:05:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 04:05:08] 2.11.2.0 8814 117458 128396 153315 1 81 11789793 18432000 1885 130560 0 84625057 99.973 5001979 31675 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 04:05:08] CVMFS is ok
[2025-11-26 04:05:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 04:05:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 04:05:08] Further information can be found at the LHC@home message board.
[2025-11-26 04:05:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 04:05:08] Checking for apptainer binary...
[2025-11-26 04:05:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 04:05:08] Running /usr/bin/apptainer --version
[2025-11-26 04:05:08] apptainer version 1.3.2-1.el7
[2025-11-26 04:05:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 04:05:09] c-206-19.aglt2.org
[2025-11-26 04:05:09] apptainer works
[2025-11-26 04:05:09] Set ATHENA_PROC_NUMBER=8
[2025-11-26 04:05:09] Set ATHENA_CORE_NUMBER=8
[2025-11-26 04:05:09] Starting ATLAS job with PandaID=6896923342
[2025-11-26 04:05:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:28:21]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:28:21] 2025-11-27 04:27:42,582 | INFO     | monitor loop #4973: job 0:6896923342 is in state 'finished'
[2025-11-26 23:28:21] 2025-11-27 04:27:42,582 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:28:21] 2025-11-27 04:27:43,970 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 23:28:21] 2025-11-27 04:27:43,976 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2095.1666666666665
[2025-11-26 23:28:21] 2025-11-27 04:27:43,980 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6896923342/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 23:28:21] 2025-11-27 04:27:43,981 | INFO     | extracted standard info from prmon json
[2025-11-26 23:28:21] 2025-11-27 04:27:43,981 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 23:28:21] 2025-11-27 04:27:43,981 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 23:28:21] 2025-11-27 04:27:43,997 | INFO     | fitting pss+swap vs Time
[2025-11-26 23:28:21] 2025-11-27 04:27:43,999 | INFO     | sum of square deviations: 463038330816.40625
[2025-11-26 23:28:21] 2025-11-27 04:27:44,024 | INFO     | sum of deviations: 2309446633062.247
[2025-11-26 23:28:21] 2025-11-27 04:27:44,024 | INFO     | mean x: 1764182776.608049
[2025-11-26 23:28:21] 2025-11-27 04:27:44,024 | INFO     | mean y: 2866265.690288714
[2025-11-26 23:28:21] 2025-11-27 04:27:44,024 | INFO     | intersect: -8796159003.687056
[2025-11-26 23:28:21] 2025-11-27 04:27:44,025 | INFO     | chi2: 4.978094621292068
[2025-11-26 23:28:21] 2025-11-27 04:27:44,027 | INFO     | sum of square deviations: 456988466562.0497
[2025-11-26 23:28:21] 2025-11-27 04:27:44,052 | INFO     | sum of deviations: 2613710740823.814
[2025-11-26 23:28:21] 2025-11-27 04:27:44,052 | INFO     | mean x: 1764182624.1107206
[2025-11-26 23:28:21] 2025-11-27 04:27:44,052 | INFO     | mean y: 2873931.080843585
[2025-11-26 23:28:21] 2025-11-27 04:27:44,052 | INFO     | intersect: -10087234268.152767
[2025-11-26 23:28:21] 2025-11-27 04:27:44,053 | INFO     | chi2: 2.804015034583668
[2025-11-26 23:28:21] 2025-11-27 04:27:44,054 | INFO     | current chi2=2.804015034583668 (change=43.6729261314064 %)
[2025-11-26 23:28:21] 2025-11-27 04:27:44,055 | INFO     | sum of square deviations: 450991533532.6762
[2025-11-26 23:28:21] 2025-11-27 04:27:44,084 | INFO     | sum of deviations: 2722230827827.3896
[2025-11-26 23:28:21] 2025-11-27 04:27:44,084 | INFO     | mean x: 1764182471.6134157
[2025-11-26 23:28:21] 2025-11-27 04:27:44,084 | INFO     | mean y: 2876686.72462489
[2025-11-26 23:28:21] 2025-11-27 04:27:44,084 | INFO     | intersect: -10645908385.84658
[2025-11-26 23:28:21] 2025-11-27 04:27:44,085 | INFO     | chi2: 2.3703011646552525
[2025-11-26 23:28:21] 2025-11-27 04:27:44,086 | INFO     | current chi2=2.3703011646552525 (change=15.467601442187421 %)
[2025-11-26 23:28:21] 2025-11-27 04:27:44,086 | INFO     | right removable region: 1132
[2025-11-26 23:28:21] 2025-11-27 04:27:44,087 | INFO     | sum of square deviations: 456988042612.04944
[2025-11-26 23:28:21] 2025-11-27 04:27:44,112 | INFO     | sum of deviations: 2013864757441.5579
[2025-11-26 23:28:21] 2025-11-27 04:27:44,113 | INFO     | mean x: 1764182929.1107206
[2025-11-26 23:28:21] 2025-11-27 04:27:44,113 | INFO     | mean y: 2873707.5035149385
[2025-11-26 23:28:21] 2025-11-27 04:27:44,113 | INFO     | intersect: -7771565654.867716
[2025-11-26 23:28:21] 2025-11-27 04:27:44,114 | INFO     | chi2: 2.94392823392389
[2025-11-26 23:28:21] 2025-11-27 04:27:44,114 | INFO     | current chi2=2.94392823392389 (change=40.862348792402194 %)
[2025-11-26 23:28:21] 2025-11-27 04:27:44,115 | INFO     | sum of square deviations: 450990685632.6765
[2025-11-26 23:28:21] 2025-11-27 04:27:44,140 | INFO     | sum of deviations: 1935182039272.7607
[2025-11-26 23:28:21] 2025-11-27 04:27:44,140 | INFO     | mean x: 1764183081.6134157
[2025-11-26 23:28:21] 2025-11-27 04:27:44,140 | INFO     | mean y: 2875708.410414828
[2025-11-26 23:28:21] 2025-11-27 04:27:44,141 | INFO     | intersect: -7567159598.943594
[2025-11-26 23:28:21] 2025-11-27 04:27:44,142 | INFO     | chi2: 2.885695554610686
[2025-11-26 23:28:21] 2025-11-27 04:27:44,142 | INFO     | current chi2=2.885695554610686 (change=1.9780604242375595 %)
[2025-11-26 23:28:21] 2025-11-27 04:27:44,142 | INFO     | left removable region: 20
[2025-11-26 23:28:21] 2025-11-27 04:27:44,143 | INFO     | sum of square deviations: 426375479515.625
[2025-11-26 23:28:21] 2025-11-27 04:27:44,167 | INFO     | sum of deviations: 2205494384874.497
[2025-11-26 23:28:21] 2025-11-27 04:27:44,167 | INFO     | mean x: 1764183051.125
[2025-11-26 23:28:21] 2025-11-27 04:27:44,167 | INFO     | mean y: 2889821.010791367
[2025-11-26 23:28:21] 2025-11-27 04:27:44,167 | INFO     | intersect: -9122625130.193993
[2025-11-26 23:28:21] 2025-11-27 04:27:44,168 | INFO     | chi2: 0.20083835776406317
[2025-11-26 23:28:21] 2025-11-27 04:27:44,168 | INFO     | current memory leak: 5.17 B/s (using 1112 data points, chi2=0.20)
[2025-11-26 23:28:21] 2025-11-27 04:27:44,169 | INFO     | could have reported an average CPU frequency of 2625 MHz (41 samples)
[2025-11-26 23:28:21] 2025-11-27 04:27:44,169 | INFO     | ..............................
[2025-11-26 23:28:21] 2025-11-27 04:27:44,169 | INFO     | . Timing measurements:
[2025-11-26 23:28:21] 2025-11-27 04:27:44,169 | INFO     | . get job = 0 s
[2025-11-26 23:28:21] 2025-11-27 04:27:44,170 | INFO     | . initial setup = 2 s
[2025-11-26 23:28:21] 2025-11-27 04:27:44,170 | INFO     | . payload setup = 5 s
[2025-11-26 23:28:21] 2025-11-27 04:27:44,170 | INFO     | . stage-in = 0 s
[2025-11-26 23:28:21] 2025-11-27 04:27:44,170 | INFO     | . payload execution = 69709 s
[2025-11-26 23:28:21] 2025-11-27 04:27:44,170 | INFO     | . stage-out = 3 s
[2025-11-26 23:28:21] 2025-11-27 04:27:44,170 | INFO     | . log creation = 0 s
[2025-11-26 23:28:21] 2025-11-27 04:27:44,170 | INFO     | ..............................
[2025-11-26 23:28:21] 2025-11-27 04:27:44,252 | INFO     | 
[2025-11-26 23:28:21] 2025-11-27 04:27:44,252 | INFO     | job summary report
[2025-11-26 23:28:21] 2025-11-27 04:27:44,252 | INFO     | --------------------------------------------------
[2025-11-26 23:28:21] 2025-11-27 04:27:44,252 | INFO     | PanDA job id: 6896923342
[2025-11-26 23:28:21] 2025-11-27 04:27:44,252 | INFO     | task id: 47556161
[2025-11-26 23:28:21] 2025-11-27 04:27:44,252 | INFO     | errors: (none)
[2025-11-26 23:28:21] 2025-11-27 04:27:44,252 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 23:28:21] 2025-11-27 04:27:44,253 | INFO     | pilot state: finished 
[2025-11-26 23:28:21] 2025-11-27 04:27:44,253 | INFO     | transexitcode: 0
[2025-11-26 23:28:21] 2025-11-27 04:27:44,253 | INFO     | exeerrorcode: 0
[2025-11-26 23:28:21] 2025-11-27 04:27:44,253 | INFO     | exeerrordiag: 
[2025-11-26 23:28:21] 2025-11-27 04:27:44,253 | INFO     | exitcode: 0
[2025-11-26 23:28:21] 2025-11-27 04:27:44,253 | INFO     | exitmsg: OK
[2025-11-26 23:28:21] 2025-11-27 04:27:44,253 | INFO     | cpuconsumptiontime: 541109 s
[2025-11-26 23:28:21] 2025-11-27 04:27:44,253 | INFO     | nevents: 1000
[2025-11-26 23:28:21] 2025-11-27 04:27:44,253 | INFO     | neventsw: 0
[2025-11-26 23:28:21] 2025-11-27 04:27:44,253 | INFO     | pid: 12116
[2025-11-26 23:28:21] 2025-11-27 04:27:44,254 | INFO     | pgrp: 12116
[2025-11-26 23:28:21] 2025-11-27 04:27:44,254 | INFO     | corecount: 8
[2025-11-26 23:28:21] 2025-11-27 04:27:44,254 | INFO     | event service: False
[2025-11-26 23:28:21] 2025-11-27 04:27:44,254 | INFO     | sizes: {0: 2284099, 1: 2284213, 4: 2284503, 11: 2284531, 69717: 2340789, 69721: 2349783, 69723: 2349967, 69728: 2350309}
[2025-11-26 23:28:21] 2025-11-27 04:27:44,254 | INFO     | --------------------------------------------------
[2025-11-26 23:28:21] 2025-11-27 04:27:44,254 | INFO     | 
[2025-11-26 23:28:21] 2025-11-27 04:27:44,254 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 23:28:21] 2025-11-27 04:27:44,269 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 23:28:21] 2025-11-27 04:27:44,270 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 23:28:21] 2025-11-27 04:27:44,270 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 23:28:21] 2025-11-27 04:27:44,270 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 23:28:21] 2025-11-27 04:27:44,270 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 23:28:21] 2025-11-27 04:27:44,270 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 23:28:21] 2025-11-27 04:27:44,270 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 23:28:21] 2025-11-27 04:27:44,270 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 23:28:21] 2025-11-27 04:27:44,271 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 23:28:21] 2025-11-27 04:27:44,271 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 23:28:21] 2025-11-27 04:27:44,271 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 23:28:21] 2025-11-27 04:27:44,271 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 23:28:21] 2025-11-27 04:27:44,271 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 23:28:21] 2025-11-27 04:27:44,271 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 23:28:21] 2025-11-27 04:27:44,271 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 23:28:21] 2025-11-27 04:27:44,271 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 23:28:21] 2025-11-27 04:27:44,271 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 23:28:21] 2025-11-27 04:27:44,272 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 23:28:21] 2025-11-27 04:27:44,272 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 23:28:21] 2025-11-27 04:27:44,272 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 23:28:21] 2025-11-27 04:27:44,272 | INFO     | job 6896923342 has completed (purged errors)
[2025-11-26 23:28:21] 2025-11-27 04:27:44,272 | INFO     | overall cleanup function is called
[2025-11-26 23:28:21] 2025-11-27 04:27:45,283 | INFO     | --- collectZombieJob: --- 10, [12116]
[2025-11-26 23:28:21] 2025-11-27 04:27:45,283 | INFO     | zombie collector waiting for pid 12116
[2025-11-26 23:28:21] 2025-11-27 04:27:45,288 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 23:28:21] 2025-11-27 04:27:45,288 | INFO     | collected zombie processes
[2025-11-26 23:28:21] 2025-11-27 04:27:45,288 | INFO     | will attempt to kill all subprocesses of pid=12116
[2025-11-26 23:28:21] 2025-11-27 04:27:45,394 | INFO     | process IDs to be killed: [12116] (in reverse order)
[2025-11-26 23:28:21] 2025-11-27 04:27:45,432 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 23:28:21] 2025-11-27 04:27:45,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 23:28:21] 2025-11-27 04:27:45,436 | INFO     | did not find any defunct processes belonging to 12116
[2025-11-26 23:28:21] 2025-11-27 04:27:45,438 | INFO     | did not find any defunct processes belonging to 12116
[2025-11-26 23:28:21] 2025-11-27 04:27:45,439 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 23:28:21] 2025-11-27 04:27:45,440 | INFO     | ready for new job
[2025-11-26 23:28:21] 2025-11-27 04:27:45,440 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 23:28:21] 2025-11-27 04:27:45,583 | INFO     | ***************************************
[2025-11-26 23:28:21] 2025-11-27 04:27:45,583 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 23:28:21] 2025-11-27 04:27:45,583 | INFO     | ***************************************
[2025-11-26 23:28:21] 2025-11-27 04:27:45,583 | INFO     | 
[2025-11-26 23:28:21] 2025-11-27 04:27:45,584 | INFO     | architecture information:
[2025-11-26 23:28:21] 2025-11-27 04:27:45,584 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:28:21] 2025-11-27 04:27:45,599 | INFO     | cat /etc/os-release:
[2025-11-26 23:28:21] NAME="CentOS Linux"
[2025-11-26 23:28:21] VERSION="7 (Core)"
[2025-11-26 23:28:21] ID="centos"
[2025-11-26 23:28:21] ID_LIKE="rhel fedora"
[2025-11-26 23:28:21] VERSION_ID="7"
[2025-11-26 23:28:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:28:21] ANSI_COLOR="0;31"
[2025-11-26 23:28:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:28:21] HOME_URL="https://www.centos.org/"
[2025-11-26 23:28:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:28:21] 
[2025-11-26 23:28:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:28:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:28:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:28:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:28:21] 
[2025-11-26 23:28:21] 2025-11-27 04:27:45,599 | INFO     | ***************************************
[2025-11-26 23:28:21] 2025-11-27 04:27:46,102 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 23:28:21] 2025-11-27 04:27:46,122 | INFO     | sufficient remaining disk space (25865224192 B)
[2025-11-26 23:28:21] 2025-11-27 04:27:46,123 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:28:21] 2025-11-27 04:27:46,123 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:28:21] 2025-11-27 04:27:46,123 | INFO     | update_server=False
[2025-11-26 23:28:21] 2025-11-27 04:27:46,123 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:28:21] 2025-11-27 04:27:46,123 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:28:21] 2025-11-27 04:27:46,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:28:21] 2025-11-27 04:27:46,124 | INFO     | aborting loop
[2025-11-26 23:28:21] 2025-11-27 04:27:46,717 | INFO     | all payload control threads have been joined
[2025-11-26 23:28:21] 2025-11-27 04:27:46,814 | INFO     | all data control threads have been joined
[2025-11-26 23:28:21] 2025-11-27 04:27:46,922 | INFO     | all job control threads have been joined
[2025-11-26 23:28:21] 2025-11-27 04:27:47,128 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:28:21] 2025-11-27 04:27:47,129 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:28:21] 2025-11-27 04:27:47,129 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:28:21] 2025-11-27 04:27:47,143 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:28:21] 2025-11-27 04:27:47,383 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:28:21] 2025-11-27 04:27:47,530 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:28:21] 2025-11-27 04:27:47,719 | INFO     | [payload] control thread has finished
[2025-11-26 23:28:21] 2025-11-27 04:27:47,816 | INFO     | [data] control thread has finished
[2025-11-26 23:28:21] 2025-11-27 04:27:47,927 | INFO     | [job] control thread has finished
[2025-11-26 23:28:21] 2025-11-27 04:27:47,954 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:28:21] 2025-11-27 04:27:47,980 | INFO     | [job] validate thread has finished
[2025-11-26 23:28:21] 2025-11-27 04:27:48,091 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:28:21] 2025-11-27 04:27:48,576 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:28:21] 2025-11-27 04:27:48,703 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:28:21] 2025-11-27 04:27:49,149 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:28:21] 2025-11-27 04:27:49,502 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:28:21] 2025-11-27 04:27:53,508 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:28:21] 2025-11-27 04:27:56,629 | INFO     | job.realtimelogging is not enabled
[2025-11-26 23:28:21] 2025-11-27 04:27:57,634 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:28:21] 2025-11-27 04:28:15,633 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:28:21] 2025-11-27 04:28:15,782 | INFO     | PID=5685 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-26 23:28:21] 2025-11-27 04:28:15,782 | INFO     | .. there are 2 such processes running
[2025-11-26 23:28:21] 2025-11-27 04:28:15,783 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:28:21] 2025-11-27 04:28:15,783 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:28:21] 2025-11-27 04:28:15,783 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:28:21] 2025-11-27 04:28:16,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140532131682112)>', '<ExcThread(monitor, started 140531690612480)>']
[2025-11-26 23:28:21] 2025-11-27 04:28:16,788 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:28:21] 2025-11-27 04:28:16,788 | INFO     | [monitor] control thread has ended
[2025-11-26 23:28:21] 2025-11-27 04:28:21,239 | INFO     | all workflow threads have been joined
[2025-11-26 23:28:21] 2025-11-27 04:28:21,239 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:28:21] 2025-11-27 04:28:21,239 | INFO     | traces error code: 0
[2025-11-26 23:28:21] 2025-11-27 04:28:21,239 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:28:21] 2025-11-27 04:28:21,336 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:28:21] 2025-11-27 04:28:21,338 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:28:21] 2025-11-27 04:28:21,340 [wrapper] pilotpid: 5685
[2025-11-26 23:28:21] 2025-11-27 04:28:21,343 [wrapper] Pilot exit status: 0
[2025-11-26 23:28:21] 2025-11-27 04:28:21,349 [wrapper] pandaids: 6896923342
[2025-11-26 23:28:21] 2025-11-27 04:28:21,376 [wrapper] cleanup supervisor_pilot 24699 5686
[2025-11-26 23:28:21] 2025-11-27 04:28:21,378 [wrapper] Test setup, not cleaning
[2025-11-26 23:28:21] 2025-11-27 04:28:21,381 [wrapper] apfmon messages muted
[2025-11-26 23:28:21] 2025-11-27 04:28:21,383 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:28:21] 2025-11-27 04:28:21,386 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:28:21]  *** Error codes and diagnostics ***
[2025-11-26 23:28:21]     "exeErrorCode": 0,
[2025-11-26 23:28:21]     "exeErrorDiag": "",
[2025-11-26 23:28:21]     "pilotErrorCode": 0,
[2025-11-26 23:28:21]     "pilotErrorDiag": "",
[2025-11-26 23:28:21]  *** Listing of results directory ***
[2025-11-26 23:28:21] total 1328828
[2025-11-26 23:28:21] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 05:51 pilot3.tar.gz
[2025-11-26 23:28:21] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 06:31 queuedata.json
[2025-11-26 23:28:21] -rwx------ 1 boincer umatlas     36292 Nov 25 06:31 runpilot2-wrapper.sh
[2025-11-26 23:28:21] -rw-r--r-- 1 boincer umatlas       100 Nov 26 04:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:28:21] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 04:05 run_atlas
[2025-11-26 23:28:21] -rw-r--r-- 1 boincer umatlas       105 Nov 26 04:05 job.xml
[2025-11-26 23:28:21] -rw-r--r-- 2 boincer umatlas 412255950 Nov 26 04:05 EVNT.47483658._002148.pool.root.1
[2025-11-26 23:28:21] drwxrwx--x 2 boincer umatlas      4096 Nov 26 04:05 shared
[2025-11-26 23:28:21] -rw-r--r-- 2 boincer umatlas    590105 Nov 26 04:05 input.tar.gz
[2025-11-26 23:28:21] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 04:05 start_atlas.sh
[2025-11-26 23:28:21] -rw-r--r-- 1 boincer umatlas         0 Nov 26 04:05 boinc_lockfile
[2025-11-26 23:28:21] -rw-r--r-- 1 boincer umatlas      2784 Nov 26 04:05 pandaJob.out
[2025-11-26 23:28:21] -rw------- 1 boincer umatlas        57 Nov 26 04:05 setup.sh.local
[2025-11-26 23:28:21] -rw------- 1 boincer umatlas    991877 Nov 26 04:05 agis_schedconf.cvmfs.json
[2025-11-26 23:28:21] drwx------ 5 boincer umatlas      4096 Nov 26 04:05 pilot3
[2025-11-26 23:28:21] -rw-r--r-- 1 boincer umatlas       533 Nov 26 23:17 boinc_task_state.xml
[2025-11-26 23:28:21] -rw------- 1 boincer umatlas 920616046 Nov 26 23:27 HITS.47556161._001320.pool.root.1
[2025-11-26 23:28:21] -rw------- 1 boincer umatlas        95 Nov 26 23:27 pilot_heartbeat.json
[2025-11-26 23:28:21] -rw------- 1 boincer umatlas      1068 Nov 26 23:27 memory_monitor_summary.json
[2025-11-26 23:28:21] -rw------- 1 boincer umatlas   1516240 Nov 26 23:27 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:28:21] -rw------- 1 boincer umatlas   2315485 Nov 26 23:27 log.47556161._001320.job.log.tgz.1
[2025-11-26 23:28:21] -rw------- 1 boincer umatlas      8651 Nov 26 23:27 heartbeat.json
[2025-11-26 23:28:21] -rw-r--r-- 1 boincer umatlas      5954 Nov 26 23:28 init_data.xml
[2025-11-26 23:28:21] -rw-r--r-- 1 boincer umatlas        29 Nov 26 23:28 wrapper_checkpoint.txt
[2025-11-26 23:28:21] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 23:28 boinc_mmap_file
[2025-11-26 23:28:21] -rw------- 1 boincer umatlas      4892 Nov 26 23:28 pilotlog.txt
[2025-11-26 23:28:21] -rw------- 1 boincer umatlas   9647503 Nov 26 23:28 log.47556161._001320.job.log.1
[2025-11-26 23:28:21] -rw------- 1 boincer umatlas       353 Nov 26 23:28 output.list
[2025-11-26 23:28:21] -rw-r--r-- 1 boincer umatlas       620 Nov 26 23:28 runtime_log
[2025-11-26 23:28:21] -rw------- 1 boincer umatlas  11980800 Nov 26 23:28 result.tar.gz
[2025-11-26 23:28:21] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 23:28 runtime_log.err
[2025-11-26 23:28:21] -rw------- 1 boincer umatlas       668 Nov 26 23:28 mKpKDmbR6h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmESJKDmBOylJo.diag
[2025-11-26 23:28:21] -rw-r--r-- 1 boincer umatlas     21267 Nov 26 23:28 stderr.txt
[2025-11-26 23:28:21] HITS file was successfully produced:
[2025-11-26 23:28:21] -rw------- 1 boincer umatlas 920616046 Nov 26 23:27 shared/HITS.pool.root.1
[2025-11-26 23:28:21]  *** Contents of shared directory: ***
[2025-11-26 23:28:21] total 1313940
[2025-11-26 23:28:21] -rw-r--r-- 2 boincer umatlas 412255950 Nov 26 04:05 ATLAS.root_0
[2025-11-26 23:28:21] -rw-r--r-- 2 boincer umatlas    590105 Nov 26 04:05 input.tar.gz
[2025-11-26 23:28:21] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 04:05 start_atlas.sh
[2025-11-26 23:28:21] -rw------- 1 boincer umatlas 920616046 Nov 26 23:27 HITS.pool.root.1
[2025-11-26 23:28:21] -rw------- 1 boincer umatlas  11980800 Nov 26 23:28 result.tar.gz
23:28:23 (1676): run_atlas exited; CPU time 540140.376129
23:28:23 (1676): called boinc_finish(0)

</stderr_txt>
]]>

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