Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:05:27 (6232): wrapper (7.7.26015): starting
04:05:27 (6232): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 04:05:27] Arguments: --nthreads 8
[2025-11-26 04:05:27] Threads: 8
[2025-11-26 04:05:27] Checking for CVMFS
[2025-11-26 04:05:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 04:05:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 04:05:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 04:05:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 04:05:27] 2.11.2.0 2804 39887 84560 153315 1 81 17840036 20275200 1 130560 0 5242311 99.542 2819096 28953 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 04:05:27] CVMFS is ok
[2025-11-26 04:05:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 04:05:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 04:05:28] Further information can be found at the LHC@home message board.
[2025-11-26 04:05:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 04:05:28] Checking for apptainer binary...
[2025-11-26 04:05:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 04:05:28] Running /usr/bin/apptainer --version
[2025-11-26 04:05:28] apptainer version 1.3.2-1.el7
[2025-11-26 04:05:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 04:05:29] c-204-3.aglt2.org
[2025-11-26 04:05:29] apptainer works
[2025-11-26 04:05:29] Set ATHENA_PROC_NUMBER=8
[2025-11-26 04:05:29] Set ATHENA_CORE_NUMBER=8
[2025-11-26 04:05:29] Starting ATLAS job with PandaID=6896924103
[2025-11-26 04:05:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 16:32:08]  *** The last 200 lines of the pilot log: ***
[2025-11-26 16:32:08] 2025-11-26 21:31:18,030 | INFO     | monitor loop #3289: job 0:6896924103 is in state 'finished'
[2025-11-26 16:32:08] 2025-11-26 21:31:18,038 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:32:08] 2025-11-26 21:31:18,136 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 16:32:08] 2025-11-26 21:31:18,143 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-26 16:32:08] 2025-11-26 21:31:18,146 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896924103/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 16:32:08] 2025-11-26 21:31:18,147 | INFO     | extracted standard info from prmon json
[2025-11-26 16:32:08] 2025-11-26 21:31:18,147 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 16:32:08] 2025-11-26 21:31:18,147 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 16:32:08] 2025-11-26 21:31:18,161 | INFO     | fitting pss+swap vs Time
[2025-11-26 16:32:08] 2025-11-26 21:31:18,162 | INFO     | sum of square deviations: 122120353658.28098
[2025-11-26 16:32:08] 2025-11-26 21:31:18,174 | INFO     | sum of deviations: 898284644836.2479
[2025-11-26 16:32:08] 2025-11-26 21:31:18,174 | INFO     | mean x: 1764170304.633015
[2025-11-26 16:32:08] 2025-11-26 21:31:18,174 | INFO     | mean y: 3251577.0641200547
[2025-11-26 16:32:08] 2025-11-26 21:31:18,174 | INFO     | intersect: -12973513131.317995
[2025-11-26 16:32:08] 2025-11-26 21:31:18,175 | INFO     | chi2: 5.452545422465551
[2025-11-26 16:32:08] 2025-11-26 21:31:18,176 | INFO     | sum of square deviations: 119638439336.26384
[2025-11-26 16:32:08] 2025-11-26 21:31:18,188 | INFO     | sum of deviations: 1151337394302.8633
[2025-11-26 16:32:08] 2025-11-26 21:31:18,188 | INFO     | mean x: 1764170152.1373627
[2025-11-26 16:32:08] 2025-11-26 21:31:18,189 | INFO     | mean y: 3267119.2513736263
[2025-11-26 16:32:08] 2025-11-26 21:31:18,189 | INFO     | intersect: -16974178234.744059
[2025-11-26 16:32:08] 2025-11-26 21:31:18,190 | INFO     | chi2: 2.7927235952352008
[2025-11-26 16:32:08] 2025-11-26 21:31:18,190 | INFO     | current chi2=2.7927235952352008 (change=48.78128692466028 %)
[2025-11-26 16:32:08] 2025-11-26 21:31:18,191 | INFO     | sum of square deviations: 117190386114.21909
[2025-11-26 16:32:08] 2025-11-26 21:31:18,203 | INFO     | sum of deviations: 1236430965527.8552
[2025-11-26 16:32:08] 2025-11-26 21:31:18,203 | INFO     | mean x: 1764169999.6417704
[2025-11-26 16:32:08] 2025-11-26 21:31:18,203 | INFO     | mean y: 3272411.269709544
[2025-11-26 16:32:08] 2025-11-26 21:31:18,203 | INFO     | intersect: -18609810865.769592
[2025-11-26 16:32:08] 2025-11-26 21:31:18,204 | INFO     | chi2: 2.3538126257545486
[2025-11-26 16:32:08] 2025-11-26 21:31:18,204 | INFO     | current chi2=2.3538126257545486 (change=15.716233795191872 %)
[2025-11-26 16:32:08] 2025-11-26 21:31:18,204 | INFO     | right removable region: 722
[2025-11-26 16:32:08] 2025-11-26 21:31:18,205 | INFO     | sum of square deviations: 119638200765.53711
[2025-11-26 16:32:08] 2025-11-26 21:31:18,217 | INFO     | sum of deviations: 674862481929.3191
[2025-11-26 16:32:08] 2025-11-26 21:31:18,217 | INFO     | mean x: 1764170457.135989
[2025-11-26 16:32:08] 2025-11-26 21:31:18,217 | INFO     | mean y: 3265281.835164835
[2025-11-26 16:32:08] 2025-11-26 21:31:18,217 | INFO     | intersect: -9948175358.620625
[2025-11-26 16:32:08] 2025-11-26 21:31:18,218 | INFO     | chi2: 3.2967866259325884
[2025-11-26 16:32:08] 2025-11-26 21:31:18,218 | INFO     | current chi2=3.2967866259325884 (change=39.5367416409007 %)
[2025-11-26 16:32:08] 2025-11-26 21:31:18,219 | INFO     | sum of square deviations: 117189997911.33064
[2025-11-26 16:32:08] 2025-11-26 21:31:18,231 | INFO     | sum of deviations: 621464931063.7904
[2025-11-26 16:32:08] 2025-11-26 21:31:18,232 | INFO     | mean x: 1764170609.6362379
[2025-11-26 16:32:08] 2025-11-26 21:31:18,232 | INFO     | mean y: 3268607.702627939
[2025-11-26 16:32:08] 2025-11-26 21:31:18,232 | INFO     | intersect: -9352224060.979689
[2025-11-26 16:32:08] 2025-11-26 21:31:18,233 | INFO     | chi2: 3.239128845368475
[2025-11-26 16:32:08] 2025-11-26 21:31:18,233 | INFO     | current chi2=3.239128845368475 (change=1.7489084707689724 %)
[2025-11-26 16:32:08] 2025-11-26 21:31:18,233 | INFO     | left removable region: 20
[2025-11-26 16:32:08] 2025-11-26 21:31:18,234 | INFO     | sum of square deviations: 107272340994.59256
[2025-11-26 16:32:08] 2025-11-26 21:31:18,245 | INFO     | sum of deviations: 879605511993.8884
[2025-11-26 16:32:08] 2025-11-26 21:31:18,245 | INFO     | mean x: 1764170579.148148
[2025-11-26 16:32:08] 2025-11-26 21:31:18,245 | INFO     | mean y: 3295428.376068376
[2025-11-26 16:32:08] 2025-11-26 21:31:18,245 | INFO     | intersect: -14462448034.74444
[2025-11-26 16:32:08] 2025-11-26 21:31:18,246 | INFO     | chi2: 0.07832149460263055
[2025-11-26 16:32:08] 2025-11-26 21:31:18,246 | INFO     | current memory leak: 8.20 B/s (using 702 data points, chi2=0.08)
[2025-11-26 16:32:08] 2025-11-26 21:31:18,247 | INFO     | could have reported an average CPU frequency of 2156 MHz (28 samples)
[2025-11-26 16:32:08] 2025-11-26 21:31:18,247 | INFO     | ..............................
[2025-11-26 16:32:08] 2025-11-26 21:31:18,247 | INFO     | . Timing measurements:
[2025-11-26 16:32:08] 2025-11-26 21:31:18,247 | INFO     | . get job = 0 s
[2025-11-26 16:32:08] 2025-11-26 21:31:18,247 | INFO     | . initial setup = 2 s
[2025-11-26 16:32:08] 2025-11-26 21:31:18,247 | INFO     | . payload setup = 8 s
[2025-11-26 16:32:08] 2025-11-26 21:31:18,247 | INFO     | . stage-in = 0 s
[2025-11-26 16:32:08] 2025-11-26 21:31:18,247 | INFO     | . payload execution = 44690 s
[2025-11-26 16:32:08] 2025-11-26 21:31:18,248 | INFO     | . stage-out = 3 s
[2025-11-26 16:32:08] 2025-11-26 21:31:18,248 | INFO     | . log creation = 0 s
[2025-11-26 16:32:08] 2025-11-26 21:31:18,248 | INFO     | ..............................
[2025-11-26 16:32:08] 2025-11-26 21:31:18,720 | INFO     | 
[2025-11-26 16:32:08] 2025-11-26 21:31:18,720 | INFO     | job summary report
[2025-11-26 16:32:08] 2025-11-26 21:31:18,720 | INFO     | --------------------------------------------------
[2025-11-26 16:32:08] 2025-11-26 21:31:18,720 | INFO     | PanDA job id: 6896924103
[2025-11-26 16:32:08] 2025-11-26 21:31:18,721 | INFO     | task id: 47556173
[2025-11-26 16:32:08] 2025-11-26 21:31:18,721 | INFO     | errors: (none)
[2025-11-26 16:32:08] 2025-11-26 21:31:18,721 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 16:32:08] 2025-11-26 21:31:18,721 | INFO     | pilot state: finished 
[2025-11-26 16:32:08] 2025-11-26 21:31:18,721 | INFO     | transexitcode: 0
[2025-11-26 16:32:08] 2025-11-26 21:31:18,721 | INFO     | exeerrorcode: 0
[2025-11-26 16:32:08] 2025-11-26 21:31:18,722 | INFO     | exeerrordiag: 
[2025-11-26 16:32:08] 2025-11-26 21:31:18,722 | INFO     | exitcode: 0
[2025-11-26 16:32:08] 2025-11-26 21:31:18,722 | INFO     | exitmsg: OK
[2025-11-26 16:32:08] 2025-11-26 21:31:18,722 | INFO     | cpuconsumptiontime: 347186 s
[2025-11-26 16:32:08] 2025-11-26 21:31:18,722 | INFO     | nevents: 1000
[2025-11-26 16:32:08] 2025-11-26 21:31:18,722 | INFO     | neventsw: 0
[2025-11-26 16:32:08] 2025-11-26 21:31:18,723 | INFO     | pid: 17457
[2025-11-26 16:32:08] 2025-11-26 21:31:18,723 | INFO     | pgrp: 17457
[2025-11-26 16:32:08] 2025-11-26 21:31:18,723 | INFO     | corecount: 8
[2025-11-26 16:32:08] 2025-11-26 21:31:18,723 | INFO     | event service: False
[2025-11-26 16:32:08] 2025-11-26 21:31:18,723 | INFO     | sizes: {0: 2284312, 6: 2284574, 11: 2284602, 44702: 2330414, 44707: 2339464, 44713: 2339654}
[2025-11-26 16:32:08] 2025-11-26 21:31:18,723 | INFO     | --------------------------------------------------
[2025-11-26 16:32:08] 2025-11-26 21:31:18,724 | INFO     | 
[2025-11-26 16:32:08] 2025-11-26 21:31:18,724 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 16:32:08] 2025-11-26 21:31:18,752 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 16:32:08] 2025-11-26 21:31:18,753 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 16:32:08] 2025-11-26 21:31:18,753 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 16:32:08] 2025-11-26 21:31:18,753 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 16:32:08] 2025-11-26 21:31:18,753 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 16:32:08] 2025-11-26 21:31:18,754 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 16:32:08] 2025-11-26 21:31:18,754 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 16:32:08] 2025-11-26 21:31:18,754 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 16:32:08] 2025-11-26 21:31:18,754 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 16:32:08] 2025-11-26 21:31:18,754 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 16:32:08] 2025-11-26 21:31:18,755 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 16:32:08] 2025-11-26 21:31:18,755 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 16:32:08] 2025-11-26 21:31:18,755 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 16:32:08] 2025-11-26 21:31:18,755 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 16:32:08] 2025-11-26 21:31:18,755 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 16:32:08] 2025-11-26 21:31:18,755 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 16:32:08] 2025-11-26 21:31:18,755 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 16:32:08] 2025-11-26 21:31:18,755 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 16:32:08] 2025-11-26 21:31:18,756 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 16:32:08] 2025-11-26 21:31:18,756 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 16:32:08] 2025-11-26 21:31:18,756 | INFO     | job 6896924103 has completed (purged errors)
[2025-11-26 16:32:08] 2025-11-26 21:31:18,756 | INFO     | overall cleanup function is called
[2025-11-26 16:32:08] 2025-11-26 21:31:19,770 | INFO     | --- collectZombieJob: --- 10, [17457]
[2025-11-26 16:32:08] 2025-11-26 21:31:19,770 | INFO     | zombie collector waiting for pid 17457
[2025-11-26 16:32:08] 2025-11-26 21:31:19,770 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 16:32:08] 2025-11-26 21:31:19,771 | INFO     | collected zombie processes
[2025-11-26 16:32:08] 2025-11-26 21:31:19,771 | INFO     | will attempt to kill all subprocesses of pid=17457
[2025-11-26 16:32:08] 2025-11-26 21:31:19,863 | INFO     | process IDs to be killed: [17457] (in reverse order)
[2025-11-26 16:32:08] 2025-11-26 21:31:19,965 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 16:32:08] 2025-11-26 21:31:19,965 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 16:32:08] 2025-11-26 21:31:19,970 | INFO     | did not find any defunct processes belonging to 17457
[2025-11-26 16:32:08] 2025-11-26 21:31:19,974 | INFO     | did not find any defunct processes belonging to 17457
[2025-11-26 16:32:08] 2025-11-26 21:31:19,977 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 16:32:08] 2025-11-26 21:31:19,977 | INFO     | ready for new job
[2025-11-26 16:32:08] 2025-11-26 21:31:19,977 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 16:32:08] 2025-11-26 21:31:19,980 | INFO     | ***************************************
[2025-11-26 16:32:08] 2025-11-26 21:31:19,980 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 16:32:08] 2025-11-26 21:31:19,980 | INFO     | ***************************************
[2025-11-26 16:32:08] 2025-11-26 21:31:19,980 | INFO     | 
[2025-11-26 16:32:08] 2025-11-26 21:31:19,981 | INFO     | architecture information:
[2025-11-26 16:32:08] 2025-11-26 21:31:19,982 | INFO     | executing command: cat /etc/os-release
[2025-11-26 16:32:08] 2025-11-26 21:31:20,000 | INFO     | cat /etc/os-release:
[2025-11-26 16:32:08] NAME="CentOS Linux"
[2025-11-26 16:32:08] VERSION="7 (Core)"
[2025-11-26 16:32:08] ID="centos"
[2025-11-26 16:32:08] ID_LIKE="rhel fedora"
[2025-11-26 16:32:08] VERSION_ID="7"
[2025-11-26 16:32:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 16:32:08] ANSI_COLOR="0;31"
[2025-11-26 16:32:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 16:32:08] HOME_URL="https://www.centos.org/"
[2025-11-26 16:32:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 16:32:08] 
[2025-11-26 16:32:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 16:32:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 16:32:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 16:32:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 16:32:08] 
[2025-11-26 16:32:08] 2025-11-26 21:31:20,001 | INFO     | ***************************************
[2025-11-26 16:32:08] 2025-11-26 21:31:20,504 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 16:32:08] 2025-11-26 21:31:20,526 | INFO     | sufficient remaining disk space (17472421888 B)
[2025-11-26 16:32:08] 2025-11-26 21:31:20,527 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 16:32:08] 2025-11-26 21:31:20,527 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 16:32:08] 2025-11-26 21:31:20,527 | INFO     | update_server=False
[2025-11-26 16:32:08] 2025-11-26 21:31:20,527 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 16:32:08] 2025-11-26 21:31:20,528 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 16:32:08] 2025-11-26 21:31:20,541 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 16:32:08] 2025-11-26 21:31:20,541 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 16:32:08] 2025-11-26 21:31:20,542 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:32:08] 2025-11-26 21:31:20,542 | INFO     | will abort loop
[2025-11-26 16:32:08] 2025-11-26 21:31:21,002 | INFO     | all payload control threads have been joined
[2025-11-26 16:32:08] 2025-11-26 21:31:21,016 | INFO     | all job control threads have been joined
[2025-11-26 16:32:08] 2025-11-26 21:31:21,452 | INFO     | all data control threads have been joined
[2025-11-26 16:32:08] 2025-11-26 21:31:21,531 | INFO     | [job] retrieve thread has finished
[2025-11-26 16:32:08] 2025-11-26 21:31:21,547 | INFO     | [job] job monitor thread has finished
[2025-11-26 16:32:08] 2025-11-26 21:31:21,685 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 16:32:08] 2025-11-26 21:31:21,707 | INFO     | [data] copytool_in thread has finished
[2025-11-26 16:32:08] 2025-11-26 21:31:21,728 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 16:32:08] 2025-11-26 21:31:22,008 | INFO     | [payload] control thread has finished
[2025-11-26 16:32:08] 2025-11-26 21:31:22,022 | INFO     | [job] control thread has finished
[2025-11-26 16:32:08] 2025-11-26 21:31:22,340 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 16:32:08] 2025-11-26 21:31:22,457 | INFO     | [data] control thread has finished
[2025-11-26 16:32:08] 2025-11-26 21:31:22,534 | INFO     | [data] copytool_out thread has finished
[2025-11-26 16:32:08] 2025-11-26 21:31:22,668 | INFO     | [job] validate thread has finished
[2025-11-26 16:32:08] 2025-11-26 21:31:22,685 | INFO     | [payload] validate_post thread has finished
[2025-11-26 16:32:08] 2025-11-26 21:31:22,693 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 16:32:08] 2025-11-26 21:31:22,739 | INFO     | [payload] failed_post thread has finished
[2025-11-26 16:32:08] 2025-11-26 21:31:22,976 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 16:32:08] 2025-11-26 21:31:23,353 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:32:08] 2025-11-26 21:31:24,372 | INFO     | [job] queue monitor thread has finished
[2025-11-26 16:32:08] 2025-11-26 21:31:26,699 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 16:32:08] 2025-11-26 21:31:50,771 | INFO     | PID=9923 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-26 16:32:08] 2025-11-26 21:31:50,771 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 16:32:08] 2025-11-26 21:31:50,771 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 16:32:08] 2025-11-26 21:31:50,771 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 16:32:08] 2025-11-26 21:32:00,818 | INFO     | [monitor] cgroup control has ended
[2025-11-26 16:32:08] 2025-11-26 21:32:02,628 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139965664941888)>', '<ExcThread(monitor, started 139964914325248)>']
[2025-11-26 16:32:08] 2025-11-26 21:32:02,830 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 16:32:08] 2025-11-26 21:32:02,830 | INFO     | [monitor] control thread has ended
[2025-11-26 16:32:08] 2025-11-26 21:32:07,654 | INFO     | all workflow threads have been joined
[2025-11-26 16:32:08] 2025-11-26 21:32:07,654 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 16:32:08] 2025-11-26 21:32:07,654 | INFO     | traces error code: 0
[2025-11-26 16:32:08] 2025-11-26 21:32:07,655 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 16:32:08] 2025-11-26 21:32:07,770 [wrapper] ==== pilot stdout END ====
[2025-11-26 16:32:08] 2025-11-26 21:32:07,774 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 16:32:08] 2025-11-26 21:32:07,779 [wrapper] pilotpid: 9923
[2025-11-26 16:32:08] 2025-11-26 21:32:07,784 [wrapper] Pilot exit status: 0
[2025-11-26 16:32:08] 2025-11-26 21:32:07,803 [wrapper] pandaids: 6896924103
[2025-11-26 16:32:08] 2025-11-26 21:32:07,856 [wrapper] cleanup supervisor_pilot 20445 9924
[2025-11-26 16:32:08] 2025-11-26 21:32:07,862 [wrapper] Test setup, not cleaning
[2025-11-26 16:32:08] 2025-11-26 21:32:07,867 [wrapper] apfmon messages muted
[2025-11-26 16:32:08] 2025-11-26 21:32:07,873 [wrapper] ==== wrapper stdout END ====
[2025-11-26 16:32:08] 2025-11-26 21:32:07,878 [wrapper] ==== wrapper stderr END ====
[2025-11-26 16:32:08]  *** Error codes and diagnostics ***
[2025-11-26 16:32:08]     "exeErrorCode": 0,
[2025-11-26 16:32:08]     "exeErrorDiag": "",
[2025-11-26 16:32:08]     "pilotErrorCode": 0,
[2025-11-26 16:32:08]     "pilotErrorDiag": "",
[2025-11-26 16:32:08]  *** Listing of results directory ***
[2025-11-26 16:32:08] total 1317040
[2025-11-26 16:32:08] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 05:51 pilot3.tar.gz
[2025-11-26 16:32:08] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 06:38 queuedata.json
[2025-11-26 16:32:08] -rwx------ 1 boincer umatlas     36292 Nov 25 06:39 runpilot2-wrapper.sh
[2025-11-26 16:32:08] -rw-r--r-- 1 boincer umatlas       100 Nov 26 04:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 16:32:08] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 04:05 run_atlas
[2025-11-26 16:32:08] -rw-r--r-- 1 boincer umatlas       105 Nov 26 04:05 job.xml
[2025-11-26 16:32:08] -rw-r--r-- 2 boincer umatlas 406770827 Nov 26 04:05 EVNT.47483658._003078.pool.root.1
[2025-11-26 16:32:08] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 04:05 start_atlas.sh
[2025-11-26 16:32:08] drwxrwx--x 2 boincer umatlas      4096 Nov 26 04:05 shared
[2025-11-26 16:32:08] -rw-r--r-- 2 boincer umatlas    590102 Nov 26 04:05 input.tar.gz
[2025-11-26 16:32:08] -rw-r--r-- 1 boincer umatlas         0 Nov 26 04:05 boinc_lockfile
[2025-11-26 16:32:08] -rw-r--r-- 1 boincer umatlas      2784 Nov 26 04:05 pandaJob.out
[2025-11-26 16:32:08] -rw------- 1 boincer umatlas        57 Nov 26 04:05 setup.sh.local
[2025-11-26 16:32:08] -rw------- 1 boincer umatlas    991877 Nov 26 04:05 agis_schedconf.cvmfs.json
[2025-11-26 16:32:08] drwx------ 5 boincer umatlas      4096 Nov 26 04:05 pilot3
[2025-11-26 16:32:08] -rw-r--r-- 1 boincer umatlas       533 Nov 26 16:20 boinc_task_state.xml
[2025-11-26 16:32:08] -rw------- 1 boincer umatlas 921652424 Nov 26 16:30 HITS.47556173._000607.pool.root.1
[2025-11-26 16:32:08] -rw------- 1 boincer umatlas        95 Nov 26 16:30 pilot_heartbeat.json
[2025-11-26 16:32:08] -rw------- 1 boincer umatlas      1063 Nov 26 16:31 memory_monitor_summary.json
[2025-11-26 16:32:08] -rw------- 1 boincer umatlas   1516240 Nov 26 16:31 agis_ddmendpoints.agis.ALL.json
[2025-11-26 16:32:08] -rw------- 1 boincer umatlas   1983374 Nov 26 16:31 log.47556173._000607.job.log.tgz.1
[2025-11-26 16:32:08] -rw------- 1 boincer umatlas      8672 Nov 26 16:31 heartbeat.json
[2025-11-26 16:32:08] -rw-r--r-- 1 boincer umatlas      5911 Nov 26 16:31 init_data.xml
[2025-11-26 16:32:08] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 16:32 boinc_mmap_file
[2025-11-26 16:32:08] -rw-r--r-- 1 boincer umatlas        29 Nov 26 16:32 wrapper_checkpoint.txt
[2025-11-26 16:32:08] -rw------- 1 boincer umatlas      4931 Nov 26 16:32 pilotlog.txt
[2025-11-26 16:32:08] -rw------- 1 boincer umatlas   6171828 Nov 26 16:32 log.47556173._000607.job.log.1
[2025-11-26 16:32:08] -rw------- 1 boincer umatlas       353 Nov 26 16:32 output.list
[2025-11-26 16:32:08] -rw-r--r-- 1 boincer umatlas       620 Nov 26 16:32 runtime_log
[2025-11-26 16:32:08] -rw------- 1 boincer umatlas   8171520 Nov 26 16:32 result.tar.gz
[2025-11-26 16:32:08] -rw-r--r-- 1 boincer umatlas      9338 Nov 26 16:32 runtime_log.err
[2025-11-26 16:32:08] -rw------- 1 boincer umatlas       667 Nov 26 16:32 qE3NDmSZ6h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEMMKDmhL5dsn.diag
[2025-11-26 16:32:08] -rw-r--r-- 1 boincer umatlas     21271 Nov 26 16:32 stderr.txt
[2025-11-26 16:32:08] HITS file was successfully produced:
[2025-11-26 16:32:08] -rw------- 1 boincer umatlas 921652424 Nov 26 16:30 shared/HITS.pool.root.1
[2025-11-26 16:32:08]  *** Contents of shared directory: ***
[2025-11-26 16:32:08] total 1305872
[2025-11-26 16:32:08] -rw-r--r-- 2 boincer umatlas 406770827 Nov 26 04:05 ATLAS.root_0
[2025-11-26 16:32:08] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 04:05 start_atlas.sh
[2025-11-26 16:32:08] -rw-r--r-- 2 boincer umatlas    590102 Nov 26 04:05 input.tar.gz
[2025-11-26 16:32:08] -rw------- 1 boincer umatlas 921652424 Nov 26 16:30 HITS.pool.root.1
[2025-11-26 16:32:08] -rw------- 1 boincer umatlas   8171520 Nov 26 16:32 result.tar.gz
16:32:09 (6232): run_atlas exited; CPU time 344941.254905
16:32:09 (6232): called boinc_finish(0)

</stderr_txt>
]]>

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