Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:09:36 (30569): wrapper (7.7.26015): starting
04:09:36 (30569): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 04:09:36] Arguments: --nthreads 8
[2025-11-26 04:09:36] Threads: 8
[2025-11-26 04:09:36] Checking for CVMFS
[2025-11-26 04:09:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 04:09:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 04:09:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 04:09:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 04:09:37] 2.11.2.0 2831 42855 83860 153315 2 81 17049655 20275200 1 130560 0 5813989 99.652 2773125 25117 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 04:09:37] CVMFS is ok
[2025-11-26 04:09:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 04:09:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 04:09:37] Further information can be found at the LHC@home message board.
[2025-11-26 04:09:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 04:09:37] Checking for apptainer binary...
[2025-11-26 04:09:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 04:09:37] Running /usr/bin/apptainer --version
[2025-11-26 04:09:37] apptainer version 1.3.2-1.el7
[2025-11-26 04:09:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 04:09:39] c-204-31.aglt2.org
[2025-11-26 04:09:39] apptainer works
[2025-11-26 04:09:39] Set ATHENA_PROC_NUMBER=8
[2025-11-26 04:09:39] Set ATHENA_CORE_NUMBER=8
[2025-11-26 04:09:39] Starting ATLAS job with PandaID=6896296537
[2025-11-26 04:09:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 16:39:16]  *** The last 200 lines of the pilot log: ***
[2025-11-26 16:39:16] 2025-11-26 21:38:28,592 | INFO     | time since job start (44912s) is within the limit (172800.0s)
[2025-11-26 16:39:16] 2025-11-26 21:38:29,929 | INFO     | monitor loop #3296: job 0:6896296537 is in state 'finished'
[2025-11-26 16:39:16] 2025-11-26 21:38:29,929 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:39:16] 2025-11-26 21:38:30,596 | INFO     | time since job start (44914s) is within the limit (172800.0s)
[2025-11-26 16:39:16] 2025-11-26 21:38:31,973 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 16:39:16] 2025-11-26 21:38:31,977 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-26 16:39:16] 2025-11-26 21:38:31,979 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896296537/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 16:39:16] 2025-11-26 21:38:31,980 | INFO     | extracted standard info from prmon json
[2025-11-26 16:39:16] 2025-11-26 21:38:31,980 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 16:39:16] 2025-11-26 21:38:31,981 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 16:39:16] 2025-11-26 21:38:31,993 | INFO     | fitting pss+swap vs Time
[2025-11-26 16:39:16] 2025-11-26 21:38:31,994 | INFO     | sum of square deviations: 123626128356.90083
[2025-11-26 16:39:16] 2025-11-26 21:38:32,005 | INFO     | sum of deviations: 875282537750.5312
[2025-11-26 16:39:16] 2025-11-26 21:38:32,005 | INFO     | mean x: 1764170647.0910325
[2025-11-26 16:39:16] 2025-11-26 21:38:32,005 | INFO     | mean y: 3257756.15625
[2025-11-26 16:39:16] 2025-11-26 21:38:32,006 | INFO     | intersect: -12487206691.23774
[2025-11-26 16:39:16] 2025-11-26 21:38:32,006 | INFO     | chi2: 6.232362873654295
[2025-11-26 16:39:16] 2025-11-26 21:38:32,007 | INFO     | sum of square deviations: 121123776900.14207
[2025-11-26 16:39:16] 2025-11-26 21:38:32,018 | INFO     | sum of deviations: 1140342700890.3555
[2025-11-26 16:39:16] 2025-11-26 21:38:32,018 | INFO     | mean x: 1764170494.5950751
[2025-11-26 16:39:16] 2025-11-26 21:38:32,018 | INFO     | mean y: 3273902.9876880986
[2025-11-26 16:39:16] 2025-11-26 21:38:32,018 | INFO     | intersect: -16605842804.924864
[2025-11-26 16:39:16] 2025-11-26 21:38:32,019 | INFO     | chi2: 3.3404162607787216
[2025-11-26 16:39:16] 2025-11-26 21:38:32,019 | INFO     | current chi2=3.3404162607787216 (change=46.40208972909024 %)
[2025-11-26 16:39:16] 2025-11-26 21:38:32,020 | INFO     | sum of square deviations: 118655426080.85939
[2025-11-26 16:39:16] 2025-11-26 21:38:32,031 | INFO     | sum of deviations: 1246352272977.7827
[2025-11-26 16:39:16] 2025-11-26 21:38:32,031 | INFO     | mean x: 1764170342.0991735
[2025-11-26 16:39:16] 2025-11-26 21:38:32,031 | INFO     | mean y: 3280444.641873278
[2025-11-26 16:39:16] 2025-11-26 21:38:32,032 | INFO     | intersect: -18527500560.66091
[2025-11-26 16:39:16] 2025-11-26 21:38:32,032 | INFO     | chi2: 2.749409993577959
[2025-11-26 16:39:16] 2025-11-26 21:38:32,033 | INFO     | current chi2=2.749409993577959 (change=17.692593409391037 %)
[2025-11-26 16:39:16] 2025-11-26 21:38:32,033 | INFO     | right removable region: 725
[2025-11-26 16:39:16] 2025-11-26 21:38:32,033 | INFO     | sum of square deviations: 121123511550.14203
[2025-11-26 16:39:16] 2025-11-26 21:38:32,044 | INFO     | sum of deviations: 634634927709.6005
[2025-11-26 16:39:16] 2025-11-26 21:38:32,044 | INFO     | mean x: 1764170799.5950751
[2025-11-26 16:39:16] 2025-11-26 21:38:32,045 | INFO     | mean y: 3272396.4445964433
[2025-11-26 16:39:16] 2025-11-26 21:38:32,045 | INFO     | intersect: -9240221236.95226
[2025-11-26 16:39:16] 2025-11-26 21:38:32,046 | INFO     | chi2: 3.7142941075813654
[2025-11-26 16:39:16] 2025-11-26 21:38:32,046 | INFO     | current chi2=3.7142941075813654 (change=40.403115433432404 %)
[2025-11-26 16:39:16] 2025-11-26 21:38:32,047 | INFO     | sum of square deviations: 118655029032.44104
[2025-11-26 16:39:16] 2025-11-26 21:38:32,058 | INFO     | sum of deviations: 577911483666.5281
[2025-11-26 16:39:16] 2025-11-26 21:38:32,058 | INFO     | mean x: 1764170952.0950413
[2025-11-26 16:39:16] 2025-11-26 21:38:32,058 | INFO     | mean y: 3275899.7024793387
[2025-11-26 16:39:16] 2025-11-26 21:38:32,058 | INFO     | intersect: -8589150908.333524
[2025-11-26 16:39:16] 2025-11-26 21:38:32,059 | INFO     | chi2: 3.6443248350752957
[2025-11-26 16:39:16] 2025-11-26 21:38:32,059 | INFO     | current chi2=3.6443248350752957 (change=1.8837838490832786 %)
[2025-11-26 16:39:16] 2025-11-26 21:38:32,059 | INFO     | left removable region: 20
[2025-11-26 16:39:16] 2025-11-26 21:38:32,060 | INFO     | sum of square deviations: 108653636806.16464
[2025-11-26 16:39:16] 2025-11-26 21:38:32,070 | INFO     | sum of deviations: 870808210018.1461
[2025-11-26 16:39:16] 2025-11-26 21:38:32,070 | INFO     | mean x: 1764170921.6070921
[2025-11-26 16:39:16] 2025-11-26 21:38:32,070 | INFO     | mean y: 3304459.0907801418
[2025-11-26 16:39:16] 2025-11-26 21:38:32,070 | INFO     | intersect: -14135702458.380142
[2025-11-26 16:39:16] 2025-11-26 21:38:32,071 | INFO     | chi2: 0.09170587718958012
[2025-11-26 16:39:16] 2025-11-26 21:38:32,071 | INFO     | current memory leak: 8.01 B/s (using 705 data points, chi2=0.09)
[2025-11-26 16:39:16] 2025-11-26 21:38:32,072 | INFO     | could have reported an average CPU frequency of 2175 MHz (28 samples)
[2025-11-26 16:39:16] 2025-11-26 21:38:32,072 | INFO     | ..............................
[2025-11-26 16:39:16] 2025-11-26 21:38:32,072 | INFO     | . Timing measurements:
[2025-11-26 16:39:16] 2025-11-26 21:38:32,072 | INFO     | . get job = 0 s
[2025-11-26 16:39:16] 2025-11-26 21:38:32,072 | INFO     | . initial setup = 2 s
[2025-11-26 16:39:16] 2025-11-26 21:38:32,073 | INFO     | . payload setup = 9 s
[2025-11-26 16:39:16] 2025-11-26 21:38:32,073 | INFO     | . stage-in = 0 s
[2025-11-26 16:39:16] 2025-11-26 21:38:32,073 | INFO     | . payload execution = 44871 s
[2025-11-26 16:39:16] 2025-11-26 21:38:32,073 | INFO     | . stage-out = 3 s
[2025-11-26 16:39:16] 2025-11-26 21:38:32,073 | INFO     | . log creation = 0 s
[2025-11-26 16:39:16] 2025-11-26 21:38:32,073 | INFO     | ..............................
[2025-11-26 16:39:16] 2025-11-26 21:38:32,223 | INFO     | 
[2025-11-26 16:39:16] 2025-11-26 21:38:32,224 | INFO     | job summary report
[2025-11-26 16:39:16] 2025-11-26 21:38:32,224 | INFO     | --------------------------------------------------
[2025-11-26 16:39:16] 2025-11-26 21:38:32,224 | INFO     | PanDA job id: 6896296537
[2025-11-26 16:39:16] 2025-11-26 21:38:32,224 | INFO     | task id: 47556149
[2025-11-26 16:39:16] 2025-11-26 21:38:32,224 | INFO     | errors: (none)
[2025-11-26 16:39:16] 2025-11-26 21:38:32,224 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 16:39:16] 2025-11-26 21:38:32,225 | INFO     | pilot state: finished 
[2025-11-26 16:39:16] 2025-11-26 21:38:32,225 | INFO     | transexitcode: 0
[2025-11-26 16:39:16] 2025-11-26 21:38:32,225 | INFO     | exeerrorcode: 0
[2025-11-26 16:39:16] 2025-11-26 21:38:32,225 | INFO     | exeerrordiag: 
[2025-11-26 16:39:16] 2025-11-26 21:38:32,225 | INFO     | exitcode: 0
[2025-11-26 16:39:16] 2025-11-26 21:38:32,226 | INFO     | exitmsg: OK
[2025-11-26 16:39:16] 2025-11-26 21:38:32,226 | INFO     | cpuconsumptiontime: 348170 s
[2025-11-26 16:39:16] 2025-11-26 21:38:32,226 | INFO     | nevents: 1000
[2025-11-26 16:39:16] 2025-11-26 21:38:32,226 | INFO     | neventsw: 0
[2025-11-26 16:39:16] 2025-11-26 21:38:32,226 | INFO     | pid: 8596
[2025-11-26 16:39:16] 2025-11-26 21:38:32,226 | INFO     | pgrp: 8596
[2025-11-26 16:39:16] 2025-11-26 21:38:32,227 | INFO     | corecount: 8
[2025-11-26 16:39:16] 2025-11-26 21:38:32,227 | INFO     | event service: False
[2025-11-26 16:39:16] 2025-11-26 21:38:32,227 | INFO     | sizes: {0: 2284143, 1: 2284342, 7: 2284604, 11: 2284632, 44884: 2330502, 44885: 2330501, 44889: 2339763, 44898: 2339953}
[2025-11-26 16:39:16] 2025-11-26 21:38:32,227 | INFO     | --------------------------------------------------
[2025-11-26 16:39:16] 2025-11-26 21:38:32,227 | INFO     | 
[2025-11-26 16:39:16] 2025-11-26 21:38:32,228 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 16:39:16] 2025-11-26 21:38:32,257 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 16:39:16] 2025-11-26 21:38:32,258 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 16:39:16] 2025-11-26 21:38:32,258 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 16:39:16] 2025-11-26 21:38:32,258 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 16:39:16] 2025-11-26 21:38:32,258 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 16:39:16] 2025-11-26 21:38:32,259 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 16:39:16] 2025-11-26 21:38:32,259 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 16:39:16] 2025-11-26 21:38:32,259 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 16:39:16] 2025-11-26 21:38:32,259 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 16:39:16] 2025-11-26 21:38:32,259 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 16:39:16] 2025-11-26 21:38:32,260 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 16:39:16] 2025-11-26 21:38:32,260 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 16:39:16] 2025-11-26 21:38:32,260 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 16:39:16] 2025-11-26 21:38:32,260 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 16:39:16] 2025-11-26 21:38:32,260 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 16:39:16] 2025-11-26 21:38:32,260 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 16:39:16] 2025-11-26 21:38:32,261 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 16:39:16] 2025-11-26 21:38:32,261 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 16:39:16] 2025-11-26 21:38:32,261 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 16:39:16] 2025-11-26 21:38:32,261 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 16:39:16] 2025-11-26 21:38:32,261 | INFO     | job 6896296537 has completed (purged errors)
[2025-11-26 16:39:16] 2025-11-26 21:38:32,262 | INFO     | overall cleanup function is called
[2025-11-26 16:39:16] 2025-11-26 21:38:33,273 | INFO     | --- collectZombieJob: --- 10, [8596]
[2025-11-26 16:39:16] 2025-11-26 21:38:33,274 | INFO     | zombie collector waiting for pid 8596
[2025-11-26 16:39:16] 2025-11-26 21:38:33,274 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 16:39:16] 2025-11-26 21:38:33,274 | INFO     | collected zombie processes
[2025-11-26 16:39:16] 2025-11-26 21:38:33,274 | INFO     | will attempt to kill all subprocesses of pid=8596
[2025-11-26 16:39:16] 2025-11-26 21:38:33,368 | INFO     | process IDs to be killed: [8596] (in reverse order)
[2025-11-26 16:39:16] 2025-11-26 21:38:33,433 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 16:39:16] 2025-11-26 21:38:33,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 16:39:16] 2025-11-26 21:38:33,437 | INFO     | did not find any defunct processes belonging to 8596
[2025-11-26 16:39:16] 2025-11-26 21:38:33,440 | INFO     | did not find any defunct processes belonging to 8596
[2025-11-26 16:39:16] 2025-11-26 21:38:33,443 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 16:39:16] 2025-11-26 21:38:33,443 | INFO     | ready for new job
[2025-11-26 16:39:16] 2025-11-26 21:38:33,443 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 16:39:16] 2025-11-26 21:38:33,447 | INFO     | ***************************************
[2025-11-26 16:39:16] 2025-11-26 21:38:33,447 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 16:39:16] 2025-11-26 21:38:33,448 | INFO     | ***************************************
[2025-11-26 16:39:16] 2025-11-26 21:38:33,448 | INFO     | 
[2025-11-26 16:39:16] 2025-11-26 21:38:33,448 | INFO     | architecture information:
[2025-11-26 16:39:16] 2025-11-26 21:38:33,449 | INFO     | executing command: cat /etc/os-release
[2025-11-26 16:39:16] 2025-11-26 21:38:33,469 | INFO     | cat /etc/os-release:
[2025-11-26 16:39:16] NAME="CentOS Linux"
[2025-11-26 16:39:16] VERSION="7 (Core)"
[2025-11-26 16:39:16] ID="centos"
[2025-11-26 16:39:16] ID_LIKE="rhel fedora"
[2025-11-26 16:39:16] VERSION_ID="7"
[2025-11-26 16:39:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 16:39:16] ANSI_COLOR="0;31"
[2025-11-26 16:39:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 16:39:16] HOME_URL="https://www.centos.org/"
[2025-11-26 16:39:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 16:39:16] 
[2025-11-26 16:39:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 16:39:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 16:39:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 16:39:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 16:39:16] 
[2025-11-26 16:39:16] 2025-11-26 21:38:33,469 | INFO     | ***************************************
[2025-11-26 16:39:16] 2025-11-26 21:38:33,973 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 16:39:16] 2025-11-26 21:38:33,992 | INFO     | sufficient remaining disk space (17428381696 B)
[2025-11-26 16:39:16] 2025-11-26 21:38:33,993 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 16:39:16] 2025-11-26 21:38:33,993 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 16:39:16] 2025-11-26 21:38:33,993 | INFO     | update_server=False
[2025-11-26 16:39:16] 2025-11-26 21:38:33,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 16:39:16] 2025-11-26 21:38:33,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:39:16] 2025-11-26 21:38:33,994 | INFO     | aborting loop
[2025-11-26 16:39:16] 2025-11-26 21:38:33,995 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 16:39:16] 2025-11-26 21:38:33,995 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 16:39:16] 2025-11-26 21:38:33,995 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:39:16] 2025-11-26 21:38:34,157 | INFO     | all job control threads have been joined
[2025-11-26 16:39:16] 2025-11-26 21:38:34,363 | INFO     | all payload control threads have been joined
[2025-11-26 16:39:16] 2025-11-26 21:38:34,714 | INFO     | all data control threads have been joined
[2025-11-26 16:39:16] 2025-11-26 21:38:35,000 | INFO     | [job] retrieve thread has finished
[2025-11-26 16:39:16] 2025-11-26 21:38:35,001 | INFO     | [job] job monitor thread has finished
[2025-11-26 16:39:16] 2025-11-26 21:38:35,001 | INFO     | [job] queue monitor thread has finished
[2025-11-26 16:39:16] 2025-11-26 21:38:35,094 | INFO     | [data] copytool_in thread has finished
[2025-11-26 16:39:16] 2025-11-26 21:38:35,163 | INFO     | [job] control thread has finished
[2025-11-26 16:39:16] 2025-11-26 21:38:35,369 | INFO     | [payload] control thread has finished
[2025-11-26 16:39:16] 2025-11-26 21:38:35,383 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 16:39:16] 2025-11-26 21:38:35,537 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 16:39:16] 2025-11-26 21:38:35,568 | INFO     | [payload] failed_post thread has finished
[2025-11-26 16:39:16] 2025-11-26 21:38:35,701 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 16:39:16] 2025-11-26 21:38:35,729 | INFO     | [data] control thread has finished
[2025-11-26 16:39:16] 2025-11-26 21:38:35,937 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 16:39:16] 2025-11-26 21:38:35,962 | INFO     | [job] validate thread has finished
[2025-11-26 16:39:16] 2025-11-26 21:38:35,998 | INFO     | [data] copytool_out thread has finished
[2025-11-26 16:39:16] 2025-11-26 21:38:36,078 | INFO     | [payload] validate_post thread has finished
[2025-11-26 16:39:16] 2025-11-26 21:38:38,000 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 16:39:16] 2025-11-26 21:39:03,729 | INFO     | PID=1858 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-26 16:39:16] 2025-11-26 21:39:03,729 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 16:39:16] 2025-11-26 21:39:03,730 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 16:39:16] 2025-11-26 21:39:03,730 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 16:39:16] 2025-11-26 21:39:10,704 | INFO     | [monitor] cgroup control has ended
[2025-11-26 16:39:16] 2025-11-26 21:39:11,431 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140515430119232)>', '<ExcThread(monitor, started 140514452027136)>']
[2025-11-26 16:39:16] 2025-11-26 21:39:11,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 16:39:16] 2025-11-26 21:39:11,771 | INFO     | [monitor] control thread has ended
[2025-11-26 16:39:16] 2025-11-26 21:39:16,457 | INFO     | all workflow threads have been joined
[2025-11-26 16:39:16] 2025-11-26 21:39:16,458 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 16:39:16] 2025-11-26 21:39:16,458 | INFO     | traces error code: 0
[2025-11-26 16:39:16] 2025-11-26 21:39:16,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 16:39:16] 2025-11-26 21:39:16,601 [wrapper] ==== pilot stdout END ====
[2025-11-26 16:39:16] 2025-11-26 21:39:16,605 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 16:39:16] 2025-11-26 21:39:16,610 [wrapper] pilotpid: 1858
[2025-11-26 16:39:16] 2025-11-26 21:39:16,615 [wrapper] Pilot exit status: 0
[2025-11-26 16:39:16] 2025-11-26 21:39:16,634 [wrapper] pandaids: 6896296537
[2025-11-26 16:39:16] 2025-11-26 21:39:16,686 [wrapper] cleanup supervisor_pilot  6307 1859
[2025-11-26 16:39:16] 2025-11-26 21:39:16,692 [wrapper] Test setup, not cleaning
[2025-11-26 16:39:16] 2025-11-26 21:39:16,697 [wrapper] apfmon messages muted
[2025-11-26 16:39:16] 2025-11-26 21:39:16,702 [wrapper] ==== wrapper stdout END ====
[2025-11-26 16:39:16] 2025-11-26 21:39:16,707 [wrapper] ==== wrapper stderr END ====
[2025-11-26 16:39:16]  *** Error codes and diagnostics ***
[2025-11-26 16:39:16]     "exeErrorCode": 0,
[2025-11-26 16:39:16]     "exeErrorDiag": "",
[2025-11-26 16:39:16]     "pilotErrorCode": 0,
[2025-11-26 16:39:16]     "pilotErrorDiag": "",
[2025-11-26 16:39:16]  *** Listing of results directory ***
[2025-11-26 16:39:16] total 1324524
[2025-11-26 16:39:16] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 18:07 pilot3.tar.gz
[2025-11-26 16:39:16] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 18:21 queuedata.json
[2025-11-26 16:39:16] -rwx------ 1 boincer umatlas     36292 Nov 24 18:24 runpilot2-wrapper.sh
[2025-11-26 16:39:16] -rw-r--r-- 1 boincer umatlas       100 Nov 26 04:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 16:39:16] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 04:09 run_atlas
[2025-11-26 16:39:16] -rw-r--r-- 1 boincer umatlas       105 Nov 26 04:09 job.xml
[2025-11-26 16:39:16] -rw-r--r-- 2 boincer umatlas 409926041 Nov 26 04:09 EVNT.47483658._001446.pool.root.1
[2025-11-26 16:39:16] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 04:09 start_atlas.sh
[2025-11-26 16:39:16] drwxrwx--x 2 boincer umatlas      4096 Nov 26 04:09 shared
[2025-11-26 16:39:16] -rw-r--r-- 2 boincer umatlas    590107 Nov 26 04:09 input.tar.gz
[2025-11-26 16:39:16] -rw-r--r-- 1 boincer umatlas         0 Nov 26 04:09 boinc_lockfile
[2025-11-26 16:39:16] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 04:09 pandaJob.out
[2025-11-26 16:39:16] -rw------- 1 boincer umatlas        57 Nov 26 04:09 setup.sh.local
[2025-11-26 16:39:16] -rw------- 1 boincer umatlas    991877 Nov 26 04:09 agis_schedconf.cvmfs.json
[2025-11-26 16:39:16] drwx------ 5 boincer umatlas      4096 Nov 26 04:09 pilot3
[2025-11-26 16:39:16] -rw-r--r-- 1 boincer umatlas       533 Nov 26 16:26 boinc_task_state.xml
[2025-11-26 16:39:16] -rw-r--r-- 1 boincer umatlas      5913 Nov 26 16:37 init_data.xml
[2025-11-26 16:39:16] -rw------- 1 boincer umatlas 926138652 Nov 26 16:37 HITS.47556149._004324.pool.root.1
[2025-11-26 16:39:16] -rw------- 1 boincer umatlas        95 Nov 26 16:38 pilot_heartbeat.json
[2025-11-26 16:39:16] -rw------- 1 boincer umatlas      1064 Nov 26 16:38 memory_monitor_summary.json
[2025-11-26 16:39:16] -rw------- 1 boincer umatlas   1516240 Nov 26 16:38 agis_ddmendpoints.agis.ALL.json
[2025-11-26 16:39:16] -rw------- 1 boincer umatlas   1981385 Nov 26 16:38 log.47556149._004324.job.log.tgz.1
[2025-11-26 16:39:16] -rw------- 1 boincer umatlas      8658 Nov 26 16:38 heartbeat.json
[2025-11-26 16:39:16] -rw-r--r-- 1 boincer umatlas        29 Nov 26 16:39 wrapper_checkpoint.txt
[2025-11-26 16:39:16] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 16:39 boinc_mmap_file
[2025-11-26 16:39:16] -rw------- 1 boincer umatlas      4745 Nov 26 16:39 pilotlog.txt
[2025-11-26 16:39:16] -rw------- 1 boincer umatlas   6183710 Nov 26 16:39 log.47556149._004324.job.log.1
[2025-11-26 16:39:16] -rw------- 1 boincer umatlas       353 Nov 26 16:39 output.list
[2025-11-26 16:39:16] -rw-r--r-- 1 boincer umatlas       620 Nov 26 16:39 runtime_log
[2025-11-26 16:39:16] -rw------- 1 boincer umatlas   8181760 Nov 26 16:39 result.tar.gz
[2025-11-26 16:39:16] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 16:39 runtime_log.err
[2025-11-26 16:39:16] -rw------- 1 boincer umatlas       668 Nov 26 16:39 4O5NDm45uh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfzLKDmvLhIHn.diag
[2025-11-26 16:39:16] -rw-r--r-- 1 boincer umatlas     21306 Nov 26 16:39 stderr.txt
[2025-11-26 16:39:16] HITS file was successfully produced:
[2025-11-26 16:39:16] -rw------- 1 boincer umatlas 926138652 Nov 26 16:37 shared/HITS.pool.root.1
[2025-11-26 16:39:16]  *** Contents of shared directory: ***
[2025-11-26 16:39:16] total 1313348
[2025-11-26 16:39:16] -rw-r--r-- 2 boincer umatlas 409926041 Nov 26 04:09 ATLAS.root_0
[2025-11-26 16:39:16] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 04:09 start_atlas.sh
[2025-11-26 16:39:16] -rw-r--r-- 2 boincer umatlas    590107 Nov 26 04:09 input.tar.gz
[2025-11-26 16:39:16] -rw------- 1 boincer umatlas 926138652 Nov 26 16:37 HITS.pool.root.1
[2025-11-26 16:39:16] -rw------- 1 boincer umatlas   8181760 Nov 26 16:39 result.tar.gz
16:39:18 (30569): run_atlas exited; CPU time 345633.993133
16:39:18 (30569): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN