Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:55:12 (19085): wrapper (7.7.26015): starting
03:55:12 (19085): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 03:55:12] Arguments: --nthreads 8
[2025-11-26 03:55:12] Threads: 8
[2025-11-26 03:55:12] Checking for CVMFS
[2025-11-26 03:55:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 03:55:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 03:55:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 03:55:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 03:55:12] 2.11.2.0 2857 67423 86576 153315 3 81 19366147 20275200 1 130560 0 17975469 99.855 3796503 29671 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 03:55:12] CVMFS is ok
[2025-11-26 03:55:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 03:55:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 03:55:12] Further information can be found at the LHC@home message board.
[2025-11-26 03:55:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 03:55:12] Checking for apptainer binary...
[2025-11-26 03:55:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 03:55:12] Running /usr/bin/apptainer --version
[2025-11-26 03:55:12] apptainer version 1.3.2-1.el7
[2025-11-26 03:55:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 03:55:14] c-204-10.aglt2.org
[2025-11-26 03:55:14] apptainer works
[2025-11-26 03:55:14] Set ATHENA_PROC_NUMBER=8
[2025-11-26 03:55:14] Set ATHENA_CORE_NUMBER=8
[2025-11-26 03:55:14] Starting ATLAS job with PandaID=6896922918
[2025-11-26 03:55:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 16:36:53]  *** The last 200 lines of the pilot log: ***
[2025-11-26 16:36:53] 2025-11-26 21:36:15,333 | INFO     | PID=22764 has CPU usage=14.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 16:36:53] 2025-11-26 21:36:15,778 | INFO     | monitor loop #3358: job 0:6896922918 is in state 'finished'
[2025-11-26 16:36:53] 2025-11-26 21:36:15,779 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:36:53] 2025-11-26 21:36:16,334 | INFO     | time since job start (45643s) is within the limit (172800.0s)
[2025-11-26 16:36:53] 2025-11-26 21:36:17,436 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 16:36:53] 2025-11-26 21:36:17,440 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-26 16:36:53] 2025-11-26 21:36:17,442 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896922918/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 16:36:53] 2025-11-26 21:36:17,443 | INFO     | extracted standard info from prmon json
[2025-11-26 16:36:53] 2025-11-26 21:36:17,443 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 16:36:53] 2025-11-26 21:36:17,444 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 16:36:53] 2025-11-26 21:36:17,457 | INFO     | fitting pss+swap vs Time
[2025-11-26 16:36:53] 2025-11-26 21:36:17,458 | INFO     | sum of square deviations: 129772873150.10147
[2025-11-26 16:36:53] 2025-11-26 21:36:17,470 | INFO     | sum of deviations: 710924641354.5499
[2025-11-26 16:36:53] 2025-11-26 21:36:17,470 | INFO     | mean x: 1764170150.0721924
[2025-11-26 16:36:53] 2025-11-26 21:36:17,470 | INFO     | mean y: 2852570.415775401
[2025-11-26 16:36:53] 2025-11-26 21:36:17,470 | INFO     | intersect: -9661663601.448725
[2025-11-26 16:36:53] 2025-11-26 21:36:17,471 | INFO     | chi2: 6.384773353610453
[2025-11-26 16:36:53] 2025-11-26 21:36:17,472 | INFO     | sum of square deviations: 127187969173.4539
[2025-11-26 16:36:53] 2025-11-26 21:36:17,483 | INFO     | sum of deviations: 926485300461.7523
[2025-11-26 16:36:53] 2025-11-26 21:36:17,484 | INFO     | mean x: 1764169997.5760431
[2025-11-26 16:36:53] 2025-11-26 21:36:17,484 | INFO     | mean y: 2865280.0309555857
[2025-11-26 16:36:53] 2025-11-26 21:36:17,484 | INFO     | intersect: -12848016614.630116
[2025-11-26 16:36:53] 2025-11-26 21:36:17,485 | INFO     | chi2: 3.903315576397216
[2025-11-26 16:36:53] 2025-11-26 21:36:17,485 | INFO     | current chi2=3.903315576397216 (change=38.865244540121786 %)
[2025-11-26 16:36:53] 2025-11-26 21:36:17,486 | INFO     | sum of square deviations: 124637623984.28316
[2025-11-26 16:36:53] 2025-11-26 21:36:17,496 | INFO     | sum of deviations: 1052620009877.0524
[2025-11-26 16:36:53] 2025-11-26 21:36:17,497 | INFO     | mean x: 1764169845.0799458
[2025-11-26 16:36:53] 2025-11-26 21:36:17,497 | INFO     | mean y: 2872822.287262873
[2025-11-26 16:36:53] 2025-11-26 21:36:17,497 | INFO     | intersect: -14896323908.123924
[2025-11-26 16:36:53] 2025-11-26 21:36:17,498 | INFO     | chi2: 2.982880087845583
[2025-11-26 16:36:53] 2025-11-26 21:36:17,498 | INFO     | current chi2=2.982880087845583 (change=23.580862744415874 %)
[2025-11-26 16:36:53] 2025-11-26 21:36:17,498 | INFO     | right removable region: 737
[2025-11-26 16:36:53] 2025-11-26 21:36:17,499 | INFO     | sum of square deviations: 127187708093.45389
[2025-11-26 16:36:53] 2025-11-26 21:36:17,510 | INFO     | sum of deviations: 521374075165.8374
[2025-11-26 16:36:53] 2025-11-26 21:36:17,510 | INFO     | mean x: 1764170302.5760431
[2025-11-26 16:36:53] 2025-11-26 21:36:17,510 | INFO     | mean y: 2863733.339165545
[2025-11-26 16:36:53] 2025-11-26 21:36:17,510 | INFO     | intersect: -7228909475.945986
[2025-11-26 16:36:53] 2025-11-26 21:36:17,511 | INFO     | chi2: 4.419614854219734
[2025-11-26 16:36:53] 2025-11-26 21:36:17,511 | INFO     | current chi2=4.419614854219734 (change=30.77882942045959 %)
[2025-11-26 16:36:53] 2025-11-26 21:36:17,512 | INFO     | sum of square deviations: 124637237549.75085
[2025-11-26 16:36:53] 2025-11-26 21:36:17,523 | INFO     | sum of deviations: 481425895835.5639
[2025-11-26 16:36:53] 2025-11-26 21:36:17,523 | INFO     | mean x: 1764170455.0758808
[2025-11-26 16:36:53] 2025-11-26 21:36:17,523 | INFO     | mean y: 2866120.632791328
[2025-11-26 16:36:53] 2025-11-26 21:36:17,523 | INFO     | intersect: -6811448432.853059
[2025-11-26 16:36:53] 2025-11-26 21:36:17,524 | INFO     | chi2: 4.382716949696478
[2025-11-26 16:36:53] 2025-11-26 21:36:17,524 | INFO     | current chi2=4.382716949696478 (change=0.8348669678315265 %)
[2025-11-26 16:36:53] 2025-11-26 21:36:17,524 | INFO     | left removable region: 20
[2025-11-26 16:36:53] 2025-11-26 21:36:17,525 | INFO     | sum of square deviations: 114297442943.26656
[2025-11-26 16:36:53] 2025-11-26 21:36:17,536 | INFO     | sum of deviations: 794359502593.6239
[2025-11-26 16:36:53] 2025-11-26 21:36:17,536 | INFO     | mean x: 1764170424.591353
[2025-11-26 16:36:53] 2025-11-26 21:36:17,536 | INFO     | mean y: 2891697.3263598327
[2025-11-26 16:36:53] 2025-11-26 21:36:17,536 | INFO     | intersect: -12257973505.619347
[2025-11-26 16:36:53] 2025-11-26 21:36:17,537 | INFO     | chi2: 0.7752578472671132
[2025-11-26 16:36:53] 2025-11-26 21:36:17,537 | INFO     | current memory leak: 6.95 B/s (using 717 data points, chi2=0.78)
[2025-11-26 16:36:53] 2025-11-26 21:36:17,538 | INFO     | could have reported an average CPU frequency of 2169 MHz (28 samples)
[2025-11-26 16:36:53] 2025-11-26 21:36:17,538 | INFO     | ..............................
[2025-11-26 16:36:53] 2025-11-26 21:36:17,538 | INFO     | . Timing measurements:
[2025-11-26 16:36:53] 2025-11-26 21:36:17,538 | INFO     | . get job = 0 s
[2025-11-26 16:36:53] 2025-11-26 21:36:17,539 | INFO     | . initial setup = 2 s
[2025-11-26 16:36:53] 2025-11-26 21:36:17,539 | INFO     | . payload setup = 9 s
[2025-11-26 16:36:53] 2025-11-26 21:36:17,539 | INFO     | . stage-in = 0 s
[2025-11-26 16:36:53] 2025-11-26 21:36:17,539 | INFO     | . payload execution = 45603 s
[2025-11-26 16:36:53] 2025-11-26 21:36:17,539 | INFO     | . stage-out = 3 s
[2025-11-26 16:36:53] 2025-11-26 21:36:17,539 | INFO     | . log creation = 0 s
[2025-11-26 16:36:53] 2025-11-26 21:36:17,539 | INFO     | ..............................
[2025-11-26 16:36:53] 2025-11-26 21:36:17,639 | INFO     | 
[2025-11-26 16:36:53] 2025-11-26 21:36:17,640 | INFO     | job summary report
[2025-11-26 16:36:53] 2025-11-26 21:36:17,640 | INFO     | --------------------------------------------------
[2025-11-26 16:36:53] 2025-11-26 21:36:17,640 | INFO     | PanDA job id: 6896922918
[2025-11-26 16:36:53] 2025-11-26 21:36:17,640 | INFO     | task id: 47556161
[2025-11-26 16:36:53] 2025-11-26 21:36:17,641 | INFO     | errors: (none)
[2025-11-26 16:36:53] 2025-11-26 21:36:17,641 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 16:36:53] 2025-11-26 21:36:17,641 | INFO     | pilot state: finished 
[2025-11-26 16:36:53] 2025-11-26 21:36:17,641 | INFO     | transexitcode: 0
[2025-11-26 16:36:53] 2025-11-26 21:36:17,641 | INFO     | exeerrorcode: 0
[2025-11-26 16:36:53] 2025-11-26 21:36:17,641 | INFO     | exeerrordiag: 
[2025-11-26 16:36:53] 2025-11-26 21:36:17,642 | INFO     | exitcode: 0
[2025-11-26 16:36:53] 2025-11-26 21:36:17,642 | INFO     | exitmsg: OK
[2025-11-26 16:36:53] 2025-11-26 21:36:17,642 | INFO     | cpuconsumptiontime: 350276 s
[2025-11-26 16:36:53] 2025-11-26 21:36:17,642 | INFO     | nevents: 1000
[2025-11-26 16:36:53] 2025-11-26 21:36:17,642 | INFO     | neventsw: 0
[2025-11-26 16:36:53] 2025-11-26 21:36:17,642 | INFO     | pid: 29204
[2025-11-26 16:36:53] 2025-11-26 21:36:17,643 | INFO     | pgrp: 29204
[2025-11-26 16:36:53] 2025-11-26 21:36:17,643 | INFO     | corecount: 8
[2025-11-26 16:36:53] 2025-11-26 21:36:17,643 | INFO     | event service: False
[2025-11-26 16:36:53] 2025-11-26 21:36:17,643 | INFO     | sizes: {0: 2284258, 6: 2284520, 11: 2284548, 45616: 2330723, 45620: 2339773, 45627: 2339963}
[2025-11-26 16:36:53] 2025-11-26 21:36:17,643 | INFO     | --------------------------------------------------
[2025-11-26 16:36:53] 2025-11-26 21:36:17,644 | INFO     | 
[2025-11-26 16:36:53] 2025-11-26 21:36:17,644 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 16:36:53] 2025-11-26 21:36:17,671 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 16:36:53] 2025-11-26 21:36:17,672 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 16:36:53] 2025-11-26 21:36:17,672 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 16:36:53] 2025-11-26 21:36:17,672 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 16:36:53] 2025-11-26 21:36:17,672 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 16:36:53] 2025-11-26 21:36:17,673 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 16:36:53] 2025-11-26 21:36:17,673 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 16:36:53] 2025-11-26 21:36:17,673 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 16:36:53] 2025-11-26 21:36:17,673 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 16:36:53] 2025-11-26 21:36:17,673 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 16:36:53] 2025-11-26 21:36:17,674 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 16:36:53] 2025-11-26 21:36:17,674 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 16:36:53] 2025-11-26 21:36:17,674 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 16:36:53] 2025-11-26 21:36:17,674 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 16:36:53] 2025-11-26 21:36:17,674 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 16:36:53] 2025-11-26 21:36:17,674 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 16:36:53] 2025-11-26 21:36:17,675 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 16:36:53] 2025-11-26 21:36:17,675 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 16:36:53] 2025-11-26 21:36:17,675 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 16:36:53] 2025-11-26 21:36:17,675 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 16:36:53] 2025-11-26 21:36:17,676 | INFO     | job 6896922918 has completed (purged errors)
[2025-11-26 16:36:53] 2025-11-26 21:36:17,676 | INFO     | overall cleanup function is called
[2025-11-26 16:36:53] 2025-11-26 21:36:18,691 | INFO     | --- collectZombieJob: --- 10, [29204]
[2025-11-26 16:36:53] 2025-11-26 21:36:18,691 | INFO     | zombie collector waiting for pid 29204
[2025-11-26 16:36:53] 2025-11-26 21:36:18,692 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 16:36:53] 2025-11-26 21:36:18,692 | INFO     | collected zombie processes
[2025-11-26 16:36:53] 2025-11-26 21:36:18,692 | INFO     | will attempt to kill all subprocesses of pid=29204
[2025-11-26 16:36:53] 2025-11-26 21:36:18,790 | INFO     | process IDs to be killed: [29204] (in reverse order)
[2025-11-26 16:36:53] 2025-11-26 21:36:18,853 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 16:36:53] 2025-11-26 21:36:18,854 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 16:36:53] 2025-11-26 21:36:18,858 | INFO     | did not find any defunct processes belonging to 29204
[2025-11-26 16:36:53] 2025-11-26 21:36:18,862 | INFO     | did not find any defunct processes belonging to 29204
[2025-11-26 16:36:53] 2025-11-26 21:36:18,864 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 16:36:53] 2025-11-26 21:36:18,865 | INFO     | ready for new job
[2025-11-26 16:36:53] 2025-11-26 21:36:18,865 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 16:36:53] 2025-11-26 21:36:18,869 | INFO     | ***************************************
[2025-11-26 16:36:53] 2025-11-26 21:36:18,870 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 16:36:53] 2025-11-26 21:36:18,870 | INFO     | ***************************************
[2025-11-26 16:36:53] 2025-11-26 21:36:18,870 | INFO     | 
[2025-11-26 16:36:53] 2025-11-26 21:36:18,870 | INFO     | architecture information:
[2025-11-26 16:36:53] 2025-11-26 21:36:18,871 | INFO     | executing command: cat /etc/os-release
[2025-11-26 16:36:53] 2025-11-26 21:36:18,892 | INFO     | cat /etc/os-release:
[2025-11-26 16:36:53] NAME="CentOS Linux"
[2025-11-26 16:36:53] VERSION="7 (Core)"
[2025-11-26 16:36:53] ID="centos"
[2025-11-26 16:36:53] ID_LIKE="rhel fedora"
[2025-11-26 16:36:53] VERSION_ID="7"
[2025-11-26 16:36:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 16:36:53] ANSI_COLOR="0;31"
[2025-11-26 16:36:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 16:36:53] HOME_URL="https://www.centos.org/"
[2025-11-26 16:36:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 16:36:53] 
[2025-11-26 16:36:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 16:36:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 16:36:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 16:36:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 16:36:53] 
[2025-11-26 16:36:53] 2025-11-26 21:36:18,893 | INFO     | ***************************************
[2025-11-26 16:36:53] 2025-11-26 21:36:19,396 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 16:36:53] 2025-11-26 21:36:19,417 | INFO     | sufficient remaining disk space (17475567616 B)
[2025-11-26 16:36:53] 2025-11-26 21:36:19,417 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 16:36:53] 2025-11-26 21:36:19,418 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 16:36:53] 2025-11-26 21:36:19,418 | INFO     | update_server=False
[2025-11-26 16:36:53] 2025-11-26 21:36:19,418 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 16:36:53] 2025-11-26 21:36:19,418 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 16:36:53] 2025-11-26 21:36:19,419 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:36:53] 2025-11-26 21:36:19,419 | INFO     | aborting loop
[2025-11-26 16:36:53] 2025-11-26 21:36:19,420 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:36:53] 2025-11-26 21:36:20,017 | INFO     | all job control threads have been joined
[2025-11-26 16:36:53] 2025-11-26 21:36:20,057 | INFO     | all data control threads have been joined
[2025-11-26 16:36:53] 2025-11-26 21:36:20,424 | INFO     | [job] retrieve thread has finished
[2025-11-26 16:36:53] 2025-11-26 21:36:20,425 | INFO     | [job] job monitor thread has finished
[2025-11-26 16:36:53] 2025-11-26 21:36:20,425 | INFO     | [job] queue monitor thread has finished
[2025-11-26 16:36:53] 2025-11-26 21:36:20,493 | INFO     | [data] copytool_in thread has finished
[2025-11-26 16:36:53] 2025-11-26 21:36:20,628 | INFO     | all payload control threads have been joined
[2025-11-26 16:36:53] 2025-11-26 21:36:20,641 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 16:36:53] 2025-11-26 21:36:20,718 | INFO     | [job] validate thread has finished
[2025-11-26 16:36:53] 2025-11-26 21:36:20,779 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 16:36:53] 2025-11-26 21:36:21,022 | INFO     | [job] control thread has finished
[2025-11-26 16:36:53] 2025-11-26 21:36:21,061 | INFO     | [data] control thread has finished
[2025-11-26 16:36:53] 2025-11-26 21:36:21,241 | INFO     | [payload] validate_post thread has finished
[2025-11-26 16:36:53] 2025-11-26 21:36:21,425 | INFO     | [data] copytool_out thread has finished
[2025-11-26 16:36:53] 2025-11-26 21:36:21,488 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 16:36:53] 2025-11-26 21:36:21,635 | INFO     | [payload] control thread has finished
[2025-11-26 16:36:53] 2025-11-26 21:36:21,743 | INFO     | [payload] failed_post thread has finished
[2025-11-26 16:36:53] 2025-11-26 21:36:21,814 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 16:36:53] 2025-11-26 21:36:21,906 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 16:36:53] 2025-11-26 21:36:25,912 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 16:36:53] 2025-11-26 21:36:48,316 | INFO     | [monitor] cgroup control has ended
[2025-11-26 16:36:53] 2025-11-26 21:36:48,449 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140520796014400)>', '<ExcThread(monitor, started 140519829128960)>']
[2025-11-26 16:36:53] 2025-11-26 21:36:49,556 | INFO     | PID=22764 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 16:36:53] 2025-11-26 21:36:49,557 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 16:36:53] 2025-11-26 21:36:49,557 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 16:36:53] 2025-11-26 21:36:49,557 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 16:36:53] 2025-11-26 21:36:49,557 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 16:36:53] 2025-11-26 21:36:49,557 | INFO     | [monitor] control thread has ended
[2025-11-26 16:36:53] 2025-11-26 21:36:53,471 | INFO     | all workflow threads have been joined
[2025-11-26 16:36:53] 2025-11-26 21:36:53,472 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 16:36:53] 2025-11-26 21:36:53,473 | INFO     | traces error code: 0
[2025-11-26 16:36:53] 2025-11-26 21:36:53,473 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 16:36:53] 2025-11-26 21:36:53,613 [wrapper] ==== pilot stdout END ====
[2025-11-26 16:36:53] 2025-11-26 21:36:53,618 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 16:36:53] 2025-11-26 21:36:53,622 [wrapper] pilotpid: 22764
[2025-11-26 16:36:53] 2025-11-26 21:36:53,627 [wrapper] Pilot exit status: 0
[2025-11-26 16:36:53] 2025-11-26 21:36:53,644 [wrapper] pandaids: 6896922918
[2025-11-26 16:36:53] 2025-11-26 21:36:53,693 [wrapper] cleanup supervisor_pilot   556 22765
[2025-11-26 16:36:53] 2025-11-26 21:36:53,698 [wrapper] Test setup, not cleaning
[2025-11-26 16:36:53] 2025-11-26 21:36:53,703 [wrapper] apfmon messages muted
[2025-11-26 16:36:53] 2025-11-26 21:36:53,708 [wrapper] ==== wrapper stdout END ====
[2025-11-26 16:36:53] 2025-11-26 21:36:53,712 [wrapper] ==== wrapper stderr END ====
[2025-11-26 16:36:53]  *** Error codes and diagnostics ***
[2025-11-26 16:36:53]     "exeErrorCode": 0,
[2025-11-26 16:36:53]     "exeErrorDiag": "",
[2025-11-26 16:36:53]     "pilotErrorCode": 0,
[2025-11-26 16:36:53]     "pilotErrorDiag": "",
[2025-11-26 16:36:53]  *** Listing of results directory ***
[2025-11-26 16:36:53] total 1310848
[2025-11-26 16:36:53] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 05:51 pilot3.tar.gz
[2025-11-26 16:36:53] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 06:09 queuedata.json
[2025-11-26 16:36:53] -rwx------ 1 boincer umatlas     36292 Nov 25 06:11 runpilot2-wrapper.sh
[2025-11-26 16:36:53] -rw-r--r-- 1 boincer umatlas       100 Nov 26 03:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 16:36:53] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 03:55 run_atlas
[2025-11-26 16:36:53] -rw-r--r-- 1 boincer umatlas       105 Nov 26 03:55 job.xml
[2025-11-26 16:36:53] -rw-r--r-- 2 boincer umatlas 409768421 Nov 26 03:55 EVNT.47483658._002144.pool.root.1
[2025-11-26 16:36:53] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 03:55 start_atlas.sh
[2025-11-26 16:36:53] drwxrwx--x 2 boincer umatlas      4096 Nov 26 03:55 shared
[2025-11-26 16:36:53] -rw-r--r-- 2 boincer umatlas    590109 Nov 26 03:55 input.tar.gz
[2025-11-26 16:36:53] -rw-r--r-- 1 boincer umatlas         0 Nov 26 03:55 boinc_lockfile
[2025-11-26 16:36:53] -rw-r--r-- 1 boincer umatlas      2782 Nov 26 03:55 pandaJob.out
[2025-11-26 16:36:53] -rw------- 1 boincer umatlas        57 Nov 26 03:55 setup.sh.local
[2025-11-26 16:36:53] -rw------- 1 boincer umatlas    991877 Nov 26 03:55 agis_schedconf.cvmfs.json
[2025-11-26 16:36:53] drwx------ 5 boincer umatlas      4096 Nov 26 03:55 pilot3
[2025-11-26 16:36:53] -rw-r--r-- 1 boincer umatlas       532 Nov 26 16:18 boinc_task_state.xml
[2025-11-26 16:36:53] -rw-r--r-- 1 boincer umatlas      5913 Nov 26 16:29 init_data.xml
[2025-11-26 16:36:53] -rw------- 1 boincer umatlas 912085821 Nov 26 16:35 HITS.47556161._001271.pool.root.1
[2025-11-26 16:36:53] -rw------- 1 boincer umatlas      1064 Nov 26 16:36 memory_monitor_summary.json
[2025-11-26 16:36:53] -rw------- 1 boincer umatlas   1516240 Nov 26 16:36 agis_ddmendpoints.agis.ALL.json
[2025-11-26 16:36:53] -rw------- 1 boincer umatlas   1983579 Nov 26 16:36 log.47556161._001271.job.log.tgz.1
[2025-11-26 16:36:53] -rw------- 1 boincer umatlas      8657 Nov 26 16:36 heartbeat.json
[2025-11-26 16:36:53] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 16:36 boinc_mmap_file
[2025-11-26 16:36:53] -rw-r--r-- 1 boincer umatlas        29 Nov 26 16:36 wrapper_checkpoint.txt
[2025-11-26 16:36:53] -rw------- 1 boincer umatlas        95 Nov 26 16:36 pilot_heartbeat.json
[2025-11-26 16:36:53] -rw------- 1 boincer umatlas      4746 Nov 26 16:36 pilotlog.txt
[2025-11-26 16:36:53] -rw------- 1 boincer umatlas   6281423 Nov 26 16:36 log.47556161._001271.job.log.1
[2025-11-26 16:36:53] -rw------- 1 boincer umatlas       353 Nov 26 16:36 output.list
[2025-11-26 16:36:53] -rw-r--r-- 1 boincer umatlas       620 Nov 26 16:36 runtime_log
[2025-11-26 16:36:53] -rw------- 1 boincer umatlas   8284160 Nov 26 16:36 result.tar.gz
[2025-11-26 16:36:53] -rw------- 1 boincer umatlas       668 Nov 26 16:36 Vs2LDmM85h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9QJKDm6doR8n.diag
[2025-11-26 16:36:53] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 16:36 runtime_log.err
[2025-11-26 16:36:53] -rw-r--r-- 1 boincer umatlas     21386 Nov 26 16:36 stderr.txt
[2025-11-26 16:36:53] HITS file was successfully produced:
[2025-11-26 16:36:53] -rw------- 1 boincer umatlas 912085821 Nov 26 16:35 shared/HITS.pool.root.1
[2025-11-26 16:36:53]  *** Contents of shared directory: ***
[2025-11-26 16:36:53] total 1299572
[2025-11-26 16:36:53] -rw-r--r-- 2 boincer umatlas 409768421 Nov 26 03:55 ATLAS.root_0
[2025-11-26 16:36:53] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 03:55 start_atlas.sh
[2025-11-26 16:36:53] -rw-r--r-- 2 boincer umatlas    590109 Nov 26 03:55 input.tar.gz
[2025-11-26 16:36:53] -rw------- 1 boincer umatlas 912085821 Nov 26 16:35 HITS.pool.root.1
[2025-11-26 16:36:53] -rw------- 1 boincer umatlas   8284160 Nov 26 16:36 result.tar.gz
16:36:55 (19085): run_atlas exited; CPU time 346341.905517
16:36:55 (19085): called boinc_finish(0)

</stderr_txt>
]]>

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