Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:48:35 (14194): wrapper (7.7.26015): starting
03:48:35 (14194): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 03:48:35] Arguments: --nthreads 12
[2025-11-26 03:48:35] Threads: 12
[2025-11-26 03:48:35] Checking for CVMFS
[2025-11-26 03:48:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 03:48:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 03:48:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 03:48:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 03:48:35] 2.11.2.0 3081 287415 98496 153315 2 81 18645541 20275200 1 130560 1 129522055 99.965 16857255 14352 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 03:48:35] CVMFS is ok
[2025-11-26 03:48:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 03:48:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 03:48:35] Further information can be found at the LHC@home message board.
[2025-11-26 03:48:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 03:48:35] Checking for apptainer binary...
[2025-11-26 03:48:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 03:48:35] Running /usr/bin/apptainer --version
[2025-11-26 03:48:35] apptainer version 1.3.2-1.el7
[2025-11-26 03:48:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 03:48:36] c-205-29.aglt2.org
[2025-11-26 03:48:36] apptainer works
[2025-11-26 03:48:36] Set ATHENA_PROC_NUMBER=12
[2025-11-26 03:48:36] Set ATHENA_CORE_NUMBER=12
[2025-11-26 03:48:36] Starting ATLAS job with PandaID=6896766927
[2025-11-26 03:48:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 10:56:40]  *** The last 200 lines of the pilot log: ***
[2025-11-26 10:56:40] 2025-11-26 15:55:54,925 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 10:56:40] 2025-11-26 15:55:55,173 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 10:56:40] 2025-11-26 15:55:55,177 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0
[2025-11-26 10:56:40] 2025-11-26 15:55:55,180 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896766927/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 10:56:40] 2025-11-26 15:55:55,180 | INFO     | extracted standard info from prmon json
[2025-11-26 10:56:40] 2025-11-26 15:55:55,181 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 10:56:40] 2025-11-26 15:55:55,181 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 10:56:40] 2025-11-26 15:55:55,188 | INFO     | fitting pss+swap vs Time
[2025-11-26 10:56:40] 2025-11-26 15:55:55,189 | INFO     | sum of square deviations: 22973421444.24755
[2025-11-26 10:56:40] 2025-11-26 15:55:55,193 | INFO     | sum of deviations: 355737647900.5609
[2025-11-26 10:56:40] 2025-11-26 15:55:55,193 | INFO     | mean x: 1764159740.7523808
[2025-11-26 10:56:40] 2025-11-26 15:55:55,193 | INFO     | mean y: 3414540.188095238
[2025-11-26 10:56:40] 2025-11-26 15:55:55,193 | INFO     | intersect: -27314154948.498505
[2025-11-26 10:56:40] 2025-11-26 15:55:55,194 | INFO     | chi2: 6.408172554069807
[2025-11-26 10:56:40] 2025-11-26 15:55:55,194 | INFO     | sum of square deviations: 22162703688.925472
[2025-11-26 10:56:40] 2025-11-26 15:55:55,198 | INFO     | sum of deviations: 521928195976.0118
[2025-11-26 10:56:40] 2025-11-26 15:55:55,198 | INFO     | mean x: 1764159588.2554216
[2025-11-26 10:56:40] 2025-11-26 15:55:55,198 | INFO     | mean y: 3445764.2168674697
[2025-11-26 10:56:40] 2025-11-26 15:55:55,198 | INFO     | intersect: -41542235856.3895
[2025-11-26 10:56:40] 2025-11-26 15:55:55,199 | INFO     | chi2: 3.126618224403495
[2025-11-26 10:56:40] 2025-11-26 15:55:55,199 | INFO     | current chi2=3.126618224403495 (change=51.20889461040198 %)
[2025-11-26 10:56:40] 2025-11-26 15:55:55,199 | INFO     | sum of square deviations: 21371288621.0951
[2025-11-26 10:56:40] 2025-11-26 15:55:55,203 | INFO     | sum of deviations: 572124429993.7578
[2025-11-26 10:56:40] 2025-11-26 15:55:55,203 | INFO     | mean x: 1764159435.7585366
[2025-11-26 10:56:40] 2025-11-26 15:55:55,203 | INFO     | mean y: 3455391.9975609756
[2025-11-26 10:56:40] 2025-11-26 15:55:55,203 | INFO     | intersect: -47224333699.07237
[2025-11-26 10:56:40] 2025-11-26 15:55:55,204 | INFO     | chi2: 2.590470003888968
[2025-11-26 10:56:40] 2025-11-26 15:55:55,204 | INFO     | current chi2=2.590470003888968 (change=17.14786334736518 %)
[2025-11-26 10:56:40] 2025-11-26 15:55:55,204 | INFO     | right removable region: 409
[2025-11-26 10:56:40] 2025-11-26 15:55:55,204 | INFO     | sum of square deviations: 22162639028.925465
[2025-11-26 10:56:40] 2025-11-26 15:55:55,208 | INFO     | sum of deviations: 213139514154.96417
[2025-11-26 10:56:40] 2025-11-26 15:55:55,208 | INFO     | mean x: 1764159893.2554216
[2025-11-26 10:56:40] 2025-11-26 15:55:55,208 | INFO     | mean y: 3441285.3493975904
[2025-11-26 10:56:40] 2025-11-26 15:55:55,209 | INFO     | intersect: -16962597012.228048
[2025-11-26 10:56:40] 2025-11-26 15:55:55,209 | INFO     | chi2: 3.9904946991219292
[2025-11-26 10:56:40] 2025-11-26 15:55:55,209 | INFO     | current chi2=3.9904946991219292 (change=37.72803922722742 %)
[2025-11-26 10:56:40] 2025-11-26 15:55:55,210 | INFO     | sum of square deviations: 21371209686.119446
[2025-11-26 10:56:40] 2025-11-26 15:55:55,213 | INFO     | sum of deviations: 181037877281.6122
[2025-11-26 10:56:40] 2025-11-26 15:55:55,213 | INFO     | mean x: 1764160045.7536585
[2025-11-26 10:56:40] 2025-11-26 15:55:55,214 | INFO     | mean y: 3447464.758536585
[2025-11-26 10:56:40] 2025-11-26 15:55:55,214 | INFO     | intersect: -14940947099.659159
[2025-11-26 10:56:40] 2025-11-26 15:55:55,214 | INFO     | chi2: 3.9375608376279967
[2025-11-26 10:56:40] 2025-11-26 15:55:55,214 | INFO     | current chi2=3.9375608376279967 (change=1.3264987297334372 %)
[2025-11-26 10:56:40] 2025-11-26 15:55:55,214 | INFO     | left removable region: 20
[2025-11-26 10:56:40] 2025-11-26 15:55:55,215 | INFO     | sum of square deviations: 18252770824.29307
[2025-11-26 10:56:40] 2025-11-26 15:55:55,218 | INFO     | sum of deviations: 355889041092.1287
[2025-11-26 10:56:40] 2025-11-26 15:55:55,218 | INFO     | mean x: 1764160015.2570693
[2025-11-26 10:56:40] 2025-11-26 15:55:55,218 | INFO     | mean y: 3497805.498714653
[2025-11-26 10:56:40] 2025-11-26 15:55:55,218 | INFO     | intersect: -34393757395.19106
[2025-11-26 10:56:40] 2025-11-26 15:55:55,219 | INFO     | chi2: 0.06151807867418973
[2025-11-26 10:56:40] 2025-11-26 15:55:55,219 | INFO     | current memory leak: 19.50 B/s (using 389 data points, chi2=0.06)
[2025-11-26 10:56:40] 2025-11-26 15:55:55,219 | INFO     | could have reported an average CPU frequency of 2389 MHz (18 samples)
[2025-11-26 10:56:40] 2025-11-26 15:55:55,220 | INFO     | ..............................
[2025-11-26 10:56:40] 2025-11-26 15:55:55,220 | INFO     | . Timing measurements:
[2025-11-26 10:56:40] 2025-11-26 15:55:55,220 | INFO     | . get job = 0 s
[2025-11-26 10:56:40] 2025-11-26 15:55:55,220 | INFO     | . initial setup = 2 s
[2025-11-26 10:56:40] 2025-11-26 15:55:55,220 | INFO     | . payload setup = 7 s
[2025-11-26 10:56:40] 2025-11-26 15:55:55,220 | INFO     | . stage-in = 0 s
[2025-11-26 10:56:40] 2025-11-26 15:55:55,220 | INFO     | . payload execution = 25583 s
[2025-11-26 10:56:40] 2025-11-26 15:55:55,220 | INFO     | . stage-out = 3 s
[2025-11-26 10:56:40] 2025-11-26 15:55:55,220 | INFO     | . log creation = 0 s
[2025-11-26 10:56:40] 2025-11-26 15:55:55,221 | INFO     | ..............................
[2025-11-26 10:56:40] 2025-11-26 15:55:55,301 | INFO     | time since job start (25623s) is within the limit (172800.0s)
[2025-11-26 10:56:40] 2025-11-26 15:55:55,526 | INFO     | 
[2025-11-26 10:56:40] 2025-11-26 15:55:55,526 | INFO     | job summary report
[2025-11-26 10:56:40] 2025-11-26 15:55:55,526 | INFO     | --------------------------------------------------
[2025-11-26 10:56:40] 2025-11-26 15:55:55,526 | INFO     | PanDA job id: 6896766927
[2025-11-26 10:56:40] 2025-11-26 15:55:55,527 | INFO     | task id: 47556185
[2025-11-26 10:56:40] 2025-11-26 15:55:55,527 | INFO     | errors: (none)
[2025-11-26 10:56:40] 2025-11-26 15:55:55,527 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 10:56:40] 2025-11-26 15:55:55,527 | INFO     | pilot state: finished 
[2025-11-26 10:56:40] 2025-11-26 15:55:55,527 | INFO     | transexitcode: 0
[2025-11-26 10:56:40] 2025-11-26 15:55:55,527 | INFO     | exeerrorcode: 0
[2025-11-26 10:56:40] 2025-11-26 15:55:55,528 | INFO     | exeerrordiag: 
[2025-11-26 10:56:40] 2025-11-26 15:55:55,528 | INFO     | exitcode: 0
[2025-11-26 10:56:40] 2025-11-26 15:55:55,528 | INFO     | exitmsg: OK
[2025-11-26 10:56:40] 2025-11-26 15:55:55,528 | INFO     | cpuconsumptiontime: 293463 s
[2025-11-26 10:56:40] 2025-11-26 15:55:55,528 | INFO     | nevents: 1000
[2025-11-26 10:56:40] 2025-11-26 15:55:55,528 | INFO     | neventsw: 0
[2025-11-26 10:56:40] 2025-11-26 15:55:55,529 | INFO     | pid: 24406
[2025-11-26 10:56:40] 2025-11-26 15:55:55,529 | INFO     | pgrp: 24406
[2025-11-26 10:56:40] 2025-11-26 15:55:55,529 | INFO     | corecount: 12
[2025-11-26 10:56:40] 2025-11-26 15:55:55,529 | INFO     | event service: False
[2025-11-26 10:56:40] 2025-11-26 15:55:55,529 | INFO     | sizes: {0: 2284313, 5: 2284575, 11: 2284631, 25593: 2321811, 25598: 2330805, 25600: 2330861, 25607: 2331235}
[2025-11-26 10:56:40] 2025-11-26 15:55:55,529 | INFO     | --------------------------------------------------
[2025-11-26 10:56:40] 2025-11-26 15:55:55,530 | INFO     | 
[2025-11-26 10:56:40] 2025-11-26 15:55:55,530 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 10:56:40] 2025-11-26 15:55:55,557 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 10:56:40] 2025-11-26 15:55:55,557 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 10:56:40] 2025-11-26 15:55:55,557 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 10:56:40] 2025-11-26 15:55:55,558 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 10:56:40] 2025-11-26 15:55:55,558 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 10:56:40] 2025-11-26 15:55:55,558 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 10:56:40] 2025-11-26 15:55:55,558 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 10:56:40] 2025-11-26 15:55:55,558 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 10:56:40] 2025-11-26 15:55:55,558 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 10:56:40] 2025-11-26 15:55:55,558 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 10:56:40] 2025-11-26 15:55:55,558 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 10:56:40] 2025-11-26 15:55:55,558 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 10:56:40] 2025-11-26 15:55:55,559 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 10:56:40] 2025-11-26 15:55:55,559 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 10:56:40] 2025-11-26 15:55:55,559 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 10:56:40] 2025-11-26 15:55:55,559 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 10:56:40] 2025-11-26 15:55:55,559 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 10:56:40] 2025-11-26 15:55:55,559 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 10:56:40] 2025-11-26 15:55:55,559 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 10:56:40] 2025-11-26 15:55:55,559 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 10:56:40] 2025-11-26 15:55:55,560 | INFO     | job 6896766927 has completed (purged errors)
[2025-11-26 10:56:40] 2025-11-26 15:55:55,560 | INFO     | overall cleanup function is called
[2025-11-26 10:56:40] 2025-11-26 15:55:56,575 | INFO     | --- collectZombieJob: --- 10, [24406]
[2025-11-26 10:56:40] 2025-11-26 15:55:56,575 | INFO     | zombie collector waiting for pid 24406
[2025-11-26 10:56:40] 2025-11-26 15:55:56,575 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 10:56:40] 2025-11-26 15:55:56,575 | INFO     | collected zombie processes
[2025-11-26 10:56:40] 2025-11-26 15:55:56,575 | INFO     | will attempt to kill all subprocesses of pid=24406
[2025-11-26 10:56:40] 2025-11-26 15:55:56,668 | INFO     | process IDs to be killed: [24406] (in reverse order)
[2025-11-26 10:56:40] 2025-11-26 15:55:56,718 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 10:56:40] 2025-11-26 15:55:56,718 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 10:56:40] 2025-11-26 15:55:56,722 | INFO     | did not find any defunct processes belonging to 24406
[2025-11-26 10:56:40] 2025-11-26 15:55:56,725 | INFO     | did not find any defunct processes belonging to 24406
[2025-11-26 10:56:40] 2025-11-26 15:55:56,727 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 10:56:40] 2025-11-26 15:55:56,727 | INFO     | ready for new job
[2025-11-26 10:56:40] 2025-11-26 15:55:56,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 10:56:40] 2025-11-26 15:55:56,730 | INFO     | ***************************************
[2025-11-26 10:56:40] 2025-11-26 15:55:56,730 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 10:56:40] 2025-11-26 15:55:56,730 | INFO     | ***************************************
[2025-11-26 10:56:40] 2025-11-26 15:55:56,730 | INFO     | 
[2025-11-26 10:56:40] 2025-11-26 15:55:56,731 | INFO     | architecture information:
[2025-11-26 10:56:40] 2025-11-26 15:55:56,731 | INFO     | executing command: cat /etc/os-release
[2025-11-26 10:56:40] 2025-11-26 15:55:56,748 | INFO     | cat /etc/os-release:
[2025-11-26 10:56:40] NAME="CentOS Linux"
[2025-11-26 10:56:40] VERSION="7 (Core)"
[2025-11-26 10:56:40] ID="centos"
[2025-11-26 10:56:40] ID_LIKE="rhel fedora"
[2025-11-26 10:56:40] VERSION_ID="7"
[2025-11-26 10:56:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 10:56:40] ANSI_COLOR="0;31"
[2025-11-26 10:56:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 10:56:40] HOME_URL="https://www.centos.org/"
[2025-11-26 10:56:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 10:56:40] 
[2025-11-26 10:56:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 10:56:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 10:56:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 10:56:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 10:56:40] 
[2025-11-26 10:56:40] 2025-11-26 15:55:56,748 | INFO     | ***************************************
[2025-11-26 10:56:40] 2025-11-26 15:55:57,251 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 10:56:40] 2025-11-26 15:55:57,269 | INFO     | sufficient remaining disk space (28259123200 B)
[2025-11-26 10:56:40] 2025-11-26 15:55:57,269 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 10:56:40] 2025-11-26 15:55:57,270 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 10:56:40] 2025-11-26 15:55:57,270 | INFO     | update_server=False
[2025-11-26 10:56:40] 2025-11-26 15:55:57,270 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 10:56:40] 2025-11-26 15:55:57,270 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:56:40] 2025-11-26 15:55:57,271 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 10:56:40] 2025-11-26 15:55:57,271 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 10:56:40] 2025-11-26 15:55:57,271 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 10:56:40] 2025-11-26 15:55:57,271 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 10:56:40] 2025-11-26 15:55:57,436 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 10:56:40] 2025-11-26 15:55:57,437 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 10:56:40] 2025-11-26 15:55:57,437 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:56:40] 2025-11-26 15:55:57,437 | INFO     | will abort loop
[2025-11-26 10:56:40] 2025-11-26 15:55:57,470 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 10:56:40] 2025-11-26 15:55:57,688 | INFO     | all job control threads have been joined
[2025-11-26 10:56:40] 2025-11-26 15:55:57,792 | INFO     | all data control threads have been joined
[2025-11-26 10:56:40] 2025-11-26 15:55:57,878 | INFO     | all payload control threads have been joined
[2025-11-26 10:56:40] 2025-11-26 15:55:58,273 | INFO     | [job] queue monitor thread has finished
[2025-11-26 10:56:40] 2025-11-26 15:55:58,276 | INFO     | [job] retrieve thread has finished
[2025-11-26 10:56:40] 2025-11-26 15:55:58,303 | INFO     | [job] validate thread has finished
[2025-11-26 10:56:40] 2025-11-26 15:55:58,443 | INFO     | [job] job monitor thread has finished
[2025-11-26 10:56:40] 2025-11-26 15:55:58,532 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 10:56:40] 2025-11-26 15:55:58,533 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 10:56:40] 2025-11-26 15:55:58,689 | INFO     | [job] control thread has finished
[2025-11-26 10:56:40] 2025-11-26 15:55:58,797 | INFO     | [data] control thread has finished
[2025-11-26 10:56:40] 2025-11-26 15:55:58,884 | INFO     | [payload] control thread has finished
[2025-11-26 10:56:40] 2025-11-26 15:55:58,988 | INFO     | [data] copytool_in thread has finished
[2025-11-26 10:56:40] 2025-11-26 15:55:59,136 | INFO     | [payload] validate_post thread has finished
[2025-11-26 10:56:40] 2025-11-26 15:55:59,391 | INFO     | [payload] failed_post thread has finished
[2025-11-26 10:56:40] 2025-11-26 15:55:59,476 | INFO     | [data] copytool_out thread has finished
[2025-11-26 10:56:40] 2025-11-26 15:55:59,535 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 10:56:40] 2025-11-26 15:55:59,540 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 10:56:40] 2025-11-26 15:55:59,649 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 10:56:40] 2025-11-26 15:56:03,546 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 10:56:40] 2025-11-26 15:56:33,535 | INFO     | [monitor] cgroup control has ended
[2025-11-26 10:56:40] 2025-11-26 15:56:34,923 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140311796127552)>', '<ExcThread(monitor, started 140310608869120)>']
[2025-11-26 10:56:40] 2025-11-26 15:56:35,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 10:56:40] 2025-11-26 15:56:35,450 | INFO     | [monitor] control thread has ended
[2025-11-26 10:56:40] 2025-11-26 15:56:39,942 | INFO     | all workflow threads have been joined
[2025-11-26 10:56:40] 2025-11-26 15:56:39,943 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 10:56:40] 2025-11-26 15:56:39,947 | INFO     | traces error code: 0
[2025-11-26 10:56:40] 2025-11-26 15:56:39,948 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 10:56:40] 2025-11-26 15:56:40,029 [wrapper] ==== pilot stdout END ====
[2025-11-26 10:56:40] 2025-11-26 15:56:40,033 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 10:56:40] 2025-11-26 15:56:40,037 [wrapper] pilotpid: 17892
[2025-11-26 10:56:40] 2025-11-26 15:56:40,041 [wrapper] Pilot exit status: 0
[2025-11-26 10:56:40] 2025-11-26 15:56:40,054 [wrapper] pandaids: 6896766927
[2025-11-26 10:56:40] 2025-11-26 15:56:40,100 [wrapper] cleanup supervisor_pilot 23392 17893
[2025-11-26 10:56:40] 2025-11-26 15:56:40,104 [wrapper] Test setup, not cleaning
[2025-11-26 10:56:40] 2025-11-26 15:56:40,109 [wrapper] apfmon messages muted
[2025-11-26 10:56:40] 2025-11-26 15:56:40,113 [wrapper] ==== wrapper stdout END ====
[2025-11-26 10:56:40] 2025-11-26 15:56:40,117 [wrapper] ==== wrapper stderr END ====
[2025-11-26 10:56:40]  *** Error codes and diagnostics ***
[2025-11-26 10:56:40]     "exeErrorCode": 0,
[2025-11-26 10:56:40]     "exeErrorDiag": "",
[2025-11-26 10:56:40]     "pilotErrorCode": 0,
[2025-11-26 10:56:40]     "pilotErrorDiag": "",
[2025-11-26 10:56:40]  *** Listing of results directory ***
[2025-11-26 10:56:40] total 1303112
[2025-11-26 10:56:40] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 05:51 pilot3.tar.gz
[2025-11-26 10:56:40] -rwx------ 1 boincer umatlas     36292 Nov 25 06:05 runpilot2-wrapper.sh
[2025-11-26 10:56:40] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 06:05 queuedata.json
[2025-11-26 10:56:40] -rw-r--r-- 1 boincer umatlas       100 Nov 26 03:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 10:56:40] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 03:48 run_atlas
[2025-11-26 10:56:40] -rw-r--r-- 1 boincer umatlas       105 Nov 26 03:48 job.xml
[2025-11-26 10:56:40] -rw-r--r-- 2 boincer umatlas 408139275 Nov 26 03:48 EVNT.47483658._004289.pool.root.1
[2025-11-26 10:56:40] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 03:48 start_atlas.sh
[2025-11-26 10:56:40] drwxrwx--x 2 boincer umatlas      4096 Nov 26 03:48 shared
[2025-11-26 10:56:40] -rw-r--r-- 2 boincer umatlas    590094 Nov 26 03:48 input.tar.gz
[2025-11-26 10:56:40] -rw-r--r-- 1 boincer umatlas         0 Nov 26 03:48 boinc_lockfile
[2025-11-26 10:56:40] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 03:48 pandaJob.out
[2025-11-26 10:56:40] -rw------- 1 boincer umatlas        57 Nov 26 03:48 setup.sh.local
[2025-11-26 10:56:40] -rw------- 1 boincer umatlas    991877 Nov 26 03:48 agis_schedconf.cvmfs.json
[2025-11-26 10:56:40] drwx------ 5 boincer umatlas      4096 Nov 26 03:48 pilot3
[2025-11-26 10:56:40] -rw-r--r-- 1 boincer umatlas       533 Nov 26 10:46 boinc_task_state.xml
[2025-11-26 10:56:40] -rw-r--r-- 1 boincer umatlas      5955 Nov 26 10:54 init_data.xml
[2025-11-26 10:56:40] -rw------- 1 boincer umatlas        95 Nov 26 10:55 pilot_heartbeat.json
[2025-11-26 10:56:40] -rw------- 1 boincer umatlas 910791983 Nov 26 10:55 HITS.47556185._000525.pool.root.1
[2025-11-26 10:56:40] -rw------- 1 boincer umatlas      1064 Nov 26 10:55 memory_monitor_summary.json
[2025-11-26 10:56:40] -rw------- 1 boincer umatlas   1516240 Nov 26 10:55 agis_ddmendpoints.agis.ALL.json
[2025-11-26 10:56:40] -rw------- 1 boincer umatlas   2181623 Nov 26 10:55 log.47556185._000525.job.log.tgz.1
[2025-11-26 10:56:40] -rw------- 1 boincer umatlas      8675 Nov 26 10:55 heartbeat.json
[2025-11-26 10:56:40] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 10:56 boinc_mmap_file
[2025-11-26 10:56:40] -rw-r--r-- 1 boincer umatlas        29 Nov 26 10:56 wrapper_checkpoint.txt
[2025-11-26 10:56:40] -rw------- 1 boincer umatlas      4738 Nov 26 10:56 pilotlog.txt
[2025-11-26 10:56:40] -rw------- 1 boincer umatlas   3584605 Nov 26 10:56 log.47556185._000525.job.log.1
[2025-11-26 10:56:40] -rw------- 1 boincer umatlas       353 Nov 26 10:56 output.list
[2025-11-26 10:56:40] -rw-r--r-- 1 boincer umatlas       620 Nov 26 10:56 runtime_log
[2025-11-26 10:56:40] -rw------- 1 boincer umatlas   5785600 Nov 26 10:56 result.tar.gz
[2025-11-26 10:56:40] -rw-r--r-- 1 boincer umatlas      9345 Nov 26 10:56 runtime_log.err
[2025-11-26 10:56:40] -rw------- 1 boincer umatlas       670 Nov 26 10:56 2ZtKDmP25h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrKMKDmLOCERo.diag
[2025-11-26 10:56:40] -rw-r--r-- 1 boincer umatlas     21222 Nov 26 10:56 stderr.txt
[2025-11-26 10:56:40] HITS file was successfully produced:
[2025-11-26 10:56:40] -rw------- 1 boincer umatlas 910791983 Nov 26 10:55 shared/HITS.pool.root.1
[2025-11-26 10:56:40]  *** Contents of shared directory: ***
[2025-11-26 10:56:40] total 1294276
[2025-11-26 10:56:40] -rw-r--r-- 2 boincer umatlas 408139275 Nov 26 03:48 ATLAS.root_0
[2025-11-26 10:56:40] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 03:48 start_atlas.sh
[2025-11-26 10:56:40] -rw-r--r-- 2 boincer umatlas    590094 Nov 26 03:48 input.tar.gz
[2025-11-26 10:56:40] -rw------- 1 boincer umatlas 910791983 Nov 26 10:55 HITS.pool.root.1
[2025-11-26 10:56:40] -rw------- 1 boincer umatlas   5785600 Nov 26 10:56 result.tar.gz
10:56:41 (14194): run_atlas exited; CPU time 286892.732744
10:56:41 (14194): called boinc_finish(0)

</stderr_txt>
]]>

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