Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
08:48:12 (1581607): wrapper (7.7.26015): starting
08:48:12 (1581607): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 08:48:12] Arguments: --nthreads 8
[2025-11-26 08:48:12] Threads: 8
[2025-11-26 08:48:12] Checking for CVMFS
[2025-11-26 08:48:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 08:48:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 08:48:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 08:48:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 08:48:12] 2.13.3.0 1542564 0 39964 153315 3 88 3225428 4096001 726 130560 0 96738 99.982 2848 1763 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2025-11-26 08:48:12] CVMFS is ok
[2025-11-26 08:48:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 08:48:12] Checking for apptainer binary...
[2025-11-26 08:48:12] apptainer is not installed, using version from CVMFS
[2025-11-26 08:48:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 08:48:12] senture-c621e-l
[2025-11-26 08:48:12] apptainer works
[2025-11-26 08:48:12] Set ATHENA_PROC_NUMBER=8
[2025-11-26 08:48:12] Set ATHENA_CORE_NUMBER=8
[2025-11-26 08:48:12] Starting ATLAS job with PandaID=6896922908
[2025-11-26 08:48:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 16:50:15]  *** The last 200 lines of the pilot log: ***
[2025-11-26 16:50:15] 2025-11-26 16:49:31,588 | INFO     | monitor loop #2061: job 0:6896922908 is in state 'finished'
[2025-11-26 16:50:15] 2025-11-26 16:49:31,589 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:50:15] 2025-11-26 16:49:32,258 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 16:50:15] 2025-11-26 16:49:32,260 | INFO     | found 32 cores (32 cores per socket, 1 socket) HT, CPU MHz: 2600.0039999999976
[2025-11-26 16:50:15] 2025-11-26 16:49:32,266 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6896922908/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 16:50:15] 2025-11-26 16:49:32,266 | INFO     | extracted standard info from prmon json
[2025-11-26 16:50:15] 2025-11-26 16:49:32,266 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 16:50:15] 2025-11-26 16:49:32,266 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 16:50:15] 2025-11-26 16:49:32,270 | INFO     | fitting pss+swap vs Time
[2025-11-26 16:50:15] 2025-11-26 16:49:32,271 | INFO     | sum of square deviations: 32814200953.26014
[2025-11-26 16:50:15] 2025-11-26 16:49:32,273 | INFO     | sum of deviations: 392246242804.8093
[2025-11-26 16:50:15] 2025-11-26 16:49:32,273 | INFO     | mean x: 1764161319.07611
[2025-11-26 16:50:15] 2025-11-26 16:49:32,273 | INFO     | mean y: 2857971.505285412
[2025-11-26 16:50:15] 2025-11-26 16:49:32,273 | INFO     | intersect: -21085135306.003754
[2025-11-26 16:50:15] 2025-11-26 16:49:32,274 | INFO     | chi2: 4.100033649372987
[2025-11-26 16:50:15] 2025-11-26 16:49:32,274 | INFO     | sum of square deviations: 31784555418.23073
[2025-11-26 16:50:15] 2025-11-26 16:49:32,277 | INFO     | sum of deviations: 506400154540.2689
[2025-11-26 16:50:15] 2025-11-26 16:49:32,277 | INFO     | mean x: 1764161166.5769231
[2025-11-26 16:50:15] 2025-11-26 16:49:32,277 | INFO     | mean y: 2874836.784188034
[2025-11-26 16:50:15] 2025-11-26 16:49:32,277 | INFO     | intersect: -28104219178.94907
[2025-11-26 16:50:15] 2025-11-26 16:49:32,277 | INFO     | chi2: 1.9770507053335233
[2025-11-26 16:50:15] 2025-11-26 16:49:32,277 | INFO     | current chi2=1.9770507053335233 (change=51.779646841779666 %)
[2025-11-26 16:50:15] 2025-11-26 16:49:32,277 | INFO     | sum of square deviations: 30776677733.20084
[2025-11-26 16:50:15] 2025-11-26 16:49:32,280 | INFO     | sum of deviations: 498550280080.0415
[2025-11-26 16:50:15] 2025-11-26 16:49:32,280 | INFO     | mean x: 1764161014.0777538
[2025-11-26 16:50:15] 2025-11-26 16:49:32,280 | INFO     | mean y: 2873645.6933045355
[2025-11-26 16:50:15] 2025-11-26 16:49:32,280 | INFO     | intersect: -28574706276.97504
[2025-11-26 16:50:15] 2025-11-26 16:49:32,280 | INFO     | chi2: 1.968979646389242
[2025-11-26 16:50:15] 2025-11-26 16:49:32,280 | INFO     | current chi2=1.968979646389242 (change=0.4082373265646633 %)
[2025-11-26 16:50:15] 2025-11-26 16:49:32,280 | INFO     | right removable region: 462
[2025-11-26 16:50:15] 2025-11-26 16:49:32,281 | INFO     | sum of square deviations: 31784533458.230732
[2025-11-26 16:50:15] 2025-11-26 16:49:32,283 | INFO     | sum of deviations: 281999392284.8844
[2025-11-26 16:50:15] 2025-11-26 16:49:32,284 | INFO     | mean x: 1764161471.5769231
[2025-11-26 16:50:15] 2025-11-26 16:49:32,284 | INFO     | mean y: 2874244.7115384615
[2025-11-26 16:50:15] 2025-11-26 16:49:32,284 | INFO     | intersect: -15649155492.672323
[2025-11-26 16:50:15] 2025-11-26 16:49:32,284 | INFO     | chi2: 2.2801544787874666
[2025-11-26 16:50:15] 2025-11-26 16:49:32,284 | INFO     | current chi2=2.2801544787874666 (change=44.38693255270801 %)
[2025-11-26 16:50:15] 2025-11-26 16:49:32,284 | INFO     | sum of square deviations: 30776633813.200836
[2025-11-26 16:50:15] 2025-11-26 16:49:32,287 | INFO     | sum of deviations: 253638958448.12524
[2025-11-26 16:50:15] 2025-11-26 16:49:32,287 | INFO     | mean x: 1764161624.0777538
[2025-11-26 16:50:15] 2025-11-26 16:49:32,287 | INFO     | mean y: 2878532.274298056
[2025-11-26 16:50:15] 2025-11-26 16:49:32,287 | INFO     | intersect: -14536077208.665382
[2025-11-26 16:50:15] 2025-11-26 16:49:32,287 | INFO     | chi2: 2.2363398633734017
[2025-11-26 16:50:15] 2025-11-26 16:49:32,287 | INFO     | current chi2=2.2363398633734017 (change=1.921563465180852 %)
[2025-11-26 16:50:15] 2025-11-26 16:49:32,287 | INFO     | left removable region: 20
[2025-11-26 16:50:15] 2025-11-26 16:49:32,287 | INFO     | sum of square deviations: 26775960067.56789
[2025-11-26 16:50:15] 2025-11-26 16:49:32,290 | INFO     | sum of deviations: 317343570115.9482
[2025-11-26 16:50:15] 2025-11-26 16:49:32,290 | INFO     | mean x: 1764161593.581448
[2025-11-26 16:50:15] 2025-11-26 16:49:32,290 | INFO     | mean y: 2901577.237556561
[2025-11-26 16:50:15] 2025-11-26 16:49:32,290 | INFO     | intersect: -20905605044.218163
[2025-11-26 16:50:15] 2025-11-26 16:49:32,290 | INFO     | chi2: 0.06292538227239995
[2025-11-26 16:50:15] 2025-11-26 16:49:32,290 | INFO     | current memory leak: 11.85 B/s (using 442 data points, chi2=0.06)
[2025-11-26 16:50:15] 2025-11-26 16:49:32,290 | INFO     | could have reported an average CPU frequency of 2600 MHz (19 samples)
[2025-11-26 16:50:15] 2025-11-26 16:49:32,290 | INFO     | ..............................
[2025-11-26 16:50:15] 2025-11-26 16:49:32,291 | INFO     | . Timing measurements:
[2025-11-26 16:50:15] 2025-11-26 16:49:32,291 | INFO     | . get job = 0 s
[2025-11-26 16:50:15] 2025-11-26 16:49:32,291 | INFO     | . initial setup = 1 s
[2025-11-26 16:50:15] 2025-11-26 16:49:32,291 | INFO     | . payload setup = 4 s
[2025-11-26 16:50:15] 2025-11-26 16:49:32,291 | INFO     | . stage-in = 0 s
[2025-11-26 16:50:15] 2025-11-26 16:49:32,291 | INFO     | . payload execution = 28840 s
[2025-11-26 16:50:15] 2025-11-26 16:49:32,291 | INFO     | . stage-out = 1 s
[2025-11-26 16:50:15] 2025-11-26 16:49:32,291 | INFO     | . log creation = 0 s
[2025-11-26 16:50:15] 2025-11-26 16:49:32,291 | INFO     | ..............................
[2025-11-26 16:50:15] 2025-11-26 16:49:32,334 | INFO     | 
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | job summary report
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | --------------------------------------------------
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | PanDA job id: 6896922908
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | task id: 47556161
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | errors: (none)
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | pilot state: finished 
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | transexitcode: 0
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | exeerrorcode: 0
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | exeerrordiag: 
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | exitcode: 0
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | exitmsg: OK
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | cpuconsumptiontime: 225638 s
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | nevents: 1000
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | neventsw: 0
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | pid: 1665496
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | pgrp: 1665496
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | corecount: 8
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | event service: False
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | sizes: {0: 2284265, 4: 2284527, 11: 2284555, 28849: 2322378, 28851: 2331386, 28852: 2331442, 28858: 2331816}
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | --------------------------------------------------
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | 
[2025-11-26 16:50:15] 2025-11-26 16:49:32,335 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2025-11-26 16:50:15] 2025-11-26 16:49:32,355 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 16:50:15] 2025-11-26 16:49:32,355 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 16:50:15] 2025-11-26 16:49:32,355 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 16:50:15] 2025-11-26 16:49:32,355 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 16:50:15] 2025-11-26 16:49:32,356 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 16:50:15] 2025-11-26 16:49:32,356 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 16:50:15] 2025-11-26 16:49:32,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 16:50:15] 2025-11-26 16:49:32,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 16:50:15] 2025-11-26 16:49:32,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 16:50:15] 2025-11-26 16:49:32,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 16:50:15] 2025-11-26 16:49:32,356 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 16:50:15] 2025-11-26 16:49:32,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 16:50:15] 2025-11-26 16:49:32,356 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 16:50:15] 2025-11-26 16:49:32,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 16:50:15] 2025-11-26 16:49:32,356 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 16:50:15] 2025-11-26 16:49:32,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 16:50:15] 2025-11-26 16:49:32,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 16:50:15] 2025-11-26 16:49:32,356 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 16:50:15] 2025-11-26 16:49:32,356 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 16:50:15] 2025-11-26 16:49:32,356 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 16:50:15] 2025-11-26 16:49:32,356 | INFO     | job 6896922908 has completed (purged errors)
[2025-11-26 16:50:15] 2025-11-26 16:49:32,356 | INFO     | overall cleanup function is called
[2025-11-26 16:50:15] 2025-11-26 16:49:33,369 | INFO     | --- collectZombieJob: --- 10, [1665496]
[2025-11-26 16:50:15] 2025-11-26 16:49:33,369 | INFO     | zombie collector waiting for pid 1665496
[2025-11-26 16:50:15] 2025-11-26 16:49:33,369 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 16:50:15] 2025-11-26 16:49:33,369 | INFO     | collected zombie processes
[2025-11-26 16:50:15] 2025-11-26 16:49:33,369 | INFO     | will attempt to kill all subprocesses of pid=1665496
[2025-11-26 16:50:15] 2025-11-26 16:49:33,486 | INFO     | process IDs to be killed: [1665496] (in reverse order)
[2025-11-26 16:50:15] 2025-11-26 16:49:33,549 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 16:50:15] 2025-11-26 16:49:33,549 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 16:50:15] 2025-11-26 16:49:33,553 | INFO     | did not find any defunct processes belonging to 1665496
[2025-11-26 16:50:15] 2025-11-26 16:49:33,556 | INFO     | did not find any defunct processes belonging to 1665496
[2025-11-26 16:50:15] 2025-11-26 16:49:33,559 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 16:50:15] 2025-11-26 16:49:33,559 | INFO     | ready for new job
[2025-11-26 16:50:15] 2025-11-26 16:49:33,559 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 16:50:15] 2025-11-26 16:49:33,561 | INFO     | ***************************************
[2025-11-26 16:50:15] 2025-11-26 16:49:33,562 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 16:50:15] 2025-11-26 16:49:33,562 | INFO     | ***************************************
[2025-11-26 16:50:15] 2025-11-26 16:49:33,562 | INFO     | 
[2025-11-26 16:50:15] 2025-11-26 16:49:33,564 | INFO     | pilot is running in a VM
[2025-11-26 16:50:15] 2025-11-26 16:49:33,564 | INFO     | architecture information:
[2025-11-26 16:50:15] 2025-11-26 16:49:33,564 | INFO     | executing command: cat /etc/os-release
[2025-11-26 16:50:15] 2025-11-26 16:49:33,578 | INFO     | cat /etc/os-release:
[2025-11-26 16:50:15] NAME="CentOS Linux"
[2025-11-26 16:50:15] VERSION="7 (Core)"
[2025-11-26 16:50:15] ID="centos"
[2025-11-26 16:50:15] ID_LIKE="rhel fedora"
[2025-11-26 16:50:15] VERSION_ID="7"
[2025-11-26 16:50:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 16:50:15] ANSI_COLOR="0;31"
[2025-11-26 16:50:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 16:50:15] HOME_URL="https://www.centos.org/"
[2025-11-26 16:50:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 16:50:15] 
[2025-11-26 16:50:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 16:50:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 16:50:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 16:50:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 16:50:15] 
[2025-11-26 16:50:15] 2025-11-26 16:49:33,578 | INFO     | ***************************************
[2025-11-26 16:50:15] 2025-11-26 16:49:34,081 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2025-11-26 16:50:15] 2025-11-26 16:49:34,097 | INFO     | sufficient remaining disk space (111621963776 B)
[2025-11-26 16:50:15] 2025-11-26 16:49:34,097 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 16:50:15] 2025-11-26 16:49:34,097 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 16:50:15] 2025-11-26 16:49:34,097 | INFO     | update_server=False
[2025-11-26 16:50:15] 2025-11-26 16:49:34,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 16:50:15] 2025-11-26 16:49:34,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:50:15] 2025-11-26 16:49:34,098 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 16:50:15] 2025-11-26 16:49:34,240 | INFO     | all payload control threads have been joined
[2025-11-26 16:50:15] 2025-11-26 16:49:35,017 | INFO     | all data control threads have been joined
[2025-11-26 16:50:15] 2025-11-26 16:49:35,097 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:50:15] 2025-11-26 16:49:35,097 | INFO     | aborting loop
[2025-11-26 16:50:15] 2025-11-26 16:49:35,102 | INFO     | [job] retrieve thread has finished
[2025-11-26 16:50:15] 2025-11-26 16:49:35,103 | INFO     | [job] queue monitor thread has finished
[2025-11-26 16:50:15] 2025-11-26 16:49:35,245 | INFO     | [payload] control thread has finished
[2025-11-26 16:50:15] 2025-11-26 16:49:35,316 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 16:50:15] 2025-11-26 16:49:35,588 | INFO     | [payload] failed_post thread has finished
[2025-11-26 16:50:15] 2025-11-26 16:49:35,629 | INFO     | all job control threads have been joined
[2025-11-26 16:50:15] 2025-11-26 16:49:35,717 | INFO     | [job] validate thread has finished
[2025-11-26 16:50:15] 2025-11-26 16:49:35,857 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 16:50:15] 2025-11-26 16:49:35,963 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 16:50:15] 2025-11-26 16:49:36,023 | INFO     | [data] control thread has finished
[2025-11-26 16:50:15] 2025-11-26 16:49:36,063 | INFO     | [payload] validate_post thread has finished
[2025-11-26 16:50:15] 2025-11-26 16:49:36,091 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 16:50:15] 2025-11-26 16:49:36,103 | INFO     | [job] job monitor thread has finished
[2025-11-26 16:50:15] 2025-11-26 16:49:36,103 | INFO     | [data] copytool_out thread has finished
[2025-11-26 16:50:15] 2025-11-26 16:49:36,295 | INFO     | [data] copytool_in thread has finished
[2025-11-26 16:50:15] 2025-11-26 16:49:36,634 | INFO     | [job] control thread has finished
[2025-11-26 16:50:15] 2025-11-26 16:49:37,436 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 16:50:15] 2025-11-26 16:49:41,443 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 16:50:15] 2025-11-26 16:50:04,190 | INFO     | PID=1596080 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 16:50:15] 2025-11-26 16:50:04,190 | INFO     | .. there are 2 such processes running
[2025-11-26 16:50:15] 2025-11-26 16:50:04,190 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 16:50:15] 2025-11-26 16:50:04,191 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 16:50:15] 2025-11-26 16:50:04,191 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 16:50:15] 2025-11-26 16:50:08,213 | INFO     | [monitor] cgroup control has ended
[2025-11-26 16:50:15] 2025-11-26 16:50:09,854 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138994905970496)>', '<ExcThread(monitor, started 138994352363264)>']
[2025-11-26 16:50:15] 2025-11-26 16:50:10,222 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 16:50:15] 2025-11-26 16:50:10,222 | INFO     | [monitor] control thread has ended
[2025-11-26 16:50:15] 2025-11-26 16:50:14,879 | INFO     | all workflow threads have been joined
[2025-11-26 16:50:15] 2025-11-26 16:50:14,879 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 16:50:15] 2025-11-26 16:50:14,879 | INFO     | traces error code: 0
[2025-11-26 16:50:15] 2025-11-26 16:50:14,879 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 16:50:15] 2025-11-26 16:50:14,968 [wrapper] ==== pilot stdout END ====
[2025-11-26 16:50:15] 2025-11-26 16:50:14,971 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 16:50:15] 2025-11-26 16:50:14,973 [wrapper] pilotpid: 1596080
[2025-11-26 16:50:15] 2025-11-26 16:50:14,975 [wrapper] Pilot exit status: 0
[2025-11-26 16:50:15] 2025-11-26 16:50:14,983 [wrapper] pandaids: 6896922908
[2025-11-26 16:50:15] 2025-11-26 16:50:15,013 [wrapper] cleanup supervisor_pilot 1991034 1596083
[2025-11-26 16:50:15] 2025-11-26 16:50:15,016 [wrapper] Test setup, not cleaning
[2025-11-26 16:50:15] 2025-11-26 16:50:15,018 [wrapper] apfmon messages muted
[2025-11-26 16:50:15] 2025-11-26 16:50:15,021 [wrapper] ==== wrapper stdout END ====
[2025-11-26 16:50:15] 2025-11-26 16:50:15,023 [wrapper] ==== wrapper stderr END ====
[2025-11-26 16:50:15]  *** Error codes and diagnostics ***
[2025-11-26 16:50:15]     "exeErrorCode": 0,
[2025-11-26 16:50:15]     "exeErrorDiag": "",
[2025-11-26 16:50:15]     "pilotErrorCode": 0,
[2025-11-26 16:50:15]     "pilotErrorDiag": "",
[2025-11-26 16:50:15]  *** Listing of results directory ***
[2025-11-26 16:50:15] total 1320560
[2025-11-26 16:50:15] -rw-r--r-- 1 boinc boinc    576529 Nov 25 10:51 pilot3.tar.gz
[2025-11-26 16:50:15] -rw-r--r-- 1 boinc boinc      5112 Nov 25 11:09 queuedata.json
[2025-11-26 16:50:15] -rwx------ 1 boinc boinc     36292 Nov 25 11:11 runpilot2-wrapper.sh
[2025-11-26 16:50:15] -rw-r--r-- 1 boinc boinc       100 Nov 26 08:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 16:50:15] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 08:48 run_atlas
[2025-11-26 16:50:15] -rw-r--r-- 1 boinc boinc       105 Nov 26 08:48 job.xml
[2025-11-26 16:50:15] -rw-r--r-- 2 boinc boinc 412584352 Nov 26 08:48 EVNT.47483658._002143.pool.root.1
[2025-11-26 16:50:15] -rw-r--r-- 2 boinc boinc    590105 Nov 26 08:48 input.tar.gz
[2025-11-26 16:50:15] -rw-r--r-- 2 boinc boinc     15847 Nov 26 08:48 start_atlas.sh
[2025-11-26 16:50:15] drwxrwx--x 2 boinc boinc      4096 Nov 26 08:48 shared
[2025-11-26 16:50:15] -rw-r--r-- 1 boinc boinc         0 Nov 26 08:48 boinc_setup_complete
[2025-11-26 16:50:15] -rw-r--r-- 1 boinc boinc      6663 Nov 26 08:48 init_data.xml
[2025-11-26 16:50:15] -rw-r--r-- 1 boinc boinc         0 Nov 26 08:48 boinc_lockfile
[2025-11-26 16:50:15] -rw-r--r-- 1 boinc boinc      2782 Nov 26 08:48 pandaJob.out
[2025-11-26 16:50:15] -rw------- 1 boinc boinc        50 Nov 26 08:48 setup.sh.local
[2025-11-26 16:50:15] -rw------- 1 boinc boinc    991877 Nov 26 08:48 agis_schedconf.cvmfs.json
[2025-11-26 16:50:15] drwx------ 5 boinc boinc      4096 Nov 26 08:48 pilot3
[2025-11-26 16:50:15] -rw-r--r-- 1 boinc boinc       532 Nov 26 16:43 boinc_task_state.xml
[2025-11-26 16:50:15] -rw------- 1 boinc boinc 924150512 Nov 26 16:48 HITS.47556161._001261.pool.root.1
[2025-11-26 16:50:15] -rw------- 1 boinc boinc      1040 Nov 26 16:49 memory_monitor_summary.json
[2025-11-26 16:50:15] -rw------- 1 boinc boinc   1516240 Nov 26 16:49 agis_ddmendpoints.agis.ALL.json
[2025-11-26 16:50:15] -rw------- 1 boinc boinc   1752436 Nov 26 16:49 log.47556161._001261.job.log.tgz.1
[2025-11-26 16:50:15] -rw------- 1 boinc boinc      8604 Nov 26 16:49 heartbeat.json
[2025-11-26 16:50:15] -rw-r--r-- 1 boinc boinc      8192 Nov 26 16:49 boinc_mmap_file
[2025-11-26 16:50:15] -rw-r--r-- 1 boinc boinc        29 Nov 26 16:49 wrapper_checkpoint.txt
[2025-11-26 16:50:15] -rw------- 1 boinc boinc        95 Nov 26 16:50 pilot_heartbeat.json
[2025-11-26 16:50:15] -rw------- 1 boinc boinc      4893 Nov 26 16:50 pilotlog.txt
[2025-11-26 16:50:15] -rw------- 1 boinc boinc   4046956 Nov 26 16:50 log.47556161._001261.job.log.1
[2025-11-26 16:50:15] -rw------- 1 boinc boinc       353 Nov 26 16:50 output.list
[2025-11-26 16:50:15] -rw-r--r-- 1 boinc boinc       620 Nov 26 16:50 runtime_log
[2025-11-26 16:50:15] -rw------- 1 boinc boinc   5816320 Nov 26 16:50 result.tar.gz
[2025-11-26 16:50:15] -rw------- 1 boinc boinc       657 Nov 26 16:50 RW1LDmM85h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8QJKDmYuupLm.diag
[2025-11-26 16:50:15] -rw-r--r-- 1 boinc boinc      9425 Nov 26 16:50 runtime_log.err
[2025-11-26 16:50:15] -rw-r--r-- 1 boinc boinc     21013 Nov 26 16:50 stderr.txt
[2025-11-26 16:50:15] HITS file was successfully produced:
[2025-11-26 16:50:15] -rw------- 1 boinc boinc 924150512 Nov 26 16:48 shared/HITS.pool.root.1
[2025-11-26 16:50:15]  *** Contents of shared directory: ***
[2025-11-26 16:50:15] total 1311692
[2025-11-26 16:50:15] -rw-r--r-- 2 boinc boinc 412584352 Nov 26 08:48 ATLAS.root_0
[2025-11-26 16:50:15] -rw-r--r-- 2 boinc boinc    590105 Nov 26 08:48 input.tar.gz
[2025-11-26 16:50:15] -rw-r--r-- 2 boinc boinc     15847 Nov 26 08:48 start_atlas.sh
[2025-11-26 16:50:15] -rw------- 1 boinc boinc 924150512 Nov 26 16:48 HITS.pool.root.1
[2025-11-26 16:50:15] -rw------- 1 boinc boinc   5816320 Nov 26 16:50 result.tar.gz
16:50:16 (1581607): run_atlas exited; CPU time 226191.328154
16:50:16 (1581607): called boinc_finish(0)

</stderr_txt>
]]>

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