Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
08:47:14 (1542334): wrapper (7.7.26015): starting
08:47:14 (1542334): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 08:47:14] Arguments: --nthreads 8
[2025-11-26 08:47:14] Threads: 8
[2025-11-26 08:47:14] Checking for CVMFS
[2025-11-26 08:47:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 08:47:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 08:47:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 08:47:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 08:47:20] 2.13.3.0 1542564 0 25580 153315 3 1 3215508 4096001 0 130560 0 0 0.000 1291 915 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2025-11-26 08:47:20] CVMFS is ok
[2025-11-26 08:47:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 08:47:20] Checking for apptainer binary...
[2025-11-26 08:47:20] apptainer is not installed, using version from CVMFS
[2025-11-26 08:47:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 08:47:20] senture-c621e-l
[2025-11-26 08:47:20] apptainer works
[2025-11-26 08:47:20] Set ATHENA_PROC_NUMBER=8
[2025-11-26 08:47:20] Set ATHENA_CORE_NUMBER=8
[2025-11-26 08:47:20] Starting ATLAS job with PandaID=6896296791
[2025-11-26 08:47:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 16:45:27]  *** The last 200 lines of the pilot log: ***
[2025-11-26 16:45:27] 2025-11-26 16:44:19,806 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:45:27] 2025-11-26 16:44:20,087 | INFO     | time since job start (28605s) is within the limit (172800.0s)
[2025-11-26 16:45:27] 2025-11-26 16:44:21,981 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 16:45:27] 2025-11-26 16:44:21,983 | INFO     | found 32 cores (32 cores per socket, 1 socket) HT, CPU MHz: 2600.0039999999976
[2025-11-26 16:45:27] 2025-11-26 16:44:21,990 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6896296791/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 16:45:27] 2025-11-26 16:44:21,990 | INFO     | extracted standard info from prmon json
[2025-11-26 16:45:27] 2025-11-26 16:44:21,990 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 16:45:27] 2025-11-26 16:44:21,990 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 16:45:27] 2025-11-26 16:44:21,994 | INFO     | fitting pss+swap vs Time
[2025-11-26 16:45:27] 2025-11-26 16:44:21,995 | INFO     | sum of square deviations: 31988713356.251495
[2025-11-26 16:45:27] 2025-11-26 16:44:21,997 | INFO     | sum of deviations: 323621898846.0683
[2025-11-26 16:45:27] 2025-11-26 16:44:21,997 | INFO     | mean x: 1764161153.151386
[2025-11-26 16:45:27] 2025-11-26 16:44:21,998 | INFO     | mean y: 2840937.1257995735
[2025-11-26 16:45:27] 2025-11-26 16:44:21,998 | INFO     | intersect: -17844740986.382446
[2025-11-26 16:45:27] 2025-11-26 16:44:21,998 | INFO     | chi2: 5.588504626026394
[2025-11-26 16:45:27] 2025-11-26 16:44:21,998 | INFO     | sum of square deviations: 30976511381.13571
[2025-11-26 16:45:27] 2025-11-26 16:44:22,001 | INFO     | sum of deviations: 480882486240.4785
[2025-11-26 16:45:27] 2025-11-26 16:44:22,001 | INFO     | mean x: 1764161000.6530173
[2025-11-26 16:45:27] 2025-11-26 16:44:22,001 | INFO     | mean y: 2864607.4439655175
[2025-11-26 16:45:27] 2025-11-26 16:44:22,001 | INFO     | intersect: -27384148658.32843
[2025-11-26 16:45:27] 2025-11-26 16:44:22,001 | INFO     | chi2: 2.2103297528393338
[2025-11-26 16:45:27] 2025-11-26 16:44:22,001 | INFO     | current chi2=2.2103297528393338 (change=60.44863696550343 %)
[2025-11-26 16:45:27] 2025-11-26 16:44:22,002 | INFO     | sum of square deviations: 29985863145.324562
[2025-11-26 16:45:27] 2025-11-26 16:44:22,004 | INFO     | sum of deviations: 505358076393.3869
[2025-11-26 16:45:27] 2025-11-26 16:44:22,004 | INFO     | mean x: 1764160848.1525054
[2025-11-26 16:45:27] 2025-11-26 16:44:22,004 | INFO     | mean y: 2868354.880174292
[2025-11-26 16:45:27] 2025-11-26 16:44:22,004 | INFO     | intersect: -29728906526.840553
[2025-11-26 16:45:27] 2025-11-26 16:44:22,004 | INFO     | chi2: 1.9949407240904582
[2025-11-26 16:45:27] 2025-11-26 16:44:22,004 | INFO     | current chi2=1.9949407240904582 (change=9.744655903590505 %)
[2025-11-26 16:45:27] 2025-11-26 16:44:22,004 | INFO     | right removable region: 458
[2025-11-26 16:45:27] 2025-11-26 16:44:22,005 | INFO     | sum of square deviations: 30976468071.13571
[2025-11-26 16:45:27] 2025-11-26 16:44:22,007 | INFO     | sum of deviations: 214752172613.0819
[2025-11-26 16:45:27] 2025-11-26 16:44:22,007 | INFO     | mean x: 1764161305.6530173
[2025-11-26 16:45:27] 2025-11-26 16:44:22,007 | INFO     | mean y: 2857282.0129310344
[2025-11-26 16:45:27] 2025-11-26 16:44:22,007 | INFO     | intersect: -12227635631.4752
[2025-11-26 16:45:27] 2025-11-26 16:44:22,008 | INFO     | chi2: 3.7505357991697945
[2025-11-26 16:45:27] 2025-11-26 16:44:22,008 | INFO     | current chi2=3.7505357991697945 (change=32.88838338429459 %)
[2025-11-26 16:45:27] 2025-11-26 16:44:22,008 | INFO     | sum of square deviations: 29985804586.01742
[2025-11-26 16:45:27] 2025-11-26 16:44:22,010 | INFO     | sum of deviations: 188316249155.18073
[2025-11-26 16:45:27] 2025-11-26 16:44:22,010 | INFO     | mean x: 1764161458.154684
[2025-11-26 16:45:27] 2025-11-26 16:44:22,010 | INFO     | mean y: 2861348.7298474945
[2025-11-26 16:45:27] 2025-11-26 16:44:22,010 | INFO     | intersect: -11076390093.425583
[2025-11-26 16:45:27] 2025-11-26 16:44:22,011 | INFO     | chi2: 3.7120452359134988
[2025-11-26 16:45:27] 2025-11-26 16:44:22,011 | INFO     | current chi2=3.7120452359134988 (change=1.0262683871679315 %)
[2025-11-26 16:45:27] 2025-11-26 16:44:22,011 | INFO     | left removable region: 20
[2025-11-26 16:45:27] 2025-11-26 16:44:22,011 | INFO     | sum of square deviations: 26055511478.943024
[2025-11-26 16:45:27] 2025-11-26 16:44:22,013 | INFO     | sum of deviations: 325131883613.8766
[2025-11-26 16:45:27] 2025-11-26 16:44:22,013 | INFO     | mean x: 1764161427.655251
[2025-11-26 16:45:27] 2025-11-26 16:44:22,013 | INFO     | mean y: 2896603.5753424657
[2025-11-26 16:45:27] 2025-11-26 16:44:22,013 | INFO     | intersect: -22011068788.58535
[2025-11-26 16:45:27] 2025-11-26 16:44:22,014 | INFO     | chi2: 0.06074942136020546
[2025-11-26 16:45:27] 2025-11-26 16:44:22,014 | INFO     | current memory leak: 12.48 B/s (using 438 data points, chi2=0.06)
[2025-11-26 16:45:27] 2025-11-26 16:44:22,014 | INFO     | could have reported an average CPU frequency of 2600 MHz (19 samples)
[2025-11-26 16:45:27] 2025-11-26 16:44:22,014 | INFO     | ..............................
[2025-11-26 16:45:27] 2025-11-26 16:44:22,014 | INFO     | . Timing measurements:
[2025-11-26 16:45:27] 2025-11-26 16:44:22,014 | INFO     | . get job = 0 s
[2025-11-26 16:45:27] 2025-11-26 16:44:22,014 | INFO     | . initial setup = 2 s
[2025-11-26 16:45:27] 2025-11-26 16:44:22,014 | INFO     | . payload setup = 6 s
[2025-11-26 16:45:27] 2025-11-26 16:44:22,015 | INFO     | . stage-in = 0 s
[2025-11-26 16:45:27] 2025-11-26 16:44:22,015 | INFO     | . payload execution = 28569 s
[2025-11-26 16:45:27] 2025-11-26 16:44:22,015 | INFO     | . stage-out = 1 s
[2025-11-26 16:45:27] 2025-11-26 16:44:22,015 | INFO     | . log creation = 0 s
[2025-11-26 16:45:27] 2025-11-26 16:44:22,015 | INFO     | ..............................
[2025-11-26 16:45:27] 2025-11-26 16:44:22,061 | INFO     | 
[2025-11-26 16:45:27] 2025-11-26 16:44:22,061 | INFO     | job summary report
[2025-11-26 16:45:27] 2025-11-26 16:44:22,061 | INFO     | --------------------------------------------------
[2025-11-26 16:45:27] 2025-11-26 16:44:22,061 | INFO     | PanDA job id: 6896296791
[2025-11-26 16:45:27] 2025-11-26 16:44:22,061 | INFO     | task id: 47556149
[2025-11-26 16:45:27] 2025-11-26 16:44:22,061 | INFO     | errors: (none)
[2025-11-26 16:45:27] 2025-11-26 16:44:22,061 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 16:45:27] 2025-11-26 16:44:22,061 | INFO     | pilot state: finished 
[2025-11-26 16:45:27] 2025-11-26 16:44:22,062 | INFO     | transexitcode: 0
[2025-11-26 16:45:27] 2025-11-26 16:44:22,062 | INFO     | exeerrorcode: 0
[2025-11-26 16:45:27] 2025-11-26 16:44:22,062 | INFO     | exeerrordiag: 
[2025-11-26 16:45:27] 2025-11-26 16:44:22,062 | INFO     | exitcode: 0
[2025-11-26 16:45:27] 2025-11-26 16:44:22,062 | INFO     | exitmsg: OK
[2025-11-26 16:45:27] 2025-11-26 16:44:22,062 | INFO     | cpuconsumptiontime: 222509 s
[2025-11-26 16:45:27] 2025-11-26 16:44:22,062 | INFO     | nevents: 1000
[2025-11-26 16:45:27] 2025-11-26 16:44:22,062 | INFO     | neventsw: 0
[2025-11-26 16:45:27] 2025-11-26 16:44:22,062 | INFO     | pid: 1554024
[2025-11-26 16:45:27] 2025-11-26 16:44:22,062 | INFO     | pgrp: 1554024
[2025-11-26 16:45:27] 2025-11-26 16:44:22,062 | INFO     | corecount: 8
[2025-11-26 16:45:27] 2025-11-26 16:44:22,062 | INFO     | event service: False
[2025-11-26 16:45:27] 2025-11-26 16:44:22,062 | INFO     | sizes: {0: 2283487, 1: 2284350, 5: 2284612, 11: 2284668, 28579: 2322302, 28583: 2331310, 28586: 2331522, 28592: 2331768}
[2025-11-26 16:45:27] 2025-11-26 16:44:22,062 | INFO     | --------------------------------------------------
[2025-11-26 16:45:27] 2025-11-26 16:44:22,062 | INFO     | 
[2025-11-26 16:45:27] 2025-11-26 16:44:22,062 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-26 16:45:27] 2025-11-26 16:44:22,080 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 16:45:27] 2025-11-26 16:44:22,080 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 16:45:27] 2025-11-26 16:44:22,080 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 16:45:27] 2025-11-26 16:44:22,080 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 16:45:27] 2025-11-26 16:44:22,081 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 16:45:27] 2025-11-26 16:44:22,081 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 16:45:27] 2025-11-26 16:44:22,081 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 16:45:27] 2025-11-26 16:44:22,081 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 16:45:27] 2025-11-26 16:44:22,081 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 16:45:27] 2025-11-26 16:44:22,081 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 16:45:27] 2025-11-26 16:44:22,081 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 16:45:27] 2025-11-26 16:44:22,081 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 16:45:27] 2025-11-26 16:44:22,081 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 16:45:27] 2025-11-26 16:44:22,081 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 16:45:27] 2025-11-26 16:44:22,081 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 16:45:27] 2025-11-26 16:44:22,081 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 16:45:27] 2025-11-26 16:44:22,081 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 16:45:27] 2025-11-26 16:44:22,081 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 16:45:27] 2025-11-26 16:44:22,081 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 16:45:27] 2025-11-26 16:44:22,081 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 16:45:27] 2025-11-26 16:44:22,081 | INFO     | job 6896296791 has completed (purged errors)
[2025-11-26 16:45:27] 2025-11-26 16:44:22,081 | INFO     | overall cleanup function is called
[2025-11-26 16:45:27] 2025-11-26 16:44:23,094 | INFO     | --- collectZombieJob: --- 10, [1554024]
[2025-11-26 16:45:27] 2025-11-26 16:44:23,094 | INFO     | zombie collector waiting for pid 1554024
[2025-11-26 16:45:27] 2025-11-26 16:44:23,094 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 16:45:27] 2025-11-26 16:44:23,094 | INFO     | collected zombie processes
[2025-11-26 16:45:27] 2025-11-26 16:44:23,094 | INFO     | will attempt to kill all subprocesses of pid=1554024
[2025-11-26 16:45:27] 2025-11-26 16:44:23,284 | INFO     | process IDs to be killed: [1554024] (in reverse order)
[2025-11-26 16:45:27] 2025-11-26 16:44:23,353 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 16:45:27] 2025-11-26 16:44:23,354 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 16:45:27] 2025-11-26 16:44:23,359 | INFO     | did not find any defunct processes belonging to 1554024
[2025-11-26 16:45:27] 2025-11-26 16:44:23,363 | INFO     | did not find any defunct processes belonging to 1554024
[2025-11-26 16:45:27] 2025-11-26 16:44:23,365 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 16:45:27] 2025-11-26 16:44:23,365 | INFO     | ready for new job
[2025-11-26 16:45:27] 2025-11-26 16:44:23,365 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 16:45:27] 2025-11-26 16:44:23,367 | INFO     | ***************************************
[2025-11-26 16:45:27] 2025-11-26 16:44:23,367 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 16:45:27] 2025-11-26 16:44:23,367 | INFO     | ***************************************
[2025-11-26 16:45:27] 2025-11-26 16:44:23,367 | INFO     | 
[2025-11-26 16:45:27] 2025-11-26 16:44:23,369 | INFO     | pilot is running in a VM
[2025-11-26 16:45:27] 2025-11-26 16:44:23,369 | INFO     | architecture information:
[2025-11-26 16:45:27] 2025-11-26 16:44:23,370 | INFO     | executing command: cat /etc/os-release
[2025-11-26 16:45:27] 2025-11-26 16:44:23,384 | INFO     | cat /etc/os-release:
[2025-11-26 16:45:27] NAME="CentOS Linux"
[2025-11-26 16:45:27] VERSION="7 (Core)"
[2025-11-26 16:45:27] ID="centos"
[2025-11-26 16:45:27] ID_LIKE="rhel fedora"
[2025-11-26 16:45:27] VERSION_ID="7"
[2025-11-26 16:45:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 16:45:27] ANSI_COLOR="0;31"
[2025-11-26 16:45:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 16:45:27] HOME_URL="https://www.centos.org/"
[2025-11-26 16:45:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 16:45:27] 
[2025-11-26 16:45:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 16:45:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 16:45:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 16:45:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 16:45:27] 
[2025-11-26 16:45:27] 2025-11-26 16:44:23,384 | INFO     | ***************************************
[2025-11-26 16:45:27] 2025-11-26 16:44:23,887 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-26 16:45:27] 2025-11-26 16:44:23,902 | INFO     | sufficient remaining disk space (105075703808 B)
[2025-11-26 16:45:27] 2025-11-26 16:44:23,902 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 16:45:27] 2025-11-26 16:44:23,902 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 16:45:27] 2025-11-26 16:44:23,902 | INFO     | update_server=False
[2025-11-26 16:45:27] 2025-11-26 16:44:23,902 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 16:45:27] 2025-11-26 16:44:23,903 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:45:27] 2025-11-26 16:44:23,903 | INFO     | aborting loop
[2025-11-26 16:45:27] 2025-11-26 16:44:23,903 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:45:27] 2025-11-26 16:44:23,982 | INFO     | all payload control threads have been joined
[2025-11-26 16:45:27] 2025-11-26 16:44:24,316 | INFO     | all data control threads have been joined
[2025-11-26 16:45:27] 2025-11-26 16:44:24,394 | INFO     | all job control threads have been joined
[2025-11-26 16:45:27] 2025-11-26 16:44:24,903 | INFO     | [job] retrieve thread has finished
[2025-11-26 16:45:27] 2025-11-26 16:44:24,908 | INFO     | [job] queue monitor thread has finished
[2025-11-26 16:45:27] 2025-11-26 16:44:24,908 | INFO     | [job] job monitor thread has finished
[2025-11-26 16:45:27] 2025-11-26 16:44:24,988 | INFO     | [payload] control thread has finished
[2025-11-26 16:45:27] 2025-11-26 16:44:25,131 | INFO     | [payload] failed_post thread has finished
[2025-11-26 16:45:27] 2025-11-26 16:44:25,198 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 16:45:27] 2025-11-26 16:44:25,210 | INFO     | [data] copytool_in thread has finished
[2025-11-26 16:45:27] 2025-11-26 16:44:25,321 | INFO     | [data] control thread has finished
[2025-11-26 16:45:27] 2025-11-26 16:44:25,383 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 16:45:27] 2025-11-26 16:44:25,400 | INFO     | [job] control thread has finished
[2025-11-26 16:45:27] 2025-11-26 16:44:25,512 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 16:45:27] 2025-11-26 16:44:25,687 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 16:45:27] 2025-11-26 16:44:25,753 | INFO     | [job] validate thread has finished
[2025-11-26 16:45:27] 2025-11-26 16:44:25,845 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 16:45:27] 2025-11-26 16:44:26,098 | INFO     | [payload] validate_post thread has finished
[2025-11-26 16:45:27] 2025-11-26 16:44:26,252 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 16:45:27] 2025-11-26 16:44:27,388 | INFO     | [data] copytool_out thread has finished
[2025-11-26 16:45:27] 2025-11-26 16:44:29,851 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 16:45:27] 2025-11-26 16:44:53,362 | INFO     | PID=1547164 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 16:45:27] 2025-11-26 16:44:53,362 | INFO     | .. there are 8 such processes running
[2025-11-26 16:45:27] 2025-11-26 16:44:53,362 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 16:45:27] 2025-11-26 16:44:53,362 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 16:45:27] 2025-11-26 16:44:53,362 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 16:45:27] 2025-11-26 16:45:22,113 | INFO     | [monitor] cgroup control has ended
[2025-11-26 16:45:27] 2025-11-26 16:45:22,534 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136517242132288)>', '<ExcThread(monitor, started 136516256913152)>']
[2025-11-26 16:45:27] 2025-11-26 16:45:23,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 16:45:27] 2025-11-26 16:45:23,514 | INFO     | [monitor] control thread has ended
[2025-11-26 16:45:27] 2025-11-26 16:45:27,559 | INFO     | all workflow threads have been joined
[2025-11-26 16:45:27] 2025-11-26 16:45:27,560 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 16:45:27] 2025-11-26 16:45:27,560 | INFO     | traces error code: 0
[2025-11-26 16:45:27] 2025-11-26 16:45:27,560 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 16:45:27] 2025-11-26 16:45:27,687 [wrapper] ==== pilot stdout END ====
[2025-11-26 16:45:27] 2025-11-26 16:45:27,690 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 16:45:27] 2025-11-26 16:45:27,692 [wrapper] pilotpid: 1547164
[2025-11-26 16:45:27] 2025-11-26 16:45:27,694 [wrapper] Pilot exit status: 0
[2025-11-26 16:45:27] 2025-11-26 16:45:27,702 [wrapper] pandaids: 6896296791
[2025-11-26 16:45:27] 2025-11-26 16:45:27,745 [wrapper] cleanup supervisor_pilot 1978115 1547165
[2025-11-26 16:45:27] 2025-11-26 16:45:27,747 [wrapper] Test setup, not cleaning
[2025-11-26 16:45:27] 2025-11-26 16:45:27,750 [wrapper] apfmon messages muted
[2025-11-26 16:45:27] 2025-11-26 16:45:27,752 [wrapper] ==== wrapper stdout END ====
[2025-11-26 16:45:27] 2025-11-26 16:45:27,754 [wrapper] ==== wrapper stderr END ====
[2025-11-26 16:45:27]  *** Error codes and diagnostics ***
[2025-11-26 16:45:27]     "exeErrorCode": 0,
[2025-11-26 16:45:27]     "exeErrorDiag": "",
[2025-11-26 16:45:27]     "pilotErrorCode": 0,
[2025-11-26 16:45:27]     "pilotErrorDiag": "",
[2025-11-26 16:45:27]  *** Listing of results directory ***
[2025-11-26 16:45:27] total 1308636
[2025-11-26 16:45:27] -rw-r--r-- 1 boinc boinc    576529 Nov 25 00:10 pilot3.tar.gz
[2025-11-26 16:45:27] -rw-r--r-- 1 boinc boinc      5112 Nov 25 00:21 queuedata.json
[2025-11-26 16:45:27] -rwx------ 1 boinc boinc     36292 Nov 25 00:25 runpilot2-wrapper.sh
[2025-11-26 16:45:27] -rw-r--r-- 1 boinc boinc       100 Nov 26 08:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 16:45:27] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 08:47 run_atlas
[2025-11-26 16:45:27] -rw-r--r-- 1 boinc boinc       105 Nov 26 08:47 job.xml
[2025-11-26 16:45:27] -rw-r--r-- 2 boinc boinc 407487610 Nov 26 08:47 EVNT.47483658._001452.pool.root.1
[2025-11-26 16:45:27] drwxrwx--x 2 boinc boinc      4096 Nov 26 08:47 shared
[2025-11-26 16:45:27] -rw-r--r-- 2 boinc boinc    590105 Nov 26 08:47 input.tar.gz
[2025-11-26 16:45:27] -rw-r--r-- 2 boinc boinc     15847 Nov 26 08:47 start_atlas.sh
[2025-11-26 16:45:27] -rw-r--r-- 1 boinc boinc         0 Nov 26 08:47 boinc_setup_complete
[2025-11-26 16:45:27] -rw-r--r-- 1 boinc boinc      6663 Nov 26 08:47 init_data.xml
[2025-11-26 16:45:27] -rw-r--r-- 1 boinc boinc         0 Nov 26 08:47 boinc_lockfile
[2025-11-26 16:45:27] -rw-r--r-- 1 boinc boinc      2786 Nov 26 08:47 pandaJob.out
[2025-11-26 16:45:27] -rw------- 1 boinc boinc        50 Nov 26 08:47 setup.sh.local
[2025-11-26 16:45:27] -rw------- 1 boinc boinc    991877 Nov 26 08:47 agis_schedconf.cvmfs.json
[2025-11-26 16:45:27] drwx------ 5 boinc boinc      4096 Nov 26 08:47 pilot3
[2025-11-26 16:45:27] -rw-r--r-- 1 boinc boinc       532 Nov 26 16:35 boinc_task_state.xml
[2025-11-26 16:45:27] -rw------- 1 boinc boinc 917101456 Nov 26 16:43 HITS.47556149._004387.pool.root.1
[2025-11-26 16:45:27] -rw------- 1 boinc boinc        95 Nov 26 16:43 pilot_heartbeat.json
[2025-11-26 16:45:27] -rw------- 1 boinc boinc      1034 Nov 26 16:44 memory_monitor_summary.json
[2025-11-26 16:45:27] -rw------- 1 boinc boinc   1516240 Nov 26 16:44 agis_ddmendpoints.agis.ALL.json
[2025-11-26 16:45:27] -rw------- 1 boinc boinc   1755994 Nov 26 16:44 log.47556149._004387.job.log.tgz.1
[2025-11-26 16:45:27] -rw------- 1 boinc boinc      8605 Nov 26 16:44 heartbeat.json
[2025-11-26 16:45:27] -rw-r--r-- 1 boinc boinc        29 Nov 26 16:45 wrapper_checkpoint.txt
[2025-11-26 16:45:27] -rw-r--r-- 1 boinc boinc      8192 Nov 26 16:45 boinc_mmap_file
[2025-11-26 16:45:27] -rw------- 1 boinc boinc      4893 Nov 26 16:45 pilotlog.txt
[2025-11-26 16:45:27] -rw------- 1 boinc boinc   4006603 Nov 26 16:45 log.47556149._004387.job.log.1
[2025-11-26 16:45:27] -rw------- 1 boinc boinc       353 Nov 26 16:45 output.list
[2025-11-26 16:45:27] -rw-r--r-- 1 boinc boinc       620 Nov 26 16:45 runtime_log
[2025-11-26 16:45:27] -rw------- 1 boinc boinc   5785600 Nov 26 16:45 result.tar.gz
[2025-11-26 16:45:27] -rw-r--r-- 1 boinc boinc      9425 Nov 26 16:45 runtime_log.err
[2025-11-26 16:45:27] -rw------- 1 boinc boinc       657 Nov 26 16:45 6j5LDm52vh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmP0LKDmFQUahn.diag
[2025-11-26 16:45:27] -rw-r--r-- 1 boinc boinc     21021 Nov 26 16:45 stderr.txt
[2025-11-26 16:45:27] HITS file was successfully produced:
[2025-11-26 16:45:27] -rw------- 1 boinc boinc 917101456 Nov 26 16:43 shared/HITS.pool.root.1
[2025-11-26 16:45:27]  *** Contents of shared directory: ***
[2025-11-26 16:45:27] total 1299804
[2025-11-26 16:45:27] -rw-r--r-- 2 boinc boinc 407487610 Nov 26 08:47 ATLAS.root_0
[2025-11-26 16:45:27] -rw-r--r-- 2 boinc boinc    590105 Nov 26 08:47 input.tar.gz
[2025-11-26 16:45:27] -rw-r--r-- 2 boinc boinc     15847 Nov 26 08:47 start_atlas.sh
[2025-11-26 16:45:27] -rw------- 1 boinc boinc 917101456 Nov 26 16:43 HITS.pool.root.1
[2025-11-26 16:45:27] -rw------- 1 boinc boinc   5785600 Nov 26 16:45 result.tar.gz
16:45:29 (1542334): run_atlas exited; CPU time 223012.824376
16:45:29 (1542334): called boinc_finish(0)

</stderr_txt>
]]>

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