Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:46:48 (1932289): wrapper (7.7.26015): starting
03:46:48 (1932289): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 03:46:48] Arguments: --nthreads 8
[2025-11-26 03:46:48] Threads: 8
[2025-11-26 03:46:48] Checking for CVMFS
[2025-11-26 03:46:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 03:46:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 03:46:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 03:46:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 03:46:49] 2.13.3.0 9735 29830 295888 153315 3 178 23990356 32935937 24451 16776704 0 134137360 99.752 87262452 32908 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 03:46:49] CVMFS is ok
[2025-11-26 03:46:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 03:46:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 03:46:49] Further information can be found at the LHC@home message board.
[2025-11-26 03:46:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 03:46:49] Checking for apptainer binary...
[2025-11-26 03:46:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 03:46:49] Running /usr/bin/apptainer --version
[2025-11-26 03:46:49] apptainer version 1.4.4-1.el9
[2025-11-26 03:46:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 03:46:50] c-8-15.aglt2.org
[2025-11-26 03:46:50] apptainer works
[2025-11-26 03:46:50] Set ATHENA_PROC_NUMBER=8
[2025-11-26 03:46:50] Set ATHENA_CORE_NUMBER=8
[2025-11-26 03:46:50] Starting ATLAS job with PandaID=6896922376
[2025-11-26 03:46:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 02:23:02]  *** The last 200 lines of the pilot log: ***
[2025-11-27 02:23:02] 2025-11-27 07:22:07,116 | INFO     | monitor loop #4834: job 0:6896922376 is in state 'finished'
[2025-11-27 02:23:02] 2025-11-27 07:22:07,116 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:23:02] 2025-11-27 07:22:09,281 | INFO     | PID=1941801 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 02:23:02] 2025-11-27 07:22:09,305 | INFO     | .. there are 42 such processes running
[2025-11-27 02:23:02] 2025-11-27 07:22:09,623 | INFO     | monitor loop #4835: job 0:6896922376 is in state 'finished'
[2025-11-27 02:23:02] 2025-11-27 07:22:09,623 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:23:02] 2025-11-27 07:22:10,307 | INFO     | time since job start (81285s) is within the limit (172800.0s)
[2025-11-27 02:23:02] 2025-11-27 07:22:12,130 | INFO     | monitor loop #4836: job 0:6896922376 is in state 'finished'
[2025-11-27 02:23:02] 2025-11-27 07:22:12,130 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:23:02] 2025-11-27 07:22:12,314 | INFO     | time since job start (81287s) is within the limit (172800.0s)
[2025-11-27 02:23:02] 2025-11-27 07:22:14,326 | INFO     | time since job start (81289s) is within the limit (172800.0s)
[2025-11-27 02:23:02] 2025-11-27 07:22:14,673 | INFO     | monitor loop #4837: job 0:6896922376 is in state 'finished'
[2025-11-27 02:23:02] 2025-11-27 07:22:14,673 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:23:02] 2025-11-27 07:22:16,357 | INFO     | time since job start (81291s) is within the limit (172800.0s)
[2025-11-27 02:23:02] 2025-11-27 07:22:17,178 | INFO     | monitor loop #4838: job 0:6896922376 is in state 'finished'
[2025-11-27 02:23:02] 2025-11-27 07:22:17,178 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:23:02] 2025-11-27 07:22:18,374 | INFO     | time since job start (81293s) is within the limit (172800.0s)
[2025-11-27 02:23:02] 2025-11-27 07:22:19,213 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 02:23:02] 2025-11-27 07:22:19,224 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.179074999999
[2025-11-27 02:23:02] 2025-11-27 07:22:19,237 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6896922376/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 02:23:02] 2025-11-27 07:22:19,238 | INFO     | extracted standard info from prmon json
[2025-11-27 02:23:02] 2025-11-27 07:22:19,238 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:23:02] 2025-11-27 07:22:19,238 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:23:02] 2025-11-27 07:22:19,295 | INFO     | fitting pss+swap vs Time
[2025-11-27 02:23:02] 2025-11-27 07:22:19,299 | INFO     | sum of square deviations: 731169002642.0903
[2025-11-27 02:23:02] 2025-11-27 07:22:19,510 | INFO     | sum of deviations: 3628960877260.7563
[2025-11-27 02:23:02] 2025-11-27 07:22:19,510 | INFO     | mean x: 1764187493.4552968
[2025-11-27 02:23:02] 2025-11-27 07:22:19,510 | INFO     | mean y: 2921685.701728024
[2025-11-27 02:23:02] 2025-11-27 07:22:19,510 | INFO     | intersect: -8753148895.473976
[2025-11-27 02:23:02] 2025-11-27 07:22:19,512 | INFO     | chi2: 18.430367828713702
[2025-11-27 02:23:02] 2025-11-27 07:22:19,514 | INFO     | sum of square deviations: 722960537173.9602
[2025-11-27 02:23:02] 2025-11-27 07:22:19,556 | INFO     | sum of deviations: 4086608932644.786
[2025-11-27 02:23:02] 2025-11-27 07:22:19,556 | INFO     | mean x: 1764187340.9607842
[2025-11-27 02:23:02] 2025-11-27 07:22:19,556 | INFO     | mean y: 2930186.322775264
[2025-11-27 02:23:02] 2025-11-27 07:22:19,556 | INFO     | intersect: -9969320546.215368
[2025-11-27 02:23:02] 2025-11-27 07:22:19,558 | INFO     | chi2: 15.080397321790498
[2025-11-27 02:23:02] 2025-11-27 07:22:19,558 | INFO     | current chi2=15.080397321790498 (change=18.176362718621913 %)
[2025-11-27 02:23:02] 2025-11-27 07:22:19,559 | INFO     | right removable region: 1325
[2025-11-27 02:23:02] 2025-11-27 07:22:19,560 | INFO     | sum of square deviations: 722959355603.9608
[2025-11-27 02:23:02] 2025-11-27 07:22:19,602 | INFO     | sum of deviations: 3086268836325.9795
[2025-11-27 02:23:02] 2025-11-27 07:22:19,602 | INFO     | mean x: 1764187645.9607842
[2025-11-27 02:23:02] 2025-11-27 07:22:19,602 | INFO     | mean y: 2931765.8650075416
[2025-11-27 02:23:02] 2025-11-27 07:22:19,602 | INFO     | intersect: -7528276331.734759
[2025-11-27 02:23:02] 2025-11-27 07:22:19,604 | INFO     | chi2: 14.3612857090977
[2025-11-27 02:23:02] 2025-11-27 07:22:19,604 | INFO     | current chi2=14.3612857090977 (change=22.07813841499436 %)
[2025-11-27 02:23:02] 2025-11-27 07:22:19,605 | INFO     | left removable region: 10
[2025-11-27 02:23:02] 2025-11-27 07:22:19,606 | INFO     | sum of square deviations: 705116400857.736
[2025-11-27 02:23:02] 2025-11-27 07:22:19,680 | INFO     | sum of deviations: 3313530739032.9854
[2025-11-27 02:23:02] 2025-11-27 07:22:19,684 | INFO     | mean x: 1764187615.4722433
[2025-11-27 02:23:02] 2025-11-27 07:22:19,684 | INFO     | mean y: 2947803.930798479
[2025-11-27 02:23:02] 2025-11-27 07:22:19,684 | INFO     | intersect: -8287442103.576128
[2025-11-27 02:23:02] 2025-11-27 07:22:19,686 | INFO     | chi2: 9.057735170710268
[2025-11-27 02:23:02] 2025-11-27 07:22:19,686 | INFO     | current memory leak: 4.70 B/s (using 1315 data points, chi2=9.06)
[2025-11-27 02:23:02] 2025-11-27 07:22:19,688 | INFO     | could have reported an average CPU frequency of 2600 MHz (48 samples)
[2025-11-27 02:23:02] 2025-11-27 07:22:19,692 | INFO     | ..............................
[2025-11-27 02:23:02] 2025-11-27 07:22:19,692 | INFO     | . Timing measurements:
[2025-11-27 02:23:02] 2025-11-27 07:22:19,692 | INFO     | . get job = 0 s
[2025-11-27 02:23:02] 2025-11-27 07:22:19,692 | INFO     | . initial setup = 3 s
[2025-11-27 02:23:02] 2025-11-27 07:22:19,692 | INFO     | . payload setup = 22 s
[2025-11-27 02:23:02] 2025-11-27 07:22:19,693 | INFO     | . stage-in = 0 s
[2025-11-27 02:23:02] 2025-11-27 07:22:19,693 | INFO     | . payload execution = 81183 s
[2025-11-27 02:23:02] 2025-11-27 07:22:19,693 | INFO     | . stage-out = 8 s
[2025-11-27 02:23:02] 2025-11-27 07:22:19,693 | INFO     | . log creation = 2 s
[2025-11-27 02:23:02] 2025-11-27 07:22:19,693 | INFO     | ..............................
[2025-11-27 02:23:02] 2025-11-27 07:22:20,215 | INFO     | 
[2025-11-27 02:23:02] 2025-11-27 07:22:20,215 | INFO     | job summary report
[2025-11-27 02:23:02] 2025-11-27 07:22:20,215 | INFO     | --------------------------------------------------
[2025-11-27 02:23:02] 2025-11-27 07:22:20,215 | INFO     | PanDA job id: 6896922376
[2025-11-27 02:23:02] 2025-11-27 07:22:20,215 | INFO     | task id: 47556173
[2025-11-27 02:23:02] 2025-11-27 07:22:20,215 | INFO     | errors: (none)
[2025-11-27 02:23:02] 2025-11-27 07:22:20,216 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 02:23:02] 2025-11-27 07:22:20,216 | INFO     | pilot state: finished 
[2025-11-27 02:23:02] 2025-11-27 07:22:20,216 | INFO     | transexitcode: 0
[2025-11-27 02:23:02] 2025-11-27 07:22:20,216 | INFO     | exeerrorcode: 0
[2025-11-27 02:23:02] 2025-11-27 07:22:20,216 | INFO     | exeerrordiag: 
[2025-11-27 02:23:02] 2025-11-27 07:22:20,216 | INFO     | exitcode: 0
[2025-11-27 02:23:02] 2025-11-27 07:22:20,216 | INFO     | exitmsg: OK
[2025-11-27 02:23:02] 2025-11-27 07:22:20,216 | INFO     | cpuconsumptiontime: 296717 s
[2025-11-27 02:23:02] 2025-11-27 07:22:20,216 | INFO     | nevents: 1000
[2025-11-27 02:23:02] 2025-11-27 07:22:20,216 | INFO     | neventsw: 0
[2025-11-27 02:23:02] 2025-11-27 07:22:20,217 | INFO     | pid: 1949055
[2025-11-27 02:23:02] 2025-11-27 07:22:20,217 | INFO     | pgrp: 1949055
[2025-11-27 02:23:02] 2025-11-27 07:22:20,217 | INFO     | corecount: 8
[2025-11-27 02:23:02] 2025-11-27 07:22:20,217 | INFO     | event service: False
[2025-11-27 02:23:02] 2025-11-27 07:22:20,217 | INFO     | sizes: {0: 2284141, 1: 2284340, 12: 2284340, 18: 2284630, 23: 2284658, 81211: 2347165, 81221: 2356215, 81256: 2356405}
[2025-11-27 02:23:02] 2025-11-27 07:22:20,217 | INFO     | --------------------------------------------------
[2025-11-27 02:23:02] 2025-11-27 07:22:20,217 | INFO     | 
[2025-11-27 02:23:02] 2025-11-27 07:22:20,217 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 02:23:02] 2025-11-27 07:22:20,296 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 02:23:02] 2025-11-27 07:22:20,297 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 02:23:02] 2025-11-27 07:22:20,297 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 02:23:02] 2025-11-27 07:22:20,297 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 02:23:02] 2025-11-27 07:22:20,297 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 02:23:02] 2025-11-27 07:22:20,297 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 02:23:02] 2025-11-27 07:22:20,297 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 02:23:02] 2025-11-27 07:22:20,297 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 02:23:02] 2025-11-27 07:22:20,298 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 02:23:02] 2025-11-27 07:22:20,298 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 02:23:02] 2025-11-27 07:22:20,298 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 02:23:02] 2025-11-27 07:22:20,298 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 02:23:02] 2025-11-27 07:22:20,298 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 02:23:02] 2025-11-27 07:22:20,298 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 02:23:02] 2025-11-27 07:22:20,298 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 02:23:02] 2025-11-27 07:22:20,298 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 02:23:02] 2025-11-27 07:22:20,298 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 02:23:02] 2025-11-27 07:22:20,298 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 02:23:02] 2025-11-27 07:22:20,298 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 02:23:02] 2025-11-27 07:22:20,299 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 02:23:02] 2025-11-27 07:22:20,299 | INFO     | job 6896922376 has completed (purged errors)
[2025-11-27 02:23:02] 2025-11-27 07:22:20,299 | INFO     | overall cleanup function is called
[2025-11-27 02:23:02] 2025-11-27 07:22:21,327 | INFO     | --- collectZombieJob: --- 10, [1949055]
[2025-11-27 02:23:02] 2025-11-27 07:22:21,327 | INFO     | zombie collector waiting for pid 1949055
[2025-11-27 02:23:02] 2025-11-27 07:22:21,327 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 02:23:02] 2025-11-27 07:22:21,327 | INFO     | collected zombie processes
[2025-11-27 02:23:02] 2025-11-27 07:22:21,328 | INFO     | will attempt to kill all subprocesses of pid=1949055
[2025-11-27 02:23:02] 2025-11-27 07:22:22,024 | INFO     | process IDs to be killed: [1949055] (in reverse order)
[2025-11-27 02:23:02] 2025-11-27 07:22:22,235 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 02:23:02] 2025-11-27 07:22:22,236 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 02:23:02] 2025-11-27 07:22:22,269 | INFO     | did not find any defunct processes belonging to 1949055
[2025-11-27 02:23:02] 2025-11-27 07:22:22,302 | INFO     | did not find any defunct processes belonging to 1949055
[2025-11-27 02:23:02] 2025-11-27 07:22:22,308 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 02:23:02] 2025-11-27 07:22:22,308 | INFO     | ready for new job
[2025-11-27 02:23:02] 2025-11-27 07:22:22,309 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 02:23:02] 2025-11-27 07:22:22,319 | INFO     | ***************************************
[2025-11-27 02:23:02] 2025-11-27 07:22:22,319 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 02:23:02] 2025-11-27 07:22:22,319 | INFO     | ***************************************
[2025-11-27 02:23:02] 2025-11-27 07:22:22,319 | INFO     | 
[2025-11-27 02:23:02] 2025-11-27 07:22:22,326 | INFO     | architecture information:
[2025-11-27 02:23:02] 2025-11-27 07:22:22,327 | INFO     | executing command: cat /etc/os-release
[2025-11-27 02:23:02] 2025-11-27 07:22:22,381 | INFO     | cat /etc/os-release:
[2025-11-27 02:23:02] NAME="CentOS Linux"
[2025-11-27 02:23:02] VERSION="7 (Core)"
[2025-11-27 02:23:02] ID="centos"
[2025-11-27 02:23:02] ID_LIKE="rhel fedora"
[2025-11-27 02:23:02] VERSION_ID="7"
[2025-11-27 02:23:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 02:23:02] ANSI_COLOR="0;31"
[2025-11-27 02:23:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 02:23:02] HOME_URL="https://www.centos.org/"
[2025-11-27 02:23:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 02:23:02] 
[2025-11-27 02:23:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 02:23:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 02:23:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 02:23:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 02:23:02] 
[2025-11-27 02:23:02] 2025-11-27 07:22:22,381 | INFO     | ***************************************
[2025-11-27 02:23:02] 2025-11-27 07:22:22,884 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 02:23:02] 2025-11-27 07:22:22,989 | INFO     | sufficient remaining disk space (71519174656 B)
[2025-11-27 02:23:02] 2025-11-27 07:22:22,990 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 02:23:02] 2025-11-27 07:22:22,990 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 02:23:02] 2025-11-27 07:22:22,990 | INFO     | update_server=False
[2025-11-27 02:23:02] 2025-11-27 07:22:22,990 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 02:23:02] 2025-11-27 07:22:23,239 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:23:02] 2025-11-27 07:22:23,239 | INFO     | aborting loop
[2025-11-27 02:23:02] 2025-11-27 07:22:23,433 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 02:23:02] 2025-11-27 07:22:23,442 | INFO     | all data control threads have been joined
[2025-11-27 02:23:02] 2025-11-27 07:22:23,448 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 02:23:02] 2025-11-27 07:22:23,895 | INFO     | all payload control threads have been joined
[2025-11-27 02:23:02] 2025-11-27 07:22:23,955 | INFO     | all job control threads have been joined
[2025-11-27 02:23:02] 2025-11-27 07:22:24,008 | INFO     | [job] retrieve thread has finished
[2025-11-27 02:23:02] 2025-11-27 07:22:24,086 | INFO     | [data] copytool_in thread has finished
[2025-11-27 02:23:02] 2025-11-27 07:22:24,246 | INFO     | [job] job monitor thread has finished
[2025-11-27 02:23:02] 2025-11-27 07:22:24,447 | INFO     | [data] control thread has finished
[2025-11-27 02:23:02] 2025-11-27 07:22:24,548 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 02:23:02] 2025-11-27 07:22:24,903 | INFO     | [payload] control thread has finished
[2025-11-27 02:23:02] 2025-11-27 07:22:24,960 | INFO     | [job] control thread has finished
[2025-11-27 02:23:02] 2025-11-27 07:22:25,051 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 02:23:02] 2025-11-27 07:22:25,077 | INFO     | [payload] validate_post thread has finished
[2025-11-27 02:23:02] 2025-11-27 07:22:25,150 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 02:23:02] 2025-11-27 07:22:25,150 | INFO     | [job] validate thread has finished
[2025-11-27 02:23:02] 2025-11-27 07:22:25,215 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 02:23:02] 2025-11-27 07:22:25,242 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:23:02] 2025-11-27 07:22:25,440 | INFO     | [data] copytool_out thread has finished
[2025-11-27 02:23:02] 2025-11-27 07:22:25,471 | INFO     | [payload] failed_post thread has finished
[2025-11-27 02:23:02] 2025-11-27 07:22:26,262 | INFO     | [job] queue monitor thread has finished
[2025-11-27 02:23:02] 2025-11-27 07:22:27,481 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 02:23:02] 2025-11-27 07:22:53,720 | INFO     | PID=1941801 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 02:23:02] 2025-11-27 07:22:53,720 | INFO     | .. there are 42 such processes running
[2025-11-27 02:23:02] 2025-11-27 07:22:53,720 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 02:23:02] 2025-11-27 07:22:53,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 02:23:02] 2025-11-27 07:22:53,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 02:23:02] 2025-11-27 07:22:53,860 | INFO     | [monitor] cgroup control has ended
[2025-11-27 02:23:02] 2025-11-27 07:22:55,739 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140614129506112)>', '<ExcThread(monitor, started 140613185951488)>']
[2025-11-27 02:23:02] 2025-11-27 07:22:56,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 02:23:02] 2025-11-27 07:22:56,736 | INFO     | [monitor] control thread has ended
[2025-11-27 02:23:02] 2025-11-27 07:23:00,768 | INFO     | all workflow threads have been joined
[2025-11-27 02:23:02] 2025-11-27 07:23:00,768 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 02:23:02] 2025-11-27 07:23:00,769 | INFO     | traces error code: 0
[2025-11-27 02:23:02] 2025-11-27 07:23:00,769 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 02:23:02] 2025-11-27 07:23:01,402 [wrapper] ==== pilot stdout END ====
[2025-11-27 02:23:02] 2025-11-27 07:23:01,422 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 02:23:02] 2025-11-27 07:23:01,450 [wrapper] pilotpid: 1941801
[2025-11-27 02:23:02] 2025-11-27 07:23:01,468 [wrapper] Pilot exit status: 0
[2025-11-27 02:23:02] 2025-11-27 07:23:01,604 [wrapper] pandaids: 6896922376
[2025-11-27 02:23:02] 2025-11-27 07:23:01,917 [wrapper] cleanup supervisor_pilot 3371230 1941802
[2025-11-27 02:23:02] 2025-11-27 07:23:01,936 [wrapper] Test setup, not cleaning
[2025-11-27 02:23:02] 2025-11-27 07:23:01,987 [wrapper] apfmon messages muted
[2025-11-27 02:23:02] 2025-11-27 07:23:02,033 [wrapper] ==== wrapper stdout END ====
[2025-11-27 02:23:02] 2025-11-27 07:23:02,089 [wrapper] ==== wrapper stderr END ====
[2025-11-27 02:23:02]  *** Error codes and diagnostics ***
[2025-11-27 02:23:02]     "exeErrorCode": 0,
[2025-11-27 02:23:02]     "exeErrorDiag": "",
[2025-11-27 02:23:02]     "pilotErrorCode": 0,
[2025-11-27 02:23:02]     "pilotErrorDiag": "",
[2025-11-27 02:23:02]  *** Listing of results directory ***
[2025-11-27 02:23:02] total 1338184
[2025-11-27 02:23:02] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 05:51 pilot3.tar.gz
[2025-11-27 02:23:02] -rwx------. 1 boincer umatlas     36292 Nov 25 06:09 runpilot2-wrapper.sh
[2025-11-27 02:23:02] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 06:09 queuedata.json
[2025-11-27 02:23:02] -rw-r--r--. 1 boincer umatlas       100 Nov 26 03:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 02:23:02] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 03:46 run_atlas
[2025-11-27 02:23:02] -rw-r--r--. 1 boincer umatlas       105 Nov 26 03:46 job.xml
[2025-11-27 02:23:02] -rw-r--r--. 2 boincer umatlas 409062201 Nov 26 03:46 EVNT.47483658._003075.pool.root.1
[2025-11-27 02:23:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 03:46 start_atlas.sh
[2025-11-27 02:23:02] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 03:46 shared
[2025-11-27 02:23:02] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 03:46 input.tar.gz
[2025-11-27 02:23:02] -rw-r--r--. 1 boincer umatlas         0 Nov 26 03:46 boinc_lockfile
[2025-11-27 02:23:02] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 03:46 pandaJob.out
[2025-11-27 02:23:02] -rw-------. 1 boincer umatlas        57 Nov 26 03:46 setup.sh.local
[2025-11-27 02:23:02] -rw-------. 1 boincer umatlas    991877 Nov 26 03:47 agis_schedconf.cvmfs.json
[2025-11-27 02:23:02] drwx------. 5 boincer umatlas      4096 Nov 26 03:47 pilot3
[2025-11-27 02:23:02] -rw-r--r--. 1 boincer umatlas       533 Nov 27 01:50 boinc_task_state.xml
[2025-11-27 02:23:02] -rw-r--r--. 1 boincer umatlas      6660 Nov 27 02:18 init_data.xml
[2025-11-27 02:23:02] -rw-------. 1 boincer umatlas 932141987 Nov 27 02:19 HITS.47556173._000574.pool.root.1
[2025-11-27 02:23:02] -rw-------. 1 boincer umatlas      1059 Nov 27 02:21 memory_monitor_summary.json
[2025-11-27 02:23:02] -rw-------. 1 boincer umatlas   1516240 Nov 27 02:21 agis_ddmendpoints.agis.ALL.json
[2025-11-27 02:23:02] -rw-------. 1 boincer umatlas   2399028 Nov 27 02:21 log.47556173._000574.job.log.tgz.1
[2025-11-27 02:23:02] -rw-------. 1 boincer umatlas        95 Nov 27 02:22 pilot_heartbeat.json
[2025-11-27 02:23:02] -rw-------. 1 boincer umatlas      8626 Nov 27 02:22 heartbeat.json
[2025-11-27 02:23:02] -rw-r--r--. 1 boincer umatlas        29 Nov 27 02:22 wrapper_checkpoint.txt
[2025-11-27 02:23:02] -rw-------. 1 boincer umatlas      4824 Nov 27 02:23 pilotlog.txt
[2025-11-27 02:23:02] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 02:23 boinc_mmap_file
[2025-11-27 02:23:02] -rw-------. 1 boincer umatlas  10188011 Nov 27 02:23 log.47556173._000574.job.log.1
[2025-11-27 02:23:02] -rw-------. 1 boincer umatlas       353 Nov 27 02:23 output.list
[2025-11-27 02:23:02] -rw-r--r--. 1 boincer umatlas       620 Nov 27 02:23 runtime_log
[2025-11-27 02:23:02] -rw-------. 1 boincer umatlas  12605440 Nov 27 02:23 result.tar.gz
[2025-11-27 02:23:02] -rw-r--r--. 1 boincer umatlas      9333 Nov 27 02:23 runtime_log.err
[2025-11-27 02:23:02] -rw-------. 1 boincer umatlas       658 Nov 27 02:23 gQNLDmX65h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0KMKDm8s8XXm.diag
[2025-11-27 02:23:02] -rw-r--r--. 1 boincer umatlas     21843 Nov 27 02:23 stderr.txt
[2025-11-27 02:23:02] HITS file was successfully produced:
[2025-11-27 02:23:02] -rw-------. 1 boincer umatlas 932141987 Nov 27 02:19 shared/HITS.pool.root.1
[2025-11-27 02:23:02]  *** Contents of shared directory: ***
[2025-11-27 02:23:02] total 1322688
[2025-11-27 02:23:02] -rw-r--r--. 2 boincer umatlas 409062201 Nov 26 03:46 ATLAS.root_0
[2025-11-27 02:23:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 03:46 start_atlas.sh
[2025-11-27 02:23:02] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 03:46 input.tar.gz
[2025-11-27 02:23:02] -rw-------. 1 boincer umatlas 932141987 Nov 27 02:19 HITS.pool.root.1
[2025-11-27 02:23:02] -rw-------. 1 boincer umatlas  12605440 Nov 27 02:23 result.tar.gz
02:23:04 (1932289): run_atlas exited; CPU time 299455.947367
02:23:04 (1932289): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN