Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:42:09 (3582334): wrapper (7.7.26015): starting
09:42:09 (3582334): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 09:42:09] Arguments: --nthreads 3
[2025-11-26 09:42:09] Threads: 3
[2025-11-26 09:42:09] Checking for CVMFS
[2025-11-26 09:42:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:42:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:42:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:42:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:42:10] 2.9.2.0 2184780 551 71460 153315 3 88 35578237 36864001 0 130560 0 4169108 99.999 18340 29485 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 09:42:10] CVMFS is ok
[2025-11-26 09:42:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 09:42:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 09:42:10] Further information can be found at the LHC@home message board.
[2025-11-26 09:42:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:42:10] Checking for apptainer binary...
[2025-11-26 09:42:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 09:42:10] Running /usr/bin/apptainer --version
[2025-11-26 09:42:10] apptainer version 1.4.1-1.1
[2025-11-26 09:42:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:42:10] thA335
[2025-11-26 09:42:10] apptainer works
[2025-11-26 09:42:10] Set ATHENA_PROC_NUMBER=3
[2025-11-26 09:42:10] Set ATHENA_CORE_NUMBER=3
[2025-11-26 09:42:10] Starting ATLAS job with PandaID=6896766450
[2025-11-26 09:42:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 09:46:29]  *** The last 200 lines of the pilot log: ***
[2025-11-26 09:46:29] 2025-11-26 08:45:36,882 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 09:46:29] 2025-11-26 08:45:36,895 | INFO     | sufficient remaining disk space (826847264768 B)
[2025-11-26 09:46:29] 2025-11-26 08:45:36,895 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 09:46:29] 2025-11-26 08:45:36,895 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 09:46:29] 2025-11-26 08:45:36,895 | INFO     | update_server=False
[2025-11-26 09:46:29] 2025-11-26 08:45:36,895 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 09:46:29] 2025-11-26 08:45:36,895 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 09:46:29] 2025-11-26 08:45:36,896 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 09:46:29] 2025-11-26 08:45:36,896 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:46:29] 2025-11-26 08:45:36,896 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 09:46:29] 2025-11-26 08:45:36,896 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 09:46:29] 2025-11-26 08:45:36,896 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 09:46:29] 2025-11-26 08:45:36,985 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:46:29] 2025-11-26 08:45:36,985 | INFO     | aborting loop
[2025-11-26 09:46:29] 2025-11-26 08:45:37,549 | INFO     | all payload control threads have been joined
[2025-11-26 09:46:29] 2025-11-26 08:45:37,623 | INFO     | all data control threads have been joined
[2025-11-26 09:46:29] 2025-11-26 08:45:37,898 | INFO     | all job control threads have been joined
[2025-11-26 09:46:29] 2025-11-26 08:45:37,901 | INFO     | [job] retrieve thread has finished
[2025-11-26 09:46:29] 2025-11-26 08:45:37,902 | INFO     | [job] queue monitor thread has finished
[2025-11-26 09:46:29] 2025-11-26 08:45:37,903 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 09:46:29] 2025-11-26 08:45:37,991 | INFO     | [job] job monitor thread has finished
[2025-11-26 09:46:29] 2025-11-26 08:45:38,047 | INFO     | [payload] validate_post thread has finished
[2025-11-26 09:46:29] 2025-11-26 08:45:38,286 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 09:46:29] 2025-11-26 08:45:38,356 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 09:46:29] 2025-11-26 08:45:38,515 | INFO     | [job] validate thread has finished
[2025-11-26 09:46:29] 2025-11-26 08:45:38,523 | INFO     | [data] copytool_in thread has finished
[2025-11-26 09:46:29] 2025-11-26 08:45:38,556 | INFO     | [payload] control thread has finished
[2025-11-26 09:46:29] 2025-11-26 08:45:38,574 | INFO     | [payload] failed_post thread has finished
[2025-11-26 09:46:29] 2025-11-26 08:45:38,601 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 09:46:29] 2025-11-26 08:45:38,629 | INFO     | [data] control thread has finished
[2025-11-26 09:46:29] 2025-11-26 08:45:38,653 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 09:46:29] 2025-11-26 08:45:38,903 | INFO     | [job] control thread has finished
[2025-11-26 09:46:29] 2025-11-26 08:45:40,293 | INFO     | [data] copytool_out thread has finished
[2025-11-26 09:46:29] 2025-11-26 08:45:40,902 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 09:46:29] 2025-11-26 08:46:23,276 | INFO     | [monitor] cgroup control has ended
[2025-11-26 09:46:29] 2025-11-26 08:46:24,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140648849057600)>', '<ExcThread(monitor, started 140648191600384)>']
[2025-11-26 09:46:29] 2025-11-26 08:46:25,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 09:46:29] 2025-11-26 08:46:25,148 | INFO     | [monitor] control thread has ended
[2025-11-26 09:46:29] 2025-11-26 08:46:29,309 | INFO     | all workflow threads have been joined
[2025-11-26 09:46:29] 2025-11-26 08:46:29,309 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 09:46:29] 2025-11-26 08:46:29,309 | INFO     | traces error code: 0
[2025-11-26 09:46:29] 2025-11-26 08:46:29,310 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 09:46:29] 2025-11-26 08:46:29,354 [wrapper] ==== pilot stdout END ====
[2025-11-26 09:46:29] 2025-11-26 08:46:29,358 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 09:46:29] 2025-11-26 08:46:29,361 [wrapper] pilotpid: 3586059
[2025-11-26 09:46:29] 2025-11-26 08:46:29,364 [wrapper] Pilot exit status: 0
[2025-11-26 09:46:29] 2025-11-26 08:46:29,371 [wrapper] pandaids: 6896766450
[2025-11-26 09:46:29] 2025-11-26 08:46:29,388 [wrapper] cleanup supervisor_pilot 3586065 3586060
[2025-11-26 09:46:29] 2025-11-26 08:46:29,390 [wrapper] Test setup, not cleaning
[2025-11-26 09:46:29] 2025-11-26 08:46:29,393 [wrapper] apfmon messages muted
[2025-11-26 09:46:29] 2025-11-26 08:46:29,395 [wrapper] ==== wrapper stdout END ====
[2025-11-26 09:46:29] 2025-11-26 08:46:29,398 [wrapper] ==== wrapper stderr END ====
[2025-11-26 09:46:29]  *** Error codes and diagnostics ***
[2025-11-26 09:46:29]     "exeErrorCode": 65,
[2025-11-26 09:46:29]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-26 09:46:29]     "pilotErrorCode": 1305,
[2025-11-26 09:46:29]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-26 09:46:29]  *** Listing of results directory ***
[2025-11-26 09:46:29] total 407104
[2025-11-26 09:46:29] -rw-r--r-- 1 boinc boinc    576529 Nov 25 10:44 pilot3.tar.gz
[2025-11-26 09:46:29] -rwx------ 1 boinc boinc     36292 Nov 25 11:06 runpilot2-wrapper.sh
[2025-11-26 09:46:29] -rw-r--r-- 1 boinc boinc      5112 Nov 25 11:06 queuedata.json
[2025-11-26 09:46:29] -rw-r--r-- 1 boinc boinc       100 Nov 26 09:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 09:46:29] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 09:42 run_atlas
[2025-11-26 09:46:29] -rw-r--r-- 1 boinc boinc       105 Nov 26 09:42 job.xml
[2025-11-26 09:46:29] -rw-r--r-- 2 boinc boinc 412692344 Nov 26 09:42 EVNT.47483658._004279.pool.root.1
[2025-11-26 09:46:29] -rw-r--r-- 2 boinc boinc    590100 Nov 26 09:42 input.tar.gz
[2025-11-26 09:46:29] -rw-r--r-- 2 boinc boinc     15847 Nov 26 09:42 start_atlas.sh
[2025-11-26 09:46:29] drwxrwx--x 2 boinc boinc      4096 Nov 26 09:42 shared
[2025-11-26 09:46:29] -rw-r--r-- 1 boinc boinc         0 Nov 26 09:42 boinc_setup_complete
[2025-11-26 09:46:29] -rw-r--r-- 1 boinc boinc      6196 Nov 26 09:42 init_data.xml
[2025-11-26 09:46:29] -rw-r--r-- 1 boinc boinc         0 Nov 26 09:42 boinc_lockfile
[2025-11-26 09:46:29] -rw-r--r-- 1 boinc boinc      2785 Nov 26 09:42 pandaJob.out
[2025-11-26 09:46:29] -rw------- 1 boinc boinc    991877 Nov 26 09:42 agis_schedconf.cvmfs.json
[2025-11-26 09:46:29] -rw------- 1 boinc boinc   1516240 Nov 26 09:42 agis_ddmendpoints.agis.ALL.json
[2025-11-26 09:46:29] drwx------ 5 boinc boinc      4096 Nov 26 09:42 pilot3
[2025-11-26 09:46:29] -rw-r--r-- 1 boinc boinc       522 Nov 26 09:43 boinc_task_state.xml
[2025-11-26 09:46:29] -rw------- 1 boinc boinc       957 Nov 26 09:43 memory_monitor_summary.json
[2025-11-26 09:46:29] -rw------- 1 boinc boinc     56079 Nov 26 09:43 log.47556185._000427.job.log.tgz.1
[2025-11-26 09:46:29] -rw------- 1 boinc boinc        95 Nov 26 09:45 pilot_heartbeat.json
[2025-11-26 09:46:29] -rw------- 1 boinc boinc      8399 Nov 26 09:45 heartbeat.json
[2025-11-26 09:46:29] -rw-r--r-- 1 boinc boinc      8192 Nov 26 09:46 boinc_mmap_file
[2025-11-26 09:46:29] -rw-r--r-- 1 boinc boinc        22 Nov 26 09:46 wrapper_checkpoint.txt
[2025-11-26 09:46:29] -rw------- 1 boinc boinc      4556 Nov 26 09:46 pilotlog.txt
[2025-11-26 09:46:29] -rw------- 1 boinc boinc     93027 Nov 26 09:46 log.47556185._000427.job.log.1
[2025-11-26 09:46:29] -rw------- 1 boinc boinc       186 Nov 26 09:46 output.list
[2025-11-26 09:46:29] -rw-r--r-- 1 boinc boinc       620 Nov 26 09:46 runtime_log
[2025-11-26 09:46:29] -rw------- 1 boinc boinc    163840 Nov 26 09:46 result.tar.gz
[2025-11-26 09:46:29] -rw-r--r-- 1 boinc boinc      8744 Nov 26 09:46 runtime_log.err
[2025-11-26 09:46:29] -rw------- 1 boinc boinc       649 Nov 26 09:46 kAwKDmP74h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuJMKDm60tevm.diag
[2025-11-26 09:46:29] -rw-r--r-- 1 boinc boinc      8160 Nov 26 09:46 stderr.txt
[2025-11-26 09:46:29] No HITS result produced
[2025-11-26 09:46:29]  *** Contents of shared directory: ***
[2025-11-26 09:46:29] total 403776
[2025-11-26 09:46:29] -rw-r--r-- 2 boinc boinc 412692344 Nov 26 09:42 ATLAS.root_0
[2025-11-26 09:46:29] -rw-r--r-- 2 boinc boinc    590100 Nov 26 09:42 input.tar.gz
[2025-11-26 09:46:29] -rw-r--r-- 2 boinc boinc     15847 Nov 26 09:42 start_atlas.sh
[2025-11-26 09:46:29] -rw------- 1 boinc boinc    163840 Nov 26 09:46 result.tar.gz
09:46:31 (3582334): run_atlas exited; CPU time 31.820874
09:46:31 (3582334): called boinc_finish(0)

</stderr_txt>
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