Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
01:27:53 (1205537): wrapper (7.7.26015): starting
01:27:53 (1205537): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 01:27:53] Arguments: --nthreads 12
[2025-11-27 01:27:53] Threads: 12
[2025-11-27 01:27:53] Checking for CVMFS
[2025-11-27 01:27:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:27:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:27:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:27:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:27:55] 2.13.0.0 1205745 0 27964 153341 3 1 4726238 6144000 0 130560 0 0 0.000 1292 2208 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-27 01:27:55] CVMFS is ok
[2025-11-27 01:27:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 01:27:55] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-27 01:27:55] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-27 01:27:55] Further information can be found at the LHC@home message board.
[2025-11-27 01:27:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:27:55] Checking for apptainer binary...
[2025-11-27 01:27:55] apptainer is not installed, using version from CVMFS
[2025-11-27 01:27:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:27:56] Debian-bookworm-latest-amd64-base
[2025-11-27 01:27:56] apptainer works
[2025-11-27 01:27:56] Set ATHENA_PROC_NUMBER=12
[2025-11-27 01:27:56] Set ATHENA_CORE_NUMBER=12
[2025-11-27 01:27:56] Starting ATLAS job with PandaID=6891579452
[2025-11-27 01:27:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 08:29:47]  *** The last 200 lines of the pilot log: ***
[2025-11-27 08:29:47] 2025-11-27 04:26:22,260 | INFO     | monitor loop #1069: job 0:6891579452 is in state 'finished'
[2025-11-27 08:29:47] 2025-11-27 04:26:22,260 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 08:29:47] 2025-11-27 04:26:23,814 | INFO     | time since job start (14299s) is within the limit (172800.0s)
[2025-11-27 08:29:47] 2025-11-27 04:26:23,817 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 08:29:47] 2025-11-27 04:26:23,819 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3999.04
[2025-11-27 08:29:47] 2025-11-27 04:26:23,821 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6891579452/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 08:29:47] 2025-11-27 04:26:23,821 | INFO     | extracted standard info from prmon json
[2025-11-27 08:29:47] 2025-11-27 04:26:23,821 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 08:29:47] 2025-11-27 04:26:23,821 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 08:29:47] 2025-11-27 04:26:23,823 | INFO     | fitting pss+swap vs Time
[2025-11-27 08:29:47] 2025-11-27 04:26:23,824 | INFO     | sum of square deviations: 3973097627.098299
[2025-11-27 08:29:47] 2025-11-27 04:26:23,825 | INFO     | sum of deviations: 137498310368.1153
[2025-11-27 08:29:47] 2025-11-27 04:26:23,825 | INFO     | mean x: 1764210409.8162394
[2025-11-27 08:29:47] 2025-11-27 04:26:23,825 | INFO     | mean y: 3609698.653846154
[2025-11-27 08:29:47] 2025-11-27 04:26:23,825 | INFO     | intersect: -61051006434.88814
[2025-11-27 08:29:47] 2025-11-27 04:26:23,825 | INFO     | chi2: 4.2004354611529005
[2025-11-27 08:29:47] 2025-11-27 04:26:23,825 | INFO     | sum of square deviations: 3723841104.087321
[2025-11-27 08:29:47] 2025-11-27 04:26:23,826 | INFO     | sum of deviations: 213140529376.54144
[2025-11-27 08:29:47] 2025-11-27 04:26:23,826 | INFO     | mean x: 1764210257.3231442
[2025-11-27 08:29:47] 2025-11-27 04:26:23,826 | INFO     | mean y: 3655763.80349345
[2025-11-27 08:29:47] 2025-11-27 04:26:23,827 | INFO     | intersect: -100973990077.38219
[2025-11-27 08:29:47] 2025-11-27 04:26:23,827 | INFO     | chi2: 1.8767762090158184
[2025-11-27 08:29:47] 2025-11-27 04:26:23,827 | INFO     | current chi2=1.8767762090158184 (change=55.31948469693434 %)
[2025-11-27 08:29:47] 2025-11-27 04:26:23,827 | INFO     | sum of square deviations: 3485221730.2098274
[2025-11-27 08:29:47] 2025-11-27 04:26:23,828 | INFO     | sum of deviations: 203957949896.28122
[2025-11-27 08:29:47] 2025-11-27 04:26:23,828 | INFO     | mean x: 1764210104.825893
[2025-11-27 08:29:47] 2025-11-27 04:26:23,828 | INFO     | mean y: 3649899.46875
[2025-11-27 08:29:47] 2025-11-27 04:26:23,828 | INFO     | intersect: -103239329750.18738
[2025-11-27 08:29:47] 2025-11-27 04:26:23,828 | INFO     | chi2: 1.8756593191974755
[2025-11-27 08:29:47] 2025-11-27 04:26:23,828 | INFO     | current chi2=1.8756593191974755 (change=0.059511081447936744 %)
[2025-11-27 08:29:47] 2025-11-27 04:26:23,828 | INFO     | right removable region: 223
[2025-11-27 08:29:47] 2025-11-27 04:26:23,829 | INFO     | sum of square deviations: 3723795964.087321
[2025-11-27 08:29:47] 2025-11-27 04:26:23,830 | INFO     | sum of deviations: 69308294517.68552
[2025-11-27 08:29:47] 2025-11-27 04:26:23,830 | INFO     | mean x: 1764210562.3231442
[2025-11-27 08:29:47] 2025-11-27 04:26:23,830 | INFO     | mean y: 3651122.4366812226
[2025-11-27 08:29:47] 2025-11-27 04:26:23,830 | INFO     | intersect: -32832311541.450233
[2025-11-27 08:29:47] 2025-11-27 04:26:23,830 | INFO     | chi2: 2.4086103229145146
[2025-11-27 08:29:47] 2025-11-27 04:26:23,830 | INFO     | current chi2=2.4086103229145146 (change=42.65808044927277 %)
[2025-11-27 08:29:47] 2025-11-27 04:26:23,830 | INFO     | sum of square deviations: 3485159876.2098274
[2025-11-27 08:29:47] 2025-11-27 04:26:23,831 | INFO     | sum of deviations: 55441566406.11606
[2025-11-27 08:29:47] 2025-11-27 04:26:23,831 | INFO     | mean x: 1764210714.825893
[2025-11-27 08:29:47] 2025-11-27 04:26:23,831 | INFO     | mean y: 3659970.6696428573
[2025-11-27 08:29:47] 2025-11-27 04:26:23,831 | INFO     | intersect: -28061223413.323624
[2025-11-27 08:29:47] 2025-11-27 04:26:23,832 | INFO     | chi2: 2.391184268745426
[2025-11-27 08:29:47] 2025-11-27 04:26:23,832 | INFO     | current chi2=2.391184268745426 (change=0.7234899727575066 %)
[2025-11-27 08:29:47] 2025-11-27 04:26:23,832 | INFO     | left removable region: 20
[2025-11-27 08:29:47] 2025-11-27 04:26:23,832 | INFO     | sum of square deviations: 2593992874.886694
[2025-11-27 08:29:47] 2025-11-27 04:26:23,833 | INFO     | sum of deviations: 100866161952.74387
[2025-11-27 08:29:47] 2025-11-27 04:26:23,833 | INFO     | mean x: 1764210684.3300493
[2025-11-27 08:29:47] 2025-11-27 04:26:23,833 | INFO     | mean y: 3718575.615763547
[2025-11-27 08:29:47] 2025-11-27 04:26:23,833 | INFO     | intersect: -68596763070.72209
[2025-11-27 08:29:47] 2025-11-27 04:26:23,833 | INFO     | chi2: 0.015164996570540197
[2025-11-27 08:29:47] 2025-11-27 04:26:23,833 | INFO     | current memory leak: 38.88 B/s (using 203 data points, chi2=0.02)
[2025-11-27 08:29:47] 2025-11-27 04:26:23,833 | INFO     | could have reported an average CPU frequency of 3940 MHz (11 samples)
[2025-11-27 08:29:47] 2025-11-27 04:26:23,833 | INFO     | ..............................
[2025-11-27 08:29:47] 2025-11-27 04:26:23,834 | INFO     | . Timing measurements:
[2025-11-27 08:29:47] 2025-11-27 04:26:23,834 | INFO     | . get job = 0 s
[2025-11-27 08:29:47] 2025-11-27 04:26:23,834 | INFO     | . initial setup = 1 s
[2025-11-27 08:29:47] 2025-11-27 04:26:23,834 | INFO     | . payload setup = 2 s
[2025-11-27 08:29:47] 2025-11-27 04:26:23,834 | INFO     | . stage-in = 0 s
[2025-11-27 08:29:47] 2025-11-27 04:26:23,834 | INFO     | . payload execution = 14259 s
[2025-11-27 08:29:47] 2025-11-27 04:26:23,834 | INFO     | . stage-out = 2 s
[2025-11-27 08:29:47] 2025-11-27 04:26:23,834 | INFO     | . log creation = 0 s
[2025-11-27 08:29:47] 2025-11-27 04:26:23,834 | INFO     | ..............................
[2025-11-27 08:29:47] 2025-11-27 04:26:23,890 | INFO     | 
[2025-11-27 08:29:47] 2025-11-27 04:26:23,890 | INFO     | job summary report
[2025-11-27 08:29:47] 2025-11-27 04:26:23,890 | INFO     | --------------------------------------------------
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | PanDA job id: 6891579452
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | task id: 47493068
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | errors: (none)
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | pilot state: finished 
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | transexitcode: 0
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | exeerrorcode: 0
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | exeerrordiag: 
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | exitcode: 0
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | exitmsg: OK
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | cpuconsumptiontime: 162552 s
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | nevents: 1000
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | neventsw: 0
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | pid: 1216737
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | pgrp: 1216737
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | corecount: 12
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | event service: False
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | sizes: {0: 2284305, 2: 2284567, 11: 2284595, 14266: 2316451, 14269: 2325459, 14270: 2325515, 14286: 2325889}
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | --------------------------------------------------
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | 
[2025-11-27 08:29:47] 2025-11-27 04:26:23,891 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-27 08:29:47] 2025-11-27 04:26:23,935 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 08:29:47] 2025-11-27 04:26:23,936 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 08:29:47] 2025-11-27 04:26:23,936 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 08:29:47] 2025-11-27 04:26:23,936 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 08:29:47] 2025-11-27 04:26:23,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 08:29:47] 2025-11-27 04:26:23,936 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 08:29:47] 2025-11-27 04:26:23,936 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 08:29:47] 2025-11-27 04:26:23,936 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 08:29:47] 2025-11-27 04:26:23,936 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 08:29:47] 2025-11-27 04:26:23,936 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 08:29:47] 2025-11-27 04:26:23,936 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 08:29:47] 2025-11-27 04:26:23,936 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 08:29:47] 2025-11-27 04:26:23,936 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 08:29:47] 2025-11-27 04:26:23,936 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 08:29:47] 2025-11-27 04:26:23,936 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 08:29:47] 2025-11-27 04:26:23,936 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 08:29:47] 2025-11-27 04:26:23,936 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 08:29:47] 2025-11-27 04:26:23,936 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 08:29:47] 2025-11-27 04:26:23,936 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 08:29:47] 2025-11-27 04:26:23,936 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 08:29:47] 2025-11-27 04:26:23,937 | INFO     | job 6891579452 has completed (purged errors)
[2025-11-27 08:29:47] 2025-11-27 04:26:23,937 | INFO     | overall cleanup function is called
[2025-11-27 08:29:47] 2025-11-27 04:26:24,890 | INFO     | PID=1209947 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 08:29:47] 2025-11-27 04:26:24,953 | INFO     | --- collectZombieJob: --- 10, [1216737]
[2025-11-27 08:29:47] 2025-11-27 04:26:24,953 | INFO     | zombie collector waiting for pid 1216737
[2025-11-27 08:29:47] 2025-11-27 04:26:24,954 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 08:29:47] 2025-11-27 04:26:24,954 | INFO     | collected zombie processes
[2025-11-27 08:29:47] 2025-11-27 04:26:24,954 | INFO     | will attempt to kill all subprocesses of pid=1216737
[2025-11-27 08:29:47] 2025-11-27 04:26:25,017 | INFO     | process IDs to be killed: [1216737] (in reverse order)
[2025-11-27 08:29:47] 2025-11-27 04:26:25,119 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 08:29:47] 2025-11-27 04:26:25,119 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 08:29:47] 2025-11-27 04:26:25,121 | INFO     | did not find any defunct processes belonging to 1216737
[2025-11-27 08:29:47] 2025-11-27 04:26:25,122 | INFO     | did not find any defunct processes belonging to 1216737
[2025-11-27 08:29:47] 2025-11-27 04:26:25,123 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 08:29:47] 2025-11-27 04:26:25,123 | INFO     | ready for new job
[2025-11-27 08:29:47] 2025-11-27 04:26:25,123 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 08:29:47] 2025-11-27 04:26:25,125 | INFO     | ***************************************
[2025-11-27 08:29:47] 2025-11-27 04:26:25,125 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 08:29:47] 2025-11-27 04:26:25,125 | INFO     | ***************************************
[2025-11-27 08:29:47] 2025-11-27 04:26:25,125 | INFO     | 
[2025-11-27 08:29:47] 2025-11-27 04:26:25,126 | INFO     | architecture information:
[2025-11-27 08:29:47] 2025-11-27 04:26:25,126 | INFO     | executing command: cat /etc/os-release
[2025-11-27 08:29:47] 2025-11-27 04:26:25,151 | INFO     | cat /etc/os-release:
[2025-11-27 08:29:47] NAME="CentOS Linux"
[2025-11-27 08:29:47] VERSION="7 (Core)"
[2025-11-27 08:29:47] ID="centos"
[2025-11-27 08:29:47] ID_LIKE="rhel fedora"
[2025-11-27 08:29:47] VERSION_ID="7"
[2025-11-27 08:29:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 08:29:47] ANSI_COLOR="0;31"
[2025-11-27 08:29:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 08:29:47] HOME_URL="https://www.centos.org/"
[2025-11-27 08:29:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 08:29:47] 
[2025-11-27 08:29:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 08:29:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 08:29:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 08:29:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 08:29:47] 
[2025-11-27 08:29:47] 2025-11-27 04:26:25,151 | INFO     | ***************************************
[2025-11-27 08:29:47] 2025-11-27 04:26:25,653 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-27 08:29:47] 2025-11-27 04:26:25,687 | INFO     | sufficient remaining disk space (757025734656 B)
[2025-11-27 08:29:47] 2025-11-27 04:26:25,687 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 08:29:47] 2025-11-27 04:26:25,687 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 08:29:47] 2025-11-27 04:26:25,687 | INFO     | update_server=False
[2025-11-27 08:29:47] 2025-11-27 04:26:25,687 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 08:29:47] 2025-11-27 04:26:25,687 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 08:29:47] 2025-11-27 04:26:25,687 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:29:47] 2025-11-27 04:26:25,688 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 08:29:47] 2025-11-27 04:26:25,688 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 08:29:47] 2025-11-27 04:26:25,688 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 08:29:47] 2025-11-27 04:26:25,688 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 08:29:47] 2025-11-27 04:26:25,765 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:29:47] 2025-11-27 04:26:25,765 | INFO     | aborting loop
[2025-11-27 08:29:47] 2025-11-27 04:26:26,017 | INFO     | all data control threads have been joined
[2025-11-27 08:29:47] 2025-11-27 04:26:26,337 | INFO     | all payload control threads have been joined
[2025-11-27 08:29:47] 2025-11-27 04:26:26,521 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 08:29:47] 2025-11-27 04:26:26,689 | INFO     | [job] queue monitor thread has finished
[2025-11-27 08:29:47] 2025-11-27 04:26:26,690 | INFO     | [job] retrieve thread has finished
[2025-11-27 08:29:47] 2025-11-27 04:26:26,769 | INFO     | [job] job monitor thread has finished
[2025-11-27 08:29:47] 2025-11-27 04:26:26,781 | INFO     | [data] copytool_in thread has finished
[2025-11-27 08:29:47] 2025-11-27 04:26:26,841 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 08:29:47] 2025-11-27 04:26:26,957 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 08:29:47] 2025-11-27 04:26:26,973 | INFO     | [payload] failed_post thread has finished
[2025-11-27 08:29:47] 2025-11-27 04:26:26,989 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 08:29:47] 2025-11-27 04:26:27,021 | INFO     | all job control threads have been joined
[2025-11-27 08:29:47] 2025-11-27 04:26:27,021 | INFO     | [data] control thread has finished
[2025-11-27 08:29:47] 2025-11-27 04:26:27,341 | INFO     | [payload] control thread has finished
[2025-11-27 08:29:47] 2025-11-27 04:26:27,690 | INFO     | [data] copytool_out thread has finished
[2025-11-27 08:29:47] 2025-11-27 04:26:27,985 | INFO     | [job] validate thread has finished
[2025-11-27 08:29:47] 2025-11-27 04:26:27,989 | INFO     | [monitor] cgroup control has ended
[2025-11-27 08:29:47] 2025-11-27 04:26:28,025 | INFO     | [job] control thread has finished
[2025-11-27 08:29:47] 2025-11-27 04:26:28,189 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 08:29:47] 2025-11-27 04:26:28,245 | INFO     | [payload] validate_post thread has finished
[2025-11-27 08:29:47] 2025-11-27 04:26:30,525 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 08:29:47] 2025-11-27 04:26:31,453 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140058323457856)>', '<ExcThread(monitor, started 140057776207616)>']
[2025-11-27 08:29:47] 2025-11-27 04:26:31,709 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 08:29:47] 2025-11-27 04:26:31,709 | INFO     | [monitor] control thread has ended
[2025-11-27 08:29:47] 2025-11-27 04:26:36,477 | INFO     | all workflow threads have been joined
[2025-11-27 08:29:47] 2025-11-27 04:26:36,477 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 08:29:47] 2025-11-27 04:26:36,478 | INFO     | traces error code: 0
[2025-11-27 08:29:47] 2025-11-27 04:26:36,478 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 08:29:47] 2025-11-27 04:26:36,550 [wrapper] ==== pilot stdout END ====
[2025-11-27 08:29:47] 2025-11-27 04:26:36,558 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 08:29:47] 2025-11-27 04:26:36,566 [wrapper] pilotpid: 1209947
[2025-11-27 08:29:47] 2025-11-27 04:26:36,577 [wrapper] Pilot exit status: 0
[2025-11-27 08:29:47] 2025-11-27 04:26:36,610 [wrapper] pandaids: 6891579452
[2025-11-27 08:29:47] 2025-11-27 04:26:36,646 [wrapper] cleanup supervisor_pilot 1246741 1209948
[2025-11-27 08:29:47] 2025-11-27 04:26:36,658 [wrapper] Test setup, not cleaning
[2025-11-27 08:29:47] 2025-11-27 04:26:36,666 [wrapper] apfmon messages muted
[2025-11-27 08:29:47] 2025-11-27 04:26:36,674 [wrapper] ==== wrapper stdout END ====
[2025-11-27 08:29:47] 2025-11-27 04:26:36,682 [wrapper] ==== wrapper stderr END ====
[2025-11-27 08:29:47]  *** Error codes and diagnostics ***
[2025-11-27 08:29:47]     "exeErrorCode": 0,
[2025-11-27 08:29:47]     "exeErrorDiag": "",
[2025-11-27 08:29:47]     "pilotErrorCode": 0,
[2025-11-27 08:29:47]     "pilotErrorDiag": "",
[2025-11-27 08:29:47]  *** Listing of results directory ***
[2025-11-27 08:29:47] total 1307512
[2025-11-27 08:29:47] -rw-r--r-- 1 boinc boinc    576529 Nov 18 17:45 pilot3.tar.gz
[2025-11-27 08:29:47] -rw-r--r-- 1 boinc boinc      5112 Nov 18 17:48 queuedata.json
[2025-11-27 08:29:47] -rwx------ 1 boinc boinc     36292 Nov 18 17:49 runpilot2-wrapper.sh
[2025-11-27 08:29:47] -rw-r--r-- 1 boinc boinc       100 Nov 27 01:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 08:29:47] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 01:27 run_atlas
[2025-11-27 08:29:47] -rw-r--r-- 1 boinc boinc       105 Nov 27 01:27 job.xml
[2025-11-27 08:29:47] -rw-r--r-- 2 boinc boinc     15120 Nov 27 01:27 start_atlas.sh
[2025-11-27 08:29:47] drwxrwx--x 2 boinc boinc      4096 Nov 27 01:27 shared
[2025-11-27 08:29:47] -rw-r--r-- 2 boinc boinc    590093 Nov 27 01:27 input.tar.gz
[2025-11-27 08:29:47] -rw-r--r-- 1 boinc boinc      6729 Nov 27 01:27 init_data.xml
[2025-11-27 08:29:47] -rw-r--r-- 2 boinc boinc 407984924 Nov 27 01:27 EVNT.47493065._000396.pool.root.1
[2025-11-27 08:29:47] -rw-r--r-- 1 boinc boinc         0 Nov 27 01:27 boinc_lockfile
[2025-11-27 08:29:47] -rw-r--r-- 1 boinc boinc      2770 Nov 27 01:27 pandaJob.out
[2025-11-27 08:29:47] -rw------- 1 boinc boinc    991546 Nov 27 01:28 agis_schedconf.cvmfs.json
[2025-11-27 08:29:47] drwx------ 5 boinc boinc      4096 Nov 27 01:28 pilot3
[2025-11-27 08:29:47] -rw-r--r-- 1 boinc boinc       532 Nov 27 05:20 boinc_task_state.xml
[2025-11-27 08:29:47] -rw------- 1 boinc boinc 918979954 Nov 27 05:25 HITS.47493068._003951.pool.root.1
[2025-11-27 08:29:47] -rw------- 1 boinc boinc        95 Nov 27 05:25 pilot_heartbeat.json
[2025-11-27 08:29:47] -rw------- 1 boinc boinc      1027 Nov 27 05:26 memory_monitor_summary.json
[2025-11-27 08:29:47] -rw------- 1 boinc boinc   1516240 Nov 27 05:26 agis_ddmendpoints.agis.ALL.json
[2025-11-27 08:29:47] -rw------- 1 boinc boinc   1962809 Nov 27 05:26 log.47493068._003951.job.log.tgz.1
[2025-11-27 08:29:47] -rw------- 1 boinc boinc      8619 Nov 27 05:26 heartbeat.json
[2025-11-27 08:29:47] -rw------- 1 boinc boinc      4560 Nov 27 05:26 pilotlog.txt
[2025-11-27 08:29:47] -rw------- 1 boinc boinc   2037610 Nov 27 05:26 log.47493068._003951.job.log.1
[2025-11-27 08:29:47] -rw------- 1 boinc boinc       353 Nov 27 05:26 output.list
[2025-11-27 08:29:47] -rw-r--r-- 1 boinc boinc       620 Nov 27 05:26 runtime_log
[2025-11-27 08:29:47] -rw------- 1 boinc boinc   4024320 Nov 27 05:26 result.tar.gz
[2025-11-27 08:29:47] -rw-r--r-- 1 boinc boinc      9005 Nov 27 05:26 runtime_log.err
[2025-11-27 08:29:47] -rw------- 1 boinc boinc       714 Nov 27 05:26 D5iKDmG4df8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4tFKDmkNL6Do.diag
[2025-11-27 08:29:47] -rw-r--r-- 1 boinc boinc      8192 Nov 27 08:29 boinc_mmap_file
[2025-11-27 08:29:47] -rw-r--r-- 1 boinc boinc        28 Nov 27 08:29 wrapper_checkpoint.txt
[2025-11-27 08:29:47] -rw-r--r-- 1 boinc boinc     21475 Nov 27 08:29 stderr.txt
[2025-11-27 08:29:47] HITS file was successfully produced:
[2025-11-27 08:29:47] -rw------- 1 boinc boinc 918979954 Nov 27 05:25 shared/HITS.pool.root.1
[2025-11-27 08:29:47]  *** Contents of shared directory: ***
[2025-11-27 08:29:47] total 1300404
[2025-11-27 08:29:47] -rw-r--r-- 2 boinc boinc     15120 Nov 27 01:27 start_atlas.sh
[2025-11-27 08:29:47] -rw-r--r-- 2 boinc boinc    590093 Nov 27 01:27 input.tar.gz
[2025-11-27 08:29:47] -rw-r--r-- 2 boinc boinc 407984924 Nov 27 01:27 ATLAS.root_0
[2025-11-27 08:29:47] -rw------- 1 boinc boinc 918979954 Nov 27 05:25 HITS.pool.root.1
[2025-11-27 08:29:47] -rw------- 1 boinc boinc   4024320 Nov 27 05:26 result.tar.gz
08:29:49 (1205537): run_atlas exited; CPU time 162361.860061
08:29:49 (1205537): called boinc_finish(0)

</stderr_txt>
]]>

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