Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:01:10 (19456): wrapper (7.7.26015): starting
04:01:10 (19456): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 04:01:10] Arguments: --nthreads 12
[2025-11-26 04:01:10] Threads: 12
[2025-11-26 04:01:10] Checking for CVMFS
[2025-11-26 04:01:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 04:01:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 04:01:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 04:01:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 04:01:11] 2.11.2.0 2933 287475 91316 153315 1 81 18954984 20275201 1 130560 2 128765960 99.962 17199762 14718 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 04:01:11] CVMFS is ok
[2025-11-26 04:01:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 04:01:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 04:01:11] Further information can be found at the LHC@home message board.
[2025-11-26 04:01:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 04:01:11] Checking for apptainer binary...
[2025-11-26 04:01:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 04:01:11] Running /usr/bin/apptainer --version
[2025-11-26 04:01:11] apptainer version 1.3.2-1.el7
[2025-11-26 04:01:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 04:01:12] c-205-15.aglt2.org
[2025-11-26 04:01:12] apptainer works
[2025-11-26 04:01:12] Set ATHENA_PROC_NUMBER=12
[2025-11-26 04:01:12] Set ATHENA_CORE_NUMBER=12
[2025-11-26 04:01:12] Starting ATLAS job with PandaID=6896254707
[2025-11-26 04:01:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 11:08:15]  *** The last 200 lines of the pilot log: ***
[2025-11-26 11:08:15] 2025-11-26 16:07:17,524 | INFO     | time since job start (25550s) is within the limit (172800.0s)
[2025-11-26 11:08:15] 2025-11-26 16:07:19,049 | INFO     | monitor loop #1907: job 0:6896254707 is in state 'finished'
[2025-11-26 11:08:15] 2025-11-26 16:07:19,049 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 11:08:15] 2025-11-26 16:07:19,452 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 11:08:15] 2025-11-26 16:07:19,456 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-11-26 11:08:15] 2025-11-26 16:07:19,458 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896254707/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 11:08:15] 2025-11-26 16:07:19,459 | INFO     | extracted standard info from prmon json
[2025-11-26 11:08:15] 2025-11-26 16:07:19,459 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 11:08:15] 2025-11-26 16:07:19,459 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 11:08:15] 2025-11-26 16:07:19,467 | INFO     | fitting pss+swap vs Time
[2025-11-26 11:08:15] 2025-11-26 16:07:19,467 | INFO     | sum of square deviations: 22809600529.875828
[2025-11-26 11:08:15] 2025-11-26 16:07:19,471 | INFO     | sum of deviations: 371721673693.0809
[2025-11-26 11:08:15] 2025-11-26 16:07:19,471 | INFO     | mean x: 1764160465.3389022
[2025-11-26 11:08:15] 2025-11-26 16:07:19,471 | INFO     | mean y: 3430891.3937947494
[2025-11-26 11:08:15] 2025-11-26 16:07:19,472 | INFO     | intersect: -28746598289.52107
[2025-11-26 11:08:15] 2025-11-26 16:07:19,472 | INFO     | chi2: 5.8932994830085885
[2025-11-26 11:08:15] 2025-11-26 16:07:19,473 | INFO     | sum of square deviations: 22002772896.79456
[2025-11-26 11:08:15] 2025-11-26 16:07:19,476 | INFO     | sum of deviations: 540547601049.83105
[2025-11-26 11:08:15] 2025-11-26 16:07:19,476 | INFO     | mean x: 1764160312.8429952
[2025-11-26 11:08:15] 2025-11-26 16:07:19,477 | INFO     | mean y: 3462771.458937198
[2025-11-26 11:08:15] 2025-11-26 16:07:19,477 | INFO     | intersect: -43337102958.48713
[2025-11-26 11:08:15] 2025-11-26 16:07:19,477 | INFO     | chi2: 2.596323176409024
[2025-11-26 11:08:15] 2025-11-26 16:07:19,477 | INFO     | current chi2=2.596323176409024 (change=55.94448943423498 %)
[2025-11-26 11:08:15] 2025-11-26 16:07:19,478 | INFO     | sum of square deviations: 21215201438.699326
[2025-11-26 11:08:15] 2025-11-26 16:07:19,481 | INFO     | sum of deviations: 573424064848.9583
[2025-11-26 11:08:15] 2025-11-26 16:07:19,482 | INFO     | mean x: 1764160160.3471882
[2025-11-26 11:08:15] 2025-11-26 16:07:19,482 | INFO     | mean y: 3469094.0073349634
[2025-11-26 11:08:15] 2025-11-26 16:07:19,482 | INFO     | intersect: -47679881597.42477
[2025-11-26 11:08:15] 2025-11-26 16:07:19,482 | INFO     | chi2: 2.2622774120218114
[2025-11-26 11:08:15] 2025-11-26 16:07:19,482 | INFO     | current chi2=2.2622774120218114 (change=12.866108788861624 %)
[2025-11-26 11:08:15] 2025-11-26 16:07:19,482 | INFO     | right removable region: 408
[2025-11-26 11:08:15] 2025-11-26 16:07:19,483 | INFO     | sum of square deviations: 22002711591.478226
[2025-11-26 11:08:15] 2025-11-26 16:07:19,487 | INFO     | sum of deviations: 245000614846.73907
[2025-11-26 11:08:15] 2025-11-26 16:07:19,487 | INFO     | mean x: 1764160617.8405797
[2025-11-26 11:08:15] 2025-11-26 16:07:19,487 | INFO     | mean y: 3454752.920289855
[2025-11-26 11:08:15] 2025-11-26 16:07:19,487 | INFO     | intersect: -19640507504.29289
[2025-11-26 11:08:15] 2025-11-26 16:07:19,487 | INFO     | chi2: 3.8006864876502813
[2025-11-26 11:08:15] 2025-11-26 16:07:19,488 | INFO     | current chi2=3.8006864876502813 (change=35.50834301551577 %)
[2025-11-26 11:08:15] 2025-11-26 16:07:19,488 | INFO     | sum of square deviations: 21215129701.437557
[2025-11-26 11:08:15] 2025-11-26 16:07:19,492 | INFO     | sum of deviations: 214555887550.6548
[2025-11-26 11:08:15] 2025-11-26 16:07:19,492 | INFO     | mean x: 1764160770.3374083
[2025-11-26 11:08:15] 2025-11-26 16:07:19,492 | INFO     | mean y: 3460640.806845966
[2025-11-26 11:08:15] 2025-11-26 16:07:19,492 | INFO     | intersect: -17838102676.910755
[2025-11-26 11:08:15] 2025-11-26 16:07:19,492 | INFO     | chi2: 3.7589552107940376
[2025-11-26 11:08:15] 2025-11-26 16:07:19,493 | INFO     | current chi2=3.7589552107940376 (change=1.09799313865647 %)
[2025-11-26 11:08:15] 2025-11-26 16:07:19,493 | INFO     | left removable region: 20
[2025-11-26 11:08:15] 2025-11-26 16:07:19,493 | INFO     | sum of square deviations: 18112233731.33011
[2025-11-26 11:08:15] 2025-11-26 16:07:19,496 | INFO     | sum of deviations: 364778430759.0616
[2025-11-26 11:08:15] 2025-11-26 16:07:19,497 | INFO     | mean x: 1764160739.8505154
[2025-11-26 11:08:15] 2025-11-26 16:07:19,497 | INFO     | mean y: 3510333.1907216497
[2025-11-26 11:08:15] 2025-11-26 16:07:19,497 | INFO     | intersect: -35526496392.38819
[2025-11-26 11:08:15] 2025-11-26 16:07:19,497 | INFO     | chi2: 0.06240259940866734
[2025-11-26 11:08:15] 2025-11-26 16:07:19,497 | INFO     | current memory leak: 20.14 B/s (using 388 data points, chi2=0.06)
[2025-11-26 11:08:15] 2025-11-26 16:07:19,498 | INFO     | could have reported an average CPU frequency of 2393 MHz (18 samples)
[2025-11-26 11:08:15] 2025-11-26 16:07:19,498 | INFO     | ..............................
[2025-11-26 11:08:15] 2025-11-26 16:07:19,498 | INFO     | . Timing measurements:
[2025-11-26 11:08:15] 2025-11-26 16:07:19,498 | INFO     | . get job = 0 s
[2025-11-26 11:08:15] 2025-11-26 16:07:19,498 | INFO     | . initial setup = 2 s
[2025-11-26 11:08:15] 2025-11-26 16:07:19,499 | INFO     | . payload setup = 7 s
[2025-11-26 11:08:15] 2025-11-26 16:07:19,499 | INFO     | . stage-in = 0 s
[2025-11-26 11:08:15] 2025-11-26 16:07:19,499 | INFO     | . payload execution = 25514 s
[2025-11-26 11:08:15] 2025-11-26 16:07:19,499 | INFO     | . stage-out = 3 s
[2025-11-26 11:08:15] 2025-11-26 16:07:19,499 | INFO     | . log creation = 0 s
[2025-11-26 11:08:15] 2025-11-26 16:07:19,499 | INFO     | ..............................
[2025-11-26 11:08:15] 2025-11-26 16:07:19,534 | INFO     | time since job start (25552s) is within the limit (172800.0s)
[2025-11-26 11:08:15] 2025-11-26 16:07:19,951 | INFO     | 
[2025-11-26 11:08:15] 2025-11-26 16:07:19,952 | INFO     | job summary report
[2025-11-26 11:08:15] 2025-11-26 16:07:19,952 | INFO     | --------------------------------------------------
[2025-11-26 11:08:15] 2025-11-26 16:07:19,952 | INFO     | PanDA job id: 6896254707
[2025-11-26 11:08:15] 2025-11-26 16:07:19,952 | INFO     | task id: 47556149
[2025-11-26 11:08:15] 2025-11-26 16:07:19,952 | INFO     | errors: (none)
[2025-11-26 11:08:15] 2025-11-26 16:07:19,953 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 11:08:15] 2025-11-26 16:07:19,953 | INFO     | pilot state: finished 
[2025-11-26 11:08:15] 2025-11-26 16:07:19,953 | INFO     | transexitcode: 0
[2025-11-26 11:08:15] 2025-11-26 16:07:19,953 | INFO     | exeerrorcode: 0
[2025-11-26 11:08:15] 2025-11-26 16:07:19,953 | INFO     | exeerrordiag: 
[2025-11-26 11:08:15] 2025-11-26 16:07:19,953 | INFO     | exitcode: 0
[2025-11-26 11:08:15] 2025-11-26 16:07:19,953 | INFO     | exitmsg: OK
[2025-11-26 11:08:15] 2025-11-26 16:07:19,954 | INFO     | cpuconsumptiontime: 293820 s
[2025-11-26 11:08:15] 2025-11-26 16:07:19,954 | INFO     | nevents: 1000
[2025-11-26 11:08:15] 2025-11-26 16:07:19,954 | INFO     | neventsw: 0
[2025-11-26 11:08:15] 2025-11-26 16:07:19,954 | INFO     | pid: 29540
[2025-11-26 11:08:15] 2025-11-26 16:07:19,954 | INFO     | pgrp: 29540
[2025-11-26 11:08:15] 2025-11-26 16:07:19,954 | INFO     | corecount: 12
[2025-11-26 11:08:15] 2025-11-26 16:07:19,955 | INFO     | event service: False
[2025-11-26 11:08:15] 2025-11-26 16:07:19,955 | INFO     | sizes: {0: 2284308, 5: 2284570, 11: 2284626, 25525: 2321748, 25529: 2330742, 25531: 2330798, 25536: 2331172}
[2025-11-26 11:08:15] 2025-11-26 16:07:19,955 | INFO     | --------------------------------------------------
[2025-11-26 11:08:15] 2025-11-26 16:07:19,955 | INFO     | 
[2025-11-26 11:08:15] 2025-11-26 16:07:19,955 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 11:08:15] 2025-11-26 16:07:19,980 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 11:08:15] 2025-11-26 16:07:19,980 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 11:08:15] 2025-11-26 16:07:19,981 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 11:08:15] 2025-11-26 16:07:19,981 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 11:08:15] 2025-11-26 16:07:19,981 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 11:08:15] 2025-11-26 16:07:19,981 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 11:08:15] 2025-11-26 16:07:19,981 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 11:08:15] 2025-11-26 16:07:19,981 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 11:08:15] 2025-11-26 16:07:19,982 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 11:08:15] 2025-11-26 16:07:19,982 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 11:08:15] 2025-11-26 16:07:19,982 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 11:08:15] 2025-11-26 16:07:19,982 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 11:08:15] 2025-11-26 16:07:19,982 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 11:08:15] 2025-11-26 16:07:19,983 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 11:08:15] 2025-11-26 16:07:19,983 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 11:08:15] 2025-11-26 16:07:19,983 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 11:08:15] 2025-11-26 16:07:19,983 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 11:08:15] 2025-11-26 16:07:19,983 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 11:08:15] 2025-11-26 16:07:19,983 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 11:08:15] 2025-11-26 16:07:19,984 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 11:08:15] 2025-11-26 16:07:19,984 | INFO     | job 6896254707 has completed (purged errors)
[2025-11-26 11:08:15] 2025-11-26 16:07:19,984 | INFO     | overall cleanup function is called
[2025-11-26 11:08:15] 2025-11-26 16:07:20,999 | INFO     | --- collectZombieJob: --- 10, [29540]
[2025-11-26 11:08:15] 2025-11-26 16:07:20,999 | INFO     | zombie collector waiting for pid 29540
[2025-11-26 11:08:15] 2025-11-26 16:07:20,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 11:08:15] 2025-11-26 16:07:21,000 | INFO     | collected zombie processes
[2025-11-26 11:08:15] 2025-11-26 16:07:21,000 | INFO     | will attempt to kill all subprocesses of pid=29540
[2025-11-26 11:08:15] 2025-11-26 16:07:21,091 | INFO     | process IDs to be killed: [29540] (in reverse order)
[2025-11-26 11:08:15] 2025-11-26 16:07:21,143 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 11:08:15] 2025-11-26 16:07:21,143 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 11:08:15] 2025-11-26 16:07:21,147 | INFO     | did not find any defunct processes belonging to 29540
[2025-11-26 11:08:15] 2025-11-26 16:07:21,150 | INFO     | did not find any defunct processes belonging to 29540
[2025-11-26 11:08:15] 2025-11-26 16:07:21,152 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 11:08:15] 2025-11-26 16:07:21,152 | INFO     | ready for new job
[2025-11-26 11:08:15] 2025-11-26 16:07:21,153 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 11:08:15] 2025-11-26 16:07:21,155 | INFO     | ***************************************
[2025-11-26 11:08:15] 2025-11-26 16:07:21,155 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 11:08:15] 2025-11-26 16:07:21,155 | INFO     | ***************************************
[2025-11-26 11:08:15] 2025-11-26 16:07:21,156 | INFO     | 
[2025-11-26 11:08:15] 2025-11-26 16:07:21,156 | INFO     | architecture information:
[2025-11-26 11:08:15] 2025-11-26 16:07:21,157 | INFO     | executing command: cat /etc/os-release
[2025-11-26 11:08:15] 2025-11-26 16:07:21,172 | INFO     | cat /etc/os-release:
[2025-11-26 11:08:15] NAME="CentOS Linux"
[2025-11-26 11:08:15] VERSION="7 (Core)"
[2025-11-26 11:08:15] ID="centos"
[2025-11-26 11:08:15] ID_LIKE="rhel fedora"
[2025-11-26 11:08:15] VERSION_ID="7"
[2025-11-26 11:08:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 11:08:15] ANSI_COLOR="0;31"
[2025-11-26 11:08:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 11:08:15] HOME_URL="https://www.centos.org/"
[2025-11-26 11:08:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 11:08:15] 
[2025-11-26 11:08:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 11:08:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 11:08:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 11:08:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 11:08:15] 
[2025-11-26 11:08:15] 2025-11-26 16:07:21,173 | INFO     | ***************************************
[2025-11-26 11:08:15] 2025-11-26 16:07:21,676 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 11:08:15] 2025-11-26 16:07:21,692 | INFO     | sufficient remaining disk space (28237103104 B)
[2025-11-26 11:08:15] 2025-11-26 16:07:21,693 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 11:08:15] 2025-11-26 16:07:21,693 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 11:08:15] 2025-11-26 16:07:21,693 | INFO     | update_server=False
[2025-11-26 11:08:15] 2025-11-26 16:07:21,693 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 11:08:15] 2025-11-26 16:07:21,810 | INFO     | all data control threads have been joined
[2025-11-26 11:08:15] 2025-11-26 16:07:21,909 | INFO     | all payload control threads have been joined
[2025-11-26 11:08:15] 2025-11-26 16:07:22,561 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:08:15] 2025-11-26 16:07:22,561 | INFO     | aborting loop
[2025-11-26 11:08:15] 2025-11-26 16:07:22,697 | INFO     | [job] retrieve thread has finished
[2025-11-26 11:08:15] 2025-11-26 16:07:22,701 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 11:08:15] 2025-11-26 16:07:22,815 | INFO     | [data] control thread has finished
[2025-11-26 11:08:15] 2025-11-26 16:07:22,915 | INFO     | [payload] control thread has finished
[2025-11-26 11:08:15] 2025-11-26 16:07:22,933 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 11:08:15] 2025-11-26 16:07:23,048 | INFO     | [data] copytool_in thread has finished
[2025-11-26 11:08:15] 2025-11-26 16:07:23,196 | INFO     | all job control threads have been joined
[2025-11-26 11:08:15] 2025-11-26 16:07:23,254 | INFO     | [payload] failed_post thread has finished
[2025-11-26 11:08:15] 2025-11-26 16:07:23,279 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 11:08:15] 2025-11-26 16:07:23,566 | INFO     | [job] job monitor thread has finished
[2025-11-26 11:08:15] 2025-11-26 16:07:23,646 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 11:08:15] 2025-11-26 16:07:23,715 | INFO     | [job] validate thread has finished
[2025-11-26 11:08:15] 2025-11-26 16:07:24,048 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 11:08:15] 2025-11-26 16:07:24,202 | INFO     | [job] control thread has finished
[2025-11-26 11:08:15] 2025-11-26 16:07:24,226 | INFO     | [payload] validate_post thread has finished
[2025-11-26 11:08:15] 2025-11-26 16:07:24,598 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:08:15] 2025-11-26 16:07:24,938 | INFO     | [data] copytool_out thread has finished
[2025-11-26 11:08:15] 2025-11-26 16:07:25,007 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 11:08:15] 2025-11-26 16:07:25,603 | INFO     | [job] queue monitor thread has finished
[2025-11-26 11:08:15] 2025-11-26 16:07:29,013 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 11:08:15] 2025-11-26 16:07:52,742 | INFO     | PID=23156 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 11:08:15] 2025-11-26 16:07:52,743 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 11:08:15] 2025-11-26 16:07:52,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 11:08:15] 2025-11-26 16:07:52,743 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 11:08:15] 2025-11-26 16:08:09,009 | INFO     | [monitor] cgroup control has ended
[2025-11-26 11:08:15] 2025-11-26 16:08:10,345 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139857742214976)>', '<ExcThread(monitor, started 139856994879232)>']
[2025-11-26 11:08:15] 2025-11-26 16:08:10,828 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 11:08:15] 2025-11-26 16:08:10,828 | INFO     | [monitor] control thread has ended
[2025-11-26 11:08:15] 2025-11-26 16:08:15,370 | INFO     | all workflow threads have been joined
[2025-11-26 11:08:15] 2025-11-26 16:08:15,370 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 11:08:15] 2025-11-26 16:08:15,371 | INFO     | traces error code: 0
[2025-11-26 11:08:15] 2025-11-26 16:08:15,371 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 11:08:15] 2025-11-26 16:08:15,467 [wrapper] ==== pilot stdout END ====
[2025-11-26 11:08:15] 2025-11-26 16:08:15,471 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 11:08:15] 2025-11-26 16:08:15,474 [wrapper] pilotpid: 23156
[2025-11-26 11:08:15] 2025-11-26 16:08:15,478 [wrapper] Pilot exit status: 0
[2025-11-26 11:08:15] 2025-11-26 16:08:15,491 [wrapper] pandaids: 6896254707
[2025-11-26 11:08:15] 2025-11-26 16:08:15,538 [wrapper] cleanup supervisor_pilot 30029 23157
[2025-11-26 11:08:15] 2025-11-26 16:08:15,542 [wrapper] Test setup, not cleaning
[2025-11-26 11:08:15] 2025-11-26 16:08:15,546 [wrapper] apfmon messages muted
[2025-11-26 11:08:15] 2025-11-26 16:08:15,550 [wrapper] ==== wrapper stdout END ====
[2025-11-26 11:08:15] 2025-11-26 16:08:15,554 [wrapper] ==== wrapper stderr END ====
[2025-11-26 11:08:15]  *** Error codes and diagnostics ***
[2025-11-26 11:08:15]     "exeErrorCode": 0,
[2025-11-26 11:08:15]     "exeErrorDiag": "",
[2025-11-26 11:08:15]     "pilotErrorCode": 0,
[2025-11-26 11:08:15]     "pilotErrorDiag": "",
[2025-11-26 11:08:15]  *** Listing of results directory ***
[2025-11-26 11:08:15] total 1323104
[2025-11-26 11:08:15] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 17:04 pilot3.tar.gz
[2025-11-26 11:08:15] -rwx------ 1 boincer umatlas     36292 Nov 24 17:16 runpilot2-wrapper.sh
[2025-11-26 11:08:15] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 17:16 queuedata.json
[2025-11-26 11:08:15] -rw-r--r-- 1 boincer umatlas       100 Nov 26 04:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 11:08:15] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 04:01 run_atlas
[2025-11-26 11:08:15] -rw-r--r-- 1 boincer umatlas       105 Nov 26 04:01 job.xml
[2025-11-26 11:08:15] -rw-r--r-- 2 boincer umatlas 409393694 Nov 26 04:01 EVNT.47483658._001429.pool.root.1
[2025-11-26 11:08:15] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 04:01 start_atlas.sh
[2025-11-26 11:08:15] drwxrwx--x 2 boincer umatlas      4096 Nov 26 04:01 shared
[2025-11-26 11:08:15] -rw-r--r-- 2 boincer umatlas    590099 Nov 26 04:01 input.tar.gz
[2025-11-26 11:08:15] -rw-r--r-- 1 boincer umatlas         0 Nov 26 04:01 boinc_lockfile
[2025-11-26 11:08:15] -rw-r--r-- 1 boincer umatlas      2782 Nov 26 04:01 pandaJob.out
[2025-11-26 11:08:15] -rw------- 1 boincer umatlas        57 Nov 26 04:01 setup.sh.local
[2025-11-26 11:08:15] -rw------- 1 boincer umatlas    991877 Nov 26 04:01 agis_schedconf.cvmfs.json
[2025-11-26 11:08:15] drwx------ 5 boincer umatlas      4096 Nov 26 04:01 pilot3
[2025-11-26 11:08:15] -rw-r--r-- 1 boincer umatlas       532 Nov 26 10:58 boinc_task_state.xml
[2025-11-26 11:08:15] -rw-r--r-- 1 boincer umatlas      5956 Nov 26 11:03 init_data.xml
[2025-11-26 11:08:15] -rw------- 1 boincer umatlas 930077869 Nov 26 11:06 HITS.47556149._004151.pool.root.1
[2025-11-26 11:08:15] -rw------- 1 boincer umatlas      1064 Nov 26 11:07 memory_monitor_summary.json
[2025-11-26 11:08:15] -rw------- 1 boincer umatlas   1516240 Nov 26 11:07 agis_ddmendpoints.agis.ALL.json
[2025-11-26 11:08:15] -rw------- 1 boincer umatlas   2165179 Nov 26 11:07 log.47556149._004151.job.log.tgz.1
[2025-11-26 11:08:15] -rw------- 1 boincer umatlas      8662 Nov 26 11:07 heartbeat.json
[2025-11-26 11:08:15] -rw------- 1 boincer umatlas        95 Nov 26 11:07 pilot_heartbeat.json
[2025-11-26 11:08:15] -rw-r--r-- 1 boincer umatlas        29 Nov 26 11:08 wrapper_checkpoint.txt
[2025-11-26 11:08:15] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 11:08 boinc_mmap_file
[2025-11-26 11:08:15] -rw------- 1 boincer umatlas      4746 Nov 26 11:08 pilotlog.txt
[2025-11-26 11:08:15] -rw------- 1 boincer umatlas   3571580 Nov 26 11:08 log.47556149._004151.job.log.1
[2025-11-26 11:08:15] -rw------- 1 boincer umatlas       353 Nov 26 11:08 output.list
[2025-11-26 11:08:15] -rw-r--r-- 1 boincer umatlas       620 Nov 26 11:08 runtime_log
[2025-11-26 11:08:15] -rw------- 1 boincer umatlas   5754880 Nov 26 11:08 result.tar.gz
[2025-11-26 11:08:15] -rw-r--r-- 1 boincer umatlas      9345 Nov 26 11:08 runtime_log.err
[2025-11-26 11:08:15] -rw------- 1 boincer umatlas       670 Nov 26 11:08 pgjMDmn2th8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCxLKDmHlJUUn.diag
[2025-11-26 11:08:15] -rw-r--r-- 1 boincer umatlas     21326 Nov 26 11:08 stderr.txt
[2025-11-26 11:08:15] HITS file was successfully produced:
[2025-11-26 11:08:15] -rw------- 1 boincer umatlas 930077869 Nov 26 11:06 shared/HITS.pool.root.1
[2025-11-26 11:08:15]  *** Contents of shared directory: ***
[2025-11-26 11:08:15] total 1314300
[2025-11-26 11:08:15] -rw-r--r-- 2 boincer umatlas 409393694 Nov 26 04:01 ATLAS.root_0
[2025-11-26 11:08:15] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 04:01 start_atlas.sh
[2025-11-26 11:08:15] -rw-r--r-- 2 boincer umatlas    590099 Nov 26 04:01 input.tar.gz
[2025-11-26 11:08:15] -rw------- 1 boincer umatlas 930077869 Nov 26 11:06 HITS.pool.root.1
[2025-11-26 11:08:15] -rw------- 1 boincer umatlas   5754880 Nov 26 11:08 result.tar.gz
11:08:16 (19456): run_atlas exited; CPU time 287774.128248
11:08:16 (19456): called boinc_finish(0)

</stderr_txt>
]]>

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