Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:41:20 (11221): wrapper (7.7.26015): starting
03:41:20 (11221): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 03:41:20] Arguments: --nthreads 8
[2025-11-26 03:41:20] Threads: 8
[2025-11-26 03:41:20] Checking for CVMFS
[2025-11-26 03:41:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 03:41:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 03:41:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 03:41:21] /usr/bin/cvmfs_config: line 944: cd: /cvmfs/ligo.storage.igwn.org: Permission denied
[2025-11-26 03:41:21] 
[2025-11-26 03:41:21] CVMFS is ok
[2025-11-26 03:41:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 03:41:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 03:41:21] Further information can be found at the LHC@home message board.
[2025-11-26 03:41:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 03:41:21] Checking for apptainer binary...
[2025-11-26 03:41:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 03:41:21] Running /usr/bin/apptainer --version
[2025-11-26 03:41:21] apptainer version 1.3.2-1.el7
[2025-11-26 03:41:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 03:41:22] c-9-34.aglt2.org
[2025-11-26 03:41:22] apptainer works
[2025-11-26 03:41:22] Set ATHENA_PROC_NUMBER=8
[2025-11-26 03:41:22] Set ATHENA_CORE_NUMBER=8
[2025-11-26 03:41:22] Starting ATLAS job with PandaID=6896766826
[2025-11-26 03:41:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 20:47:22]  *** The last 200 lines of the pilot log: ***
[2025-11-26 20:47:22] 2025-11-27 01:46:18,627 | INFO     | monitor loop #4248: job 0:6896766826 is in state 'finished'
[2025-11-26 20:47:22] 2025-11-27 01:46:18,627 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:47:22] 2025-11-27 01:46:19,822 | INFO     | time since job start (61486s) is within the limit (172800.0s)
[2025-11-26 20:47:22] 2025-11-27 01:46:20,111 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 20:47:22] 2025-11-27 01:46:20,115 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2999.8920625000014
[2025-11-26 20:47:22] 2025-11-27 01:46:20,118 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6896766826/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 20:47:22] 2025-11-27 01:46:20,119 | INFO     | extracted standard info from prmon json
[2025-11-26 20:47:22] 2025-11-27 01:46:20,119 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 20:47:22] 2025-11-27 01:46:20,119 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 20:47:22] 2025-11-27 01:46:20,131 | INFO     | fitting pss+swap vs Time
[2025-11-26 20:47:22] 2025-11-27 01:46:20,132 | INFO     | sum of square deviations: 317582898525.5625
[2025-11-26 20:47:22] 2025-11-27 01:46:20,154 | INFO     | sum of deviations: 1570819430760.9363
[2025-11-26 20:47:22] 2025-11-27 01:46:20,154 | INFO     | mean x: 1764177234.1875
[2025-11-26 20:47:22] 2025-11-27 01:46:20,154 | INFO     | mean y: 2864851.1537698414
[2025-11-26 20:47:22] 2025-11-27 01:46:20,154 | INFO     | intersect: -8723058023.263083
[2025-11-26 20:47:22] 2025-11-27 01:46:20,156 | INFO     | chi2: 5.4756322892147
[2025-11-26 20:47:22] 2025-11-27 01:46:20,157 | INFO     | sum of square deviations: 312880547298.18774
[2025-11-26 20:47:22] 2025-11-27 01:46:20,183 | INFO     | sum of deviations: 1890417708765.097
[2025-11-26 20:47:22] 2025-11-27 01:46:20,183 | INFO     | mean x: 1764177081.6909273
[2025-11-26 20:47:22] 2025-11-27 01:46:20,183 | INFO     | mean y: 2875210.735792622
[2025-11-26 20:47:22] 2025-11-27 01:46:20,183 | INFO     | intersect: -10656245739.49586
[2025-11-26 20:47:22] 2025-11-27 01:46:20,184 | INFO     | chi2: 2.5224822144223475
[2025-11-26 20:47:22] 2025-11-27 01:46:20,184 | INFO     | current chi2=2.5224822144223475 (change=53.93258565972634 %)
[2025-11-26 20:47:22] 2025-11-27 01:46:20,185 | INFO     | sum of square deviations: 308224848108.2888
[2025-11-26 20:47:22] 2025-11-27 01:46:20,200 | INFO     | sum of deviations: 2008977622547.7642
[2025-11-26 20:47:22] 2025-11-27 01:46:20,200 | INFO     | mean x: 1764176929.1943889
[2025-11-26 20:47:22] 2025-11-27 01:46:20,201 | INFO     | mean y: 2879091.279559118
[2025-11-26 20:47:22] 2025-11-27 01:46:20,201 | INFO     | intersect: -11495843333.985052
[2025-11-26 20:47:22] 2025-11-27 01:46:20,201 | INFO     | chi2: 1.998324303527456
[2025-11-26 20:47:22] 2025-11-27 01:46:20,201 | INFO     | current chi2=1.998324303527456 (change=20.779449222595392 %)
[2025-11-26 20:47:22] 2025-11-27 01:46:20,202 | INFO     | right removable region: 997
[2025-11-26 20:47:22] 2025-11-27 01:46:20,202 | INFO     | sum of square deviations: 312880124568.18756
[2025-11-26 20:47:22] 2025-11-27 01:46:20,218 | INFO     | sum of deviations: 1342706453629.9622
[2025-11-26 20:47:22] 2025-11-27 01:46:20,218 | INFO     | mean x: 1764177386.6909273
[2025-11-26 20:47:22] 2025-11-27 01:46:20,218 | INFO     | mean y: 2872236.0837487536
[2025-11-26 20:47:22] 2025-11-27 01:46:20,218 | INFO     | intersect: -7567990137.252179
[2025-11-26 20:47:22] 2025-11-27 01:46:20,219 | INFO     | chi2: 3.722484354663666
[2025-11-26 20:47:22] 2025-11-27 01:46:20,219 | INFO     | current chi2=3.722484354663666 (change=32.01726927507884 %)
[2025-11-26 20:47:22] 2025-11-27 01:46:20,220 | INFO     | sum of square deviations: 308224369624.58545
[2025-11-26 20:47:22] 2025-11-27 01:46:20,235 | INFO     | sum of deviations: 1280784441660.8784
[2025-11-26 20:47:22] 2025-11-27 01:46:20,235 | INFO     | mean x: 1764177539.1883767
[2025-11-26 20:47:22] 2025-11-27 01:46:20,235 | INFO     | mean y: 2874263.851703407
[2025-11-26 20:47:22] 2025-11-27 01:46:20,235 | INFO     | intersect: -7327925527.456609
[2025-11-26 20:47:22] 2025-11-27 01:46:20,236 | INFO     | chi2: 3.6781694733046173
[2025-11-26 20:47:22] 2025-11-27 01:46:20,236 | INFO     | current chi2=3.6781694733046173 (change=1.1904652145422585 %)
[2025-11-26 20:47:22] 2025-11-27 01:46:20,236 | INFO     | left removable region: 20
[2025-11-26 20:47:22] 2025-11-27 01:46:20,237 | INFO     | sum of square deviations: 289174079589.9237
[2025-11-26 20:47:22] 2025-11-27 01:46:20,251 | INFO     | sum of deviations: 1647512937531.1172
[2025-11-26 20:47:22] 2025-11-27 01:46:20,252 | INFO     | mean x: 1764177508.6980553
[2025-11-26 20:47:22] 2025-11-27 01:46:20,252 | INFO     | mean y: 2891617.430910952
[2025-11-26 20:47:22] 2025-11-27 01:46:20,252 | INFO     | intersect: -10048165772.647623
[2025-11-26 20:47:22] 2025-11-27 01:46:20,253 | INFO     | chi2: 0.15865530661353627
[2025-11-26 20:47:22] 2025-11-27 01:46:20,253 | INFO     | current memory leak: 5.70 B/s (using 977 data points, chi2=0.16)
[2025-11-26 20:47:22] 2025-11-27 01:46:20,253 | INFO     | could have reported an average CPU frequency of 2999 MHz (37 samples)
[2025-11-26 20:47:22] 2025-11-27 01:46:20,254 | INFO     | ..............................
[2025-11-26 20:47:22] 2025-11-27 01:46:20,254 | INFO     | . Timing measurements:
[2025-11-26 20:47:22] 2025-11-27 01:46:20,254 | INFO     | . get job = 0 s
[2025-11-26 20:47:22] 2025-11-27 01:46:20,254 | INFO     | . initial setup = 2 s
[2025-11-26 20:47:22] 2025-11-27 01:46:20,254 | INFO     | . payload setup = 5 s
[2025-11-26 20:47:22] 2025-11-27 01:46:20,254 | INFO     | . stage-in = 0 s
[2025-11-26 20:47:22] 2025-11-27 01:46:20,254 | INFO     | . payload execution = 61451 s
[2025-11-26 20:47:22] 2025-11-27 01:46:20,254 | INFO     | . stage-out = 3 s
[2025-11-26 20:47:22] 2025-11-27 01:46:20,254 | INFO     | . log creation = 0 s
[2025-11-26 20:47:22] 2025-11-27 01:46:20,254 | INFO     | ..............................
[2025-11-26 20:47:22] 2025-11-27 01:46:20,321 | INFO     | 
[2025-11-26 20:47:22] 2025-11-27 01:46:20,321 | INFO     | job summary report
[2025-11-26 20:47:22] 2025-11-27 01:46:20,321 | INFO     | --------------------------------------------------
[2025-11-26 20:47:22] 2025-11-27 01:46:20,321 | INFO     | PanDA job id: 6896766826
[2025-11-26 20:47:22] 2025-11-27 01:46:20,321 | INFO     | task id: 47556185
[2025-11-26 20:47:22] 2025-11-27 01:46:20,321 | INFO     | errors: (none)
[2025-11-26 20:47:22] 2025-11-27 01:46:20,321 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 20:47:22] 2025-11-27 01:46:20,321 | INFO     | pilot state: finished 
[2025-11-26 20:47:22] 2025-11-27 01:46:20,321 | INFO     | transexitcode: 0
[2025-11-26 20:47:22] 2025-11-27 01:46:20,321 | INFO     | exeerrorcode: 0
[2025-11-26 20:47:22] 2025-11-27 01:46:20,322 | INFO     | exeerrordiag: 
[2025-11-26 20:47:22] 2025-11-27 01:46:20,322 | INFO     | exitcode: 0
[2025-11-26 20:47:22] 2025-11-27 01:46:20,322 | INFO     | exitmsg: OK
[2025-11-26 20:47:22] 2025-11-27 01:46:20,322 | INFO     | cpuconsumptiontime: 471796 s
[2025-11-26 20:47:22] 2025-11-27 01:46:20,322 | INFO     | nevents: 1000
[2025-11-26 20:47:22] 2025-11-27 01:46:20,322 | INFO     | neventsw: 0
[2025-11-26 20:47:22] 2025-11-27 01:46:20,322 | INFO     | pid: 23267
[2025-11-26 20:47:22] 2025-11-27 01:46:20,322 | INFO     | pgrp: 23267
[2025-11-26 20:47:22] 2025-11-27 01:46:20,322 | INFO     | corecount: 8
[2025-11-26 20:47:22] 2025-11-27 01:46:20,322 | INFO     | event service: False
[2025-11-26 20:47:22] 2025-11-27 01:46:20,322 | INFO     | sizes: {0: 2284312, 1: 2284312, 4: 2284602, 11: 2284630, 61460: 2337408, 61461: 2337407, 61465: 2346585, 61466: 2346641, 61471: 2346887}
[2025-11-26 20:47:22] 2025-11-27 01:46:20,322 | INFO     | --------------------------------------------------
[2025-11-26 20:47:22] 2025-11-27 01:46:20,323 | INFO     | 
[2025-11-26 20:47:22] 2025-11-27 01:46:20,323 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 20:47:22] 2025-11-27 01:46:20,345 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 20:47:22] 2025-11-27 01:46:20,345 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 20:47:22] 2025-11-27 01:46:20,345 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 20:47:22] 2025-11-27 01:46:20,345 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 20:47:22] 2025-11-27 01:46:20,345 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 20:47:22] 2025-11-27 01:46:20,345 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 20:47:22] 2025-11-27 01:46:20,345 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 20:47:22] 2025-11-27 01:46:20,346 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 20:47:22] 2025-11-27 01:46:20,346 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 20:47:22] 2025-11-27 01:46:20,346 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 20:47:22] 2025-11-27 01:46:20,346 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 20:47:22] 2025-11-27 01:46:20,346 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 20:47:22] 2025-11-27 01:46:20,346 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 20:47:22] 2025-11-27 01:46:20,346 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 20:47:22] 2025-11-27 01:46:20,346 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 20:47:22] 2025-11-27 01:46:20,346 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 20:47:22] 2025-11-27 01:46:20,346 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 20:47:22] 2025-11-27 01:46:20,347 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 20:47:22] 2025-11-27 01:46:20,347 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 20:47:22] 2025-11-27 01:46:20,347 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 20:47:22] 2025-11-27 01:46:20,347 | INFO     | job 6896766826 has completed (purged errors)
[2025-11-26 20:47:22] 2025-11-27 01:46:20,347 | INFO     | overall cleanup function is called
[2025-11-26 20:47:22] 2025-11-27 01:46:21,360 | INFO     | --- collectZombieJob: --- 10, [23267]
[2025-11-26 20:47:22] 2025-11-27 01:46:21,360 | INFO     | zombie collector waiting for pid 23267
[2025-11-26 20:47:22] 2025-11-27 01:46:21,360 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 20:47:22] 2025-11-27 01:46:21,361 | INFO     | collected zombie processes
[2025-11-26 20:47:22] 2025-11-27 01:46:21,361 | INFO     | will attempt to kill all subprocesses of pid=23267
[2025-11-26 20:47:22] 2025-11-27 01:46:21,647 | INFO     | process IDs to be killed: [23267] (in reverse order)
[2025-11-26 20:47:22] 2025-11-27 01:46:21,723 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 20:47:22] 2025-11-27 01:46:21,723 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 20:47:22] 2025-11-27 01:46:21,729 | INFO     | did not find any defunct processes belonging to 23267
[2025-11-26 20:47:22] 2025-11-27 01:46:21,733 | INFO     | did not find any defunct processes belonging to 23267
[2025-11-26 20:47:22] 2025-11-27 01:46:21,734 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 20:47:22] 2025-11-27 01:46:21,734 | INFO     | ready for new job
[2025-11-26 20:47:22] 2025-11-27 01:46:21,734 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 20:47:22] 2025-11-27 01:46:21,738 | INFO     | ***************************************
[2025-11-26 20:47:22] 2025-11-27 01:46:21,738 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 20:47:22] 2025-11-27 01:46:21,738 | INFO     | ***************************************
[2025-11-26 20:47:22] 2025-11-27 01:46:21,738 | INFO     | 
[2025-11-26 20:47:22] 2025-11-27 01:46:21,740 | INFO     | architecture information:
[2025-11-26 20:47:22] 2025-11-27 01:46:21,740 | INFO     | executing command: cat /etc/os-release
[2025-11-26 20:47:22] 2025-11-27 01:46:21,751 | INFO     | cat /etc/os-release:
[2025-11-26 20:47:22] NAME="CentOS Linux"
[2025-11-26 20:47:22] VERSION="7 (Core)"
[2025-11-26 20:47:22] ID="centos"
[2025-11-26 20:47:22] ID_LIKE="rhel fedora"
[2025-11-26 20:47:22] VERSION_ID="7"
[2025-11-26 20:47:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 20:47:22] ANSI_COLOR="0;31"
[2025-11-26 20:47:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 20:47:22] HOME_URL="https://www.centos.org/"
[2025-11-26 20:47:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 20:47:22] 
[2025-11-26 20:47:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 20:47:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 20:47:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 20:47:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 20:47:22] 
[2025-11-26 20:47:22] 2025-11-27 01:46:21,751 | INFO     | ***************************************
[2025-11-26 20:47:22] 2025-11-27 01:46:22,252 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 20:47:22] 2025-11-27 01:46:22,271 | INFO     | sufficient remaining disk space (102079922176 B)
[2025-11-26 20:47:22] 2025-11-27 01:46:22,271 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 20:47:22] 2025-11-27 01:46:22,271 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 20:47:22] 2025-11-27 01:46:22,272 | INFO     | update_server=False
[2025-11-26 20:47:22] 2025-11-27 01:46:22,272 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 20:47:22] 2025-11-27 01:46:22,272 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 20:47:22] 2025-11-27 01:46:22,272 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:47:22] 2025-11-27 01:46:22,272 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:47:22] 2025-11-27 01:46:22,273 | INFO     | aborting loop
[2025-11-26 20:47:22] 2025-11-27 01:46:22,470 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 20:47:22] 2025-11-27 01:46:22,647 | INFO     | all data control threads have been joined
[2025-11-26 20:47:22] 2025-11-27 01:46:22,964 | INFO     | all payload control threads have been joined
[2025-11-26 20:47:22] 2025-11-27 01:46:23,278 | INFO     | [job] retrieve thread has finished
[2025-11-26 20:47:22] 2025-11-27 01:46:23,279 | INFO     | [job] queue monitor thread has finished
[2025-11-26 20:47:22] 2025-11-27 01:46:23,279 | INFO     | [job] job monitor thread has finished
[2025-11-26 20:47:22] 2025-11-27 01:46:23,557 | INFO     | all job control threads have been joined
[2025-11-26 20:47:22] 2025-11-27 01:46:23,652 | INFO     | [data] control thread has finished
[2025-11-26 20:47:22] 2025-11-27 01:46:23,721 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 20:47:22] 2025-11-27 01:46:23,741 | INFO     | [payload] validate_post thread has finished
[2025-11-26 20:47:22] 2025-11-27 01:46:23,881 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 20:47:22] 2025-11-27 01:46:23,970 | INFO     | [payload] control thread has finished
[2025-11-26 20:47:22] 2025-11-27 01:46:24,039 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 20:47:22] 2025-11-27 01:46:24,040 | INFO     | [data] copytool_in thread has finished
[2025-11-26 20:47:22] 2025-11-27 01:46:24,194 | INFO     | [payload] failed_post thread has finished
[2025-11-26 20:47:22] 2025-11-27 01:46:24,476 | INFO     | [data] copytool_out thread has finished
[2025-11-26 20:47:22] 2025-11-27 01:46:24,563 | INFO     | [job] control thread has finished
[2025-11-26 20:47:22] 2025-11-27 01:46:24,620 | INFO     | [job] validate thread has finished
[2025-11-26 20:47:22] 2025-11-27 01:46:24,620 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 20:47:22] 2025-11-27 01:46:26,276 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 20:47:22] 2025-11-27 01:46:53,200 | INFO     | PID=15147 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 20:47:22] 2025-11-27 01:46:53,200 | INFO     | .. there are 4 such processes running
[2025-11-26 20:47:22] 2025-11-27 01:46:53,201 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 20:47:22] 2025-11-27 01:46:53,201 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 20:47:22] 2025-11-27 01:46:53,202 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 20:47:22] 2025-11-27 01:47:16,381 | INFO     | [monitor] cgroup control has ended
[2025-11-26 20:47:22] 2025-11-27 01:47:17,241 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139763001276224)>', '<ExcThread(monitor, started 139762564314880)>']
[2025-11-26 20:47:22] 2025-11-27 01:47:17,333 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 20:47:22] 2025-11-27 01:47:17,333 | INFO     | [monitor] control thread has ended
[2025-11-26 20:47:22] 2025-11-27 01:47:22,266 | INFO     | all workflow threads have been joined
[2025-11-26 20:47:22] 2025-11-27 01:47:22,266 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 20:47:22] 2025-11-27 01:47:22,267 | INFO     | traces error code: 0
[2025-11-26 20:47:22] 2025-11-27 01:47:22,267 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 20:47:22] 2025-11-27 01:47:22,367 [wrapper] ==== pilot stdout END ====
[2025-11-26 20:47:22] 2025-11-27 01:47:22,370 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 20:47:22] 2025-11-27 01:47:22,373 [wrapper] pilotpid: 15147
[2025-11-26 20:47:22] 2025-11-27 01:47:22,375 [wrapper] Pilot exit status: 0
[2025-11-26 20:47:22] 2025-11-27 01:47:22,387 [wrapper] pandaids: 6896766826
[2025-11-26 20:47:22] 2025-11-27 01:47:22,445 [wrapper] cleanup supervisor_pilot 36822 15148
[2025-11-26 20:47:22] 2025-11-27 01:47:22,448 [wrapper] Test setup, not cleaning
[2025-11-26 20:47:22] 2025-11-27 01:47:22,450 [wrapper] apfmon messages muted
[2025-11-26 20:47:22] 2025-11-27 01:47:22,452 [wrapper] ==== wrapper stdout END ====
[2025-11-26 20:47:22] 2025-11-27 01:47:22,454 [wrapper] ==== wrapper stderr END ====
[2025-11-26 20:47:22]  *** Error codes and diagnostics ***
[2025-11-26 20:47:22]     "exeErrorCode": 0,
[2025-11-26 20:47:22]     "exeErrorDiag": "",
[2025-11-26 20:47:22]     "pilotErrorCode": 0,
[2025-11-26 20:47:22]     "pilotErrorDiag": "",
[2025-11-26 20:47:22]  *** Listing of results directory ***
[2025-11-26 20:47:22] total 1313068
[2025-11-26 20:47:22] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 04:44 pilot3.tar.gz
[2025-11-26 20:47:22] -rwx------ 1 boincer umatlas     36292 Nov 25 05:24 runpilot2-wrapper.sh
[2025-11-26 20:47:22] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 05:24 queuedata.json
[2025-11-26 20:47:22] -rw-r--r-- 1 boincer umatlas       100 Nov 26 03:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 20:47:22] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 03:41 run_atlas
[2025-11-26 20:47:22] -rw-r--r-- 1 boincer umatlas       105 Nov 26 03:41 job.xml
[2025-11-26 20:47:22] -rw-r--r-- 2 boincer umatlas 408279824 Nov 26 03:41 EVNT.47483658._004284.pool.root.1
[2025-11-26 20:47:22] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 03:41 start_atlas.sh
[2025-11-26 20:47:22] drwxrwx--x 2 boincer umatlas      4096 Nov 26 03:41 shared
[2025-11-26 20:47:22] -rw-r--r-- 2 boincer umatlas    590102 Nov 26 03:41 input.tar.gz
[2025-11-26 20:47:22] -rw-r--r-- 1 boincer umatlas         0 Nov 26 03:41 boinc_lockfile
[2025-11-26 20:47:22] -rw-r--r-- 1 boincer umatlas      2784 Nov 26 03:41 pandaJob.out
[2025-11-26 20:47:22] -rw------- 1 boincer umatlas        57 Nov 26 03:41 setup.sh.local
[2025-11-26 20:47:22] -rw------- 1 boincer umatlas    991877 Nov 26 03:41 agis_schedconf.cvmfs.json
[2025-11-26 20:47:22] drwx------ 5 boincer umatlas      4096 Nov 26 03:41 pilot3
[2025-11-26 20:47:22] -rw-r--r-- 1 boincer umatlas       533 Nov 26 20:35 boinc_task_state.xml
[2025-11-26 20:47:22] -rw------- 1 boincer umatlas 911217871 Nov 26 20:45 HITS.47556185._000480.pool.root.1
[2025-11-26 20:47:22] -rw------- 1 boincer umatlas      1064 Nov 26 20:46 memory_monitor_summary.json
[2025-11-26 20:47:22] -rw------- 1 boincer umatlas   1516240 Nov 26 20:46 agis_ddmendpoints.agis.ALL.json
[2025-11-26 20:47:22] -rw------- 1 boincer umatlas   2205670 Nov 26 20:46 log.47556185._000480.job.log.tgz.1
[2025-11-26 20:47:22] -rw-r--r-- 1 boincer umatlas      6038 Nov 26 20:46 init_data.xml
[2025-11-26 20:47:22] -rw------- 1 boincer umatlas      8649 Nov 26 20:46 heartbeat.json
[2025-11-26 20:47:22] -rw------- 1 boincer umatlas        95 Nov 26 20:46 pilot_heartbeat.json
[2025-11-26 20:47:22] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 20:47 boinc_mmap_file
[2025-11-26 20:47:22] -rw-r--r-- 1 boincer umatlas        29 Nov 26 20:47 wrapper_checkpoint.txt
[2025-11-26 20:47:22] -rw------- 1 boincer umatlas      4822 Nov 26 20:47 pilotlog.txt
[2025-11-26 20:47:22] -rw------- 1 boincer umatlas   8374723 Nov 26 20:47 log.47556185._000480.job.log.1
[2025-11-26 20:47:22] -rw------- 1 boincer umatlas       353 Nov 26 20:47 output.list
[2025-11-26 20:47:22] -rw-r--r-- 1 boincer umatlas       620 Nov 26 20:47 runtime_log
[2025-11-26 20:47:22] -rw------- 1 boincer umatlas  10598400 Nov 26 20:47 result.tar.gz
[2025-11-26 20:47:22] -rw-r--r-- 1 boincer umatlas      9333 Nov 26 20:47 runtime_log.err
[2025-11-26 20:47:22] -rw------- 1 boincer umatlas       665 Nov 26 20:47 A4eNDmEP5h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFKMKDmX1nhVn.diag
[2025-11-26 20:47:22] -rw-r--r-- 1 boincer umatlas     21051 Nov 26 20:47 stderr.txt
[2025-11-26 20:47:22] HITS file was successfully produced:
[2025-11-26 20:47:22] -rw------- 1 boincer umatlas 911217871 Nov 26 20:45 shared/HITS.pool.root.1
[2025-11-26 20:47:22]  *** Contents of shared directory: ***
[2025-11-26 20:47:22] total 1299532
[2025-11-26 20:47:22] -rw-r--r-- 2 boincer umatlas 408279824 Nov 26 03:41 ATLAS.root_0
[2025-11-26 20:47:22] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 03:41 start_atlas.sh
[2025-11-26 20:47:22] -rw-r--r-- 2 boincer umatlas    590102 Nov 26 03:41 input.tar.gz
[2025-11-26 20:47:22] -rw------- 1 boincer umatlas 911217871 Nov 26 20:45 HITS.pool.root.1
[2025-11-26 20:47:22] -rw------- 1 boincer umatlas  10598400 Nov 26 20:47 result.tar.gz
20:47:23 (11221): run_atlas exited; CPU time 472140.390630
20:47:23 (11221): called boinc_finish(0)

</stderr_txt>
]]>

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