Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
01:21:31 (4102571): wrapper (7.7.26015): starting
01:21:31 (4102571): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 09:30:43] Arguments: --nthreads 4
[2025-11-26 09:30:43] Threads: 4
[2025-11-26 09:30:43] Checking for CVMFS
[2025-11-26 09:30:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:30:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:30:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:30:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:30:43] 2.13.2.0 213864 3823 59916 153315 1 81 2976146 4096000 5957 130560 0 11141299 99.934 592122 775 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 09:30:43] CVMFS is ok
[2025-11-26 09:30:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 09:30:43] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 09:30:43] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 09:30:43] Further information can be found at the LHC@home message board.
[2025-11-26 09:30:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:30:43] Checking for apptainer binary...
[2025-11-26 09:30:43] apptainer is not installed, using version from CVMFS
[2025-11-26 09:30:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:30:43] X670EPG
[2025-11-26 09:30:43] apptainer works
[2025-11-26 09:30:43] Set ATHENA_PROC_NUMBER=4
[2025-11-26 09:30:43] Set ATHENA_CORE_NUMBER=4
[2025-11-26 09:30:43] Starting ATLAS job with PandaID=6895346096
[2025-11-26 09:30:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 09:30:43]  *** The last 200 lines of the pilot log: ***
[2025-11-26 09:30:43] 2025-11-26 16:30:21,650 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6895346096/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 09:30:43] 2025-11-26 16:30:21,651 | INFO     | extracted standard info from prmon json
[2025-11-26 09:30:43] 2025-11-26 16:30:21,651 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 09:30:43] 2025-11-26 16:30:21,651 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 09:30:43] 2025-11-26 16:30:21,654 | INFO     | fitting pss+swap vs Time
[2025-11-26 09:30:43] 2025-11-26 16:30:21,655 | INFO     | sum of square deviations: 34507363280.0
[2025-11-26 09:30:43] 2025-11-26 16:30:21,657 | INFO     | sum of deviations: 69053774246.00002
[2025-11-26 09:30:43] 2025-11-26 16:30:21,657 | INFO     | mean x: 1764159961.0
[2025-11-26 09:30:43] 2025-11-26 16:30:21,657 | INFO     | mean y: 2265459.338877339
[2025-11-26 09:30:43] 2025-11-26 16:30:21,657 | INFO     | intersect: -3528050742.807246
[2025-11-26 09:30:43] 2025-11-26 16:30:21,658 | INFO     | chi2: 3.5777531743608053
[2025-11-26 09:30:43] 2025-11-26 16:30:21,658 | INFO     | sum of square deviations: 33442394475.0
[2025-11-26 09:30:43] 2025-11-26 16:30:21,660 | INFO     | sum of deviations: 155970005465.50003
[2025-11-26 09:30:43] 2025-11-26 16:30:21,660 | INFO     | mean x: 1764159808.5
[2025-11-26 09:30:43] 2025-11-26 16:30:21,660 | INFO     | mean y: 2277865.0147058824
[2025-11-26 09:30:43] 2025-11-26 16:30:21,661 | INFO     | intersect: -8225482715.330535
[2025-11-26 09:30:43] 2025-11-26 16:30:21,661 | INFO     | chi2: 1.6317130575003584
[2025-11-26 09:30:43] 2025-11-26 16:30:21,661 | INFO     | current chi2=1.6317130575003584 (change=54.39279967121049 %)
[2025-11-26 09:30:43] 2025-11-26 16:30:21,661 | INFO     | sum of square deviations: 32399565620.0
[2025-11-26 09:30:43] 2025-11-26 16:30:21,663 | INFO     | sum of deviations: 152465810475.99997
[2025-11-26 09:30:43] 2025-11-26 16:30:21,664 | INFO     | mean x: 1764159656.0
[2025-11-26 09:30:43] 2025-11-26 16:30:21,664 | INFO     | mean y: 2277352.5626326962
[2025-11-26 09:30:43] 2025-11-26 16:30:21,664 | INFO     | intersect: -8299501594.592935
[2025-11-26 09:30:43] 2025-11-26 16:30:21,664 | INFO     | chi2: 1.631929567095057
[2025-11-26 09:30:43] 2025-11-26 16:30:21,664 | INFO     | current chi2=1.631929567095057 (change=-0.013268852247240627 %)
[2025-11-26 09:30:43] 2025-11-26 16:30:21,664 | INFO     | right removable region: 470
[2025-11-26 09:30:43] 2025-11-26 16:30:21,664 | INFO     | sum of square deviations: 33442394475.0
[2025-11-26 09:30:43] 2025-11-26 16:30:21,667 | INFO     | sum of deviations: -2251345055.9999847
[2025-11-26 09:30:43] 2025-11-26 16:30:21,667 | INFO     | mean x: 1764160113.5
[2025-11-26 09:30:43] 2025-11-26 16:30:21,667 | INFO     | mean y: 2275622.81092437
[2025-11-26 09:30:43] 2025-11-26 16:30:21,667 | INFO     | intersect: 121039043.07048988
[2025-11-26 09:30:43] 2025-11-26 16:30:21,667 | INFO     | chi2: 2.0593443442778017
[2025-11-26 09:30:43] 2025-11-26 16:30:21,667 | INFO     | current chi2=2.0593443442778017 (change=42.44029020683574 %)
[2025-11-26 09:30:43] 2025-11-26 16:30:21,667 | INFO     | sum of square deviations: 32399565620.0
[2025-11-26 09:30:43] 2025-11-26 16:30:21,670 | INFO     | sum of deviations: -5066733383.000004
[2025-11-26 09:30:43] 2025-11-26 16:30:21,670 | INFO     | mean x: 1764160266.0
[2025-11-26 09:30:43] 2025-11-26 16:30:21,670 | INFO     | mean y: 2276033.3864118895
[2025-11-26 09:30:43] 2025-11-26 16:30:21,670 | INFO     | intersect: 278160278.79699486
[2025-11-26 09:30:43] 2025-11-26 16:30:21,670 | INFO     | chi2: 2.0587685267707574
[2025-11-26 09:30:43] 2025-11-26 16:30:21,670 | INFO     | current chi2=2.0587685267707574 (change=0.027961205645101052 %)
[2025-11-26 09:30:43] 2025-11-26 16:30:21,670 | INFO     | left removable region: 20
[2025-11-26 09:30:43] 2025-11-26 16:30:21,670 | INFO     | sum of square deviations: 28256204212.5
[2025-11-26 09:30:43] 2025-11-26 16:30:21,672 | INFO     | sum of deviations: 78675324925.0
[2025-11-26 09:30:43] 2025-11-26 16:30:21,673 | INFO     | mean x: 1764160235.5
[2025-11-26 09:30:43] 2025-11-26 16:30:21,673 | INFO     | mean y: 2288181.8577777776
[2025-11-26 09:30:43] 2025-11-26 16:30:21,673 | INFO     | intersect: -4909761529.5583935
[2025-11-26 09:30:43] 2025-11-26 16:30:21,673 | INFO     | chi2: 0.08804479412516635
[2025-11-26 09:30:43] 2025-11-26 16:30:21,673 | INFO     | current memory leak: 2.78 B/s (using 450 data points, chi2=0.09)
[2025-11-26 09:30:43] 2025-11-26 16:30:21,673 | INFO     | could have reported an average CPU frequency of 4542 MHz (20 samples)
[2025-11-26 09:30:43] 2025-11-26 16:30:21,673 | INFO     | ..............................
[2025-11-26 09:30:43] 2025-11-26 16:30:21,673 | INFO     | . Timing measurements:
[2025-11-26 09:30:43] 2025-11-26 16:30:21,673 | INFO     | . get job = 0 s
[2025-11-26 09:30:43] 2025-11-26 16:30:21,673 | INFO     | . initial setup = 2 s
[2025-11-26 09:30:43] 2025-11-26 16:30:21,673 | INFO     | . payload setup = 3 s
[2025-11-26 09:30:43] 2025-11-26 16:30:21,673 | INFO     | . stage-in = 0 s
[2025-11-26 09:30:43] 2025-11-26 16:30:21,673 | INFO     | . payload execution = 29295 s
[2025-11-26 09:30:43] 2025-11-26 16:30:21,674 | INFO     | . stage-out = 3 s
[2025-11-26 09:30:43] 2025-11-26 16:30:21,674 | INFO     | . log creation = 0 s
[2025-11-26 09:30:43] 2025-11-26 16:30:21,674 | INFO     | ..............................
[2025-11-26 09:30:43] 2025-11-26 16:30:21,717 | INFO     | 
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | job summary report
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | --------------------------------------------------
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | PanDA job id: 6895346096
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | task id: 47556137
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | errors: (none)
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | pilot state: finished 
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | transexitcode: 0
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | exeerrorcode: 0
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | exeerrordiag: 
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | exitcode: 0
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | exitmsg: OK
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | cpuconsumptiontime: 108377 s
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | nevents: 1000
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | neventsw: 0
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | pid: 4113084
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | pgrp: 4113084
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | corecount: 4
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | event service: False
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | sizes: {0: 2284270, 3: 2284532, 11: 2284560, 29301: 2323491, 29305: 2332555, 29308: 2332745}
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | --------------------------------------------------
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | 
[2025-11-26 09:30:43] 2025-11-26 16:30:21,718 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-11-26 09:30:43] 2025-11-26 16:30:21,730 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 09:30:43] 2025-11-26 16:30:21,730 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 09:30:43] 2025-11-26 16:30:21,730 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 09:30:43] 2025-11-26 16:30:21,730 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 09:30:43] 2025-11-26 16:30:21,730 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 09:30:43] 2025-11-26 16:30:21,730 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 09:30:43] 2025-11-26 16:30:21,730 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 09:30:43] 2025-11-26 16:30:21,730 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 09:30:43] 2025-11-26 16:30:21,730 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 09:30:43] 2025-11-26 16:30:21,730 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 09:30:43] 2025-11-26 16:30:21,730 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 09:30:43] 2025-11-26 16:30:21,730 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 09:30:43] 2025-11-26 16:30:21,730 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 09:30:43] 2025-11-26 16:30:21,730 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 09:30:43] 2025-11-26 16:30:21,730 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 09:30:43] 2025-11-26 16:30:21,730 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 09:30:43] 2025-11-26 16:30:21,730 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 09:30:43] 2025-11-26 16:30:21,730 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 09:30:43] 2025-11-26 16:30:21,730 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 09:30:43] 2025-11-26 16:30:21,731 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 09:30:43] 2025-11-26 16:30:21,731 | INFO     | job 6895346096 has completed (purged errors)
[2025-11-26 09:30:43] 2025-11-26 16:30:21,731 | INFO     | overall cleanup function is called
[2025-11-26 09:30:43] 2025-11-26 16:30:22,394 | WARNING  | process 4113084 can no longer be monitored (due to stat problems) - aborting
[2025-11-26 09:30:43] 2025-11-26 16:30:22,460 | INFO     | using path: /var/lib/boinc-client/slots/3/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 09:30:43] 2025-11-26 16:30:22,554 | INFO     | number of running child processes to parent process 4113084: 1
[2025-11-26 09:30:43] 2025-11-26 16:30:22,554 | INFO     | maximum number of monitored processes: 10
[2025-11-26 09:30:43] 2025-11-26 16:30:22,554 | INFO     | aborting job monitoring since job object (job id=6895346096) has expired
[2025-11-26 09:30:43] 2025-11-26 16:30:22,740 | INFO     | --- collectZombieJob: --- 10, [4113084]
[2025-11-26 09:30:43] 2025-11-26 16:30:22,740 | INFO     | zombie collector waiting for pid 4113084
[2025-11-26 09:30:43] 2025-11-26 16:30:22,740 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 09:30:43] 2025-11-26 16:30:22,740 | INFO     | collected zombie processes
[2025-11-26 09:30:43] 2025-11-26 16:30:22,741 | INFO     | will attempt to kill all subprocesses of pid=4113084
[2025-11-26 09:30:43] 2025-11-26 16:30:22,835 | INFO     | process IDs to be killed: [4113084] (in reverse order)
[2025-11-26 09:30:43] 2025-11-26 16:30:22,881 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 09:30:43] 2025-11-26 16:30:22,881 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 09:30:43] 2025-11-26 16:30:22,885 | INFO     | did not find any defunct processes belonging to 4113084
[2025-11-26 09:30:43] 2025-11-26 16:30:22,888 | INFO     | did not find any defunct processes belonging to 4113084
[2025-11-26 09:30:43] 2025-11-26 16:30:22,888 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 09:30:43] 2025-11-26 16:30:22,888 | INFO     | ready for new job
[2025-11-26 09:30:43] 2025-11-26 16:30:22,888 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 09:30:43] 2025-11-26 16:30:22,890 | INFO     | ***************************************
[2025-11-26 09:30:43] 2025-11-26 16:30:22,890 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 09:30:43] 2025-11-26 16:30:22,890 | INFO     | ***************************************
[2025-11-26 09:30:43] 2025-11-26 16:30:22,890 | INFO     | 
[2025-11-26 09:30:43] 2025-11-26 16:30:22,891 | INFO     | architecture information:
[2025-11-26 09:30:43] 2025-11-26 16:30:22,891 | INFO     | executing command: cat /etc/os-release
[2025-11-26 09:30:43] 2025-11-26 16:30:22,901 | INFO     | cat /etc/os-release:
[2025-11-26 09:30:43] NAME="CentOS Linux"
[2025-11-26 09:30:43] VERSION="7 (Core)"
[2025-11-26 09:30:43] ID="centos"
[2025-11-26 09:30:43] ID_LIKE="rhel fedora"
[2025-11-26 09:30:43] VERSION_ID="7"
[2025-11-26 09:30:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 09:30:43] ANSI_COLOR="0;31"
[2025-11-26 09:30:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 09:30:43] HOME_URL="https://www.centos.org/"
[2025-11-26 09:30:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 09:30:43] 
[2025-11-26 09:30:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 09:30:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 09:30:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 09:30:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 09:30:43] 
[2025-11-26 09:30:43] 2025-11-26 16:30:22,901 | INFO     | ***************************************
[2025-11-26 09:30:43] 2025-11-26 16:30:23,403 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-11-26 09:30:43] 2025-11-26 16:30:23,419 | INFO     | sufficient remaining disk space (425366388736 B)
[2025-11-26 09:30:43] 2025-11-26 16:30:23,419 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 09:30:43] 2025-11-26 16:30:23,419 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 09:30:43] 2025-11-26 16:30:23,419 | INFO     | update_server=False
[2025-11-26 09:30:43] 2025-11-26 16:30:23,419 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 09:30:43] 2025-11-26 16:30:23,419 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:30:43] 2025-11-26 16:30:23,419 | INFO     | will abort loop
[2025-11-26 09:30:43] 2025-11-26 16:30:23,419 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 09:30:43] 2025-11-26 16:30:23,419 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 09:30:43] 2025-11-26 16:30:23,419 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 09:30:43] 2025-11-26 16:30:23,419 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 09:30:43] 2025-11-26 16:30:23,420 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:30:43] 2025-11-26 16:30:23,420 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 09:30:43] 2025-11-26 16:30:23,500 | INFO     | all job control threads have been joined
[2025-11-26 09:30:43] 2025-11-26 16:30:24,193 | INFO     | all data control threads have been joined
[2025-11-26 09:30:43] 2025-11-26 16:30:24,424 | INFO     | [job] retrieve thread has finished
[2025-11-26 09:30:43] 2025-11-26 16:30:24,424 | INFO     | [job] job monitor thread has finished
[2025-11-26 09:30:43] 2025-11-26 16:30:24,424 | INFO     | [job] queue monitor thread has finished
[2025-11-26 09:30:43] 2025-11-26 16:30:24,467 | INFO     | [job] validate thread has finished
[2025-11-26 09:30:43] 2025-11-26 16:30:24,506 | INFO     | [job] control thread has finished
[2025-11-26 09:30:43] 2025-11-26 16:30:24,532 | INFO     | [payload] validate_post thread has finished
[2025-11-26 09:30:43] 2025-11-26 16:30:24,744 | INFO     | all payload control threads have been joined
[2025-11-26 09:30:43] 2025-11-26 16:30:25,033 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 09:30:43] 2025-11-26 16:30:25,074 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 09:30:43] 2025-11-26 16:30:25,199 | INFO     | [data] control thread has finished
[2025-11-26 09:30:43] 2025-11-26 16:30:25,380 | INFO     | [payload] failed_post thread has finished
[2025-11-26 09:30:43] 2025-11-26 16:30:25,427 | INFO     | [data] copytool_out thread has finished
[2025-11-26 09:30:43] 2025-11-26 16:30:25,501 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 09:30:43] 2025-11-26 16:30:25,562 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 09:30:43] 2025-11-26 16:30:25,749 | INFO     | [payload] control thread has finished
[2025-11-26 09:30:43] 2025-11-26 16:30:25,918 | INFO     | [data] copytool_in thread has finished
[2025-11-26 09:30:43] 2025-11-26 16:30:28,287 | INFO     | [monitor] cgroup control has ended
[2025-11-26 09:30:43] 2025-11-26 16:30:29,567 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 09:30:43] 2025-11-26 16:30:34,314 | INFO     | job.realtimelogging is not enabled
[2025-11-26 09:30:43] 2025-11-26 16:30:35,319 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 09:30:43] 2025-11-26 16:30:37,257 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124603879003968)>', '<ExcThread(monitor, started 124603456292608)>']
[2025-11-26 09:30:43] 2025-11-26 16:30:37,490 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 09:30:43] 2025-11-26 16:30:37,490 | INFO     | [monitor] control thread has ended
[2025-11-26 09:30:43] 2025-11-26 16:30:42,282 | INFO     | all workflow threads have been joined
[2025-11-26 09:30:43] 2025-11-26 16:30:42,282 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 09:30:43] 2025-11-26 16:30:42,282 | INFO     | traces error code: 0
[2025-11-26 09:30:43] 2025-11-26 16:30:42,283 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 09:30:43] 2025-11-26 16:30:42,323 [wrapper] ==== pilot stdout END ====
[2025-11-26 09:30:43] 2025-11-26 16:30:42,324 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 09:30:43] 2025-11-26 16:30:42,325 [wrapper] pilotpid: 4106409
[2025-11-26 09:30:43] 2025-11-26 16:30:42,326 [wrapper] Pilot exit status: 0
[2025-11-26 09:30:43] 2025-11-26 16:30:42,330 [wrapper] pandaids: 6895346096
[2025-11-26 09:30:43] 2025-11-26 16:30:42,347 [wrapper] cleanup supervisor_pilot  476285 4106410
[2025-11-26 09:30:43] 2025-11-26 16:30:42,349 [wrapper] Test setup, not cleaning
[2025-11-26 09:30:43] 2025-11-26 16:30:42,350 [wrapper] apfmon messages muted
[2025-11-26 09:30:43] 2025-11-26 16:30:42,351 [wrapper] ==== wrapper stdout END ====
[2025-11-26 09:30:43] 2025-11-26 16:30:42,352 [wrapper] ==== wrapper stderr END ====
[2025-11-26 09:30:43]  *** Error codes and diagnostics ***
[2025-11-26 09:30:43]     "exeErrorCode": 0,
[2025-11-26 09:30:43]     "exeErrorDiag": "",
[2025-11-26 09:30:43]     "pilotErrorCode": 0,
[2025-11-26 09:30:43]     "pilotErrorDiag": "",
[2025-11-26 09:30:43]  *** Listing of results directory ***
[2025-11-26 09:30:43] total 1320168
[2025-11-26 09:30:43] -rw-r--r-- 1 boinc boinc    576529 Nov 22 10:43 pilot3.tar.gz
[2025-11-26 09:30:43] -rw-r--r-- 1 boinc boinc      5112 Nov 22 10:49 queuedata.json
[2025-11-26 09:30:43] -rwx------ 1 boinc boinc     36292 Nov 22 10:51 runpilot2-wrapper.sh
[2025-11-26 09:30:43] -rw-r--r-- 1 boinc boinc       100 Nov 26 01:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 09:30:43] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 01:21 run_atlas
[2025-11-26 09:30:43] -rw-r--r-- 1 boinc boinc       105 Nov 26 01:21 job.xml
[2025-11-26 09:30:43] -rw-r--r-- 1 boinc boinc      9986 Nov 26 01:21 init_data.xml
[2025-11-26 09:30:43] -rw-r--r-- 2 boinc boinc 410118000 Nov 26 01:21 EVNT.47483658._000455.pool.root.1
[2025-11-26 09:30:43] -rw-r--r-- 2 boinc boinc     15847 Nov 26 01:21 start_atlas.sh
[2025-11-26 09:30:43] drwxrwx--x 2 boinc boinc      4096 Nov 26 01:21 shared
[2025-11-26 09:30:43] -rw-r--r-- 2 boinc boinc    590100 Nov 26 01:21 input.tar.gz
[2025-11-26 09:30:43] -rw-r--r-- 1 boinc boinc         0 Nov 26 01:21 boinc_lockfile
[2025-11-26 09:30:43] -rw-r--r-- 1 boinc boinc       112 Nov 26 01:21 stderr.txt
[2025-11-26 09:30:43] -rw-r--r-- 1 boinc boinc      2784 Nov 26 01:21 pandaJob.out
[2025-11-26 09:30:43] -rw------- 1 boinc boinc    991877 Nov 26 01:21 agis_schedconf.cvmfs.json
[2025-11-26 09:30:43] drwx------ 5 boinc boinc      4096 Nov 26 01:21 pilot3
[2025-11-26 09:30:43] -rw-r--r-- 1 boinc boinc       532 Nov 26 09:25 boinc_task_state.xml
[2025-11-26 09:30:43] -rw------- 1 boinc boinc 926793221 Nov 26 09:29 HITS.47556137._004510.pool.root.1
[2025-11-26 09:30:43] -rw------- 1 boinc boinc        95 Nov 26 09:29 pilot_heartbeat.json
[2025-11-26 09:30:43] -rw------- 1 boinc boinc      1031 Nov 26 09:30 memory_monitor_summary.json
[2025-11-26 09:30:43] -rw------- 1 boinc boinc   1516240 Nov 26 09:30 agis_ddmendpoints.agis.ALL.json
[2025-11-26 09:30:43] -rw------- 1 boinc boinc   1304111 Nov 26 09:30 log.47556137._004510.job.log.tgz.1
[2025-11-26 09:30:43] -rw------- 1 boinc boinc      8546 Nov 26 09:30 heartbeat.json
[2025-11-26 09:30:43] -rw-r--r-- 1 boinc boinc        29 Nov 26 09:30 wrapper_checkpoint.txt
[2025-11-26 09:30:43] -rw-r--r-- 1 boinc boinc      8192 Nov 26 09:30 boinc_mmap_file
[2025-11-26 09:30:43] -rw------- 1 boinc boinc      4634 Nov 26 09:30 pilotlog.txt
[2025-11-26 09:30:43] -rw------- 1 boinc boinc   4211413 Nov 26 09:30 log.47556137._004510.job.log.1
[2025-11-26 09:30:43] -rw------- 1 boinc boinc       353 Nov 26 09:30 output.list
[2025-11-26 09:30:43] -rw-r--r-- 1 boinc boinc       620 Nov 26 09:30 runtime_log
[2025-11-26 09:30:43] -rw------- 1 boinc boinc   5539840 Nov 26 09:30 result.tar.gz
[2025-11-26 09:30:43] -rw-r--r-- 1 boinc boinc      8920 Nov 26 09:30 runtime_log.err
[2025-11-26 09:30:43] -rw------- 1 boinc boinc       662 Nov 26 09:30 LraMDmYw6g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKKKKDmG2nnCo.diag
[2025-11-26 09:30:43] HITS file was successfully produced:
[2025-11-26 09:30:43] -rw------- 1 boinc boinc 926793221 Nov 26 09:29 shared/HITS.pool.root.1
[2025-11-26 09:30:43]  *** Contents of shared directory: ***
[2025-11-26 09:30:43] total 1311596
[2025-11-26 09:30:43] -rw-r--r-- 2 boinc boinc 410118000 Nov 26 01:21 ATLAS.root_0
[2025-11-26 09:30:43] -rw-r--r-- 2 boinc boinc     15847 Nov 26 01:21 start_atlas.sh
[2025-11-26 09:30:43] -rw-r--r-- 2 boinc boinc    590100 Nov 26 01:21 input.tar.gz
[2025-11-26 09:30:43] -rw------- 1 boinc boinc 926793221 Nov 26 09:29 HITS.pool.root.1
[2025-11-26 09:30:43] -rw------- 1 boinc boinc   5539840 Nov 26 09:30 result.tar.gz
09:30:44 (4102571): run_atlas exited; CPU time 108397.946651
09:30:44 (4102571): called boinc_finish(0)

</stderr_txt>
]]>

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