Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:10:48 (3436338): wrapper (7.7.26015): starting
09:10:48 (3436338): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 09:10:48] Arguments: --nthreads 3
[2025-11-26 09:10:48] Threads: 3
[2025-11-26 09:10:48] Checking for CVMFS
[2025-11-26 09:10:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:10:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:10:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:10:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:10:48] 2.9.2.0 2184780 520 71332 153314 3 88 35575338 36864001 0 130560 0 3730909 99.999 17042 29231 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 09:10:48] CVMFS is ok
[2025-11-26 09:10:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 09:10:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 09:10:48] Further information can be found at the LHC@home message board.
[2025-11-26 09:10:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:10:48] Checking for apptainer binary...
[2025-11-26 09:10:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 09:10:48] Running /usr/bin/apptainer --version
[2025-11-26 09:10:48] apptainer version 1.4.1-1.1
[2025-11-26 09:10:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:10:48] thA335
[2025-11-26 09:10:48] apptainer works
[2025-11-26 09:10:48] Set ATHENA_PROC_NUMBER=3
[2025-11-26 09:10:48] Set ATHENA_CORE_NUMBER=3
[2025-11-26 09:10:49] Starting ATLAS job with PandaID=6895345521
[2025-11-26 09:10:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 09:15:05]  *** The last 200 lines of the pilot log: ***
[2025-11-26 09:15:05] VERSION="7 (Core)"
[2025-11-26 09:15:05] ID="centos"
[2025-11-26 09:15:05] ID_LIKE="rhel fedora"
[2025-11-26 09:15:05] VERSION_ID="7"
[2025-11-26 09:15:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 09:15:05] ANSI_COLOR="0;31"
[2025-11-26 09:15:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 09:15:05] HOME_URL="https://www.centos.org/"
[2025-11-26 09:15:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 09:15:05] 
[2025-11-26 09:15:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 09:15:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 09:15:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 09:15:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 09:15:05] 
[2025-11-26 09:15:05] 2025-11-26 08:14:13,047 | INFO     | ***************************************
[2025-11-26 09:15:05] 2025-11-26 08:14:13,551 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 09:15:05] 2025-11-26 08:14:13,564 | INFO     | sufficient remaining disk space (826032521216 B)
[2025-11-26 09:15:05] 2025-11-26 08:14:13,564 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 09:15:05] 2025-11-26 08:14:13,564 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 09:15:05] 2025-11-26 08:14:13,565 | INFO     | update_server=False
[2025-11-26 09:15:05] 2025-11-26 08:14:13,565 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 09:15:05] 2025-11-26 08:14:13,565 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:15:05] 2025-11-26 08:14:13,565 | INFO     | aborting loop
[2025-11-26 09:15:05] 2025-11-26 08:14:13,565 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:15:05] 2025-11-26 08:14:13,842 | INFO     | all job control threads have been joined
[2025-11-26 09:15:05] 2025-11-26 08:14:14,238 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 09:15:05] 2025-11-26 08:14:14,570 | INFO     | [job] job monitor thread has finished
[2025-11-26 09:15:05] 2025-11-26 08:14:14,571 | INFO     | [job] queue monitor thread has finished
[2025-11-26 09:15:05] 2025-11-26 08:14:14,572 | INFO     | [job] retrieve thread has finished
[2025-11-26 09:15:05] 2025-11-26 08:14:14,620 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 09:15:05] 2025-11-26 08:14:14,662 | INFO     | all data control threads have been joined
[2025-11-26 09:15:05] 2025-11-26 08:14:14,848 | INFO     | [job] control thread has finished
[2025-11-26 09:15:05] 2025-11-26 08:14:14,963 | INFO     | [data] copytool_in thread has finished
[2025-11-26 09:15:05] 2025-11-26 08:14:14,964 | INFO     | all payload control threads have been joined
[2025-11-26 09:15:05] 2025-11-26 08:14:15,303 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 09:15:05] 2025-11-26 08:14:15,314 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 09:15:05] 2025-11-26 08:14:15,596 | INFO     | [payload] validate_post thread has finished
[2025-11-26 09:15:05] 2025-11-26 08:14:15,668 | INFO     | [data] control thread has finished
[2025-11-26 09:15:05] 2025-11-26 08:14:15,956 | INFO     | [job] validate thread has finished
[2025-11-26 09:15:05] 2025-11-26 08:14:15,970 | INFO     | [payload] control thread has finished
[2025-11-26 09:15:05] 2025-11-26 08:14:16,060 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 09:15:05] 2025-11-26 08:14:16,135 | INFO     | [payload] failed_post thread has finished
[2025-11-26 09:15:05] 2025-11-26 08:14:16,245 | INFO     | [data] copytool_out thread has finished
[2025-11-26 09:15:05] 2025-11-26 08:14:16,658 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 09:15:05] 2025-11-26 08:14:20,663 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 09:15:05] 2025-11-26 08:14:44,085 | INFO     | PID=3440077 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 09:15:05] 2025-11-26 08:14:44,085 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 09:15:05] 2025-11-26 08:14:44,085 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 09:15:05] 2025-11-26 08:14:44,085 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 09:15:05] 2025-11-26 08:14:59,131 | INFO     | [monitor] cgroup control has ended
[2025-11-26 09:15:05] 2025-11-26 08:15:00,406 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140231699412800)>', '<ExcThread(monitor, started 140231210690304)>']
[2025-11-26 09:15:05] 2025-11-26 08:15:01,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 09:15:05] 2025-11-26 08:15:01,176 | INFO     | [monitor] control thread has ended
[2025-11-26 09:15:05] 2025-11-26 08:15:05,432 | INFO     | all workflow threads have been joined
[2025-11-26 09:15:05] 2025-11-26 08:15:05,433 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 09:15:05] 2025-11-26 08:15:05,433 | INFO     | traces error code: 0
[2025-11-26 09:15:05] 2025-11-26 08:15:05,434 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 09:15:05] 2025-11-26 08:15:05,486 [wrapper] ==== pilot stdout END ====
[2025-11-26 09:15:05] 2025-11-26 08:15:05,489 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 09:15:05] 2025-11-26 08:15:05,492 [wrapper] pilotpid: 3440077
[2025-11-26 09:15:05] 2025-11-26 08:15:05,496 [wrapper] Pilot exit status: 0
[2025-11-26 09:15:05] 2025-11-26 08:15:05,503 [wrapper] pandaids: 6895345521
[2025-11-26 09:15:05] 2025-11-26 08:15:05,520 [wrapper] cleanup supervisor_pilot 3440083 3440078
[2025-11-26 09:15:05] 2025-11-26 08:15:05,523 [wrapper] Test setup, not cleaning
[2025-11-26 09:15:05] 2025-11-26 08:15:05,526 [wrapper] apfmon messages muted
[2025-11-26 09:15:05] 2025-11-26 08:15:05,529 [wrapper] ==== wrapper stdout END ====
[2025-11-26 09:15:05] 2025-11-26 08:15:05,532 [wrapper] ==== wrapper stderr END ====
[2025-11-26 09:15:05]  *** Error codes and diagnostics ***
[2025-11-26 09:15:05]     "exeErrorCode": 65,
[2025-11-26 09:15:05]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-26 09:15:05]     "pilotErrorCode": 1305,
[2025-11-26 09:15:05]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-26 09:15:05]  *** Listing of results directory ***
[2025-11-26 09:15:05] total 405960
[2025-11-26 09:15:05] -rw-r--r-- 1 boinc boinc    576529 Nov 22 18:17 pilot3.tar.gz
[2025-11-26 09:15:05] -rw-r--r-- 1 boinc boinc      5112 Nov 22 18:32 queuedata.json
[2025-11-26 09:15:05] -rwx------ 1 boinc boinc     36292 Nov 22 18:33 runpilot2-wrapper.sh
[2025-11-26 09:15:05] -rw-r--r-- 1 boinc boinc       100 Nov 26 09:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 09:15:05] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 09:10 run_atlas
[2025-11-26 09:15:05] -rw-r--r-- 1 boinc boinc       105 Nov 26 09:10 job.xml
[2025-11-26 09:15:05] -rw-r--r-- 2 boinc boinc 411509547 Nov 26 09:10 EVNT.47483658._000450.pool.root.1
[2025-11-26 09:15:05] -rw-r--r-- 2 boinc boinc    590102 Nov 26 09:10 input.tar.gz
[2025-11-26 09:15:05] -rw-r--r-- 2 boinc boinc     15847 Nov 26 09:10 start_atlas.sh
[2025-11-26 09:15:05] drwxrwx--x 2 boinc boinc      4096 Nov 26 09:10 shared
[2025-11-26 09:15:05] -rw-r--r-- 1 boinc boinc         0 Nov 26 09:10 boinc_setup_complete
[2025-11-26 09:15:05] -rw-r--r-- 1 boinc boinc      6196 Nov 26 09:10 init_data.xml
[2025-11-26 09:15:05] -rw-r--r-- 1 boinc boinc         0 Nov 26 09:10 boinc_lockfile
[2025-11-26 09:15:05] -rw-r--r-- 1 boinc boinc      2784 Nov 26 09:10 pandaJob.out
[2025-11-26 09:15:05] -rw------- 1 boinc boinc    991877 Nov 26 09:10 agis_schedconf.cvmfs.json
[2025-11-26 09:15:05] -rw------- 1 boinc boinc   1516240 Nov 26 09:10 agis_ddmendpoints.agis.ALL.json
[2025-11-26 09:15:05] drwx------ 5 boinc boinc      4096 Nov 26 09:10 pilot3
[2025-11-26 09:15:05] -rw-r--r-- 1 boinc boinc       523 Nov 26 09:11 boinc_task_state.xml
[2025-11-26 09:15:05] -rw------- 1 boinc boinc       959 Nov 26 09:12 memory_monitor_summary.json
[2025-11-26 09:15:05] -rw------- 1 boinc boinc     56051 Nov 26 09:12 log.47556137._004454.job.log.tgz.1
[2025-11-26 09:15:05] -rw------- 1 boinc boinc        95 Nov 26 09:13 pilot_heartbeat.json
[2025-11-26 09:15:05] -rw------- 1 boinc boinc      8397 Nov 26 09:14 heartbeat.json
[2025-11-26 09:15:05] -rw-r--r-- 1 boinc boinc      8192 Nov 26 09:14 boinc_mmap_file
[2025-11-26 09:15:05] -rw-r--r-- 1 boinc boinc        23 Nov 26 09:14 wrapper_checkpoint.txt
[2025-11-26 09:15:05] -rw------- 1 boinc boinc      4752 Nov 26 09:15 pilotlog.txt
[2025-11-26 09:15:05] -rw------- 1 boinc boinc     92270 Nov 26 09:15 log.47556137._004454.job.log.1
[2025-11-26 09:15:05] -rw------- 1 boinc boinc       186 Nov 26 09:15 output.list
[2025-11-26 09:15:05] -rw-r--r-- 1 boinc boinc       620 Nov 26 09:15 runtime_log
[2025-11-26 09:15:05] -rw------- 1 boinc boinc    163840 Nov 26 09:15 result.tar.gz
[2025-11-26 09:15:05] -rw-r--r-- 1 boinc boinc      8744 Nov 26 09:15 runtime_log.err
[2025-11-26 09:15:05] -rw------- 1 boinc boinc       649 Nov 26 09:15 GUiNDmTf6g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKJKKDmq2TPXn.diag
[2025-11-26 09:15:05] -rw-r--r-- 1 boinc boinc      9040 Nov 26 09:15 stderr.txt
[2025-11-26 09:15:05] No HITS result produced
[2025-11-26 09:15:05]  *** Contents of shared directory: ***
[2025-11-26 09:15:05] total 402628
[2025-11-26 09:15:05] -rw-r--r-- 2 boinc boinc 411509547 Nov 26 09:10 ATLAS.root_0
[2025-11-26 09:15:05] -rw-r--r-- 2 boinc boinc    590102 Nov 26 09:10 input.tar.gz
[2025-11-26 09:15:05] -rw-r--r-- 2 boinc boinc     15847 Nov 26 09:10 start_atlas.sh
[2025-11-26 09:15:05] -rw------- 1 boinc boinc    163840 Nov 26 09:15 result.tar.gz
09:15:07 (3436338): run_atlas exited; CPU time 30.786984
09:15:07 (3436338): called boinc_finish(0)

</stderr_txt>
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