Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
17:26:32 (193817): wrapper (7.7.26015): starting
17:26:32 (193817): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 17:26:32] Arguments: --nthreads 4
[2025-11-27 17:26:32] Threads: 4
[2025-11-27 17:26:32] Checking for CVMFS
[2025-11-27 17:26:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 17:26:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 17:26:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 17:26:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 17:26:32] 2.12.7.0 3613689 8259 47460 153373 3 90 5618888 6144000 5038 130560 1 26052323 99.977 773818 650 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-27 17:26:32] CVMFS is ok
[2025-11-27 17:26:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 17:26:32] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-27 17:26:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-27 17:26:32] Further information can be found at the LHC@home message board.
[2025-11-27 17:26:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 17:26:32] Checking for apptainer binary...
[2025-11-27 17:26:32] apptainer is not installed, using version from CVMFS
[2025-11-27 17:26:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 17:26:32] biggy
[2025-11-27 17:26:32] apptainer works
[2025-11-27 17:26:32] Set ATHENA_PROC_NUMBER=4
[2025-11-27 17:26:32] Set ATHENA_CORE_NUMBER=4
[2025-11-27 17:26:33] Starting ATLAS job with PandaID=6886167163
[2025-11-27 17:26:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/single_8TB/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 22:04:30]  *** The last 200 lines of the pilot log: ***
[2025-11-27 22:04:30] 2025-11-27 21:03:53,861 | INFO     | monitor loop #1239: job 0:6886167163 is in state 'finished'
[2025-11-27 22:04:30] 2025-11-27 21:03:53,861 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:04:30] 2025-11-27 21:03:54,954 | INFO     | time since job start (16636s) is within the limit (172800.0s)
[2025-11-27 22:04:30] 2025-11-27 21:03:54,991 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 22:04:30] 2025-11-27 21:03:54,991 | INFO     | job 6886167163 has state=finished
[2025-11-27 22:04:30] 2025-11-27 21:03:54,991 | INFO     | preparing for final server update for job 6886167163 in state='finished'
[2025-11-27 22:04:30] 2025-11-27 21:03:54,991 | INFO     | this job has now completed (state=finished)
[2025-11-27 22:04:30] 2025-11-27 21:03:54,991 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-27 22:04:30] 2025-11-27 21:03:54,991 | INFO     | log transfer has been attempted: DONE
[2025-11-27 22:04:30] 2025-11-27 21:03:54,991 | INFO     | job 6886167163 has finished - writing final server update
[2025-11-27 22:04:30] 2025-11-27 21:03:54,992 | INFO     | total number of processed events: 1000 (read)
[2025-11-27 22:04:30] 2025-11-27 21:03:54,992 | INFO     | executing command: lscpu
[2025-11-27 22:04:30] 2025-11-27 21:03:55,012 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-27 22:04:30] 2025-11-27 21:03:56,366 | INFO     | monitor loop #1240: job 0:6886167163 is in state 'finished'
[2025-11-27 22:04:30] 2025-11-27 21:03:56,366 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:04:30] 2025-11-27 21:03:56,960 | INFO     | time since job start (16638s) is within the limit (172800.0s)
[2025-11-27 22:04:30] 2025-11-27 21:03:57,170 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 22:04:30] 2025-11-27 21:03:57,173 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 5062.7821875
[2025-11-27 22:04:30] 2025-11-27 21:03:57,176 | INFO     | using path: /single_8TB/boinc-client/slots/5/PanDA_Pilot-6886167163/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 22:04:30] 2025-11-27 21:03:57,176 | INFO     | extracted standard info from prmon json
[2025-11-27 22:04:30] 2025-11-27 21:03:57,177 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 22:04:30] 2025-11-27 21:03:57,177 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 22:04:30] 2025-11-27 21:03:57,179 | INFO     | fitting pss+swap vs Time
[2025-11-27 22:04:30] 2025-11-27 21:03:57,179 | INFO     | sum of square deviations: 6309000152.0
[2025-11-27 22:04:30] 2025-11-27 21:03:57,180 | INFO     | sum of deviations: 2008315128690.9998
[2025-11-27 22:04:30] 2025-11-27 21:03:57,180 | INFO     | mean x: 1764269115.0
[2025-11-27 22:04:30] 2025-11-27 21:03:57,181 | INFO     | mean y: 5186482.084249084
[2025-11-27 22:04:30] 2025-11-27 21:03:57,181 | INFO     | intersect: -561606522088.4977
[2025-11-27 22:04:30] 2025-11-27 21:03:57,181 | INFO     | chi2: 12.286878941377648
[2025-11-27 22:04:30] 2025-11-27 21:03:57,181 | INFO     | sum of square deviations: 5968658887.0
[2025-11-27 22:04:30] 2025-11-27 21:03:57,182 | INFO     | sum of deviations: 2055773426523.5
[2025-11-27 22:04:30] 2025-11-27 21:03:57,182 | INFO     | mean x: 1764268962.5
[2025-11-27 22:04:30] 2025-11-27 21:03:57,183 | INFO     | mean y: 5207266.123134328
[2025-11-27 22:04:30] 2025-11-27 21:03:57,183 | INFO     | intersect: -607658477158.4154
[2025-11-27 22:04:30] 2025-11-27 21:03:57,183 | INFO     | chi2: 9.791132729245781
[2025-11-27 22:04:30] 2025-11-27 21:03:57,183 | INFO     | current chi2=9.791132729245781 (change=20.312287799362288 %)
[2025-11-27 22:04:30] 2025-11-27 21:03:57,183 | INFO     | right removable region: 267
[2025-11-27 22:04:30] 2025-11-27 21:03:57,183 | INFO     | sum of square deviations: 5968658887.0
[2025-11-27 22:04:30] 2025-11-27 21:03:57,184 | INFO     | sum of deviations: 1857707211898.5
[2025-11-27 22:04:30] 2025-11-27 21:03:57,184 | INFO     | mean x: 1764269267.5
[2025-11-27 22:04:30] 2025-11-27 21:03:57,184 | INFO     | mean y: 5253782.2798507465
[2025-11-27 22:04:30] 2025-11-27 21:03:57,184 | INFO     | intersect: -549112362757.034
[2025-11-27 22:04:30] 2025-11-27 21:03:57,185 | INFO     | chi2: 10.912206040566266
[2025-11-27 22:04:30] 2025-11-27 21:03:57,185 | INFO     | current chi2=10.912206040566266 (change=11.18813742179874 %)
[2025-11-27 22:04:30] 2025-11-27 21:03:57,185 | INFO     | left removable region: 10
[2025-11-27 22:04:30] 2025-11-27 21:03:57,185 | INFO     | sum of square deviations: 5263458688.0
[2025-11-27 22:04:30] 2025-11-27 21:03:57,186 | INFO     | sum of deviations: 1793496763934.0002
[2025-11-27 22:04:30] 2025-11-27 21:03:57,186 | INFO     | mean x: 1764269237.0
[2025-11-27 22:04:30] 2025-11-27 21:03:57,186 | INFO     | mean y: 5320382.712062256
[2025-11-27 22:04:30] 2025-11-27 21:03:57,186 | INFO     | intersect: -601160444341.878
[2025-11-27 22:04:30] 2025-11-27 21:03:57,186 | INFO     | chi2: 8.313190577821317
[2025-11-27 22:04:30] 2025-11-27 21:03:57,186 | INFO     | current memory leak: 340.74 B/s (using 257 data points, chi2=8.31)
[2025-11-27 22:04:30] 2025-11-27 21:03:57,187 | INFO     | could have reported an average CPU frequency of 5112 MHz (13 samples)
[2025-11-27 22:04:30] 2025-11-27 21:03:57,187 | INFO     | ..............................
[2025-11-27 22:04:30] 2025-11-27 21:03:57,187 | INFO     | . Timing measurements:
[2025-11-27 22:04:30] 2025-11-27 21:03:57,187 | INFO     | . get job = 0 s
[2025-11-27 22:04:30] 2025-11-27 21:03:57,187 | INFO     | . initial setup = 1 s
[2025-11-27 22:04:30] 2025-11-27 21:03:57,187 | INFO     | . payload setup = 5 s
[2025-11-27 22:04:30] 2025-11-27 21:03:57,187 | INFO     | . stage-in = 0 s
[2025-11-27 22:04:30] 2025-11-27 21:03:57,187 | INFO     | . payload execution = 16607 s
[2025-11-27 22:04:30] 2025-11-27 21:03:57,187 | INFO     | . stage-out = 2 s
[2025-11-27 22:04:30] 2025-11-27 21:03:57,187 | INFO     | . log creation = 0 s
[2025-11-27 22:04:30] 2025-11-27 21:03:57,187 | INFO     | ..............................
[2025-11-27 22:04:30] 2025-11-27 21:03:57,232 | INFO     | 
[2025-11-27 22:04:30] 2025-11-27 21:03:57,232 | INFO     | job summary report
[2025-11-27 22:04:30] 2025-11-27 21:03:57,232 | INFO     | --------------------------------------------------
[2025-11-27 22:04:30] 2025-11-27 21:03:57,232 | INFO     | PanDA job id: 6886167163
[2025-11-27 22:04:30] 2025-11-27 21:03:57,232 | INFO     | task id: 47450870
[2025-11-27 22:04:30] 2025-11-27 21:03:57,232 | INFO     | errors: (none)
[2025-11-27 22:04:30] 2025-11-27 21:03:57,232 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 22:04:30] 2025-11-27 21:03:57,232 | INFO     | pilot state: finished 
[2025-11-27 22:04:30] 2025-11-27 21:03:57,232 | INFO     | transexitcode: 0
[2025-11-27 22:04:30] 2025-11-27 21:03:57,232 | INFO     | exeerrorcode: 0
[2025-11-27 22:04:30] 2025-11-27 21:03:57,232 | INFO     | exeerrordiag: 
[2025-11-27 22:04:30] 2025-11-27 21:03:57,232 | INFO     | exitcode: 0
[2025-11-27 22:04:30] 2025-11-27 21:03:57,232 | INFO     | exitmsg: OK
[2025-11-27 22:04:30] 2025-11-27 21:03:57,233 | INFO     | cpuconsumptiontime: 64275 s
[2025-11-27 22:04:30] 2025-11-27 21:03:57,233 | INFO     | nevents: 1000
[2025-11-27 22:04:30] 2025-11-27 21:03:57,233 | INFO     | neventsw: 0
[2025-11-27 22:04:30] 2025-11-27 21:03:57,233 | INFO     | pid: 209239
[2025-11-27 22:04:30] 2025-11-27 21:03:57,233 | INFO     | pgrp: 209239
[2025-11-27 22:04:30] 2025-11-27 21:03:57,233 | INFO     | corecount: 4
[2025-11-27 22:04:30] 2025-11-27 21:03:57,233 | INFO     | event service: False
[2025-11-27 22:04:30] 2025-11-27 21:03:57,233 | INFO     | sizes: {0: 2284523, 2: 2284785, 11: 2284813, 16615: 2336568, 16616: 2336567, 16618: 2345637, 16622: 2345821, 16626: 2346067}
[2025-11-27 22:04:30] 2025-11-27 21:03:57,233 | INFO     | --------------------------------------------------
[2025-11-27 22:04:30] 2025-11-27 21:03:57,233 | INFO     | 
[2025-11-27 22:04:30] 2025-11-27 21:03:57,233 | INFO     | executing command: ls -lF /single_8TB/boinc-client/slots/5
[2025-11-27 22:04:30] 2025-11-27 21:03:57,245 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 22:04:30] 2025-11-27 21:03:57,246 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 22:04:30] 2025-11-27 21:03:57,246 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 22:04:30] 2025-11-27 21:03:57,246 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 22:04:30] 2025-11-27 21:03:57,246 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 22:04:30] 2025-11-27 21:03:57,246 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 22:04:30] 2025-11-27 21:03:57,246 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 22:04:30] 2025-11-27 21:03:57,246 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 22:04:30] 2025-11-27 21:03:57,246 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 22:04:30] 2025-11-27 21:03:57,246 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 22:04:30] 2025-11-27 21:03:57,246 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 22:04:30] 2025-11-27 21:03:57,246 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 22:04:30] 2025-11-27 21:03:57,246 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 22:04:30] 2025-11-27 21:03:57,246 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 22:04:30] 2025-11-27 21:03:57,246 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 22:04:30] 2025-11-27 21:03:57,246 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 22:04:30] 2025-11-27 21:03:57,246 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 22:04:30] 2025-11-27 21:03:57,246 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 22:04:30] 2025-11-27 21:03:57,246 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 22:04:30] 2025-11-27 21:03:57,247 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 22:04:30] 2025-11-27 21:03:57,247 | INFO     | job 6886167163 has completed (purged errors)
[2025-11-27 22:04:30] 2025-11-27 21:03:57,247 | INFO     | overall cleanup function is called
[2025-11-27 22:04:30] 2025-11-27 21:03:58,258 | INFO     | --- collectZombieJob: --- 10, [209239]
[2025-11-27 22:04:30] 2025-11-27 21:03:58,258 | INFO     | zombie collector waiting for pid 209239
[2025-11-27 22:04:30] 2025-11-27 21:03:58,258 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 22:04:30] 2025-11-27 21:03:58,259 | INFO     | collected zombie processes
[2025-11-27 22:04:30] 2025-11-27 21:03:58,259 | INFO     | will attempt to kill all subprocesses of pid=209239
[2025-11-27 22:04:30] 2025-11-27 21:03:58,391 | INFO     | process IDs to be killed: [209239] (in reverse order)
[2025-11-27 22:04:30] 2025-11-27 21:03:58,439 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 22:04:30] 2025-11-27 21:03:58,440 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 22:04:30] 2025-11-27 21:03:58,444 | INFO     | did not find any defunct processes belonging to 209239
[2025-11-27 22:04:30] 2025-11-27 21:03:58,447 | INFO     | did not find any defunct processes belonging to 209239
[2025-11-27 22:04:30] 2025-11-27 21:03:58,448 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 22:04:30] 2025-11-27 21:03:58,448 | INFO     | ready for new job
[2025-11-27 22:04:30] 2025-11-27 21:03:58,448 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 22:04:30] 2025-11-27 21:03:58,449 | INFO     | ***************************************
[2025-11-27 22:04:30] 2025-11-27 21:03:58,449 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 22:04:30] 2025-11-27 21:03:58,449 | INFO     | ***************************************
[2025-11-27 22:04:30] 2025-11-27 21:03:58,449 | INFO     | 
[2025-11-27 22:04:30] 2025-11-27 21:03:58,450 | INFO     | architecture information:
[2025-11-27 22:04:30] 2025-11-27 21:03:58,450 | INFO     | executing command: cat /etc/os-release
[2025-11-27 22:04:30] 2025-11-27 21:03:58,462 | INFO     | cat /etc/os-release:
[2025-11-27 22:04:30] NAME="CentOS Linux"
[2025-11-27 22:04:30] VERSION="7 (Core)"
[2025-11-27 22:04:30] ID="centos"
[2025-11-27 22:04:30] ID_LIKE="rhel fedora"
[2025-11-27 22:04:30] VERSION_ID="7"
[2025-11-27 22:04:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 22:04:30] ANSI_COLOR="0;31"
[2025-11-27 22:04:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 22:04:30] HOME_URL="https://www.centos.org/"
[2025-11-27 22:04:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 22:04:30] 
[2025-11-27 22:04:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 22:04:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 22:04:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 22:04:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 22:04:30] 
[2025-11-27 22:04:30] 2025-11-27 21:03:58,462 | INFO     | ***************************************
[2025-11-27 22:04:30] 2025-11-27 21:03:58,965 | INFO     | executing command: df -mP /single_8TB/boinc-client/slots/5
[2025-11-27 22:04:30] 2025-11-27 21:03:58,975 | INFO     | sufficient remaining disk space (950464937984 B)
[2025-11-27 22:04:30] 2025-11-27 21:03:58,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 22:04:30] 2025-11-27 21:03:58,975 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 22:04:30] 2025-11-27 21:03:58,975 | INFO     | update_server=False
[2025-11-27 22:04:30] 2025-11-27 21:03:58,975 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 22:04:30] 2025-11-27 21:03:58,975 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 22:04:30] 2025-11-27 21:03:58,975 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:04:30] 2025-11-27 21:03:59,332 | INFO     | all payload control threads have been joined
[2025-11-27 22:04:30] 2025-11-27 21:03:59,626 | INFO     | all data control threads have been joined
[2025-11-27 22:04:30] 2025-11-27 21:03:59,858 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 22:04:30] 2025-11-27 21:03:59,874 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:04:30] 2025-11-27 21:03:59,874 | INFO     | aborting loop
[2025-11-27 22:04:30] 2025-11-27 21:03:59,980 | INFO     | [job] retrieve thread has finished
[2025-11-27 22:04:30] 2025-11-27 21:03:59,982 | INFO     | [job] queue monitor thread has finished
[2025-11-27 22:04:30] 2025-11-27 21:04:00,051 | INFO     | [data] copytool_in thread has finished
[2025-11-27 22:04:30] 2025-11-27 21:04:00,284 | INFO     | [payload] failed_post thread has finished
[2025-11-27 22:04:30] 2025-11-27 21:04:00,338 | INFO     | [payload] control thread has finished
[2025-11-27 22:04:30] 2025-11-27 21:04:00,344 | INFO     | all job control threads have been joined
[2025-11-27 22:04:30] 2025-11-27 21:04:00,519 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 22:04:30] 2025-11-27 21:04:00,544 | INFO     | [job] validate thread has finished
[2025-11-27 22:04:30] 2025-11-27 21:04:00,632 | INFO     | [data] control thread has finished
[2025-11-27 22:04:30] 2025-11-27 21:04:00,764 | INFO     | [payload] validate_post thread has finished
[2025-11-27 22:04:30] 2025-11-27 21:04:00,879 | INFO     | [job] job monitor thread has finished
[2025-11-27 22:04:30] 2025-11-27 21:04:01,056 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 22:04:30] 2025-11-27 21:04:01,144 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 22:04:30] 2025-11-27 21:04:01,349 | INFO     | [job] control thread has finished
[2025-11-27 22:04:30] 2025-11-27 21:04:01,863 | INFO     | [data] copytool_out thread has finished
[2025-11-27 22:04:30] 2025-11-27 21:04:02,981 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 22:04:30] 2025-11-27 21:04:05,445 | INFO     | [monitor] cgroup control has ended
[2025-11-27 22:04:30] 2025-11-27 21:04:09,419 | INFO     | job.realtimelogging is not enabled
[2025-11-27 22:04:30] 2025-11-27 21:04:10,424 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 22:04:30] 2025-11-27 21:04:11,143 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130151878039360)>', '<ExcThread(monitor, started 130151065057024)>']
[2025-11-27 22:04:30] 2025-11-27 21:04:16,168 | INFO     | all workflow threads have been joined
[2025-11-27 22:04:30] 2025-11-27 21:04:16,168 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 22:04:30] 2025-11-27 21:04:16,168 | INFO     | traces error code: 0
[2025-11-27 22:04:30] 2025-11-27 21:04:16,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 22:04:30] 2025-11-27 21:04:30,192 | INFO     | PID=197661 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 22:04:30] 2025-11-27 21:04:30,192 | INFO     | .. there are 8 such processes running
[2025-11-27 22:04:30] 2025-11-27 21:04:30,193 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 22:04:30] 2025-11-27 21:04:30,193 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 22:04:30] 2025-11-27 21:04:30,193 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 22:04:30] 2025-11-27 21:04:30,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 22:04:30] 2025-11-27 21:04:30,193 | INFO     | [monitor] control thread has ended
[2025-11-27 22:04:30] 2025-11-27 21:04:30,267 [wrapper] ==== pilot stdout END ====
[2025-11-27 22:04:30] 2025-11-27 21:04:30,269 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 22:04:30] 2025-11-27 21:04:30,271 [wrapper] pilotpid: 197661
[2025-11-27 22:04:30] 2025-11-27 21:04:30,273 [wrapper] Pilot exit status: 0
[2025-11-27 22:04:30] 2025-11-27 21:04:30,281 [wrapper] pandaids: 6886167163
[2025-11-27 22:04:30] 2025-11-27 21:04:30,313 [wrapper] cleanup supervisor_pilot  519121 197662
[2025-11-27 22:04:30] 2025-11-27 21:04:30,315 [wrapper] Test setup, not cleaning
[2025-11-27 22:04:30] 2025-11-27 21:04:30,316 [wrapper] apfmon messages muted
[2025-11-27 22:04:30] 2025-11-27 21:04:30,318 [wrapper] ==== wrapper stdout END ====
[2025-11-27 22:04:30] 2025-11-27 21:04:30,319 [wrapper] ==== wrapper stderr END ====
[2025-11-27 22:04:30]  *** Error codes and diagnostics ***
[2025-11-27 22:04:30]     "exeErrorCode": 0,
[2025-11-27 22:04:30]     "exeErrorDiag": "",
[2025-11-27 22:04:30]     "pilotErrorCode": 0,
[2025-11-27 22:04:30]     "pilotErrorDiag": "",
[2025-11-27 22:04:30]  *** Listing of results directory ***
[2025-11-27 22:04:30] total 932704
[2025-11-27 22:04:30] -rw-r--r-- 1 boinc boinc    576529 Nov 14 15:24 pilot3.tar.gz
[2025-11-27 22:04:30] -rwx------ 1 boinc boinc     36292 Nov 14 15:33 runpilot2-wrapper.sh
[2025-11-27 22:04:30] -rw-r--r-- 1 boinc boinc      5112 Nov 14 15:33 queuedata.json
[2025-11-27 22:04:30] -rw-r--r-- 1 boinc boinc       100 Nov 27 17:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 22:04:30] -rw-r--r-- 1 boinc boinc       105 Nov 27 17:26 job.xml
[2025-11-27 22:04:30] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 17:26 run_atlas
[2025-11-27 22:04:30] -rw-r--r-- 2 boinc boinc 375076819 Nov 27 17:26 EVNT.14545720._000121.pool.root.1
[2025-11-27 22:04:30] drwxrwx--x 2 boinc boinc         5 Nov 27 17:26 shared
[2025-11-27 22:04:30] -rw-r--r-- 2 boinc boinc    590119 Nov 27 17:26 input.tar.gz
[2025-11-27 22:04:30] -rw-r--r-- 1 boinc boinc         0 Nov 27 17:26 boinc_setup_complete
[2025-11-27 22:04:30] -rw-r--r-- 1 boinc boinc      6806 Nov 27 17:26 init_data.xml
[2025-11-27 22:04:30] -rw-r--r-- 2 boinc boinc     15120 Nov 27 17:26 start_atlas.sh
[2025-11-27 22:04:30] -rw-r--r-- 1 boinc boinc         0 Nov 27 17:26 boinc_lockfile
[2025-11-27 22:04:30] -rw-r--r-- 1 boinc boinc      2930 Nov 27 17:26 pandaJob.out
[2025-11-27 22:04:30] -rw------- 1 boinc boinc    991572 Nov 27 17:26 agis_schedconf.cvmfs.json
[2025-11-27 22:04:30] drwx------ 5 boinc boinc        22 Nov 27 17:26 pilot3
[2025-11-27 22:04:30] -rw-r--r-- 1 boinc boinc       531 Nov 27 22:01 boinc_task_state.xml
[2025-11-27 22:04:30] -rw------- 1 boinc boinc 571614023 Nov 27 22:03 HITS.47450870._001030.pool.root.1
[2025-11-27 22:04:30] -rw------- 1 boinc boinc      1068 Nov 27 22:03 memory_monitor_summary.json
[2025-11-27 22:04:30] -rw------- 1 boinc boinc   1516240 Nov 27 22:03 agis_ddmendpoints.agis.ALL.json
[2025-11-27 22:04:30] -rw------- 1 boinc boinc   1226726 Nov 27 22:03 log.47450870._001030.job.log.tgz.1
[2025-11-27 22:04:30] -rw------- 1 boinc boinc     27501 Nov 27 22:03 heartbeat.json
[2025-11-27 22:04:30] -rw-r--r-- 1 boinc boinc      8192 Nov 27 22:04 boinc_mmap_file
[2025-11-27 22:04:30] -rw-r--r-- 1 boinc boinc        28 Nov 27 22:04 wrapper_checkpoint.txt
[2025-11-27 22:04:30] -rw------- 1 boinc boinc       821 Nov 27 22:04 pilotlog.txt
[2025-11-27 22:04:30] -rw------- 1 boinc boinc        95 Nov 27 22:04 pilot_heartbeat.json
[2025-11-27 22:04:30] -rw------- 1 boinc boinc   2405469 Nov 27 22:04 log.47450870._001030.job.log.1
[2025-11-27 22:04:30] -rw------- 1 boinc boinc       353 Nov 27 22:04 output.list
[2025-11-27 22:04:30] -rw-r--r-- 1 boinc boinc       620 Nov 27 22:04 runtime_log
[2025-11-27 22:04:30] -rw------- 1 boinc boinc   3665920 Nov 27 22:04 result.tar.gz
[2025-11-27 22:04:30] -rw------- 1 boinc boinc       661 Nov 27 22:04 6KXNDmm29d8n9Rq4apOajLDm4fhM0noT9bVof3QYDmInqMDm12ndan.diag
[2025-11-27 22:04:30] -rw-r--r-- 1 boinc boinc      8806 Nov 27 22:04 runtime_log.err
[2025-11-27 22:04:30] -rw-r--r-- 1 boinc boinc     21835 Nov 27 22:04 stderr.txt
[2025-11-27 22:04:30] HITS file was successfully produced:
[2025-11-27 22:04:30] -rw------- 1 boinc boinc 571614023 Nov 27 22:03 shared/HITS.pool.root.1
[2025-11-27 22:04:30]  *** Contents of shared directory: ***
[2025-11-27 22:04:30] total 925848
[2025-11-27 22:04:30] -rw-r--r-- 2 boinc boinc 375076819 Nov 27 17:26 ATLAS.root_0
[2025-11-27 22:04:30] -rw-r--r-- 2 boinc boinc    590119 Nov 27 17:26 input.tar.gz
[2025-11-27 22:04:30] -rw-r--r-- 2 boinc boinc     15120 Nov 27 17:26 start_atlas.sh
[2025-11-27 22:04:30] -rw------- 1 boinc boinc 571614023 Nov 27 22:03 HITS.pool.root.1
[2025-11-27 22:04:30] -rw------- 1 boinc boinc   3665920 Nov 27 22:04 result.tar.gz
22:04:31 (193817): run_atlas exited; CPU time 64257.509280
22:04:31 (193817): called boinc_finish(0)

</stderr_txt>
]]>

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