Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:42:15 (41084): wrapper (7.7.26015): starting
02:42:15 (41084): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 02:42:15] Arguments: --nthreads 8
[2025-11-26 02:42:15] Threads: 8
[2025-11-26 02:42:15] Checking for CVMFS
[2025-11-26 02:42:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 02:42:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 02:42:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 02:42:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 02:42:15] 2.11.2.0 5808 170086 110380 153314 3 82 10119444 18432001 2827 130560 0 113238831 99.945 9008527 6971 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-26 02:42:15] CVMFS is ok
[2025-11-26 02:42:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 02:42:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 02:42:15] Further information can be found at the LHC@home message board.
[2025-11-26 02:42:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 02:42:15] Checking for apptainer binary...
[2025-11-26 02:42:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 02:42:15] Running /usr/bin/apptainer --version
[2025-11-26 02:42:16] apptainer version 1.3.2-1.el7
[2025-11-26 02:42:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 02:42:16] c-9-34.aglt2.org
[2025-11-26 02:42:16] apptainer works
[2025-11-26 02:42:16] Set ATHENA_PROC_NUMBER=8
[2025-11-26 02:42:16] Set ATHENA_CORE_NUMBER=8
[2025-11-26 02:42:16] Starting ATLAS job with PandaID=6896766800
[2025-11-26 02:42:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 19:52:32]  *** The last 200 lines of the pilot log: ***
[2025-11-26 19:52:32] 2025-11-27 00:51:59,375 | INFO     | time since job start (61772s) is within the limit (172800.0s)
[2025-11-26 19:52:32] 2025-11-27 00:51:59,554 | INFO     | monitor loop #4269: job 0:6896766800 is in state 'finished'
[2025-11-26 19:52:32] 2025-11-27 00:51:59,554 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 19:52:32] 2025-11-27 00:52:00,850 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 19:52:32] 2025-11-27 00:52:00,854 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2999.946625000001
[2025-11-26 19:52:32] 2025-11-27 00:52:00,858 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6896766800/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 19:52:32] 2025-11-27 00:52:00,858 | INFO     | extracted standard info from prmon json
[2025-11-26 19:52:32] 2025-11-27 00:52:00,858 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 19:52:32] 2025-11-27 00:52:00,858 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 19:52:32] 2025-11-27 00:52:00,870 | INFO     | fitting pss+swap vs Time
[2025-11-26 19:52:32] 2025-11-27 00:52:00,871 | INFO     | sum of square deviations: 321381964349.30035
[2025-11-26 19:52:32] 2025-11-27 00:52:00,887 | INFO     | sum of deviations: 1627307055739.0627
[2025-11-26 19:52:32] 2025-11-27 00:52:00,887 | INFO     | mean x: 1764173810.2193675
[2025-11-26 19:52:32] 2025-11-27 00:52:00,887 | INFO     | mean y: 2870077.945652174
[2025-11-26 19:52:32] 2025-11-27 00:52:00,887 | INFO     | intersect: -8929966258.196098
[2025-11-26 19:52:32] 2025-11-27 00:52:00,888 | INFO     | chi2: 4.561474595801752
[2025-11-26 19:52:32] 2025-11-27 00:52:00,889 | INFO     | sum of square deviations: 316642134721.69965
[2025-11-26 19:52:32] 2025-11-27 00:52:00,905 | INFO     | sum of deviations: 1891364992297.7246
[2025-11-26 19:52:32] 2025-11-27 00:52:00,905 | INFO     | mean x: 1764173657.7229395
[2025-11-26 19:52:32] 2025-11-27 00:52:00,905 | INFO     | mean y: 2878568.457795432
[2025-11-26 19:52:32] 2025-11-27 00:52:00,905 | INFO     | intersect: -10534873457.133038
[2025-11-26 19:52:32] 2025-11-27 00:52:00,906 | INFO     | chi2: 2.4900360685847116
[2025-11-26 19:52:32] 2025-11-27 00:52:00,906 | INFO     | current chi2=2.4900360685847116 (change=45.41159845817254 %)
[2025-11-26 19:52:32] 2025-11-27 00:52:00,907 | INFO     | sum of square deviations: 311949143181.5741
[2025-11-26 19:52:32] 2025-11-27 00:52:00,936 | INFO     | sum of deviations: 2015711739370.5894
[2025-11-26 19:52:32] 2025-11-27 00:52:00,936 | INFO     | mean x: 1764173505.226547
[2025-11-26 19:52:32] 2025-11-27 00:52:00,936 | INFO     | mean y: 2882605.8123752493
[2025-11-26 19:52:32] 2025-11-27 00:52:00,936 | INFO     | intersect: -11396620558.40006
[2025-11-26 19:52:32] 2025-11-27 00:52:00,938 | INFO     | chi2: 1.9281871683270375
[2025-11-26 19:52:32] 2025-11-27 00:52:00,938 | INFO     | current chi2=1.9281871683270375 (change=22.56388601539488 %)
[2025-11-26 19:52:32] 2025-11-27 00:52:00,938 | INFO     | right removable region: 1001
[2025-11-26 19:52:32] 2025-11-27 00:52:00,939 | INFO     | sum of square deviations: 316641690641.7
[2025-11-26 19:52:32] 2025-11-27 00:52:00,970 | INFO     | sum of deviations: 1401669563680.078
[2025-11-26 19:52:32] 2025-11-27 00:52:00,970 | INFO     | mean x: 1764173962.7229395
[2025-11-26 19:52:32] 2025-11-27 00:52:00,971 | INFO     | mean y: 2877324.8927507447
[2025-11-26 19:52:32] 2025-11-27 00:52:00,971 | INFO     | intersect: -7806545823.31717
[2025-11-26 19:52:32] 2025-11-27 00:52:00,972 | INFO     | chi2: 2.852492368115087
[2025-11-26 19:52:32] 2025-11-27 00:52:00,972 | INFO     | current chi2=2.852492368115087 (change=37.46556495698918 %)
[2025-11-26 19:52:32] 2025-11-27 00:52:00,974 | INFO     | sum of square deviations: 311948316693.0259
[2025-11-26 19:52:32] 2025-11-27 00:52:01,005 | INFO     | sum of deviations: 1340390593302.2664
[2025-11-26 19:52:32] 2025-11-27 00:52:01,005 | INFO     | mean x: 1764174115.225549
[2025-11-26 19:52:32] 2025-11-27 00:52:01,005 | INFO     | mean y: 2879315.786427146
[2025-11-26 19:52:32] 2025-11-27 00:52:01,005 | INFO     | intersect: -7577486605.285846
[2025-11-26 19:52:32] 2025-11-27 00:52:01,007 | INFO     | chi2: 2.8104855060061515
[2025-11-26 19:52:32] 2025-11-27 00:52:01,007 | INFO     | current chi2=2.8104855060061515 (change=1.4726371428188425 %)
[2025-11-26 19:52:32] 2025-11-27 00:52:01,007 | INFO     | left removable region: 20
[2025-11-26 19:52:32] 2025-11-27 00:52:01,008 | INFO     | sum of square deviations: 292743267888.6196
[2025-11-26 19:52:32] 2025-11-27 00:52:01,023 | INFO     | sum of deviations: 1643360346565.1274
[2025-11-26 19:52:32] 2025-11-27 00:52:01,023 | INFO     | mean x: 1764174084.7359836
[2025-11-26 19:52:32] 2025-11-27 00:52:01,023 | INFO     | mean y: 2895018.4638124364
[2025-11-26 19:52:32] 2025-11-27 00:52:01,023 | INFO     | intersect: -9900573492.367987
[2025-11-26 19:52:32] 2025-11-27 00:52:01,024 | INFO     | chi2: 0.14812355816353973
[2025-11-26 19:52:32] 2025-11-27 00:52:01,024 | INFO     | current memory leak: 5.61 B/s (using 981 data points, chi2=0.15)
[2025-11-26 19:52:32] 2025-11-27 00:52:01,025 | INFO     | could have reported an average CPU frequency of 2999 MHz (37 samples)
[2025-11-26 19:52:32] 2025-11-27 00:52:01,025 | INFO     | ..............................
[2025-11-26 19:52:32] 2025-11-27 00:52:01,025 | INFO     | . Timing measurements:
[2025-11-26 19:52:32] 2025-11-27 00:52:01,025 | INFO     | . get job = 0 s
[2025-11-26 19:52:32] 2025-11-27 00:52:01,025 | INFO     | . initial setup = 2 s
[2025-11-26 19:52:32] 2025-11-27 00:52:01,025 | INFO     | . payload setup = 5 s
[2025-11-26 19:52:32] 2025-11-27 00:52:01,025 | INFO     | . stage-in = 0 s
[2025-11-26 19:52:32] 2025-11-27 00:52:01,026 | INFO     | . payload execution = 61735 s
[2025-11-26 19:52:32] 2025-11-27 00:52:01,026 | INFO     | . stage-out = 4 s
[2025-11-26 19:52:32] 2025-11-27 00:52:01,026 | INFO     | . log creation = 0 s
[2025-11-26 19:52:32] 2025-11-27 00:52:01,026 | INFO     | ..............................
[2025-11-26 19:52:32] 2025-11-27 00:52:01,100 | INFO     | 
[2025-11-26 19:52:32] 2025-11-27 00:52:01,100 | INFO     | job summary report
[2025-11-26 19:52:32] 2025-11-27 00:52:01,100 | INFO     | --------------------------------------------------
[2025-11-26 19:52:32] 2025-11-27 00:52:01,100 | INFO     | PanDA job id: 6896766800
[2025-11-26 19:52:32] 2025-11-27 00:52:01,101 | INFO     | task id: 47556185
[2025-11-26 19:52:32] 2025-11-27 00:52:01,101 | INFO     | errors: (none)
[2025-11-26 19:52:32] 2025-11-27 00:52:01,101 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 19:52:32] 2025-11-27 00:52:01,101 | INFO     | pilot state: finished 
[2025-11-26 19:52:32] 2025-11-27 00:52:01,101 | INFO     | transexitcode: 0
[2025-11-26 19:52:32] 2025-11-27 00:52:01,101 | INFO     | exeerrorcode: 0
[2025-11-26 19:52:32] 2025-11-27 00:52:01,101 | INFO     | exeerrordiag: 
[2025-11-26 19:52:32] 2025-11-27 00:52:01,102 | INFO     | exitcode: 0
[2025-11-26 19:52:32] 2025-11-27 00:52:01,102 | INFO     | exitmsg: OK
[2025-11-26 19:52:32] 2025-11-27 00:52:01,102 | INFO     | cpuconsumptiontime: 475315 s
[2025-11-26 19:52:32] 2025-11-27 00:52:01,102 | INFO     | nevents: 1000
[2025-11-26 19:52:32] 2025-11-27 00:52:01,102 | INFO     | neventsw: 0
[2025-11-26 19:52:32] 2025-11-27 00:52:01,102 | INFO     | pid: 3347
[2025-11-26 19:52:32] 2025-11-27 00:52:01,102 | INFO     | pgrp: 3347
[2025-11-26 19:52:32] 2025-11-27 00:52:01,103 | INFO     | corecount: 8
[2025-11-26 19:52:32] 2025-11-27 00:52:01,103 | INFO     | event service: False
[2025-11-26 19:52:32] 2025-11-27 00:52:01,103 | INFO     | sizes: {0: 2284312, 5: 2284574, 11: 2284630, 61743: 2337403, 61744: 2337402, 61749: 2346452, 61753: 2346636, 61758: 2346882}
[2025-11-26 19:52:32] 2025-11-27 00:52:01,103 | INFO     | --------------------------------------------------
[2025-11-26 19:52:32] 2025-11-27 00:52:01,103 | INFO     | 
[2025-11-26 19:52:32] 2025-11-27 00:52:01,103 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 19:52:32] 2025-11-27 00:52:01,123 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 19:52:32] 2025-11-27 00:52:01,123 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 19:52:32] 2025-11-27 00:52:01,123 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 19:52:32] 2025-11-27 00:52:01,123 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 19:52:32] 2025-11-27 00:52:01,123 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 19:52:32] 2025-11-27 00:52:01,124 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 19:52:32] 2025-11-27 00:52:01,124 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 19:52:32] 2025-11-27 00:52:01,124 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 19:52:32] 2025-11-27 00:52:01,124 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 19:52:32] 2025-11-27 00:52:01,124 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 19:52:32] 2025-11-27 00:52:01,124 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 19:52:32] 2025-11-27 00:52:01,125 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 19:52:32] 2025-11-27 00:52:01,125 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 19:52:32] 2025-11-27 00:52:01,125 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 19:52:32] 2025-11-27 00:52:01,125 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 19:52:32] 2025-11-27 00:52:01,125 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 19:52:32] 2025-11-27 00:52:01,125 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 19:52:32] 2025-11-27 00:52:01,125 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 19:52:32] 2025-11-27 00:52:01,126 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 19:52:32] 2025-11-27 00:52:01,126 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 19:52:32] 2025-11-27 00:52:01,126 | INFO     | job 6896766800 has completed (purged errors)
[2025-11-26 19:52:32] 2025-11-27 00:52:01,126 | INFO     | overall cleanup function is called
[2025-11-26 19:52:32] 2025-11-27 00:52:02,142 | INFO     | --- collectZombieJob: --- 10, [3347]
[2025-11-26 19:52:32] 2025-11-27 00:52:02,142 | INFO     | zombie collector waiting for pid 3347
[2025-11-26 19:52:32] 2025-11-27 00:52:02,142 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 19:52:32] 2025-11-27 00:52:02,142 | INFO     | collected zombie processes
[2025-11-26 19:52:32] 2025-11-27 00:52:02,143 | INFO     | will attempt to kill all subprocesses of pid=3347
[2025-11-26 19:52:32] 2025-11-27 00:52:02,395 | INFO     | process IDs to be killed: [3347] (in reverse order)
[2025-11-26 19:52:32] 2025-11-27 00:52:02,475 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 19:52:32] 2025-11-27 00:52:02,475 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 19:52:32] 2025-11-27 00:52:02,481 | INFO     | did not find any defunct processes belonging to 3347
[2025-11-26 19:52:32] 2025-11-27 00:52:02,486 | INFO     | did not find any defunct processes belonging to 3347
[2025-11-26 19:52:32] 2025-11-27 00:52:02,487 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 19:52:32] 2025-11-27 00:52:02,487 | INFO     | ready for new job
[2025-11-26 19:52:32] 2025-11-27 00:52:02,487 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 19:52:32] 2025-11-27 00:52:02,491 | INFO     | ***************************************
[2025-11-26 19:52:32] 2025-11-27 00:52:02,491 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 19:52:32] 2025-11-27 00:52:02,491 | INFO     | ***************************************
[2025-11-26 19:52:32] 2025-11-27 00:52:02,491 | INFO     | 
[2025-11-26 19:52:32] 2025-11-27 00:52:02,492 | INFO     | architecture information:
[2025-11-26 19:52:32] 2025-11-27 00:52:02,493 | INFO     | executing command: cat /etc/os-release
[2025-11-26 19:52:32] 2025-11-27 00:52:02,502 | INFO     | cat /etc/os-release:
[2025-11-26 19:52:32] NAME="CentOS Linux"
[2025-11-26 19:52:32] VERSION="7 (Core)"
[2025-11-26 19:52:32] ID="centos"
[2025-11-26 19:52:32] ID_LIKE="rhel fedora"
[2025-11-26 19:52:32] VERSION_ID="7"
[2025-11-26 19:52:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 19:52:32] ANSI_COLOR="0;31"
[2025-11-26 19:52:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 19:52:32] HOME_URL="https://www.centos.org/"
[2025-11-26 19:52:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 19:52:32] 
[2025-11-26 19:52:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 19:52:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 19:52:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 19:52:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 19:52:32] 
[2025-11-26 19:52:32] 2025-11-27 00:52:02,502 | INFO     | ***************************************
[2025-11-26 19:52:32] 2025-11-27 00:52:03,004 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 19:52:32] 2025-11-27 00:52:03,019 | INFO     | sufficient remaining disk space (100407443456 B)
[2025-11-26 19:52:32] 2025-11-27 00:52:03,020 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 19:52:32] 2025-11-27 00:52:03,020 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 19:52:32] 2025-11-27 00:52:03,020 | INFO     | update_server=False
[2025-11-26 19:52:32] 2025-11-27 00:52:03,020 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 19:52:32] 2025-11-27 00:52:03,021 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:52:32] 2025-11-27 00:52:03,021 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 19:52:32] 2025-11-27 00:52:03,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:52:32] 2025-11-27 00:52:03,062 | INFO     | aborting loop
[2025-11-26 19:52:32] 2025-11-27 00:52:03,987 | INFO     | all data control threads have been joined
[2025-11-26 19:52:32] 2025-11-27 00:52:04,006 | INFO     | all job control threads have been joined
[2025-11-26 19:52:32] 2025-11-27 00:52:04,025 | INFO     | [job] retrieve thread has finished
[2025-11-26 19:52:32] 2025-11-27 00:52:04,026 | INFO     | [job] queue monitor thread has finished
[2025-11-26 19:52:32] 2025-11-27 00:52:04,068 | INFO     | [job] job monitor thread has finished
[2025-11-26 19:52:32] 2025-11-27 00:52:04,073 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 19:52:32] 2025-11-27 00:52:04,122 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 19:52:32] 2025-11-27 00:52:04,123 | INFO     | [data] copytool_in thread has finished
[2025-11-26 19:52:32] 2025-11-27 00:52:04,158 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 19:52:32] 2025-11-27 00:52:04,234 | INFO     | [payload] validate_post thread has finished
[2025-11-26 19:52:32] 2025-11-27 00:52:04,478 | INFO     | all payload control threads have been joined
[2025-11-26 19:52:32] 2025-11-27 00:52:04,988 | INFO     | [data] control thread has finished
[2025-11-26 19:52:32] 2025-11-27 00:52:05,011 | INFO     | [job] control thread has finished
[2025-11-26 19:52:32] 2025-11-27 00:52:05,026 | INFO     | [data] copytool_out thread has finished
[2025-11-26 19:52:32] 2025-11-27 00:52:05,172 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 19:52:32] 2025-11-27 00:52:05,253 | INFO     | [payload] failed_post thread has finished
[2025-11-26 19:52:32] 2025-11-27 00:52:05,434 | INFO     | [job] validate thread has finished
[2025-11-26 19:52:32] 2025-11-27 00:52:05,483 | INFO     | [payload] control thread has finished
[2025-11-26 19:52:32] 2025-11-27 00:52:06,368 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 19:52:32] 2025-11-27 00:52:10,370 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 19:52:32] 2025-11-27 00:52:11,248 | INFO     | [monitor] cgroup control has ended
[2025-11-26 19:52:32] 2025-11-27 00:52:12,254 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140691590367040)>', '<ExcThread(monitor, started 140691141273344)>']
[2025-11-26 19:52:32] 2025-11-27 00:52:17,279 | INFO     | all workflow threads have been joined
[2025-11-26 19:52:32] 2025-11-27 00:52:17,279 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 19:52:32] 2025-11-27 00:52:17,279 | INFO     | traces error code: 0
[2025-11-26 19:52:32] 2025-11-27 00:52:17,280 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 19:52:32] 2025-11-27 00:52:32,685 | INFO     | PID=44976 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 19:52:32] 2025-11-27 00:52:32,685 | INFO     | .. there are 4 such processes running
[2025-11-26 19:52:32] 2025-11-27 00:52:32,685 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 19:52:32] 2025-11-27 00:52:32,686 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 19:52:32] 2025-11-27 00:52:32,686 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 19:52:32] 2025-11-27 00:52:32,686 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 19:52:32] 2025-11-27 00:52:32,686 | INFO     | [monitor] control thread has ended
[2025-11-26 19:52:32] 2025-11-27 00:52:32,787 [wrapper] ==== pilot stdout END ====
[2025-11-26 19:52:32] 2025-11-27 00:52:32,789 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 19:52:32] 2025-11-27 00:52:32,791 [wrapper] pilotpid: 44976
[2025-11-26 19:52:32] 2025-11-27 00:52:32,793 [wrapper] Pilot exit status: 0
[2025-11-26 19:52:32] 2025-11-27 00:52:32,802 [wrapper] pandaids: 6896766800
[2025-11-26 19:52:32] 2025-11-27 00:52:32,844 [wrapper] cleanup supervisor_pilot 15299 44977
[2025-11-26 19:52:32] 2025-11-27 00:52:32,848 [wrapper] Test setup, not cleaning
[2025-11-26 19:52:32] 2025-11-27 00:52:32,850 [wrapper] apfmon messages muted
[2025-11-26 19:52:32] 2025-11-27 00:52:32,853 [wrapper] ==== wrapper stdout END ====
[2025-11-26 19:52:32] 2025-11-27 00:52:32,855 [wrapper] ==== wrapper stderr END ====
[2025-11-26 19:52:32]  *** Error codes and diagnostics ***
[2025-11-26 19:52:32]     "exeErrorCode": 0,
[2025-11-26 19:52:32]     "exeErrorDiag": "",
[2025-11-26 19:52:32]     "pilotErrorCode": 0,
[2025-11-26 19:52:32]     "pilotErrorDiag": "",
[2025-11-26 19:52:32]  *** Listing of results directory ***
[2025-11-26 19:52:33] total 1317968
[2025-11-26 19:52:33] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 04:44 pilot3.tar.gz
[2025-11-26 19:52:33] -rwx------ 1 boincer umatlas     36292 Nov 25 05:11 runpilot2-wrapper.sh
[2025-11-26 19:52:33] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 05:11 queuedata.json
[2025-11-26 19:52:33] -rw-r--r-- 1 boincer umatlas       100 Nov 26 02:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 19:52:33] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 02:42 run_atlas
[2025-11-26 19:52:33] -rw-r--r-- 1 boincer umatlas       105 Nov 26 02:42 job.xml
[2025-11-26 19:52:33] -rw-r--r-- 2 boincer umatlas 411150992 Nov 26 02:42 EVNT.47483658._004282.pool.root.1
[2025-11-26 19:52:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 02:42 start_atlas.sh
[2025-11-26 19:52:33] drwxrwx--x 2 boincer umatlas      4096 Nov 26 02:42 shared
[2025-11-26 19:52:33] -rw-r--r-- 2 boincer umatlas    590104 Nov 26 02:42 input.tar.gz
[2025-11-26 19:52:33] -rw-r--r-- 1 boincer umatlas         0 Nov 26 02:42 boinc_lockfile
[2025-11-26 19:52:33] -rw-r--r-- 1 boincer umatlas      2784 Nov 26 02:42 pandaJob.out
[2025-11-26 19:52:33] -rw------- 1 boincer umatlas        57 Nov 26 02:42 setup.sh.local
[2025-11-26 19:52:33] -rw------- 1 boincer umatlas    991877 Nov 26 02:42 agis_schedconf.cvmfs.json
[2025-11-26 19:52:33] drwx------ 5 boincer umatlas      4096 Nov 26 02:42 pilot3
[2025-11-26 19:52:33] -rw-r--r-- 1 boincer umatlas       532 Nov 26 19:40 boinc_task_state.xml
[2025-11-26 19:52:33] -rw-r--r-- 1 boincer umatlas      6038 Nov 26 19:48 init_data.xml
[2025-11-26 19:52:33] -rw------- 1 boincer umatlas 913329581 Nov 26 19:51 HITS.47556185._000454.pool.root.1
[2025-11-26 19:52:33] -rw------- 1 boincer umatlas      1064 Nov 26 19:51 memory_monitor_summary.json
[2025-11-26 19:52:33] -rw------- 1 boincer umatlas   1516240 Nov 26 19:51 agis_ddmendpoints.agis.ALL.json
[2025-11-26 19:52:33] -rw------- 1 boincer umatlas   2201164 Nov 26 19:51 log.47556185._000454.job.log.tgz.1
[2025-11-26 19:52:33] -rw------- 1 boincer umatlas        95 Nov 26 19:52 pilot_heartbeat.json
[2025-11-26 19:52:33] -rw------- 1 boincer umatlas      8660 Nov 26 19:52 heartbeat.json
[2025-11-26 19:52:33] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 19:52 boinc_mmap_file
[2025-11-26 19:52:33] -rw-r--r-- 1 boincer umatlas        29 Nov 26 19:52 wrapper_checkpoint.txt
[2025-11-26 19:52:33] -rw------- 1 boincer umatlas       820 Nov 26 19:52 pilotlog.txt
[2025-11-26 19:52:33] -rw------- 1 boincer umatlas   8402812 Nov 26 19:52 log.47556185._000454.job.log.1
[2025-11-26 19:52:33] -rw------- 1 boincer umatlas       353 Nov 26 19:52 output.list
[2025-11-26 19:52:33] -rw-r--r-- 1 boincer umatlas       620 Nov 26 19:52 runtime_log
[2025-11-26 19:52:33] -rw------- 1 boincer umatlas  10618880 Nov 26 19:52 result.tar.gz
[2025-11-26 19:52:33] -rw-r--r-- 1 boincer umatlas      9333 Nov 26 19:52 runtime_log.err
[2025-11-26 19:52:33] -rw------- 1 boincer umatlas       665 Nov 26 19:52 caXKDmSC5h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0PJKDm947mim.diag
[2025-11-26 19:52:33] -rw-r--r-- 1 boincer umatlas     21301 Nov 26 19:52 stderr.txt
[2025-11-26 19:52:33] HITS file was successfully produced:
[2025-11-26 19:52:33] -rw------- 1 boincer umatlas 913329581 Nov 26 19:51 shared/HITS.pool.root.1
[2025-11-26 19:52:33]  *** Contents of shared directory: ***
[2025-11-26 19:52:33] total 1304412
[2025-11-26 19:52:33] -rw-r--r-- 2 boincer umatlas 411150992 Nov 26 02:42 ATLAS.root_0
[2025-11-26 19:52:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 02:42 start_atlas.sh
[2025-11-26 19:52:33] -rw-r--r-- 2 boincer umatlas    590104 Nov 26 02:42 input.tar.gz
[2025-11-26 19:52:33] -rw------- 1 boincer umatlas 913329581 Nov 26 19:51 HITS.pool.root.1
[2025-11-26 19:52:33] -rw------- 1 boincer umatlas  10618880 Nov 26 19:52 result.tar.gz
19:52:34 (41084): run_atlas exited; CPU time 475582.162863
19:52:34 (41084): called boinc_finish(0)

</stderr_txt>
]]>

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