Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
02:43:08 (487199): wrapper (7.7.26015): starting
02:43:08 (487199): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 02:43:08] Arguments: --nthreads 4
[2025-11-26 02:43:08] Threads: 4
[2025-11-26 02:43:08] Checking for CVMFS
[2025-11-26 02:43:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 02:43:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 02:43:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 02:43:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 02:43:08] 2.13.2.0 774864 4022 59420 153316 2 81 2937762 4096001 5100 130560 0 11791988 99.950 556905 1358 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 02:43:08] CVMFS is ok
[2025-11-26 02:43:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 02:43:08] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 02:43:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 02:43:08] Further information can be found at the LHC@home message board.
[2025-11-26 02:43:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 02:43:08] Checking for apptainer binary...
[2025-11-26 02:43:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 02:43:08] Running /usr/bin/apptainer --version
[2025-11-26 02:43:08] apptainer version 1.4.3
[2025-11-26 02:43:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 02:43:09] msi670e
[2025-11-26 02:43:09] apptainer works
[2025-11-26 02:43:09] Set ATHENA_PROC_NUMBER=4
[2025-11-26 02:43:09] Set ATHENA_CORE_NUMBER=4
[2025-11-26 02:43:09] Starting ATLAS job with PandaID=6894246178
[2025-11-26 02:43:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 09:19:59]  *** The last 200 lines of the pilot log: ***
[2025-11-26 09:19:59] 2025-11-26 16:19:07,870 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6894246178/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 09:19:59] 2025-11-26 16:19:07,871 | INFO     | extracted standard info from prmon json
[2025-11-26 09:19:59] 2025-11-26 16:19:07,871 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 09:19:59] 2025-11-26 16:19:07,871 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 09:19:59] 2025-11-26 16:19:07,874 | INFO     | fitting pss+swap vs Time
[2025-11-26 09:19:59] 2025-11-26 16:19:07,874 | INFO     | sum of square deviations: 18252584090.0
[2025-11-26 09:19:59] 2025-11-26 16:19:07,875 | INFO     | sum of deviations: 101129823804.0
[2025-11-26 09:19:59] 2025-11-26 16:19:07,875 | INFO     | mean x: 1764162047.0
[2025-11-26 09:19:59] 2025-11-26 16:19:07,875 | INFO     | mean y: 2259756.820051414
[2025-11-26 09:19:59] 2025-11-26 16:19:07,875 | INFO     | intersect: -9772213605.149485
[2025-11-26 09:19:59] 2025-11-26 16:19:07,876 | INFO     | chi2: 2.4090708180227667
[2025-11-26 09:19:59] 2025-11-26 16:19:07,876 | INFO     | sum of square deviations: 17557761760.0
[2025-11-26 09:19:59] 2025-11-26 16:19:07,877 | INFO     | sum of deviations: 135360469337.5
[2025-11-26 09:19:59] 2025-11-26 16:19:07,877 | INFO     | mean x: 1764161894.5
[2025-11-26 09:19:59] 2025-11-26 16:19:07,877 | INFO     | mean y: 2267209.7734375
[2025-11-26 09:19:59] 2025-11-26 16:19:07,877 | INFO     | intersect: -13598428897.79541
[2025-11-26 09:19:59] 2025-11-26 16:19:07,878 | INFO     | chi2: 1.5635418705189466
[2025-11-26 09:19:59] 2025-11-26 16:19:07,878 | INFO     | current chi2=1.5635418705189466 (change=35.09772071365606 %)
[2025-11-26 09:19:59] 2025-11-26 16:19:07,878 | INFO     | sum of square deviations: 16880800230.0
[2025-11-26 09:19:59] 2025-11-26 16:19:07,879 | INFO     | sum of deviations: 131792680567.00021
[2025-11-26 09:19:59] 2025-11-26 16:19:07,879 | INFO     | mean x: 1764161742.0
[2025-11-26 09:19:59] 2025-11-26 16:19:07,879 | INFO     | mean y: 2266406.124010554
[2025-11-26 09:19:59] 2025-11-26 16:19:07,879 | INFO     | intersect: -13770990889.980408
[2025-11-26 09:19:59] 2025-11-26 16:19:07,880 | INFO     | chi2: 1.5637397382538876
[2025-11-26 09:19:59] 2025-11-26 16:19:07,880 | INFO     | current chi2=1.5637397382538876 (change=-0.012655096654069263 %)
[2025-11-26 09:19:59] 2025-11-26 16:19:07,880 | INFO     | right removable region: 378
[2025-11-26 09:19:59] 2025-11-26 16:19:07,880 | INFO     | sum of square deviations: 17557761760.0
[2025-11-26 09:19:59] 2025-11-26 16:19:07,881 | INFO     | sum of deviations: 45337205527.500084
[2025-11-26 09:19:59] 2025-11-26 16:19:07,881 | INFO     | mean x: 1764162199.5
[2025-11-26 09:19:59] 2025-11-26 16:19:07,881 | INFO     | mean y: 2271927.9973958335
[2025-11-26 09:19:59] 2025-11-26 16:19:07,881 | INFO     | intersect: -4553102801.188934
[2025-11-26 09:19:59] 2025-11-26 16:19:07,882 | INFO     | chi2: 0.9104997287083989
[2025-11-26 09:19:59] 2025-11-26 16:19:07,882 | INFO     | current chi2=0.9104997287083989 (change=62.2053564429589 %)
[2025-11-26 09:19:59] 2025-11-26 16:19:07,882 | INFO     | sum of square deviations: 16880800230.0
[2025-11-26 09:19:59] 2025-11-26 16:19:07,883 | INFO     | sum of deviations: 44229791000.99999
[2025-11-26 09:19:59] 2025-11-26 16:19:07,883 | INFO     | mean x: 1764162352.0
[2025-11-26 09:19:59] 2025-11-26 16:19:07,883 | INFO     | mean y: 2272176.2981530344
[2025-11-26 09:19:59] 2025-11-26 16:19:07,883 | INFO     | intersect: -4620052065.305207
[2025-11-26 09:19:59] 2025-11-26 16:19:07,884 | INFO     | chi2: 0.9100266553269689
[2025-11-26 09:19:59] 2025-11-26 16:19:07,884 | INFO     | current chi2=0.9100266553269689 (change=0.05195755325496621 %)
[2025-11-26 09:19:59] 2025-11-26 16:19:07,884 | INFO     | left removable region: 20
[2025-11-26 09:19:59] 2025-11-26 16:19:07,884 | INFO     | sum of square deviations: 14227353269.5
[2025-11-26 09:19:59] 2025-11-26 16:19:07,885 | INFO     | sum of deviations: 77620164950.49998
[2025-11-26 09:19:59] 2025-11-26 16:19:07,885 | INFO     | mean x: 1764162321.5
[2025-11-26 09:19:59] 2025-11-26 16:19:07,885 | INFO     | mean y: 2278556.8072625697
[2025-11-26 09:19:59] 2025-11-26 16:19:07,885 | INFO     | intersect: -9622461041.65632
[2025-11-26 09:19:59] 2025-11-26 16:19:07,886 | INFO     | chi2: 0.04092332737990978
[2025-11-26 09:19:59] 2025-11-26 16:19:07,886 | INFO     | current memory leak: 5.46 B/s (using 358 data points, chi2=0.04)
[2025-11-26 09:19:59] 2025-11-26 16:19:07,886 | INFO     | could have reported an average CPU frequency of 4996 MHz (17 samples)
[2025-11-26 09:19:59] 2025-11-26 16:19:07,886 | INFO     | ..............................
[2025-11-26 09:19:59] 2025-11-26 16:19:07,886 | INFO     | . Timing measurements:
[2025-11-26 09:19:59] 2025-11-26 16:19:07,886 | INFO     | . get job = 0 s
[2025-11-26 09:19:59] 2025-11-26 16:19:07,886 | INFO     | . initial setup = 2 s
[2025-11-26 09:19:59] 2025-11-26 16:19:07,886 | INFO     | . payload setup = 2 s
[2025-11-26 09:19:59] 2025-11-26 16:19:07,886 | INFO     | . stage-in = 0 s
[2025-11-26 09:19:59] 2025-11-26 16:19:07,886 | INFO     | . payload execution = 23728 s
[2025-11-26 09:19:59] 2025-11-26 16:19:07,886 | INFO     | . stage-out = 2 s
[2025-11-26 09:19:59] 2025-11-26 16:19:07,886 | INFO     | . log creation = 0 s
[2025-11-26 09:19:59] 2025-11-26 16:19:07,886 | INFO     | ..............................
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | 
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | job summary report
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | --------------------------------------------------
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | PanDA job id: 6894246178
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | task id: 47533967
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | errors: (none)
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | pilot state: finished 
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | transexitcode: 0
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | exeerrorcode: 0
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | exeerrordiag: 
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | exitcode: 0
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | exitmsg: OK
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | cpuconsumptiontime: 94095 s
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | nevents: 1000
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | neventsw: 0
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | pid: 497711
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | pgrp: 497711
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | corecount: 4
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | event service: False
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | sizes: {0: 2284320, 2: 2284582, 11: 2284610, 23734: 2320791, 23737: 2329799, 23738: 2329855, 23740: 2330293}
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | --------------------------------------------------
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | 
[2025-11-26 09:19:59] 2025-11-26 16:19:08,172 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2025-11-26 09:19:59] 2025-11-26 16:19:08,185 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 09:19:59] 2025-11-26 16:19:08,185 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 09:19:59] 2025-11-26 16:19:08,185 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 09:19:59] 2025-11-26 16:19:08,185 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 09:19:59] 2025-11-26 16:19:08,185 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 09:19:59] 2025-11-26 16:19:08,185 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 09:19:59] 2025-11-26 16:19:08,185 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 09:19:59] 2025-11-26 16:19:08,185 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 09:19:59] 2025-11-26 16:19:08,185 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 09:19:59] 2025-11-26 16:19:08,185 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 09:19:59] 2025-11-26 16:19:08,185 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 09:19:59] 2025-11-26 16:19:08,185 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 09:19:59] 2025-11-26 16:19:08,185 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 09:19:59] 2025-11-26 16:19:08,185 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 09:19:59] 2025-11-26 16:19:08,185 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 09:19:59] 2025-11-26 16:19:08,185 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 09:19:59] 2025-11-26 16:19:08,185 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 09:19:59] 2025-11-26 16:19:08,185 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 09:19:59] 2025-11-26 16:19:08,185 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 09:19:59] 2025-11-26 16:19:08,185 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 09:19:59] 2025-11-26 16:19:08,186 | INFO     | job 6894246178 has completed (purged errors)
[2025-11-26 09:19:59] 2025-11-26 16:19:08,186 | INFO     | overall cleanup function is called
[2025-11-26 09:19:59] 2025-11-26 16:19:08,420 | INFO     | PID=491046 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 09:19:59] 2025-11-26 16:19:08,420 | INFO     | .. there are 7 such processes running
[2025-11-26 09:19:59] 2025-11-26 16:19:09,195 | INFO     | --- collectZombieJob: --- 10, [497711]
[2025-11-26 09:19:59] 2025-11-26 16:19:09,195 | INFO     | zombie collector waiting for pid 497711
[2025-11-26 09:19:59] 2025-11-26 16:19:09,195 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 09:19:59] 2025-11-26 16:19:09,195 | INFO     | collected zombie processes
[2025-11-26 09:19:59] 2025-11-26 16:19:09,195 | INFO     | will attempt to kill all subprocesses of pid=497711
[2025-11-26 09:19:59] 2025-11-26 16:19:09,274 | INFO     | process IDs to be killed: [497711] (in reverse order)
[2025-11-26 09:19:59] 2025-11-26 16:19:09,311 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 09:19:59] 2025-11-26 16:19:09,311 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 09:19:59] 2025-11-26 16:19:09,314 | INFO     | did not find any defunct processes belonging to 497711
[2025-11-26 09:19:59] 2025-11-26 16:19:09,316 | INFO     | did not find any defunct processes belonging to 497711
[2025-11-26 09:19:59] 2025-11-26 16:19:09,317 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 09:19:59] 2025-11-26 16:19:09,317 | INFO     | ready for new job
[2025-11-26 09:19:59] 2025-11-26 16:19:09,317 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 09:19:59] 2025-11-26 16:19:09,318 | INFO     | ***************************************
[2025-11-26 09:19:59] 2025-11-26 16:19:09,319 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 09:19:59] 2025-11-26 16:19:09,319 | INFO     | ***************************************
[2025-11-26 09:19:59] 2025-11-26 16:19:09,319 | INFO     | 
[2025-11-26 09:19:59] 2025-11-26 16:19:09,320 | INFO     | architecture information:
[2025-11-26 09:19:59] 2025-11-26 16:19:09,320 | INFO     | executing command: cat /etc/os-release
[2025-11-26 09:19:59] 2025-11-26 16:19:09,329 | INFO     | cat /etc/os-release:
[2025-11-26 09:19:59] NAME="CentOS Linux"
[2025-11-26 09:19:59] VERSION="7 (Core)"
[2025-11-26 09:19:59] ID="centos"
[2025-11-26 09:19:59] ID_LIKE="rhel fedora"
[2025-11-26 09:19:59] VERSION_ID="7"
[2025-11-26 09:19:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 09:19:59] ANSI_COLOR="0;31"
[2025-11-26 09:19:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 09:19:59] HOME_URL="https://www.centos.org/"
[2025-11-26 09:19:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 09:19:59] 
[2025-11-26 09:19:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 09:19:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 09:19:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 09:19:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 09:19:59] 
[2025-11-26 09:19:59] 2025-11-26 16:19:09,329 | INFO     | ***************************************
[2025-11-26 09:19:59] 2025-11-26 16:19:09,831 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2025-11-26 09:19:59] 2025-11-26 16:19:09,841 | INFO     | sufficient remaining disk space (437445984256 B)
[2025-11-26 09:19:59] 2025-11-26 16:19:09,841 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 09:19:59] 2025-11-26 16:19:09,841 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 09:19:59] 2025-11-26 16:19:09,841 | INFO     | update_server=False
[2025-11-26 09:19:59] 2025-11-26 16:19:09,841 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 09:19:59] 2025-11-26 16:19:09,841 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:19:59] 2025-11-26 16:19:09,917 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 09:19:59] 2025-11-26 16:19:09,917 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 09:19:59] 2025-11-26 16:19:09,917 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:19:59] 2025-11-26 16:19:09,917 | INFO     | will abort loop
[2025-11-26 09:19:59] 2025-11-26 16:19:09,926 | INFO     | all payload control threads have been joined
[2025-11-26 09:19:59] 2025-11-26 16:19:10,181 | INFO     | all job control threads have been joined
[2025-11-26 09:19:59] 2025-11-26 16:19:10,491 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 09:19:59] 2025-11-26 16:19:10,572 | INFO     | all data control threads have been joined
[2025-11-26 09:19:59] 2025-11-26 16:19:10,846 | INFO     | [job] retrieve thread has finished
[2025-11-26 09:19:59] 2025-11-26 16:19:10,846 | INFO     | [job] queue monitor thread has finished
[2025-11-26 09:19:59] 2025-11-26 16:19:10,876 | INFO     | [job] validate thread has finished
[2025-11-26 09:19:59] 2025-11-26 16:19:10,912 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 09:19:59] 2025-11-26 16:19:10,922 | INFO     | [job] job monitor thread has finished
[2025-11-26 09:19:59] 2025-11-26 16:19:10,931 | INFO     | [payload] control thread has finished
[2025-11-26 09:19:59] 2025-11-26 16:19:11,053 | INFO     | [payload] validate_post thread has finished
[2025-11-26 09:19:59] 2025-11-26 16:19:11,183 | INFO     | [job] control thread has finished
[2025-11-26 09:19:59] 2025-11-26 16:19:11,286 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 09:19:59] 2025-11-26 16:19:11,390 | INFO     | [payload] failed_post thread has finished
[2025-11-26 09:19:59] 2025-11-26 16:19:11,488 | INFO     | [data] copytool_in thread has finished
[2025-11-26 09:19:59] 2025-11-26 16:19:11,577 | INFO     | [data] control thread has finished
[2025-11-26 09:19:59] 2025-11-26 16:19:12,016 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 09:19:59] 2025-11-26 16:19:12,240 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 09:19:59] 2025-11-26 16:19:12,497 | INFO     | [data] copytool_out thread has finished
[2025-11-26 09:19:59] 2025-11-26 16:19:15,291 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 09:19:59] 2025-11-26 16:19:20,045 | INFO     | job.realtimelogging is not enabled
[2025-11-26 09:19:59] 2025-11-26 16:19:21,050 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 09:19:59] 2025-11-26 16:19:40,582 | INFO     | PID=491046 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 09:19:59] 2025-11-26 16:19:40,582 | INFO     | .. there are 7 such processes running
[2025-11-26 09:19:59] 2025-11-26 16:19:40,582 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 09:19:59] 2025-11-26 16:19:40,582 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 09:19:59] 2025-11-26 16:19:40,582 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 09:19:59] 2025-11-26 16:19:54,183 | INFO     | [monitor] cgroup control has ended
[2025-11-26 09:19:59] 2025-11-26 16:19:54,519 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132448974124864)>', '<ExcThread(monitor, started 132448620877568)>']
[2025-11-26 09:19:59] 2025-11-26 16:19:54,652 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 09:19:59] 2025-11-26 16:19:54,652 | INFO     | [monitor] control thread has ended
[2025-11-26 09:19:59] 2025-11-26 16:19:59,527 | INFO     | all workflow threads have been joined
[2025-11-26 09:19:59] 2025-11-26 16:19:59,527 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 09:19:59] 2025-11-26 16:19:59,528 | INFO     | traces error code: 0
[2025-11-26 09:19:59] 2025-11-26 16:19:59,528 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 09:19:59] 2025-11-26 16:19:59,581 [wrapper] ==== pilot stdout END ====
[2025-11-26 09:19:59] 2025-11-26 16:19:59,583 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 09:19:59] 2025-11-26 16:19:59,584 [wrapper] pilotpid: 491046
[2025-11-26 09:19:59] 2025-11-26 16:19:59,586 [wrapper] Pilot exit status: 0
[2025-11-26 09:19:59] 2025-11-26 16:19:59,591 [wrapper] pandaids: 6894246178
[2025-11-26 09:19:59] 2025-11-26 16:19:59,615 [wrapper] cleanup supervisor_pilot  848355 491047
[2025-11-26 09:19:59] 2025-11-26 16:19:59,617 [wrapper] Test setup, not cleaning
[2025-11-26 09:19:59] 2025-11-26 16:19:59,618 [wrapper] apfmon messages muted
[2025-11-26 09:19:59] 2025-11-26 16:19:59,619 [wrapper] ==== wrapper stdout END ====
[2025-11-26 09:19:59] 2025-11-26 16:19:59,621 [wrapper] ==== wrapper stderr END ====
[2025-11-26 09:19:59]  *** Error codes and diagnostics ***
[2025-11-26 09:19:59]     "exeErrorCode": 0,
[2025-11-26 09:19:59]     "exeErrorDiag": "",
[2025-11-26 09:19:59]     "pilotErrorCode": 0,
[2025-11-26 09:19:59]     "pilotErrorDiag": "",
[2025-11-26 09:19:59]  *** Listing of results directory ***
[2025-11-26 09:19:59] total 1318032
[2025-11-26 09:19:59] -rw-r--r-- 1 boinc boinc    576529 Nov 20 18:08 pilot3.tar.gz
[2025-11-26 09:19:59] -rwx------ 1 boinc boinc     36292 Nov 20 18:24 runpilot2-wrapper.sh
[2025-11-26 09:19:59] -rw-r--r-- 1 boinc boinc      5112 Nov 20 18:24 queuedata.json
[2025-11-26 09:19:59] -rw-r--r-- 1 boinc boinc       100 Nov 26 02:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 09:19:59] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 02:43 run_atlas
[2025-11-26 09:19:59] -rw-r--r-- 1 boinc boinc       105 Nov 26 02:43 job.xml
[2025-11-26 09:19:59] -rw-r--r-- 1 boinc boinc      9948 Nov 26 02:43 init_data.xml
[2025-11-26 09:19:59] -rw-r--r-- 2 boinc boinc 412161567 Nov 26 02:43 EVNT.47493127._002088.pool.root.1
[2025-11-26 09:19:59] -rw-r--r-- 2 boinc boinc     15847 Nov 26 02:43 start_atlas.sh
[2025-11-26 09:19:59] drwxrwx--x 2 boinc boinc      4096 Nov 26 02:43 shared
[2025-11-26 09:19:59] -rw-r--r-- 2 boinc boinc    590100 Nov 26 02:43 input.tar.gz
[2025-11-26 09:19:59] -rw-r--r-- 1 boinc boinc         0 Nov 26 02:43 boinc_lockfile
[2025-11-26 09:19:59] -rw-r--r-- 1 boinc boinc      2785 Nov 26 02:43 pandaJob.out
[2025-11-26 09:19:59] -rw------- 1 boinc boinc    991827 Nov 26 02:43 agis_schedconf.cvmfs.json
[2025-11-26 09:19:59] drwx------ 5 boinc boinc      4096 Nov 26 02:43 pilot3
[2025-11-26 09:19:59] -rw-r--r-- 1 boinc boinc       531 Nov 26 09:15 boinc_task_state.xml
[2025-11-26 09:19:59] -rw------- 1 boinc boinc 924220589 Nov 26 09:18 HITS.47533967._000594.pool.root.1
[2025-11-26 09:19:59] -rw------- 1 boinc boinc      1031 Nov 26 09:18 memory_monitor_summary.json
[2025-11-26 09:19:59] -rw------- 1 boinc boinc        95 Nov 26 09:19 pilot_heartbeat.json
[2025-11-26 09:19:59] -rw------- 1 boinc boinc   1516240 Nov 26 09:19 agis_ddmendpoints.agis.ALL.json
[2025-11-26 09:19:59] -rw------- 1 boinc boinc   1233399 Nov 26 09:19 log.47533967._000594.job.log.tgz.1
[2025-11-26 09:19:59] -rw------- 1 boinc boinc      8554 Nov 26 09:19 heartbeat.json
[2025-11-26 09:19:59] -rw-r--r-- 1 boinc boinc        28 Nov 26 09:19 wrapper_checkpoint.txt
[2025-11-26 09:19:59] -rw-r--r-- 1 boinc boinc      8192 Nov 26 09:19 boinc_mmap_file
[2025-11-26 09:19:59] -rw------- 1 boinc boinc      5088 Nov 26 09:19 pilotlog.txt
[2025-11-26 09:19:59] -rw------- 1 boinc boinc   3442366 Nov 26 09:19 log.47533967._000594.job.log.1
[2025-11-26 09:19:59] -rw------- 1 boinc boinc       353 Nov 26 09:19 output.list
[2025-11-26 09:19:59] -rw-r--r-- 1 boinc boinc       620 Nov 26 09:19 runtime_log
[2025-11-26 09:19:59] -rw------- 1 boinc boinc   4700160 Nov 26 09:19 result.tar.gz
[2025-11-26 09:19:59] -rw------- 1 boinc boinc       660 Nov 26 09:19 WaILDmZ4Ug8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRoIKDmcf6zRm.diag
[2025-11-26 09:19:59] -rw-r--r-- 1 boinc boinc      8920 Nov 26 09:19 runtime_log.err
[2025-11-26 09:19:59] -rw-r--r-- 1 boinc boinc     21359 Nov 26 09:19 stderr.txt
[2025-11-26 09:19:59] HITS file was successfully produced:
[2025-11-26 09:19:59] -rw------- 1 boinc boinc 924220589 Nov 26 09:18 shared/HITS.pool.root.1
[2025-11-26 09:19:59]  *** Contents of shared directory: ***
[2025-11-26 09:19:59] total 1310260
[2025-11-26 09:19:59] -rw-r--r-- 2 boinc boinc 412161567 Nov 26 02:43 ATLAS.root_0
[2025-11-26 09:19:59] -rw-r--r-- 2 boinc boinc     15847 Nov 26 02:43 start_atlas.sh
[2025-11-26 09:19:59] -rw-r--r-- 2 boinc boinc    590100 Nov 26 02:43 input.tar.gz
[2025-11-26 09:19:59] -rw------- 1 boinc boinc 924220589 Nov 26 09:18 HITS.pool.root.1
[2025-11-26 09:19:59] -rw------- 1 boinc boinc   4700160 Nov 26 09:19 result.tar.gz
09:20:01 (487199): run_atlas exited; CPU time 94062.249511
09:20:01 (487199): called boinc_finish(0)

</stderr_txt>
]]>

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