Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:28:29 (3274015): wrapper (7.7.26015): starting
12:28:29 (3274015): wrapper: running run_atlas (--nthreads 2)
[2025-11-28 12:28:29] Arguments: --nthreads 2
[2025-11-28 12:28:29] Threads: 2
[2025-11-28 12:28:29] Checking for CVMFS
[2025-11-28 12:28:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 12:28:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 12:28:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 12:28:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 12:28:29] 2.9.2.0 1656350 13914 62848 153408 0 81 32322424 36864000 0 130560 0 4478524 99.872 776442 3023 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-28 12:28:29] CVMFS is ok
[2025-11-28 12:28:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 12:28:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 12:28:29] Further information can be found at the LHC@home message board.
[2025-11-28 12:28:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 12:28:29] Checking for apptainer binary...
[2025-11-28 12:28:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 12:28:29] Running /usr/bin/apptainer --version
[2025-11-28 12:28:29] apptainer version 1.4.1-1.1
[2025-11-28 12:28:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 12:28:29] thA314b
[2025-11-28 12:28:29] apptainer works
[2025-11-28 12:28:29] Set ATHENA_PROC_NUMBER=2
[2025-11-28 12:28:29] Set ATHENA_CORE_NUMBER=2
[2025-11-28 12:28:29] Starting ATLAS job with PandaID=6896219326
[2025-11-28 12:28:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 00:43:52]  *** The last 200 lines of the pilot log: ***
[2025-11-29 00:43:52] 2025-11-28 23:42:46,508 | INFO     | aborting loop
[2025-11-29 00:43:52] 2025-11-28 23:42:46,508 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 00:43:52] 2025-11-28 23:42:46,508 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 00:43:52] 2025-11-28 23:42:46,741 | INFO     | all payload control threads have been joined
[2025-11-29 00:43:52] 2025-11-28 23:42:47,185 | INFO     | all job control threads have been joined
[2025-11-29 00:43:52] 2025-11-28 23:42:47,436 | INFO     | all data control threads have been joined
[2025-11-29 00:43:52] 2025-11-28 23:42:47,514 | INFO     | [job] job monitor thread has finished
[2025-11-29 00:43:52] 2025-11-28 23:42:47,514 | INFO     | [job] retrieve thread has finished
[2025-11-29 00:43:52] 2025-11-28 23:42:47,515 | INFO     | [job] queue monitor thread has finished
[2025-11-29 00:43:52] 2025-11-28 23:42:47,654 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 00:43:52] 2025-11-28 23:42:47,747 | INFO     | [payload] control thread has finished
[2025-11-29 00:43:52] 2025-11-28 23:42:48,191 | INFO     | [job] control thread has finished
[2025-11-29 00:43:52] 2025-11-28 23:42:48,401 | INFO     | [payload] failed_post thread has finished
[2025-11-29 00:43:52] 2025-11-28 23:42:48,442 | INFO     | [data] control thread has finished
[2025-11-29 00:43:52] 2025-11-28 23:42:48,467 | INFO     | [data] copytool_in thread has finished
[2025-11-29 00:43:52] 2025-11-28 23:42:48,514 | INFO     | [data] copytool_out thread has finished
[2025-11-29 00:43:52] 2025-11-28 23:42:48,704 | INFO     | [payload] validate_post thread has finished
[2025-11-29 00:43:52] 2025-11-28 23:42:48,816 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 00:43:52] 2025-11-28 23:42:48,881 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 00:43:52] 2025-11-28 23:42:48,963 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 00:43:52] 2025-11-28 23:42:49,007 | INFO     | [job] validate thread has finished
[2025-11-29 00:43:52] 2025-11-28 23:42:52,823 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 00:43:52] 2025-11-28 23:42:56,574 | INFO     | job.realtimelogging is not enabled
[2025-11-29 00:43:52] 2025-11-28 23:42:57,580 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 00:43:52] 2025-11-28 23:43:16,465 | INFO     | PID=3277729 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-29 00:43:52] 2025-11-28 23:43:16,465 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 00:43:52] 2025-11-28 23:43:16,465 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 00:43:52] 2025-11-28 23:43:16,465 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 00:43:52] 2025-11-28 23:43:43,124 [wrapper] supervise_pilot (15 min periods counter: 50)
[2025-11-29 00:43:52] 2025-11-28 23:43:45,973 | INFO     | [monitor] cgroup control has ended
[2025-11-29 00:43:52] 2025-11-28 23:43:47,400 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139670473934656)>', '<ExcThread(monitor, started 139669668861696)>']
[2025-11-29 00:43:52] 2025-11-28 23:43:47,627 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 00:43:52] 2025-11-28 23:43:47,628 | INFO     | [monitor] control thread has ended
[2025-11-29 00:43:52] 2025-11-28 23:43:52,425 | INFO     | all workflow threads have been joined
[2025-11-29 00:43:52] 2025-11-28 23:43:52,426 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 00:43:52] 2025-11-28 23:43:52,426 | INFO     | traces error code: 0
[2025-11-29 00:43:52] 2025-11-28 23:43:52,427 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 00:43:52] 2025-11-28 23:43:52,468 [wrapper] ==== pilot stdout END ====
[2025-11-29 00:43:52] 2025-11-28 23:43:52,470 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 00:43:52] 2025-11-28 23:43:52,473 [wrapper] pilotpid: 3277729
[2025-11-29 00:43:52] 2025-11-28 23:43:52,475 [wrapper] Pilot exit status: 0
[2025-11-29 00:43:52] 2025-11-28 23:43:52,480 [wrapper] pandaids: 6896219326
[2025-11-29 00:43:52] 2025-11-28 23:43:52,493 [wrapper] cleanup supervisor_pilot 3358541 3277730
[2025-11-29 00:43:52] 2025-11-28 23:43:52,495 [wrapper] Test setup, not cleaning
[2025-11-29 00:43:52] 2025-11-28 23:43:52,497 [wrapper] apfmon messages muted
[2025-11-29 00:43:52] 2025-11-28 23:43:52,499 [wrapper] ==== wrapper stdout END ====
[2025-11-29 00:43:52] 2025-11-28 23:43:52,501 [wrapper] ==== wrapper stderr END ====
[2025-11-29 00:43:52]  *** Error codes and diagnostics ***
[2025-11-29 00:43:52]     "exeErrorCode": 0,
[2025-11-29 00:43:52]     "exeErrorDiag": "",
[2025-11-29 00:43:52]     "pilotErrorCode": 0,
[2025-11-29 00:43:52]     "pilotErrorDiag": "",
[2025-11-29 00:43:52]  *** Listing of results directory ***
[2025-11-29 00:43:52] total 1321872
[2025-11-29 00:43:52] -rw-r--r-- 1 boinc boinc      5112 Nov 24 21:00 queuedata.json
[2025-11-29 00:43:52] -rwx------ 1 boinc boinc     36292 Nov 24 21:01 runpilot2-wrapper.sh
[2025-11-29 00:43:52] -rw-r--r-- 1 boinc boinc    576529 Nov 24 21:01 pilot3.tar.gz
[2025-11-29 00:43:52] -rw-r--r-- 1 boinc boinc       100 Nov 28 12:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 00:43:52] -rwxr-xr-x 1 boinc boinc      7986 Nov 28 12:28 run_atlas
[2025-11-29 00:43:52] -rw-r--r-- 1 boinc boinc       105 Nov 28 12:28 job.xml
[2025-11-29 00:43:52] -rw-r--r-- 2 boinc boinc 408296200 Nov 28 12:28 EVNT.47483658._002061.pool.root.1
[2025-11-29 00:43:52] -rw-r--r-- 2 boinc boinc    590097 Nov 28 12:28 input.tar.gz
[2025-11-29 00:43:52] -rw-r--r-- 2 boinc boinc     15847 Nov 28 12:28 start_atlas.sh
[2025-11-29 00:43:52] drwxrwx--x 2 boinc boinc      4096 Nov 28 12:28 shared
[2025-11-29 00:43:52] -rw-r--r-- 1 boinc boinc         0 Nov 28 12:28 boinc_setup_complete
[2025-11-29 00:43:52] -rw-r--r-- 1 boinc boinc      6208 Nov 28 12:28 init_data.xml
[2025-11-29 00:43:52] -rw-r--r-- 1 boinc boinc         0 Nov 28 12:28 boinc_lockfile
[2025-11-29 00:43:52] -rw-r--r-- 1 boinc boinc      2784 Nov 28 12:28 pandaJob.out
[2025-11-29 00:43:52] -rw------- 1 boinc boinc    991856 Nov 28 12:28 agis_schedconf.cvmfs.json
[2025-11-29 00:43:52] drwx------ 5 boinc boinc      4096 Nov 28 12:28 pilot3
[2025-11-29 00:43:52] -rw-r--r-- 1 boinc boinc       531 Nov 29 00:39 boinc_task_state.xml
[2025-11-29 00:43:52] -rw------- 1 boinc boinc 926593580 Nov 29 00:42 HITS.47556161._000443.pool.root.1
[2025-11-29 00:43:52] -rw------- 1 boinc boinc      1022 Nov 29 00:42 memory_monitor_summary.json
[2025-11-29 00:43:52] -rw------- 1 boinc boinc   1516240 Nov 29 00:42 agis_ddmendpoints.agis.ALL.json
[2025-11-29 00:43:52] -rw------- 1 boinc boinc   1218693 Nov 29 00:42 log.47556161._000443.job.log.tgz.1
[2025-11-29 00:43:52] -rw------- 1 boinc boinc      8557 Nov 29 00:42 heartbeat.json
[2025-11-29 00:43:52] -rw------- 1 boinc boinc        95 Nov 29 00:43 pilot_heartbeat.json
[2025-11-29 00:43:52] -rw-r--r-- 1 boinc boinc      8192 Nov 29 00:43 boinc_mmap_file
[2025-11-29 00:43:52] -rw-r--r-- 1 boinc boinc        28 Nov 29 00:43 wrapper_checkpoint.txt
[2025-11-29 00:43:52] -rw------- 1 boinc boinc      4824 Nov 29 00:43 pilotlog.txt
[2025-11-29 00:43:52] -rw------- 1 boinc boinc   6180594 Nov 29 00:43 log.47556161._000443.job.log.1
[2025-11-29 00:43:52] -rw------- 1 boinc boinc       353 Nov 29 00:43 output.list
[2025-11-29 00:43:52] -rw-r--r-- 1 boinc boinc       620 Nov 29 00:43 runtime_log
[2025-11-29 00:43:52] -rw------- 1 boinc boinc   7424000 Nov 29 00:43 result.tar.gz
[2025-11-29 00:43:52] -rw-r--r-- 1 boinc boinc      8903 Nov 29 00:43 runtime_log.err
[2025-11-29 00:43:52] -rw------- 1 boinc boinc       666 Nov 29 00:43 4m5MDmsvrh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqBJKDmn38pZn.diag
[2025-11-29 00:43:52] -rw-r--r-- 1 boinc boinc      7265 Nov 29 00:43 stderr.txt
[2025-11-29 00:43:52] HITS file was successfully produced:
[2025-11-29 00:43:52] -rw------- 1 boinc boinc 926593580 Nov 29 00:42 shared/HITS.pool.root.1
[2025-11-29 00:43:52]  *** Contents of shared directory: ***
[2025-11-29 00:43:52] total 1311464
[2025-11-29 00:43:52] -rw-r--r-- 2 boinc boinc 408296200 Nov 28 12:28 ATLAS.root_0
[2025-11-29 00:43:52] -rw-r--r-- 2 boinc boinc    590097 Nov 28 12:28 input.tar.gz
[2025-11-29 00:43:52] -rw-r--r-- 2 boinc boinc     15847 Nov 28 12:28 start_atlas.sh
[2025-11-29 00:43:52] -rw------- 1 boinc boinc 926593580 Nov 29 00:42 HITS.pool.root.1
[2025-11-29 00:43:52] -rw------- 1 boinc boinc   7424000 Nov 29 00:43 result.tar.gz
00:43:54 (3274015): run_atlas exited; CPU time 87333.692511
00:43:54 (3274015): called boinc_finish(0)

</stderr_txt>
]]>

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