Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:25:26 (1855065): wrapper (7.7.26015): starting
20:25:26 (1855065): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 20:25:26] Arguments: --nthreads 12
[2025-11-26 20:25:26] Threads: 12
[2025-11-26 20:25:26] Checking for CVMFS
[2025-11-26 20:25:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 20:25:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 20:25:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 20:25:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 20:25:26] 2.9.2.0 369954 9167 71940 153333 3 81 3928577 36864000 0 130560 1 4588615 99.984 312414 478 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 20:25:26] CVMFS is ok
[2025-11-26 20:25:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 20:25:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 20:25:26] Further information can be found at the LHC@home message board.
[2025-11-26 20:25:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 20:25:26] Checking for apptainer binary...
[2025-11-26 20:25:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 20:25:26] Running /usr/bin/apptainer --version
[2025-11-26 20:25:26] apptainer version 1.4.2-2.1
[2025-11-26 20:25:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 20:25:26] cosA131a
[2025-11-26 20:25:26] apptainer works
[2025-11-26 20:25:26] Set ATHENA_PROC_NUMBER=12
[2025-11-26 20:25:26] Set ATHENA_CORE_NUMBER=12
[2025-11-26 20:25:26] Starting ATLAS job with PandaID=6896764162
[2025-11-26 20:25:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 01:03:31]  *** The last 200 lines of the pilot log: ***
[2025-11-27 01:03:31] 2025-11-27 00:02:57,048 | INFO     | maximum number of monitored processes: 20
[2025-11-27 01:03:31] 2025-11-27 00:02:58,658 | INFO     | time since job start (16640s) is within the limit (172800.0s)
[2025-11-27 01:03:31] 2025-11-27 00:02:59,551 | INFO     | monitor loop #1225: job 0:6896764162 is in state 'finished'
[2025-11-27 01:03:31] 2025-11-27 00:02:59,551 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:03:31] 2025-11-27 00:02:59,679 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 01:03:31] 2025-11-27 00:02:59,680 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4007.6210833333334
[2025-11-27 01:03:31] 2025-11-27 00:02:59,681 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6896764162/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 01:03:31] 2025-11-27 00:02:59,681 | INFO     | extracted standard info from prmon json
[2025-11-27 01:03:31] 2025-11-27 00:02:59,681 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 01:03:31] 2025-11-27 00:02:59,681 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 01:03:31] 2025-11-27 00:02:59,683 | INFO     | fitting pss+swap vs Time
[2025-11-27 01:03:31] 2025-11-27 00:02:59,683 | INFO     | sum of square deviations: 6308936013.428555
[2025-11-27 01:03:31] 2025-11-27 00:02:59,684 | INFO     | sum of deviations: 330055325469.2859
[2025-11-27 01:03:31] 2025-11-27 00:02:59,684 | INFO     | mean x: 1764193457.142857
[2025-11-27 01:03:31] 2025-11-27 00:02:59,684 | INFO     | mean y: 3591215.3516483516
[2025-11-27 01:03:31] 2025-11-27 00:02:59,684 | INFO     | intersect: -92291122893.12651
[2025-11-27 01:03:31] 2025-11-27 00:02:59,684 | INFO     | chi2: 6.312226653867946
[2025-11-27 01:03:31] 2025-11-27 00:02:59,685 | INFO     | sum of square deviations: 5968606643.324597
[2025-11-27 01:03:31] 2025-11-27 00:02:59,685 | INFO     | sum of deviations: 421717555351.58997
[2025-11-27 01:03:31] 2025-11-27 00:02:59,685 | INFO     | mean x: 1764193304.6455224
[2025-11-27 01:03:31] 2025-11-27 00:02:59,686 | INFO     | mean y: 3632100.574626866
[2025-11-27 01:03:31] 2025-11-27 00:02:59,686 | INFO     | intersect: -124647116736.23244
[2025-11-27 01:03:31] 2025-11-27 00:02:59,686 | INFO     | chi2: 3.7772508427307194
[2025-11-27 01:03:31] 2025-11-27 00:02:59,686 | INFO     | current chi2=3.7772508427307194 (change=40.1597716644707 %)
[2025-11-27 01:03:31] 2025-11-27 00:02:59,686 | INFO     | sum of square deviations: 5640742623.216766
[2025-11-27 01:03:31] 2025-11-27 00:02:59,687 | INFO     | sum of deviations: 407835261142.0226
[2025-11-27 01:03:31] 2025-11-27 00:02:59,687 | INFO     | mean x: 1764193152.148289
[2025-11-27 01:03:31] 2025-11-27 00:02:59,687 | INFO     | mean y: 3625632.3840304185
[2025-11-27 01:03:31] 2025-11-27 00:02:59,687 | INFO     | intersect: -127550532210.23236
[2025-11-27 01:03:31] 2025-11-27 00:02:59,687 | INFO     | chi2: 3.7693098748615146
[2025-11-27 01:03:31] 2025-11-27 00:02:59,687 | INFO     | current chi2=3.7693098748615146 (change=0.21023141432312212 %)
[2025-11-27 01:03:31] 2025-11-27 00:02:59,687 | INFO     | right removable region: 262
[2025-11-27 01:03:31] 2025-11-27 00:02:59,687 | INFO     | sum of square deviations: 5968582853.324597
[2025-11-27 01:03:31] 2025-11-27 00:02:59,688 | INFO     | sum of deviations: 215245501500.0633
[2025-11-27 01:03:31] 2025-11-27 00:02:59,688 | INFO     | mean x: 1764193609.6455224
[2025-11-27 01:03:31] 2025-11-27 00:02:59,688 | INFO     | mean y: 3642595.01119403
[2025-11-27 01:03:31] 2025-11-27 00:02:59,688 | INFO     | intersect: -63618618766.38366
[2025-11-27 01:03:31] 2025-11-27 00:02:59,688 | INFO     | chi2: 3.421248561473549
[2025-11-27 01:03:31] 2025-11-27 00:02:59,688 | INFO     | current chi2=3.421248561473549 (change=45.79965598388156 %)
[2025-11-27 01:03:31] 2025-11-27 00:02:59,688 | INFO     | sum of square deviations: 5640695043.216766
[2025-11-27 01:03:31] 2025-11-27 00:02:59,689 | INFO     | sum of deviations: 158348055987.3232
[2025-11-27 01:03:31] 2025-11-27 00:02:59,689 | INFO     | mean x: 1764193762.148289
[2025-11-27 01:03:31] 2025-11-27 00:02:59,689 | INFO     | mean y: 3668920.2737642587
[2025-11-27 01:03:31] 2025-11-27 00:02:59,689 | INFO     | intersect: -49521549245.3643
[2025-11-27 01:03:31] 2025-11-27 00:02:59,689 | INFO     | chi2: 2.659529348988807
[2025-11-27 01:03:31] 2025-11-27 00:02:59,689 | INFO     | current chi2=2.659529348988807 (change=22.26436339827543 %)
[2025-11-27 01:03:31] 2025-11-27 00:02:59,689 | INFO     | left removable region: 20
[2025-11-27 01:03:31] 2025-11-27 00:02:59,689 | INFO     | sum of square deviations: 4394537661.144608
[2025-11-27 01:03:31] 2025-11-27 00:02:59,690 | INFO     | sum of deviations: 199018326563.63232
[2025-11-27 01:03:31] 2025-11-27 00:02:59,690 | INFO     | mean x: 1764193731.6487603
[2025-11-27 01:03:31] 2025-11-27 00:02:59,690 | INFO     | mean y: 3727114.6074380167
[2025-11-27 01:03:31] 2025-11-27 00:02:59,690 | INFO     | intersect: -79892478420.54694
[2025-11-27 01:03:31] 2025-11-27 00:02:59,690 | INFO     | chi2: 0.024231916546968994
[2025-11-27 01:03:31] 2025-11-27 00:02:59,690 | INFO     | current memory leak: 45.29 B/s (using 242 data points, chi2=0.02)
[2025-11-27 01:03:31] 2025-11-27 00:02:59,690 | INFO     | could have reported an average CPU frequency of 3923 MHz (13 samples)
[2025-11-27 01:03:31] 2025-11-27 00:02:59,690 | INFO     | ..............................
[2025-11-27 01:03:31] 2025-11-27 00:02:59,690 | INFO     | . Timing measurements:
[2025-11-27 01:03:31] 2025-11-27 00:02:59,691 | INFO     | . get job = 0 s
[2025-11-27 01:03:31] 2025-11-27 00:02:59,691 | INFO     | . initial setup = 1 s
[2025-11-27 01:03:31] 2025-11-27 00:02:59,691 | INFO     | . payload setup = 5 s
[2025-11-27 01:03:31] 2025-11-27 00:02:59,691 | INFO     | . stage-in = 0 s
[2025-11-27 01:03:31] 2025-11-27 00:02:59,691 | INFO     | . payload execution = 16609 s
[2025-11-27 01:03:31] 2025-11-27 00:02:59,691 | INFO     | . stage-out = 1 s
[2025-11-27 01:03:31] 2025-11-27 00:02:59,691 | INFO     | . log creation = 0 s
[2025-11-27 01:03:31] 2025-11-27 00:02:59,691 | INFO     | ..............................
[2025-11-27 01:03:31] 2025-11-27 00:02:59,721 | INFO     | 
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | job summary report
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | --------------------------------------------------
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | PanDA job id: 6896764162
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | task id: 47556185
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | errors: (none)
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | pilot state: finished 
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | transexitcode: 0
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | exeerrorcode: 0
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | exeerrordiag: 
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | exitcode: 0
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | exitmsg: OK
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | cpuconsumptiontime: 190981 s
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | nevents: 1000
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | neventsw: 0
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | pid: 1865252
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | pgrp: 1865252
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | corecount: 12
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | event service: False
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | sizes: {0: 2284315, 4: 2284577, 11: 2284605, 16619: 2317517, 16620: 2326573, 16627: 2326763}
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | --------------------------------------------------
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | 
[2025-11-27 01:03:31] 2025-11-27 00:02:59,722 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-27 01:03:31] 2025-11-27 00:02:59,734 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 01:03:31] 2025-11-27 00:02:59,734 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 01:03:31] 2025-11-27 00:02:59,734 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 01:03:31] 2025-11-27 00:02:59,734 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 01:03:31] 2025-11-27 00:02:59,734 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 01:03:31] 2025-11-27 00:02:59,734 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 01:03:31] 2025-11-27 00:02:59,735 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 01:03:31] 2025-11-27 00:02:59,735 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 01:03:31] 2025-11-27 00:02:59,735 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 01:03:31] 2025-11-27 00:02:59,735 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 01:03:31] 2025-11-27 00:02:59,735 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 01:03:31] 2025-11-27 00:02:59,735 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 01:03:31] 2025-11-27 00:02:59,735 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 01:03:31] 2025-11-27 00:02:59,735 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 01:03:31] 2025-11-27 00:02:59,735 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 01:03:31] 2025-11-27 00:02:59,735 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 01:03:31] 2025-11-27 00:02:59,735 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 01:03:31] 2025-11-27 00:02:59,735 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 01:03:31] 2025-11-27 00:02:59,735 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 01:03:31] 2025-11-27 00:02:59,735 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 01:03:31] 2025-11-27 00:02:59,735 | INFO     | job 6896764162 has completed (purged errors)
[2025-11-27 01:03:31] 2025-11-27 00:02:59,735 | INFO     | overall cleanup function is called
[2025-11-27 01:03:31] 2025-11-27 00:03:00,745 | INFO     | --- collectZombieJob: --- 10, [1865252]
[2025-11-27 01:03:31] 2025-11-27 00:03:00,745 | INFO     | zombie collector waiting for pid 1865252
[2025-11-27 01:03:31] 2025-11-27 00:03:00,745 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 01:03:31] 2025-11-27 00:03:00,746 | INFO     | collected zombie processes
[2025-11-27 01:03:31] 2025-11-27 00:03:00,746 | INFO     | will attempt to kill all subprocesses of pid=1865252
[2025-11-27 01:03:31] 2025-11-27 00:03:00,791 | INFO     | process IDs to be killed: [1865252] (in reverse order)
[2025-11-27 01:03:31] 2025-11-27 00:03:00,818 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 01:03:31] 2025-11-27 00:03:00,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 01:03:31] 2025-11-27 00:03:00,819 | INFO     | did not find any defunct processes belonging to 1865252
[2025-11-27 01:03:31] 2025-11-27 00:03:00,820 | INFO     | did not find any defunct processes belonging to 1865252
[2025-11-27 01:03:31] 2025-11-27 00:03:00,821 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 01:03:31] 2025-11-27 00:03:00,821 | INFO     | ready for new job
[2025-11-27 01:03:31] 2025-11-27 00:03:00,821 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 01:03:31] 2025-11-27 00:03:00,822 | INFO     | ***************************************
[2025-11-27 01:03:31] 2025-11-27 00:03:00,822 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 01:03:31] 2025-11-27 00:03:00,822 | INFO     | ***************************************
[2025-11-27 01:03:31] 2025-11-27 00:03:00,822 | INFO     | 
[2025-11-27 01:03:31] 2025-11-27 00:03:00,822 | INFO     | architecture information:
[2025-11-27 01:03:31] 2025-11-27 00:03:00,823 | INFO     | executing command: cat /etc/os-release
[2025-11-27 01:03:31] 2025-11-27 00:03:00,833 | INFO     | cat /etc/os-release:
[2025-11-27 01:03:31] NAME="CentOS Linux"
[2025-11-27 01:03:31] VERSION="7 (Core)"
[2025-11-27 01:03:31] ID="centos"
[2025-11-27 01:03:31] ID_LIKE="rhel fedora"
[2025-11-27 01:03:31] VERSION_ID="7"
[2025-11-27 01:03:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 01:03:31] ANSI_COLOR="0;31"
[2025-11-27 01:03:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 01:03:31] HOME_URL="https://www.centos.org/"
[2025-11-27 01:03:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 01:03:31] 
[2025-11-27 01:03:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 01:03:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 01:03:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 01:03:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 01:03:31] 
[2025-11-27 01:03:31] 2025-11-27 00:03:00,833 | INFO     | ***************************************
[2025-11-27 01:03:31] 2025-11-27 00:03:01,336 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 01:03:31] 2025-11-27 00:03:01,350 | INFO     | sufficient remaining disk space (857509724160 B)
[2025-11-27 01:03:31] 2025-11-27 00:03:01,350 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 01:03:31] 2025-11-27 00:03:01,350 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 01:03:31] 2025-11-27 00:03:01,350 | INFO     | update_server=False
[2025-11-27 01:03:31] 2025-11-27 00:03:01,350 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 01:03:31] 2025-11-27 00:03:01,350 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:03:31] 2025-11-27 00:03:01,350 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:03:31] 2025-11-27 00:03:01,350 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 01:03:31] 2025-11-27 00:03:01,351 | INFO     | aborting loop
[2025-11-27 01:03:31] 2025-11-27 00:03:01,552 | INFO     | all data control threads have been joined
[2025-11-27 01:03:31] 2025-11-27 00:03:01,892 | INFO     | all payload control threads have been joined
[2025-11-27 01:03:31] 2025-11-27 00:03:02,356 | INFO     | [job] retrieve thread has finished
[2025-11-27 01:03:31] 2025-11-27 00:03:02,357 | INFO     | [job] queue monitor thread has finished
[2025-11-27 01:03:31] 2025-11-27 00:03:02,357 | INFO     | [job] job monitor thread has finished
[2025-11-27 01:03:31] 2025-11-27 00:03:02,376 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 01:03:31] 2025-11-27 00:03:02,483 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 01:03:31] 2025-11-27 00:03:02,535 | INFO     | [data] copytool_in thread has finished
[2025-11-27 01:03:31] 2025-11-27 00:03:02,557 | INFO     | [data] control thread has finished
[2025-11-27 01:03:31] 2025-11-27 00:03:02,836 | INFO     | all job control threads have been joined
[2025-11-27 01:03:31] 2025-11-27 00:03:02,858 | INFO     | [job] validate thread has finished
[2025-11-27 01:03:31] 2025-11-27 00:03:02,897 | INFO     | [payload] control thread has finished
[2025-11-27 01:03:31] 2025-11-27 00:03:02,923 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 01:03:31] 2025-11-27 00:03:03,357 | INFO     | [data] copytool_out thread has finished
[2025-11-27 01:03:31] 2025-11-27 00:03:03,366 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 01:03:31] 2025-11-27 00:03:03,482 | INFO     | [payload] failed_post thread has finished
[2025-11-27 01:03:31] 2025-11-27 00:03:03,642 | INFO     | [payload] validate_post thread has finished
[2025-11-27 01:03:31] 2025-11-27 00:03:03,776 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 01:03:31] 2025-11-27 00:03:03,837 | INFO     | [job] control thread has finished
[2025-11-27 01:03:31] 2025-11-27 00:03:05,555 | INFO     | [monitor] cgroup control has ended
[2025-11-27 01:03:31] 2025-11-27 00:03:07,373 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 01:03:31] 2025-11-27 00:03:08,187 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140073644029760)>', '<ExcThread(monitor, started 140072691160832)>']
[2025-11-27 01:03:31] 2025-11-27 00:03:13,213 | INFO     | all workflow threads have been joined
[2025-11-27 01:03:31] 2025-11-27 00:03:13,214 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 01:03:31] 2025-11-27 00:03:13,214 | INFO     | traces error code: 0
[2025-11-27 01:03:31] 2025-11-27 00:03:13,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 01:03:31] 2025-11-27 00:03:31,777 | INFO     | PID=1858795 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 01:03:31] 2025-11-27 00:03:31,777 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 01:03:31] 2025-11-27 00:03:31,777 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 01:03:31] 2025-11-27 00:03:31,777 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 01:03:31] 2025-11-27 00:03:31,777 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 01:03:31] 2025-11-27 00:03:31,777 | INFO     | [monitor] control thread has ended
[2025-11-27 01:03:31] 2025-11-27 00:03:31,824 [wrapper] ==== pilot stdout END ====
[2025-11-27 01:03:31] 2025-11-27 00:03:31,827 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 01:03:31] 2025-11-27 00:03:31,829 [wrapper] pilotpid: 1858795
[2025-11-27 01:03:31] 2025-11-27 00:03:31,832 [wrapper] Pilot exit status: 0
[2025-11-27 01:03:31] 2025-11-27 00:03:31,839 [wrapper] pandaids: 6896764162
[2025-11-27 01:03:31] 2025-11-27 00:03:31,856 [wrapper] cleanup supervisor_pilot 1896655 1858796
[2025-11-27 01:03:31] 2025-11-27 00:03:31,859 [wrapper] Test setup, not cleaning
[2025-11-27 01:03:31] 2025-11-27 00:03:31,862 [wrapper] apfmon messages muted
[2025-11-27 01:03:31] 2025-11-27 00:03:31,864 [wrapper] ==== wrapper stdout END ====
[2025-11-27 01:03:31] 2025-11-27 00:03:31,867 [wrapper] ==== wrapper stderr END ====
[2025-11-27 01:03:31]  *** Error codes and diagnostics ***
[2025-11-27 01:03:31]     "exeErrorCode": 0,
[2025-11-27 01:03:31]     "exeErrorDiag": "",
[2025-11-27 01:03:31]     "pilotErrorCode": 0,
[2025-11-27 01:03:31]     "pilotErrorDiag": "",
[2025-11-27 01:03:31]  *** Listing of results directory ***
[2025-11-27 01:03:31] total 1308032
[2025-11-27 01:03:31] -rw-r--r-- 1 boinc boinc    576529 Nov 25 09:00 pilot3.tar.gz
[2025-11-27 01:03:31] -rw-r--r-- 1 boinc boinc      5112 Nov 25 09:37 queuedata.json
[2025-11-27 01:03:31] -rwx------ 1 boinc boinc     36292 Nov 25 09:38 runpilot2-wrapper.sh
[2025-11-27 01:03:31] -rw-r--r-- 1 boinc boinc       100 Nov 26 20:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 01:03:31] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 20:25 run_atlas
[2025-11-27 01:03:31] -rw-r--r-- 1 boinc boinc       105 Nov 26 20:25 job.xml
[2025-11-27 01:03:31] -rw-r--r-- 2 boinc boinc 409499365 Nov 26 20:25 EVNT.47483658._004250.pool.root.1
[2025-11-27 01:03:31] -rw-r--r-- 2 boinc boinc    590102 Nov 26 20:25 input.tar.gz
[2025-11-27 01:03:31] -rw-r--r-- 2 boinc boinc     15847 Nov 26 20:25 start_atlas.sh
[2025-11-27 01:03:31] drwxrwx--x 2 boinc boinc      4096 Nov 26 20:25 shared
[2025-11-27 01:03:31] -rw-r--r-- 1 boinc boinc         0 Nov 26 20:25 boinc_setup_complete
[2025-11-27 01:03:31] -rw-r--r-- 1 boinc boinc      6272 Nov 26 20:25 init_data.xml
[2025-11-27 01:03:31] -rw-r--r-- 1 boinc boinc         0 Nov 26 20:25 boinc_lockfile
[2025-11-27 01:03:31] -rw-r--r-- 1 boinc boinc      2784 Nov 26 20:25 pandaJob.out
[2025-11-27 01:03:31] -rw------- 1 boinc boinc    991522 Nov 26 20:25 agis_schedconf.cvmfs.json
[2025-11-27 01:03:31] drwx------ 5 boinc boinc      4096 Nov 26 20:25 pilot3
[2025-11-27 01:03:31] -rw-r--r-- 1 boinc boinc       533 Nov 27 00:57 boinc_task_state.xml
[2025-11-27 01:03:31] -rw------- 1 boinc boinc 917269650 Nov 27 01:02 HITS.47556185._000136.pool.root.1
[2025-11-27 01:03:31] -rw------- 1 boinc boinc        95 Nov 27 01:02 pilot_heartbeat.json
[2025-11-27 01:03:31] -rw------- 1 boinc boinc      1034 Nov 27 01:02 memory_monitor_summary.json
[2025-11-27 01:03:31] -rw------- 1 boinc boinc   1516240 Nov 27 01:02 agis_ddmendpoints.agis.ALL.json
[2025-11-27 01:03:31] -rw------- 1 boinc boinc   2023103 Nov 27 01:02 log.47556185._000136.job.log.tgz.1
[2025-11-27 01:03:31] -rw------- 1 boinc boinc      8586 Nov 27 01:02 heartbeat.json
[2025-11-27 01:03:31] -rw-r--r-- 1 boinc boinc      8192 Nov 27 01:03 boinc_mmap_file
[2025-11-27 01:03:31] -rw-r--r-- 1 boinc boinc        29 Nov 27 01:03 wrapper_checkpoint.txt
[2025-11-27 01:03:31] -rw------- 1 boinc boinc       747 Nov 27 01:03 pilotlog.txt
[2025-11-27 01:03:31] -rw------- 1 boinc boinc   2347527 Nov 27 01:03 log.47556185._000136.job.log.1
[2025-11-27 01:03:31] -rw------- 1 boinc boinc       353 Nov 27 01:03 output.list
[2025-11-27 01:03:31] -rw-r--r-- 1 boinc boinc       620 Nov 27 01:03 runtime_log
[2025-11-27 01:03:31] -rw------- 1 boinc boinc   4392960 Nov 27 01:03 result.tar.gz
[2025-11-27 01:03:31] -rw-r--r-- 1 boinc boinc      8910 Nov 27 01:03 runtime_log.err
[2025-11-27 01:03:31] -rw------- 1 boinc boinc       670 Nov 27 01:03 8JZKDmUk3h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9FMKDmDuwRJn.diag
[2025-11-27 01:03:31] -rw-r--r-- 1 boinc boinc     21293 Nov 27 01:03 stderr.txt
[2025-11-27 01:03:31] HITS file was successfully produced:
[2025-11-27 01:03:31] -rw------- 1 boinc boinc 917269650 Nov 27 01:02 shared/HITS.pool.root.1
[2025-11-27 01:03:31]  *** Contents of shared directory: ***
[2025-11-27 01:03:31] total 1300568
[2025-11-27 01:03:31] -rw-r--r-- 2 boinc boinc 409499365 Nov 26 20:25 ATLAS.root_0
[2025-11-27 01:03:31] -rw-r--r-- 2 boinc boinc    590102 Nov 26 20:25 input.tar.gz
[2025-11-27 01:03:31] -rw-r--r-- 2 boinc boinc     15847 Nov 26 20:25 start_atlas.sh
[2025-11-27 01:03:31] -rw------- 1 boinc boinc 917269650 Nov 27 01:02 HITS.pool.root.1
[2025-11-27 01:03:31] -rw------- 1 boinc boinc   4392960 Nov 27 01:03 result.tar.gz
01:03:33 (1855065): run_atlas exited; CPU time 190955.458881
01:03:33 (1855065): called boinc_finish(0)

</stderr_txt>
]]>

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