Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:16:56 (4039350): wrapper (7.7.26015): starting
03:16:56 (4039350): wrapper: running run_atlas (--nthreads 2)
[2025-11-29 03:16:56] Arguments: --nthreads 2
[2025-11-29 03:16:56] Threads: 2
[2025-11-29 03:16:56] Checking for CVMFS
[2025-11-29 03:16:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 03:16:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 03:16:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 03:16:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 03:16:56] 2.9.2.0 2293154 14965 65868 153425 0 81 32162115 36864000 0 130560 1 4836288 99.939 702680 1730 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-29 03:16:56] CVMFS is ok
[2025-11-29 03:16:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 03:16:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 03:16:57] Further information can be found at the LHC@home message board.
[2025-11-29 03:16:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 03:16:57] Checking for apptainer binary...
[2025-11-29 03:16:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 03:16:57] Running /usr/bin/apptainer --version
[2025-11-29 03:16:57] apptainer version 1.4.1-1.1
[2025-11-29 03:16:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 03:16:57] belleA253a
[2025-11-29 03:16:57] apptainer works
[2025-11-29 03:16:57] Set ATHENA_PROC_NUMBER=2
[2025-11-29 03:16:57] Set ATHENA_CORE_NUMBER=2
[2025-11-29 03:16:57] Starting ATLAS job with PandaID=6896764206
[2025-11-29 03:16:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 15:43:41]  *** The last 200 lines of the pilot log: ***
[2025-11-29 15:43:41] 2025-11-29 14:43:08,414 | INFO     | time since job start (44758s) is within the limit (172800.0s)
[2025-11-29 15:43:41] 2025-11-29 14:43:09,221 | INFO     | monitor loop #3415: job 0:6896764206 is in state 'finished'
[2025-11-29 15:43:41] 2025-11-29 14:43:09,221 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 15:43:41] 2025-11-29 14:43:09,333 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-29 15:43:41] 2025-11-29 14:43:09,334 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 2988.3227499999994
[2025-11-29 15:43:41] 2025-11-29 14:43:09,335 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6896764206/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 15:43:41] 2025-11-29 14:43:09,335 | INFO     | extracted standard info from prmon json
[2025-11-29 15:43:41] 2025-11-29 14:43:09,335 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 15:43:41] 2025-11-29 14:43:09,335 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 15:43:41] 2025-11-29 14:43:09,340 | INFO     | fitting pss+swap vs Time
[2025-11-29 15:43:41] 2025-11-29 14:43:09,340 | INFO     | sum of square deviations: 122621266547.5
[2025-11-29 15:43:41] 2025-11-29 14:43:09,346 | INFO     | sum of deviations: 230319154057.00003
[2025-11-29 15:43:41] 2025-11-29 14:43:09,346 | INFO     | mean x: 1764405016.5
[2025-11-29 15:43:41] 2025-11-29 14:43:09,346 | INFO     | mean y: 2023218.8283378747
[2025-11-29 15:43:41] 2025-11-29 14:43:09,346 | INFO     | intersect: -3312053386.772442
[2025-11-29 15:43:41] 2025-11-29 14:43:09,346 | INFO     | chi2: 3.7176345625598337
[2025-11-29 15:43:41] 2025-11-29 14:43:09,347 | INFO     | sum of square deviations: 120132410580.0
[2025-11-29 15:43:41] 2025-11-29 14:43:09,352 | INFO     | sum of deviations: 328755687804.9998
[2025-11-29 15:43:41] 2025-11-29 14:43:09,352 | INFO     | mean x: 1764404864.0
[2025-11-29 15:43:41] 2025-11-29 14:43:09,352 | INFO     | mean y: 2029233.257887517
[2025-11-29 15:43:41] 2025-11-29 14:43:09,352 | INFO     | intersect: -4826460695.731991
[2025-11-29 15:43:41] 2025-11-29 14:43:09,353 | INFO     | chi2: 2.1520920893371662
[2025-11-29 15:43:41] 2025-11-29 14:43:09,353 | INFO     | current chi2=2.1520920893371662 (change=42.111252380456925 %)
[2025-11-29 15:43:41] 2025-11-29 14:43:09,353 | INFO     | sum of square deviations: 117677462225.0
[2025-11-29 15:43:41] 2025-11-29 14:43:09,358 | INFO     | sum of deviations: 326488482413.49994
[2025-11-29 15:43:41] 2025-11-29 14:43:09,358 | INFO     | mean x: 1764404711.5
[2025-11-29 15:43:41] 2025-11-29 14:43:09,359 | INFO     | mean y: 2029092.429558011
[2025-11-29 15:43:41] 2025-11-29 14:43:09,359 | INFO     | intersect: -4893197280.819708
[2025-11-29 15:43:41] 2025-11-29 14:43:09,359 | INFO     | chi2: 2.1511906056168253
[2025-11-29 15:43:41] 2025-11-29 14:43:09,359 | INFO     | current chi2=2.1511906056168253 (change=0.04188871493034421 %)
[2025-11-29 15:43:41] 2025-11-29 14:43:09,359 | INFO     | right removable region: 723
[2025-11-29 15:43:41] 2025-11-29 14:43:09,359 | INFO     | sum of square deviations: 120132410580.0
[2025-11-29 15:43:41] 2025-11-29 14:43:09,365 | INFO     | sum of deviations: 98317358230.99998
[2025-11-29 15:43:41] 2025-11-29 14:43:09,365 | INFO     | mean x: 1764405169.0
[2025-11-29 15:43:41] 2025-11-29 14:43:09,365 | INFO     | mean y: 2031297.7832647462
[2025-11-29 15:43:41] 2025-11-29 14:43:09,365 | INFO     | intersect: -1441972482.9423437
[2025-11-29 15:43:41] 2025-11-29 14:43:09,365 | INFO     | chi2: 1.8132928754632327
[2025-11-29 15:43:41] 2025-11-29 14:43:09,366 | INFO     | current chi2=1.8132928754632327 (change=51.22455300677369 %)
[2025-11-29 15:43:41] 2025-11-29 14:43:09,366 | INFO     | sum of square deviations: 117677462225.0
[2025-11-29 15:43:41] 2025-11-29 14:43:09,371 | INFO     | sum of deviations: 71249023610.5
[2025-11-29 15:43:41] 2025-11-29 14:43:09,371 | INFO     | mean x: 1764405321.5
[2025-11-29 15:43:41] 2025-11-29 14:43:09,371 | INFO     | mean y: 2032973.2361878452
[2025-11-29 15:43:41] 2025-11-29 14:43:09,371 | INFO     | intersect: -1066244282.5197442
[2025-11-29 15:43:41] 2025-11-29 14:43:09,371 | INFO     | chi2: 1.6357915151294988
[2025-11-29 15:43:41] 2025-11-29 14:43:09,371 | INFO     | current chi2=1.6357915151294988 (change=9.788896362833196 %)
[2025-11-29 15:43:41] 2025-11-29 14:43:09,371 | INFO     | left removable region: 20
[2025-11-29 15:43:41] 2025-11-29 14:43:09,372 | INFO     | sum of square deviations: 107731701792.0
[2025-11-29 15:43:41] 2025-11-29 14:43:09,376 | INFO     | sum of deviations: 154529156765.0
[2025-11-29 15:43:41] 2025-11-29 14:43:09,376 | INFO     | mean x: 1764405291.0
[2025-11-29 15:43:41] 2025-11-29 14:43:09,376 | INFO     | mean y: 2039935.6386913229
[2025-11-29 15:43:41] 2025-11-29 14:43:09,376 | INFO     | intersect: -2528803421.2809815
[2025-11-29 15:43:41] 2025-11-29 14:43:09,376 | INFO     | chi2: 0.05610266378926217
[2025-11-29 15:43:41] 2025-11-29 14:43:09,376 | INFO     | current memory leak: 1.43 B/s (using 703 data points, chi2=0.06)
[2025-11-29 15:43:41] 2025-11-29 14:43:09,376 | INFO     | could have reported an average CPU frequency of 4510 MHz (28 samples)
[2025-11-29 15:43:41] 2025-11-29 14:43:09,376 | INFO     | ..............................
[2025-11-29 15:43:41] 2025-11-29 14:43:09,376 | INFO     | . Timing measurements:
[2025-11-29 15:43:41] 2025-11-29 14:43:09,376 | INFO     | . get job = 0 s
[2025-11-29 15:43:41] 2025-11-29 14:43:09,376 | INFO     | . initial setup = 1 s
[2025-11-29 15:43:41] 2025-11-29 14:43:09,376 | INFO     | . payload setup = 8 s
[2025-11-29 15:43:41] 2025-11-29 14:43:09,377 | INFO     | . stage-in = 0 s
[2025-11-29 15:43:41] 2025-11-29 14:43:09,377 | INFO     | . payload execution = 44717 s
[2025-11-29 15:43:41] 2025-11-29 14:43:09,377 | INFO     | . stage-out = 0 s
[2025-11-29 15:43:41] 2025-11-29 14:43:09,377 | INFO     | . log creation = 0 s
[2025-11-29 15:43:41] 2025-11-29 14:43:09,377 | INFO     | ..............................
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | 
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | job summary report
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | --------------------------------------------------
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | PanDA job id: 6896764206
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | task id: 47556185
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | errors: (none)
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | pilot state: finished 
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | transexitcode: 0
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | exeerrorcode: 0
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | exeerrordiag: 
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | exitcode: 0
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | exitmsg: OK
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | cpuconsumptiontime: 88604 s
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | nevents: 1000
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | neventsw: 0
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | pid: 4049483
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | pgrp: 4049483
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | corecount: 2
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | event service: False
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | sizes: {0: 2284265, 7: 2284527, 11: 2284555, 44730: 2330887, 44731: 2339887, 44733: 2339943, 44742: 2340345}
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | --------------------------------------------------
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | 
[2025-11-29 15:43:41] 2025-11-29 14:43:09,405 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-29 15:43:41] 2025-11-29 14:43:09,416 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 15:43:41] 2025-11-29 14:43:09,416 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 15:43:41] 2025-11-29 14:43:09,416 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 15:43:41] 2025-11-29 14:43:09,416 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 15:43:41] 2025-11-29 14:43:09,416 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 15:43:41] 2025-11-29 14:43:09,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 15:43:41] 2025-11-29 14:43:09,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 15:43:41] 2025-11-29 14:43:09,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 15:43:41] 2025-11-29 14:43:09,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 15:43:41] 2025-11-29 14:43:09,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 15:43:41] 2025-11-29 14:43:09,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 15:43:41] 2025-11-29 14:43:09,416 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 15:43:41] 2025-11-29 14:43:09,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 15:43:41] 2025-11-29 14:43:09,416 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 15:43:41] 2025-11-29 14:43:09,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 15:43:41] 2025-11-29 14:43:09,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 15:43:41] 2025-11-29 14:43:09,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 15:43:41] 2025-11-29 14:43:09,417 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 15:43:41] 2025-11-29 14:43:09,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 15:43:41] 2025-11-29 14:43:09,417 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 15:43:41] 2025-11-29 14:43:09,417 | INFO     | job 6896764206 has completed (purged errors)
[2025-11-29 15:43:41] 2025-11-29 14:43:09,417 | INFO     | overall cleanup function is called
[2025-11-29 15:43:41] 2025-11-29 14:43:10,424 | INFO     | --- collectZombieJob: --- 10, [4049483]
[2025-11-29 15:43:41] 2025-11-29 14:43:10,424 | INFO     | zombie collector waiting for pid 4049483
[2025-11-29 15:43:41] 2025-11-29 14:43:10,425 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 15:43:41] 2025-11-29 14:43:10,425 | INFO     | collected zombie processes
[2025-11-29 15:43:41] 2025-11-29 14:43:10,425 | INFO     | will attempt to kill all subprocesses of pid=4049483
[2025-11-29 15:43:41] 2025-11-29 14:43:10,458 | INFO     | process IDs to be killed: [4049483] (in reverse order)
[2025-11-29 15:43:41] 2025-11-29 14:43:10,478 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 15:43:41] 2025-11-29 14:43:10,479 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 15:43:41] 2025-11-29 14:43:10,479 | INFO     | did not find any defunct processes belonging to 4049483
[2025-11-29 15:43:41] 2025-11-29 14:43:10,480 | INFO     | did not find any defunct processes belonging to 4049483
[2025-11-29 15:43:41] 2025-11-29 14:43:10,481 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 15:43:41] 2025-11-29 14:43:10,481 | INFO     | ready for new job
[2025-11-29 15:43:41] 2025-11-29 14:43:10,481 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 15:43:41] 2025-11-29 14:43:10,482 | INFO     | ***************************************
[2025-11-29 15:43:41] 2025-11-29 14:43:10,482 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 15:43:41] 2025-11-29 14:43:10,482 | INFO     | ***************************************
[2025-11-29 15:43:41] 2025-11-29 14:43:10,482 | INFO     | 
[2025-11-29 15:43:41] 2025-11-29 14:43:10,482 | INFO     | architecture information:
[2025-11-29 15:43:41] 2025-11-29 14:43:10,482 | INFO     | executing command: cat /etc/os-release
[2025-11-29 15:43:41] 2025-11-29 14:43:10,490 | INFO     | cat /etc/os-release:
[2025-11-29 15:43:41] NAME="CentOS Linux"
[2025-11-29 15:43:41] VERSION="7 (Core)"
[2025-11-29 15:43:41] ID="centos"
[2025-11-29 15:43:41] ID_LIKE="rhel fedora"
[2025-11-29 15:43:41] VERSION_ID="7"
[2025-11-29 15:43:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 15:43:41] ANSI_COLOR="0;31"
[2025-11-29 15:43:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 15:43:41] HOME_URL="https://www.centos.org/"
[2025-11-29 15:43:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 15:43:41] 
[2025-11-29 15:43:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 15:43:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 15:43:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 15:43:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 15:43:41] 
[2025-11-29 15:43:41] 2025-11-29 14:43:10,490 | INFO     | ***************************************
[2025-11-29 15:43:41] 2025-11-29 14:43:10,994 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-29 15:43:41] 2025-11-29 14:43:11,005 | INFO     | sufficient remaining disk space (489582231552 B)
[2025-11-29 15:43:41] 2025-11-29 14:43:11,005 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 15:43:41] 2025-11-29 14:43:11,006 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 15:43:41] 2025-11-29 14:43:11,006 | INFO     | update_server=False
[2025-11-29 15:43:41] 2025-11-29 14:43:11,006 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 15:43:41] 2025-11-29 14:43:11,006 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 15:43:41] 2025-11-29 14:43:11,006 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 15:43:41] 2025-11-29 14:43:11,006 | INFO     | aborting loop
[2025-11-29 15:43:41] 2025-11-29 14:43:11,665 | INFO     | all data control threads have been joined
[2025-11-29 15:43:41] 2025-11-29 14:43:11,738 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 15:43:41] 2025-11-29 14:43:11,981 | INFO     | all job control threads have been joined
[2025-11-29 15:43:41] 2025-11-29 14:43:12,011 | INFO     | [job] retrieve thread has finished
[2025-11-29 15:43:41] 2025-11-29 14:43:12,012 | INFO     | [job] queue monitor thread has finished
[2025-11-29 15:43:41] 2025-11-29 14:43:12,013 | INFO     | [job] job monitor thread has finished
[2025-11-29 15:43:41] 2025-11-29 14:43:12,025 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 15:43:41] 2025-11-29 14:43:12,067 | INFO     | [data] copytool_in thread has finished
[2025-11-29 15:43:41] 2025-11-29 14:43:12,071 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 15:43:41] 2025-11-29 14:43:12,093 | INFO     | all payload control threads have been joined
[2025-11-29 15:43:41] 2025-11-29 14:43:12,136 | INFO     | [job] validate thread has finished
[2025-11-29 15:43:41] 2025-11-29 14:43:12,466 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 15:43:41] 2025-11-29 14:43:12,538 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 15:43:41] 2025-11-29 14:43:12,671 | INFO     | [data] control thread has finished
[2025-11-29 15:43:41] 2025-11-29 14:43:12,911 | INFO     | [payload] failed_post thread has finished
[2025-11-29 15:43:41] 2025-11-29 14:43:12,987 | INFO     | [job] control thread has finished
[2025-11-29 15:43:41] 2025-11-29 14:43:13,099 | INFO     | [payload] control thread has finished
[2025-11-29 15:43:41] 2025-11-29 14:43:13,416 | INFO     | [payload] validate_post thread has finished
[2025-11-29 15:43:41] 2025-11-29 14:43:14,031 | INFO     | [data] copytool_out thread has finished
[2025-11-29 15:43:41] 2025-11-29 14:43:15,726 | INFO     | [monitor] cgroup control has ended
[2025-11-29 15:43:41] 2025-11-29 14:43:15,745 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 15:43:41] 2025-11-29 14:43:21,076 | INFO     | job.realtimelogging is not enabled
[2025-11-29 15:43:41] 2025-11-29 14:43:22,082 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 15:43:41] 2025-11-29 14:43:23,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140489822336832)>', '<ExcThread(monitor, started 140489068091136)>']
[2025-11-29 15:43:41] 2025-11-29 14:43:28,454 | INFO     | all workflow threads have been joined
[2025-11-29 15:43:41] 2025-11-29 14:43:28,455 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 15:43:41] 2025-11-29 14:43:28,455 | INFO     | traces error code: 0
[2025-11-29 15:43:41] 2025-11-29 14:43:28,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 15:43:41] 2025-11-29 14:43:41,527 | INFO     | PID=4043059 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-29 15:43:41] 2025-11-29 14:43:41,527 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 15:43:41] 2025-11-29 14:43:41,527 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 15:43:41] 2025-11-29 14:43:41,527 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 15:43:41] 2025-11-29 14:43:41,528 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 15:43:41] 2025-11-29 14:43:41,528 | INFO     | [monitor] control thread has ended
[2025-11-29 15:43:41] 2025-11-29 14:43:41,567 [wrapper] ==== pilot stdout END ====
[2025-11-29 15:43:41] 2025-11-29 14:43:41,570 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 15:43:41] 2025-11-29 14:43:41,572 [wrapper] pilotpid: 4043059
[2025-11-29 15:43:41] 2025-11-29 14:43:41,575 [wrapper] Pilot exit status: 0
[2025-11-29 15:43:41] 2025-11-29 14:43:41,581 [wrapper] pandaids: 6896764206
[2025-11-29 15:43:41] 2025-11-29 14:43:41,592 [wrapper] cleanup supervisor_pilot 4123094 4043060
[2025-11-29 15:43:41] 2025-11-29 14:43:41,594 [wrapper] Test setup, not cleaning
[2025-11-29 15:43:41] 2025-11-29 14:43:41,597 [wrapper] apfmon messages muted
[2025-11-29 15:43:41] 2025-11-29 14:43:41,599 [wrapper] ==== wrapper stdout END ====
[2025-11-29 15:43:41] 2025-11-29 14:43:41,601 [wrapper] ==== wrapper stderr END ====
[2025-11-29 15:43:41]  *** Error codes and diagnostics ***
[2025-11-29 15:43:41]     "exeErrorCode": 0,
[2025-11-29 15:43:41]     "exeErrorDiag": "",
[2025-11-29 15:43:41]     "pilotErrorCode": 0,
[2025-11-29 15:43:41]     "pilotErrorDiag": "",
[2025-11-29 15:43:41]  *** Listing of results directory ***
[2025-11-29 15:43:41] total 1325316
[2025-11-29 15:43:41] -rw-r--r-- 1 boinc boinc    576529 Nov 25 09:42 pilot3.tar.gz
[2025-11-29 15:43:41] -rw-r--r-- 1 boinc boinc      5112 Nov 25 09:48 queuedata.json
[2025-11-29 15:43:41] -rwx------ 1 boinc boinc     36292 Nov 25 09:49 runpilot2-wrapper.sh
[2025-11-29 15:43:41] -rw-r--r-- 1 boinc boinc       100 Nov 29 03:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 15:43:41] -rwxr-xr-x 1 boinc boinc      7986 Nov 29 03:16 run_atlas
[2025-11-29 15:43:41] -rw-r--r-- 1 boinc boinc       105 Nov 29 03:16 job.xml
[2025-11-29 15:43:41] -rw-r--r-- 2 boinc boinc 408172861 Nov 29 03:16 EVNT.47483658._004254.pool.root.1
[2025-11-29 15:43:41] -rw-r--r-- 2 boinc boinc    590104 Nov 29 03:16 input.tar.gz
[2025-11-29 15:43:41] -rw-r--r-- 2 boinc boinc     15847 Nov 29 03:16 start_atlas.sh
[2025-11-29 15:43:41] drwxrwx--x 2 boinc boinc      4096 Nov 29 03:16 shared
[2025-11-29 15:43:41] -rw-r--r-- 1 boinc boinc         0 Nov 29 03:16 boinc_setup_complete
[2025-11-29 15:43:41] -rw-r--r-- 1 boinc boinc      6208 Nov 29 03:16 init_data.xml
[2025-11-29 15:43:41] -rw-r--r-- 1 boinc boinc         0 Nov 29 03:16 boinc_lockfile
[2025-11-29 15:43:41] -rw-r--r-- 1 boinc boinc      2784 Nov 29 03:16 pandaJob.out
[2025-11-29 15:43:41] -rw------- 1 boinc boinc    991834 Nov 29 03:17 agis_schedconf.cvmfs.json
[2025-11-29 15:43:41] drwx------ 5 boinc boinc      4096 Nov 29 03:17 pilot3
[2025-11-29 15:43:41] -rw-r--r-- 1 boinc boinc       531 Nov 29 15:39 boinc_task_state.xml
[2025-11-29 15:43:41] -rw------- 1 boinc boinc 930018877 Nov 29 15:42 HITS.47556185._000179.pool.root.1
[2025-11-29 15:43:41] -rw------- 1 boinc boinc      1022 Nov 29 15:42 memory_monitor_summary.json
[2025-11-29 15:43:41] -rw------- 1 boinc boinc   1516240 Nov 29 15:42 agis_ddmendpoints.agis.ALL.json
[2025-11-29 15:43:41] -rw------- 1 boinc boinc   1224818 Nov 29 15:42 log.47556185._000179.job.log.tgz.1
[2025-11-29 15:43:41] -rw------- 1 boinc boinc      8580 Nov 29 15:43 heartbeat.json
[2025-11-29 15:43:41] -rw-r--r-- 1 boinc boinc      8192 Nov 29 15:43 boinc_mmap_file
[2025-11-29 15:43:41] -rw-r--r-- 1 boinc boinc        28 Nov 29 15:43 wrapper_checkpoint.txt
[2025-11-29 15:43:41] -rw------- 1 boinc boinc       747 Nov 29 15:43 pilotlog.txt
[2025-11-29 15:43:41] -rw------- 1 boinc boinc        95 Nov 29 15:43 pilot_heartbeat.json
[2025-11-29 15:43:41] -rw------- 1 boinc boinc   6280545 Nov 29 15:43 log.47556185._000179.job.log.1
[2025-11-29 15:43:41] -rw------- 1 boinc boinc       353 Nov 29 15:43 output.list
[2025-11-29 15:43:41] -rw-r--r-- 1 boinc boinc       620 Nov 29 15:43 runtime_log
[2025-11-29 15:43:41] -rw------- 1 boinc boinc   7526400 Nov 29 15:43 result.tar.gz
[2025-11-29 15:43:41] -rw-r--r-- 1 boinc boinc      8918 Nov 29 15:43 runtime_log.err
[2025-11-29 15:43:41] -rw------- 1 boinc boinc       669 Nov 29 15:43 9byKDmOv3h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3GMKDm3PeM6m.diag
[2025-11-29 15:43:41] -rw-r--r-- 1 boinc boinc     21249 Nov 29 15:43 stderr.txt
[2025-11-29 15:43:41] HITS file was successfully produced:
[2025-11-29 15:43:41] -rw------- 1 boinc boinc 930018877 Nov 29 15:42 shared/HITS.pool.root.1
[2025-11-29 15:43:41]  *** Contents of shared directory: ***
[2025-11-29 15:43:41] total 1314788
[2025-11-29 15:43:41] -rw-r--r-- 2 boinc boinc 408172861 Nov 29 03:16 ATLAS.root_0
[2025-11-29 15:43:41] -rw-r--r-- 2 boinc boinc    590104 Nov 29 03:16 input.tar.gz
[2025-11-29 15:43:41] -rw-r--r-- 2 boinc boinc     15847 Nov 29 03:16 start_atlas.sh
[2025-11-29 15:43:41] -rw------- 1 boinc boinc 930018877 Nov 29 15:42 HITS.pool.root.1
[2025-11-29 15:43:41] -rw------- 1 boinc boinc   7526400 Nov 29 15:43 result.tar.gz
15:43:43 (4039350): run_atlas exited; CPU time 88739.996830
15:43:43 (4039350): called boinc_finish(0)

</stderr_txt>
]]>

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