Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:08:47 (14944): wrapper (7.7.26015): starting
01:08:47 (14944): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 01:08:47] Arguments: --nthreads 12
[2025-11-26 01:08:47] Threads: 12
[2025-11-26 01:08:47] Checking for CVMFS
[2025-11-26 01:08:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 01:08:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 01:08:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 01:08:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 01:08:47] 2.11.2.0 2910 38522 94596 153311 2 82 14439756 20275200 1 130560 0 5922069 99.851 1731233 27486 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 01:08:47] CVMFS is ok
[2025-11-26 01:08:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 01:08:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 01:08:48] Further information can be found at the LHC@home message board.
[2025-11-26 01:08:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 01:08:48] Checking for apptainer binary...
[2025-11-26 01:08:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 01:08:48] Running /usr/bin/apptainer --version
[2025-11-26 01:08:48] apptainer version 1.3.2-1.el7
[2025-11-26 01:08:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 01:08:49] c-205-11.aglt2.org
[2025-11-26 01:08:49] apptainer works
[2025-11-26 01:08:49] Set ATHENA_PROC_NUMBER=12
[2025-11-26 01:08:49] Set ATHENA_CORE_NUMBER=12
[2025-11-26 01:08:49] Starting ATLAS job with PandaID=6891572714
[2025-11-26 01:08:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:16:53]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:16:53] 2025-11-26 13:16:04,169 | INFO     | time since job start (25620s) is within the limit (172800.0s)
[2025-11-26 08:16:53] 2025-11-26 13:16:06,175 | INFO     | time since job start (25622s) is within the limit (172800.0s)
[2025-11-26 08:16:53] 2025-11-26 13:16:06,540 | INFO     | monitor loop #1920: job 0:6891572714 is in state 'finished'
[2025-11-26 08:16:53] 2025-11-26 13:16:06,540 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 08:16:53] 2025-11-26 13:16:07,741 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 08:16:53] 2025-11-26 13:16:07,746 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-26 08:16:53] 2025-11-26 13:16:07,748 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891572714/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 08:16:53] 2025-11-26 13:16:07,749 | INFO     | extracted standard info from prmon json
[2025-11-26 08:16:53] 2025-11-26 13:16:07,749 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 08:16:53] 2025-11-26 13:16:07,749 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 08:16:53] 2025-11-26 13:16:07,756 | INFO     | fitting pss+swap vs Time
[2025-11-26 08:16:53] 2025-11-26 13:16:07,756 | INFO     | sum of square deviations: 22973289358.99762
[2025-11-26 08:16:53] 2025-11-26 13:16:07,760 | INFO     | sum of deviations: 425479984405.712
[2025-11-26 08:16:53] 2025-11-26 13:16:07,760 | INFO     | mean x: 1764150153.6690476
[2025-11-26 08:16:53] 2025-11-26 13:16:07,760 | INFO     | mean y: 3537104.9547619047
[2025-11-26 08:16:53] 2025-11-26 13:16:07,760 | INFO     | intersect: -32669649922.93856
[2025-11-26 08:16:53] 2025-11-26 13:16:07,761 | INFO     | chi2: 6.379600572568425
[2025-11-26 08:16:53] 2025-11-26 13:16:07,761 | INFO     | sum of square deviations: 22162560928.85308
[2025-11-26 08:16:53] 2025-11-26 13:16:07,765 | INFO     | sum of deviations: 602108458514.5686
[2025-11-26 08:16:53] 2025-11-26 13:16:07,765 | INFO     | mean x: 1764150001.1710844
[2025-11-26 08:16:53] 2025-11-26 13:16:07,765 | INFO     | mean y: 3570293.7807228914
[2025-11-26 08:16:53] 2025-11-26 13:16:07,765 | INFO     | intersect: -47924538790.88388
[2025-11-26 08:16:53] 2025-11-26 13:16:07,766 | INFO     | chi2: 2.943967051809182
[2025-11-26 08:16:53] 2025-11-26 13:16:07,766 | INFO     | current chi2=2.943967051809182 (change=53.85342674166915 %)
[2025-11-26 08:16:53] 2025-11-26 13:16:07,766 | INFO     | sum of square deviations: 21371135186.204937
[2025-11-26 08:16:53] 2025-11-26 13:16:07,770 | INFO     | sum of deviations: 627012324578.0487
[2025-11-26 08:16:53] 2025-11-26 13:16:07,770 | INFO     | mean x: 1764149848.6731708
[2025-11-26 08:16:53] 2025-11-26 13:16:07,770 | INFO     | mean y: 3575055.7317073173
[2025-11-26 08:16:53] 2025-11-26 13:16:07,770 | INFO     | intersect: -51755196197.30839
[2025-11-26 08:16:53] 2025-11-26 13:16:07,771 | INFO     | chi2: 2.7097515771772476
[2025-11-26 08:16:53] 2025-11-26 13:16:07,771 | INFO     | current chi2=2.7097515771772476 (change=7.955777714563754 %)
[2025-11-26 08:16:53] 2025-11-26 13:16:07,771 | INFO     | right removable region: 409
[2025-11-26 08:16:53] 2025-11-26 13:16:07,772 | INFO     | sum of square deviations: 22162517618.853096
[2025-11-26 08:16:53] 2025-11-26 13:16:07,775 | INFO     | sum of deviations: 275219752367.82666
[2025-11-26 08:16:53] 2025-11-26 13:16:07,775 | INFO     | mean x: 1764150306.1710844
[2025-11-26 08:16:53] 2025-11-26 13:16:07,776 | INFO     | mean y: 3565291.1855421686
[2025-11-26 08:16:53] 2025-11-26 13:16:07,776 | INFO     | intersect: -21904099657.087486
[2025-11-26 08:16:53] 2025-11-26 13:16:07,776 | INFO     | chi2: 3.9149333347188406
[2025-11-26 08:16:53] 2025-11-26 13:16:07,776 | INFO     | current chi2=3.9149333347188406 (change=38.63356662872249 %)
[2025-11-26 08:16:53] 2025-11-26 13:16:07,777 | INFO     | sum of square deviations: 21371048566.204937
[2025-11-26 08:16:53] 2025-11-26 13:16:07,780 | INFO     | sum of deviations: 232476581051.87808
[2025-11-26 08:16:53] 2025-11-26 13:16:07,780 | INFO     | mean x: 1764150458.6731708
[2025-11-26 08:16:53] 2025-11-26 13:16:07,781 | INFO     | mean y: 3573523.1707317075
[2025-11-26 08:16:53] 2025-11-26 13:16:07,781 | INFO     | intersect: -19187046245.575172
[2025-11-26 08:16:53] 2025-11-26 13:16:07,781 | INFO     | chi2: 3.817482243171073
[2025-11-26 08:16:53] 2025-11-26 13:16:07,781 | INFO     | current chi2=3.817482243171073 (change=2.4892145846658766 %)
[2025-11-26 08:16:53] 2025-11-26 13:16:07,781 | INFO     | left removable region: 20
[2025-11-26 08:16:53] 2025-11-26 13:16:07,782 | INFO     | sum of square deviations: 18252510946.76092
[2025-11-26 08:16:53] 2025-11-26 13:16:07,785 | INFO     | sum of deviations: 376183551465.0744
[2025-11-26 08:16:53] 2025-11-26 13:16:07,785 | INFO     | mean x: 1764150428.177378
[2025-11-26 08:16:53] 2025-11-26 13:16:07,785 | INFO     | mean y: 3624494.622107969
[2025-11-26 08:16:53] 2025-11-26 13:16:07,786 | INFO     | intersect: -36355448255.758446
[2025-11-26 08:16:53] 2025-11-26 13:16:07,786 | INFO     | chi2: 0.06191236729967092
[2025-11-26 08:16:53] 2025-11-26 13:16:07,786 | INFO     | current memory leak: 20.61 B/s (using 389 data points, chi2=0.06)
[2025-11-26 08:16:53] 2025-11-26 13:16:07,787 | INFO     | could have reported an average CPU frequency of 2346 MHz (18 samples)
[2025-11-26 08:16:53] 2025-11-26 13:16:07,787 | INFO     | ..............................
[2025-11-26 08:16:53] 2025-11-26 13:16:07,787 | INFO     | . Timing measurements:
[2025-11-26 08:16:53] 2025-11-26 13:16:07,787 | INFO     | . get job = 0 s
[2025-11-26 08:16:53] 2025-11-26 13:16:07,787 | INFO     | . initial setup = 2 s
[2025-11-26 08:16:53] 2025-11-26 13:16:07,787 | INFO     | . payload setup = 7 s
[2025-11-26 08:16:53] 2025-11-26 13:16:07,787 | INFO     | . stage-in = 0 s
[2025-11-26 08:16:53] 2025-11-26 13:16:07,787 | INFO     | . payload execution = 25585 s
[2025-11-26 08:16:53] 2025-11-26 13:16:07,787 | INFO     | . stage-out = 3 s
[2025-11-26 08:16:53] 2025-11-26 13:16:07,788 | INFO     | . log creation = 0 s
[2025-11-26 08:16:53] 2025-11-26 13:16:07,788 | INFO     | ..............................
[2025-11-26 08:16:53] 2025-11-26 13:16:07,868 | INFO     | 
[2025-11-26 08:16:53] 2025-11-26 13:16:07,869 | INFO     | job summary report
[2025-11-26 08:16:53] 2025-11-26 13:16:07,869 | INFO     | --------------------------------------------------
[2025-11-26 08:16:53] 2025-11-26 13:16:07,869 | INFO     | PanDA job id: 6891572714
[2025-11-26 08:16:53] 2025-11-26 13:16:07,869 | INFO     | task id: 47493068
[2025-11-26 08:16:53] 2025-11-26 13:16:07,869 | INFO     | errors: (none)
[2025-11-26 08:16:53] 2025-11-26 13:16:07,869 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 08:16:53] 2025-11-26 13:16:07,869 | INFO     | pilot state: finished 
[2025-11-26 08:16:53] 2025-11-26 13:16:07,869 | INFO     | transexitcode: 0
[2025-11-26 08:16:53] 2025-11-26 13:16:07,870 | INFO     | exeerrorcode: 0
[2025-11-26 08:16:53] 2025-11-26 13:16:07,870 | INFO     | exeerrordiag: 
[2025-11-26 08:16:53] 2025-11-26 13:16:07,870 | INFO     | exitcode: 0
[2025-11-26 08:16:53] 2025-11-26 13:16:07,870 | INFO     | exitmsg: OK
[2025-11-26 08:16:53] 2025-11-26 13:16:07,870 | INFO     | cpuconsumptiontime: 294355 s
[2025-11-26 08:16:53] 2025-11-26 13:16:07,870 | INFO     | nevents: 1000
[2025-11-26 08:16:53] 2025-11-26 13:16:07,870 | INFO     | neventsw: 0
[2025-11-26 08:16:53] 2025-11-26 13:16:07,870 | INFO     | pid: 25106
[2025-11-26 08:16:53] 2025-11-26 13:16:07,870 | INFO     | pgrp: 25106
[2025-11-26 08:16:53] 2025-11-26 13:16:07,870 | INFO     | corecount: 12
[2025-11-26 08:16:53] 2025-11-26 13:16:07,871 | INFO     | event service: False
[2025-11-26 08:16:53] 2025-11-26 13:16:07,871 | INFO     | sizes: {0: 2284133, 1: 2284332, 6: 2284594, 12: 2284622, 25594: 2321792, 25598: 2330786, 25601: 2330970, 25607: 2331216}
[2025-11-26 08:16:53] 2025-11-26 13:16:07,871 | INFO     | --------------------------------------------------
[2025-11-26 08:16:53] 2025-11-26 13:16:07,871 | INFO     | 
[2025-11-26 08:16:53] 2025-11-26 13:16:07,871 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 08:16:53] 2025-11-26 13:16:07,932 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 08:16:53] 2025-11-26 13:16:07,933 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 08:16:53] 2025-11-26 13:16:07,933 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 08:16:53] 2025-11-26 13:16:07,933 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 08:16:53] 2025-11-26 13:16:07,933 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 08:16:53] 2025-11-26 13:16:07,933 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 08:16:53] 2025-11-26 13:16:07,933 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 08:16:53] 2025-11-26 13:16:07,934 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 08:16:53] 2025-11-26 13:16:07,934 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 08:16:53] 2025-11-26 13:16:07,934 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 08:16:53] 2025-11-26 13:16:07,934 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 08:16:53] 2025-11-26 13:16:07,934 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 08:16:53] 2025-11-26 13:16:07,934 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 08:16:53] 2025-11-26 13:16:07,935 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 08:16:53] 2025-11-26 13:16:07,935 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 08:16:53] 2025-11-26 13:16:07,935 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 08:16:53] 2025-11-26 13:16:07,935 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 08:16:53] 2025-11-26 13:16:07,935 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 08:16:53] 2025-11-26 13:16:07,935 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 08:16:53] 2025-11-26 13:16:07,936 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 08:16:53] 2025-11-26 13:16:07,936 | INFO     | job 6891572714 has completed (purged errors)
[2025-11-26 08:16:53] 2025-11-26 13:16:07,936 | INFO     | overall cleanup function is called
[2025-11-26 08:16:53] 2025-11-26 13:16:08,952 | INFO     | --- collectZombieJob: --- 10, [25106]
[2025-11-26 08:16:53] 2025-11-26 13:16:08,953 | INFO     | zombie collector waiting for pid 25106
[2025-11-26 08:16:53] 2025-11-26 13:16:08,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 08:16:53] 2025-11-26 13:16:08,953 | INFO     | collected zombie processes
[2025-11-26 08:16:53] 2025-11-26 13:16:08,953 | INFO     | will attempt to kill all subprocesses of pid=25106
[2025-11-26 08:16:53] 2025-11-26 13:16:09,042 | INFO     | process IDs to be killed: [25106] (in reverse order)
[2025-11-26 08:16:53] 2025-11-26 13:16:09,095 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 08:16:53] 2025-11-26 13:16:09,095 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 08:16:53] 2025-11-26 13:16:09,098 | INFO     | did not find any defunct processes belonging to 25106
[2025-11-26 08:16:53] 2025-11-26 13:16:09,100 | INFO     | did not find any defunct processes belonging to 25106
[2025-11-26 08:16:53] 2025-11-26 13:16:09,102 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 08:16:53] 2025-11-26 13:16:09,102 | INFO     | ready for new job
[2025-11-26 08:16:53] 2025-11-26 13:16:09,103 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 08:16:53] 2025-11-26 13:16:09,105 | INFO     | ***************************************
[2025-11-26 08:16:53] 2025-11-26 13:16:09,105 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:16:53] 2025-11-26 13:16:09,105 | INFO     | ***************************************
[2025-11-26 08:16:53] 2025-11-26 13:16:09,105 | INFO     | 
[2025-11-26 08:16:53] 2025-11-26 13:16:09,105 | INFO     | architecture information:
[2025-11-26 08:16:53] 2025-11-26 13:16:09,106 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:16:53] 2025-11-26 13:16:09,128 | INFO     | cat /etc/os-release:
[2025-11-26 08:16:53] NAME="CentOS Linux"
[2025-11-26 08:16:53] VERSION="7 (Core)"
[2025-11-26 08:16:53] ID="centos"
[2025-11-26 08:16:53] ID_LIKE="rhel fedora"
[2025-11-26 08:16:53] VERSION_ID="7"
[2025-11-26 08:16:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:16:53] ANSI_COLOR="0;31"
[2025-11-26 08:16:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:16:53] HOME_URL="https://www.centos.org/"
[2025-11-26 08:16:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:16:53] 
[2025-11-26 08:16:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:16:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:16:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:16:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:16:53] 
[2025-11-26 08:16:53] 2025-11-26 13:16:09,129 | INFO     | ***************************************
[2025-11-26 08:16:53] 2025-11-26 13:16:09,632 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 08:16:53] 2025-11-26 13:16:09,720 | INFO     | sufficient remaining disk space (28292677632 B)
[2025-11-26 08:16:53] 2025-11-26 13:16:09,720 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:16:53] 2025-11-26 13:16:09,720 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:16:53] 2025-11-26 13:16:09,721 | INFO     | update_server=False
[2025-11-26 08:16:53] 2025-11-26 13:16:09,721 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:16:53] 2025-11-26 13:16:09,721 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:16:53] 2025-11-26 13:16:09,721 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:16:53] 2025-11-26 13:16:10,050 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:16:53] 2025-11-26 13:16:10,050 | INFO     | aborting loop
[2025-11-26 08:16:53] 2025-11-26 13:16:10,518 | INFO     | all job control threads have been joined
[2025-11-26 08:16:53] 2025-11-26 13:16:10,581 | INFO     | all data control threads have been joined
[2025-11-26 08:16:53] 2025-11-26 13:16:10,722 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:16:53] 2025-11-26 13:16:10,726 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:16:53] 2025-11-26 13:16:10,859 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:16:53] 2025-11-26 13:16:11,051 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:16:53] 2025-11-26 13:16:11,056 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:16:53] 2025-11-26 13:16:11,079 | INFO     | all payload control threads have been joined
[2025-11-26 08:16:53] 2025-11-26 13:16:11,337 | INFO     | [job] validate thread has finished
[2025-11-26 08:16:53] 2025-11-26 13:16:11,450 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:16:53] 2025-11-26 13:16:11,461 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:16:53] 2025-11-26 13:16:11,524 | INFO     | [job] control thread has finished
[2025-11-26 08:16:53] 2025-11-26 13:16:11,587 | INFO     | [data] control thread has finished
[2025-11-26 08:16:53] 2025-11-26 13:16:11,727 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:16:53] 2025-11-26 13:16:11,872 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:16:53] 2025-11-26 13:16:12,038 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:16:53] 2025-11-26 13:16:12,085 | INFO     | [payload] control thread has finished
[2025-11-26 08:16:53] 2025-11-26 13:16:12,144 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:16:53] 2025-11-26 13:16:12,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:16:53] 2025-11-26 13:16:16,325 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:16:53] 2025-11-26 13:16:39,385 | INFO     | PID=18699 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 08:16:53] 2025-11-26 13:16:39,386 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:16:53] 2025-11-26 13:16:39,386 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:16:53] 2025-11-26 13:16:39,386 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:16:53] 2025-11-26 13:16:46,266 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:16:53] 2025-11-26 13:16:48,087 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139720061159232)>', '<ExcThread(monitor, started 139719010662144)>']
[2025-11-26 08:16:53] 2025-11-26 13:16:48,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:16:53] 2025-11-26 13:16:48,432 | INFO     | [monitor] control thread has ended
[2025-11-26 08:16:53] 2025-11-26 13:16:53,109 | INFO     | all workflow threads have been joined
[2025-11-26 08:16:53] 2025-11-26 13:16:53,109 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:16:53] 2025-11-26 13:16:53,110 | INFO     | traces error code: 0
[2025-11-26 08:16:53] 2025-11-26 13:16:53,110 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:16:53] 2025-11-26 13:16:53,205 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:16:53] 2025-11-26 13:16:53,209 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:16:53] 2025-11-26 13:16:53,213 [wrapper] pilotpid: 18699
[2025-11-26 08:16:53] 2025-11-26 13:16:53,217 [wrapper] Pilot exit status: 0
[2025-11-26 08:16:53] 2025-11-26 13:16:53,231 [wrapper] pandaids: 6891572714
[2025-11-26 08:16:53] 2025-11-26 13:16:53,284 [wrapper] cleanup supervisor_pilot 11463 18700
[2025-11-26 08:16:53] 2025-11-26 13:16:53,289 [wrapper] Test setup, not cleaning
[2025-11-26 08:16:53] 2025-11-26 13:16:53,293 [wrapper] apfmon messages muted
[2025-11-26 08:16:53] 2025-11-26 13:16:53,296 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:16:53] 2025-11-26 13:16:53,301 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:16:53]  *** Error codes and diagnostics ***
[2025-11-26 08:16:53]     "exeErrorCode": 0,
[2025-11-26 08:16:53]     "exeErrorDiag": "",
[2025-11-26 08:16:53]     "pilotErrorCode": 0,
[2025-11-26 08:16:53]     "pilotErrorDiag": "",
[2025-11-26 08:16:53]  *** Listing of results directory ***
[2025-11-26 08:16:53] total 1304840
[2025-11-26 08:16:53] -rw-r--r-- 1 boincer umatlas    576529 Nov 18 11:24 pilot3.tar.gz
[2025-11-26 08:16:53] -rw-r--r-- 1 boincer umatlas      5112 Nov 18 11:28 queuedata.json
[2025-11-26 08:16:53] -rwx------ 1 boincer umatlas     36292 Nov 18 11:29 runpilot2-wrapper.sh
[2025-11-26 08:16:53] -rw-r--r-- 1 boincer umatlas       100 Nov 26 01:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:16:53] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 01:08 run_atlas
[2025-11-26 08:16:53] -rw-r--r-- 1 boincer umatlas       105 Nov 26 01:08 job.xml
[2025-11-26 08:16:53] -rw-r--r-- 2 boincer umatlas 407864107 Nov 26 01:08 EVNT.47493065._000349.pool.root.1
[2025-11-26 08:16:53] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 01:08 start_atlas.sh
[2025-11-26 08:16:53] drwxrwx--x 2 boincer umatlas      4096 Nov 26 01:08 shared
[2025-11-26 08:16:53] -rw-r--r-- 2 boincer umatlas    590100 Nov 26 01:08 input.tar.gz
[2025-11-26 08:16:53] -rw-r--r-- 1 boincer umatlas         0 Nov 26 01:08 boinc_lockfile
[2025-11-26 08:16:53] -rw-r--r-- 1 boincer umatlas      2773 Nov 26 01:08 pandaJob.out
[2025-11-26 08:16:53] -rw------- 1 boincer umatlas    991877 Nov 26 01:09 agis_schedconf.cvmfs.json
[2025-11-26 08:16:53] drwx------ 5 boincer umatlas      4096 Nov 26 01:09 pilot3
[2025-11-26 08:16:53] -rw-r--r-- 1 boincer umatlas       533 Nov 26 08:07 boinc_task_state.xml
[2025-11-26 08:16:53] -rw-r--r-- 1 boincer umatlas      5871 Nov 26 08:12 init_data.xml
[2025-11-26 08:16:53] -rw------- 1 boincer umatlas 912839786 Nov 26 08:15 HITS.47493068._003486.pool.root.1
[2025-11-26 08:16:53] -rw------- 1 boincer umatlas      1063 Nov 26 08:15 memory_monitor_summary.json
[2025-11-26 08:16:53] -rw------- 1 boincer umatlas   1516240 Nov 26 08:15 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:16:53] -rw------- 1 boincer umatlas   2172768 Nov 26 08:15 log.47493068._003486.job.log.tgz.1
[2025-11-26 08:16:53] -rw------- 1 boincer umatlas      8681 Nov 26 08:16 heartbeat.json
[2025-11-26 08:16:53] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 08:16 boinc_mmap_file
[2025-11-26 08:16:53] -rw-r--r-- 1 boincer umatlas        29 Nov 26 08:16 wrapper_checkpoint.txt
[2025-11-26 08:16:53] -rw------- 1 boincer umatlas        95 Nov 26 08:16 pilot_heartbeat.json
[2025-11-26 08:16:53] -rw------- 1 boincer umatlas      4746 Nov 26 08:16 pilotlog.txt
[2025-11-26 08:16:53] -rw------- 1 boincer umatlas   3595196 Nov 26 08:16 log.47493068._003486.job.log.1
[2025-11-26 08:16:53] -rw------- 1 boincer umatlas       353 Nov 26 08:16 output.list
[2025-11-26 08:16:53] -rw-r--r-- 1 boincer umatlas       620 Nov 26 08:16 runtime_log
[2025-11-26 08:16:53] -rw------- 1 boincer umatlas   5785600 Nov 26 08:16 result.tar.gz
[2025-11-26 08:16:53] -rw------- 1 boincer umatlas       670 Nov 26 08:16 vHsNDmOldf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSoFKDmgQ1vKm.diag
[2025-11-26 08:16:53] -rw-r--r-- 1 boincer umatlas      8706 Nov 26 08:16 runtime_log.err
[2025-11-26 08:16:53] -rw-r--r-- 1 boincer umatlas     21322 Nov 26 08:16 stderr.txt
[2025-11-26 08:16:53] HITS file was successfully produced:
[2025-11-26 08:16:53] -rw------- 1 boincer umatlas 912839786 Nov 26 08:15 shared/HITS.pool.root.1
[2025-11-26 08:16:53]  *** Contents of shared directory: ***
[2025-11-26 08:16:53] total 1296008
[2025-11-26 08:16:53] -rw-r--r-- 2 boincer umatlas 407864107 Nov 26 01:08 ATLAS.root_0
[2025-11-26 08:16:53] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 01:08 start_atlas.sh
[2025-11-26 08:16:53] -rw-r--r-- 2 boincer umatlas    590100 Nov 26 01:08 input.tar.gz
[2025-11-26 08:16:53] -rw------- 1 boincer umatlas 912839786 Nov 26 08:15 HITS.pool.root.1
[2025-11-26 08:16:53] -rw------- 1 boincer umatlas   5785600 Nov 26 08:16 result.tar.gz
08:16:55 (14944): run_atlas exited; CPU time 288065.489631
08:16:55 (14944): called boinc_finish(0)

</stderr_txt>
]]>

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