Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:51:47 (21728): wrapper (7.7.26015): starting
00:51:47 (21728): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 00:51:47] Arguments: --nthreads 4
[2025-11-26 00:51:47] Threads: 4
[2025-11-26 00:51:47] Checking for CVMFS
[2025-11-26 00:51:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:51:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:51:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:51:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:51:47] 2.11.2.0 2311 107047 73556 153311 0 82 15922501 20275201 1 130560 0 40811607 99.940 4684565 40898 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:51:47] CVMFS is ok
[2025-11-26 00:51:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:51:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:51:47] Further information can be found at the LHC@home message board.
[2025-11-26 00:51:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:51:47] Checking for apptainer binary...
[2025-11-26 00:51:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:51:47] Running /usr/bin/apptainer --version
[2025-11-26 00:51:47] apptainer version 1.3.2-1.el7
[2025-11-26 00:51:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:51:47] c-205-34.aglt2.org
[2025-11-26 00:51:47] apptainer works
[2025-11-26 00:51:47] Set ATHENA_PROC_NUMBER=4
[2025-11-26 00:51:47] Set ATHENA_CORE_NUMBER=4
[2025-11-26 00:51:47] Starting ATLAS job with PandaID=6896243454
[2025-11-26 00:51:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 09:59:13]  *** The last 200 lines of the pilot log: ***
[2025-11-26 09:59:13] 2025-11-26 14:58:39,949 | INFO     | number of running child processes to parent process 31804: 1
[2025-11-26 09:59:13] 2025-11-26 14:58:39,949 | INFO     | maximum number of monitored processes: 12
[2025-11-26 09:59:13] 2025-11-26 14:58:40,624 | INFO     | time since job start (32804s) is within the limit (172800.0s)
[2025-11-26 09:59:13] 2025-11-26 14:58:41,666 | INFO     | PID=25407 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 09:59:13] 2025-11-26 14:58:42,006 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 09:59:13] 2025-11-26 14:58:42,007 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3304.96175
[2025-11-26 09:59:13] 2025-11-26 14:58:42,007 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896243454/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 09:59:13] 2025-11-26 14:58:42,007 | INFO     | extracted standard info from prmon json
[2025-11-26 09:59:13] 2025-11-26 14:58:42,007 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 09:59:13] 2025-11-26 14:58:42,008 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 09:59:13] 2025-11-26 14:58:42,011 | INFO     | fitting pss+swap vs Time
[2025-11-26 09:59:13] 2025-11-26 14:58:42,012 | INFO     | sum of square deviations: 48286280234.5
[2025-11-26 09:59:13] 2025-11-26 14:58:42,015 | INFO     | sum of deviations: 190816217553.99976
[2025-11-26 09:59:13] 2025-11-26 14:58:42,015 | INFO     | mean x: 1764152716.5
[2025-11-26 09:59:13] 2025-11-26 14:58:42,015 | INFO     | mean y: 2266372.7583643124
[2025-11-26 09:59:13] 2025-11-26 14:58:42,015 | INFO     | intersect: -6969257358.52351
[2025-11-26 09:59:13] 2025-11-26 14:58:42,015 | INFO     | chi2: 2.545772345388563
[2025-11-26 09:59:13] 2025-11-26 14:58:42,016 | INFO     | sum of square deviations: 46952478482.0
[2025-11-26 09:59:13] 2025-11-26 14:58:42,019 | INFO     | sum of deviations: 260471694763.00003
[2025-11-26 09:59:13] 2025-11-26 14:58:42,019 | INFO     | mean x: 1764152564.0
[2025-11-26 09:59:13] 2025-11-26 14:58:42,019 | INFO     | mean y: 2274299.5140712946
[2025-11-26 09:59:13] 2025-11-26 14:58:42,019 | INFO     | intersect: -9784468019.993795
[2025-11-26 09:59:13] 2025-11-26 14:58:42,019 | INFO     | chi2: 1.2071801302869205
[2025-11-26 09:59:13] 2025-11-26 14:58:42,019 | INFO     | current chi2=1.2071801302869205 (change=52.58098657275391 %)
[2025-11-26 09:59:13] 2025-11-26 14:58:42,020 | INFO     | sum of square deviations: 45643467892.0
[2025-11-26 09:59:13] 2025-11-26 14:58:42,023 | INFO     | sum of deviations: 255653050149.0
[2025-11-26 09:59:13] 2025-11-26 14:58:42,023 | INFO     | mean x: 1764152411.5
[2025-11-26 09:59:13] 2025-11-26 14:58:42,023 | INFO     | mean y: 2273738.117424242
[2025-11-26 09:59:13] 2025-11-26 14:58:42,023 | INFO     | intersect: -9878897999.20226
[2025-11-26 09:59:13] 2025-11-26 14:58:42,023 | INFO     | chi2: 1.2068448880018003
[2025-11-26 09:59:13] 2025-11-26 14:58:42,023 | INFO     | current chi2=1.2068448880018003 (change=0.02777069276649569 %)
[2025-11-26 09:59:13] 2025-11-26 14:58:42,023 | INFO     | right removable region: 527
[2025-11-26 09:59:13] 2025-11-26 14:58:42,023 | INFO     | sum of square deviations: 46952478482.0
[2025-11-26 09:59:13] 2025-11-26 14:58:42,026 | INFO     | sum of deviations: 131900211611.00076
[2025-11-26 09:59:13] 2025-11-26 14:58:42,026 | INFO     | mean x: 1764152869.0
[2025-11-26 09:59:13] 2025-11-26 14:58:42,027 | INFO     | mean y: 2273073.163227017
[2025-11-26 09:59:13] 2025-11-26 14:58:42,027 | INFO     | intersect: -4953634351.925322
[2025-11-26 09:59:13] 2025-11-26 14:58:42,027 | INFO     | chi2: 1.393968429701065
[2025-11-26 09:59:13] 2025-11-26 14:58:42,027 | INFO     | current chi2=1.393968429701065 (change=45.243790858750074 %)
[2025-11-26 09:59:13] 2025-11-26 14:58:42,027 | INFO     | sum of square deviations: 45643467892.0
[2025-11-26 09:59:13] 2025-11-26 14:58:42,030 | INFO     | sum of deviations: 128668867883.00005
[2025-11-26 09:59:13] 2025-11-26 14:58:42,030 | INFO     | mean x: 1764153021.5
[2025-11-26 09:59:13] 2025-11-26 14:58:42,030 | INFO     | mean y: 2273449.0568181816
[2025-11-26 09:59:13] 2025-11-26 14:58:42,030 | INFO     | intersect: -4970871286.261683
[2025-11-26 09:59:13] 2025-11-26 14:58:42,031 | INFO     | chi2: 1.393676135701892
[2025-11-26 09:59:13] 2025-11-26 14:58:42,031 | INFO     | current chi2=1.393676135701892 (change=0.020968480558461983 %)
[2025-11-26 09:59:13] 2025-11-26 14:58:42,031 | INFO     | left removable region: 20
[2025-11-26 09:59:13] 2025-11-26 14:58:42,031 | INFO     | sum of square deviations: 40411094438.0
[2025-11-26 09:59:13] 2025-11-26 14:58:42,034 | INFO     | sum of deviations: 190312316439.99997
[2025-11-26 09:59:13] 2025-11-26 14:58:42,034 | INFO     | mean x: 1764152991.0
[2025-11-26 09:59:13] 2025-11-26 14:58:42,034 | INFO     | mean y: 2281289.680473373
[2025-11-26 09:59:13] 2025-11-26 14:58:42,034 | INFO     | intersect: -8305834264.746482
[2025-11-26 09:59:13] 2025-11-26 14:58:42,034 | INFO     | chi2: 0.03824759742695944
[2025-11-26 09:59:13] 2025-11-26 14:58:42,034 | INFO     | current memory leak: 4.71 B/s (using 507 data points, chi2=0.04)
[2025-11-26 09:59:13] 2025-11-26 14:58:42,034 | INFO     | could have reported an average CPU frequency of 3246 MHz (21 samples)
[2025-11-26 09:59:13] 2025-11-26 14:58:42,034 | INFO     | ..............................
[2025-11-26 09:59:13] 2025-11-26 14:58:42,035 | INFO     | . Timing measurements:
[2025-11-26 09:59:13] 2025-11-26 14:58:42,035 | INFO     | . get job = 0 s
[2025-11-26 09:59:13] 2025-11-26 14:58:42,035 | INFO     | . initial setup = 2 s
[2025-11-26 09:59:13] 2025-11-26 14:58:42,035 | INFO     | . payload setup = 4 s
[2025-11-26 09:59:13] 2025-11-26 14:58:42,035 | INFO     | . stage-in = 0 s
[2025-11-26 09:59:13] 2025-11-26 14:58:42,035 | INFO     | . payload execution = 32775 s
[2025-11-26 09:59:13] 2025-11-26 14:58:42,035 | INFO     | . stage-out = 2 s
[2025-11-26 09:59:13] 2025-11-26 14:58:42,035 | INFO     | . log creation = 0 s
[2025-11-26 09:59:13] 2025-11-26 14:58:42,035 | INFO     | ..............................
[2025-11-26 09:59:13] 2025-11-26 14:58:42,072 | INFO     | 
[2025-11-26 09:59:13] 2025-11-26 14:58:42,072 | INFO     | job summary report
[2025-11-26 09:59:13] 2025-11-26 14:58:42,072 | INFO     | --------------------------------------------------
[2025-11-26 09:59:13] 2025-11-26 14:58:42,072 | INFO     | PanDA job id: 6896243454
[2025-11-26 09:59:13] 2025-11-26 14:58:42,072 | INFO     | task id: 47556149
[2025-11-26 09:59:13] 2025-11-26 14:58:42,072 | INFO     | errors: (none)
[2025-11-26 09:59:13] 2025-11-26 14:58:42,072 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 09:59:13] 2025-11-26 14:58:42,072 | INFO     | pilot state: finished 
[2025-11-26 09:59:13] 2025-11-26 14:58:42,072 | INFO     | transexitcode: 0
[2025-11-26 09:59:13] 2025-11-26 14:58:42,072 | INFO     | exeerrorcode: 0
[2025-11-26 09:59:13] 2025-11-26 14:58:42,072 | INFO     | exeerrordiag: 
[2025-11-26 09:59:13] 2025-11-26 14:58:42,072 | INFO     | exitcode: 0
[2025-11-26 09:59:13] 2025-11-26 14:58:42,072 | INFO     | exitmsg: OK
[2025-11-26 09:59:13] 2025-11-26 14:58:42,072 | INFO     | cpuconsumptiontime: 129211 s
[2025-11-26 09:59:13] 2025-11-26 14:58:42,072 | INFO     | nevents: 1000
[2025-11-26 09:59:13] 2025-11-26 14:58:42,072 | INFO     | neventsw: 0
[2025-11-26 09:59:13] 2025-11-26 14:58:42,072 | INFO     | pid: 31804
[2025-11-26 09:59:13] 2025-11-26 14:58:42,072 | INFO     | pgrp: 31804
[2025-11-26 09:59:13] 2025-11-26 14:58:42,072 | INFO     | corecount: 4
[2025-11-26 09:59:13] 2025-11-26 14:58:42,072 | INFO     | event service: False
[2025-11-26 09:59:13] 2025-11-26 14:58:42,073 | INFO     | sizes: {0: 2284315, 3: 2284577, 11: 2284605, 32782: 2325326, 32783: 2325325, 32786: 2334375, 32787: 2334559, 32791: 2334805}
[2025-11-26 09:59:13] 2025-11-26 14:58:42,073 | INFO     | --------------------------------------------------
[2025-11-26 09:59:13] 2025-11-26 14:58:42,073 | INFO     | 
[2025-11-26 09:59:13] 2025-11-26 14:58:42,073 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 09:59:13] 2025-11-26 14:58:42,083 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 09:59:13] 2025-11-26 14:58:42,084 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 09:59:13] 2025-11-26 14:58:42,084 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 09:59:13] 2025-11-26 14:58:42,084 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 09:59:13] 2025-11-26 14:58:42,084 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 09:59:13] 2025-11-26 14:58:42,084 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 09:59:13] 2025-11-26 14:58:42,084 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 09:59:13] 2025-11-26 14:58:42,084 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 09:59:13] 2025-11-26 14:58:42,084 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 09:59:13] 2025-11-26 14:58:42,084 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 09:59:13] 2025-11-26 14:58:42,084 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 09:59:13] 2025-11-26 14:58:42,084 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 09:59:13] 2025-11-26 14:58:42,084 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 09:59:13] 2025-11-26 14:58:42,084 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 09:59:13] 2025-11-26 14:58:42,084 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 09:59:13] 2025-11-26 14:58:42,084 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 09:59:13] 2025-11-26 14:58:42,084 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 09:59:13] 2025-11-26 14:58:42,084 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 09:59:13] 2025-11-26 14:58:42,084 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 09:59:13] 2025-11-26 14:58:42,085 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 09:59:13] 2025-11-26 14:58:42,085 | INFO     | job 6896243454 has completed (purged errors)
[2025-11-26 09:59:13] 2025-11-26 14:58:42,085 | INFO     | overall cleanup function is called
[2025-11-26 09:59:13] 2025-11-26 14:58:43,093 | INFO     | --- collectZombieJob: --- 10, [31804]
[2025-11-26 09:59:13] 2025-11-26 14:58:43,093 | INFO     | zombie collector waiting for pid 31804
[2025-11-26 09:59:13] 2025-11-26 14:58:43,093 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 09:59:13] 2025-11-26 14:58:43,094 | INFO     | collected zombie processes
[2025-11-26 09:59:13] 2025-11-26 14:58:43,094 | INFO     | will attempt to kill all subprocesses of pid=31804
[2025-11-26 09:59:13] 2025-11-26 14:58:43,125 | INFO     | process IDs to be killed: [31804] (in reverse order)
[2025-11-26 09:59:13] 2025-11-26 14:58:43,147 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 09:59:13] 2025-11-26 14:58:43,147 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 09:59:13] 2025-11-26 14:58:43,148 | INFO     | did not find any defunct processes belonging to 31804
[2025-11-26 09:59:13] 2025-11-26 14:58:43,149 | INFO     | did not find any defunct processes belonging to 31804
[2025-11-26 09:59:13] 2025-11-26 14:58:43,150 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 09:59:13] 2025-11-26 14:58:43,150 | INFO     | ready for new job
[2025-11-26 09:59:13] 2025-11-26 14:58:43,150 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 09:59:13] 2025-11-26 14:58:43,151 | INFO     | ***************************************
[2025-11-26 09:59:13] 2025-11-26 14:58:43,151 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 09:59:13] 2025-11-26 14:58:43,151 | INFO     | ***************************************
[2025-11-26 09:59:13] 2025-11-26 14:58:43,152 | INFO     | 
[2025-11-26 09:59:13] 2025-11-26 14:58:43,152 | INFO     | architecture information:
[2025-11-26 09:59:13] 2025-11-26 14:58:43,152 | INFO     | executing command: cat /etc/os-release
[2025-11-26 09:59:13] 2025-11-26 14:58:43,160 | INFO     | cat /etc/os-release:
[2025-11-26 09:59:13] NAME="CentOS Linux"
[2025-11-26 09:59:13] VERSION="7 (Core)"
[2025-11-26 09:59:13] ID="centos"
[2025-11-26 09:59:13] ID_LIKE="rhel fedora"
[2025-11-26 09:59:13] VERSION_ID="7"
[2025-11-26 09:59:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 09:59:13] ANSI_COLOR="0;31"
[2025-11-26 09:59:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 09:59:13] HOME_URL="https://www.centos.org/"
[2025-11-26 09:59:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 09:59:13] 
[2025-11-26 09:59:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 09:59:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 09:59:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 09:59:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 09:59:13] 
[2025-11-26 09:59:13] 2025-11-26 14:58:43,160 | INFO     | ***************************************
[2025-11-26 09:59:13] 2025-11-26 14:58:43,663 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 09:59:13] 2025-11-26 14:58:43,692 | INFO     | sufficient remaining disk space (28244443136 B)
[2025-11-26 09:59:13] 2025-11-26 14:58:43,692 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 09:59:13] 2025-11-26 14:58:43,692 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 09:59:13] 2025-11-26 14:58:43,693 | INFO     | update_server=False
[2025-11-26 09:59:13] 2025-11-26 14:58:43,693 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 09:59:13] 2025-11-26 14:58:43,693 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:59:13] 2025-11-26 14:58:43,693 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:59:13] 2025-11-26 14:58:43,694 | INFO     | aborting loop
[2025-11-26 09:59:13] 2025-11-26 14:58:43,969 | INFO     | all payload control threads have been joined
[2025-11-26 09:59:13] 2025-11-26 14:58:44,169 | INFO     | all job control threads have been joined
[2025-11-26 09:59:13] 2025-11-26 14:58:44,198 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 09:59:13] 2025-11-26 14:58:44,426 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 09:59:13] 2025-11-26 14:58:44,698 | INFO     | [job] retrieve thread has finished
[2025-11-26 09:59:13] 2025-11-26 14:58:44,699 | INFO     | [job] queue monitor thread has finished
[2025-11-26 09:59:13] 2025-11-26 14:58:44,699 | INFO     | [job] job monitor thread has finished
[2025-11-26 09:59:13] 2025-11-26 14:58:44,704 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 09:59:13] 2025-11-26 14:58:44,707 | INFO     | all data control threads have been joined
[2025-11-26 09:59:13] 2025-11-26 14:58:44,912 | INFO     | [payload] failed_post thread has finished
[2025-11-26 09:59:13] 2025-11-26 14:58:44,935 | INFO     | [job] validate thread has finished
[2025-11-26 09:59:13] 2025-11-26 14:58:44,974 | INFO     | [payload] control thread has finished
[2025-11-26 09:59:13] 2025-11-26 14:58:45,146 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 09:59:13] 2025-11-26 14:58:45,166 | INFO     | [data] copytool_in thread has finished
[2025-11-26 09:59:13] 2025-11-26 14:58:45,172 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 09:59:13] 2025-11-26 14:58:45,174 | INFO     | [job] control thread has finished
[2025-11-26 09:59:13] 2025-11-26 14:58:45,531 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 09:59:13] 2025-11-26 14:58:45,617 | INFO     | [payload] validate_post thread has finished
[2025-11-26 09:59:13] 2025-11-26 14:58:45,712 | INFO     | [data] control thread has finished
[2025-11-26 09:59:13] 2025-11-26 14:58:46,431 | INFO     | [data] copytool_out thread has finished
[2025-11-26 09:59:13] 2025-11-26 14:58:48,204 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 09:59:13] 2025-11-26 14:58:51,349 | INFO     | [monitor] cgroup control has ended
[2025-11-26 09:59:13] 2025-11-26 14:58:51,956 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139806559057728)>', '<ExcThread(monitor, started 139806109574912)>']
[2025-11-26 09:59:13] 2025-11-26 14:58:56,956 | INFO     | all workflow threads have been joined
[2025-11-26 09:59:13] 2025-11-26 14:58:56,966 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 09:59:13] 2025-11-26 14:58:56,967 | INFO     | traces error code: 0
[2025-11-26 09:59:13] 2025-11-26 14:58:56,967 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 09:59:13] 2025-11-26 14:59:13,776 | INFO     | PID=25407 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 09:59:13] 2025-11-26 14:59:13,776 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 09:59:13] 2025-11-26 14:59:13,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 09:59:13] 2025-11-26 14:59:13,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 09:59:13] 2025-11-26 14:59:13,776 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 09:59:13] 2025-11-26 14:59:13,776 | INFO     | [monitor] control thread has ended
[2025-11-26 09:59:13] 2025-11-26 14:59:13,834 [wrapper] ==== pilot stdout END ====
[2025-11-26 09:59:13] 2025-11-26 14:59:13,835 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 09:59:13] 2025-11-26 14:59:13,837 [wrapper] pilotpid: 25407
[2025-11-26 09:59:13] 2025-11-26 14:59:13,839 [wrapper] Pilot exit status: 0
[2025-11-26 09:59:13] 2025-11-26 14:59:13,845 [wrapper] pandaids: 6896243454
[2025-11-26 09:59:13] 2025-11-26 14:59:13,859 [wrapper] cleanup supervisor_pilot 11245 25408
[2025-11-26 09:59:13] 2025-11-26 14:59:13,861 [wrapper] Test setup, not cleaning
[2025-11-26 09:59:13] 2025-11-26 14:59:13,863 [wrapper] apfmon messages muted
[2025-11-26 09:59:13] 2025-11-26 14:59:13,865 [wrapper] ==== wrapper stdout END ====
[2025-11-26 09:59:13] 2025-11-26 14:59:13,867 [wrapper] ==== wrapper stderr END ====
[2025-11-26 09:59:13]  *** Error codes and diagnostics ***
[2025-11-26 09:59:13]     "exeErrorCode": 0,
[2025-11-26 09:59:13]     "exeErrorDiag": "",
[2025-11-26 09:59:13]     "pilotErrorCode": 0,
[2025-11-26 09:59:13]     "pilotErrorDiag": "",
[2025-11-26 09:59:13]  *** Listing of results directory ***
[2025-11-26 09:59:13] total 1317544
[2025-11-26 09:59:13] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 16:08 pilot3.tar.gz
[2025-11-26 09:59:13] -rwx------ 1 boincer umatlas     36292 Nov 24 16:51 runpilot2-wrapper.sh
[2025-11-26 09:59:13] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 16:51 queuedata.json
[2025-11-26 09:59:13] -rw-r--r-- 1 boincer umatlas       100 Nov 26 00:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 09:59:13] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 00:51 run_atlas
[2025-11-26 09:59:13] -rw-r--r-- 1 boincer umatlas       105 Nov 26 00:51 job.xml
[2025-11-26 09:59:13] -rw-r--r-- 2 boincer umatlas 408468477 Nov 26 00:51 EVNT.47483658._001422.pool.root.1
[2025-11-26 09:59:13] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 00:51 start_atlas.sh
[2025-11-26 09:59:13] drwxrwx--x 2 boincer umatlas      4096 Nov 26 00:51 shared
[2025-11-26 09:59:13] -rw-r--r-- 2 boincer umatlas    590102 Nov 26 00:51 input.tar.gz
[2025-11-26 09:59:13] -rw-r--r-- 1 boincer umatlas         0 Nov 26 00:51 boinc_lockfile
[2025-11-26 09:59:13] -rw-r--r-- 1 boincer umatlas      2786 Nov 26 00:51 pandaJob.out
[2025-11-26 09:59:13] -rw------- 1 boincer umatlas        57 Nov 26 00:51 setup.sh.local
[2025-11-26 09:59:13] -rw------- 1 boincer umatlas    991877 Nov 26 00:51 agis_schedconf.cvmfs.json
[2025-11-26 09:59:13] drwx------ 5 boincer umatlas      4096 Nov 26 00:51 pilot3
[2025-11-26 09:59:13] -rw-r--r-- 1 boincer umatlas       532 Nov 26 09:54 boinc_task_state.xml
[2025-11-26 09:59:13] -rw------- 1 boincer umatlas 924956213 Nov 26 09:58 HITS.47556149._004090.pool.root.1
[2025-11-26 09:59:13] -rw------- 1 boincer umatlas        95 Nov 26 09:58 pilot_heartbeat.json
[2025-11-26 09:59:13] -rw------- 1 boincer umatlas      1052 Nov 26 09:58 memory_monitor_summary.json
[2025-11-26 09:59:13] -rw------- 1 boincer umatlas   1516240 Nov 26 09:58 agis_ddmendpoints.agis.ALL.json
[2025-11-26 09:59:13] -rw------- 1 boincer umatlas   1356817 Nov 26 09:58 log.47556149._004090.job.log.tgz.1
[2025-11-26 09:59:13] -rw------- 1 boincer umatlas      8643 Nov 26 09:58 heartbeat.json
[2025-11-26 09:59:13] -rw-r--r-- 1 boincer umatlas      6240 Nov 26 09:58 init_data.xml
[2025-11-26 09:59:13] -rw-r--r-- 1 boincer umatlas        29 Nov 26 09:59 wrapper_checkpoint.txt
[2025-11-26 09:59:13] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 09:59 boinc_mmap_file
[2025-11-26 09:59:13] -rw------- 1 boincer umatlas       745 Nov 26 09:59 pilotlog.txt
[2025-11-26 09:59:13] -rw------- 1 boincer umatlas   4551804 Nov 26 09:59 log.47556149._004090.job.log.1
[2025-11-26 09:59:13] -rw------- 1 boincer umatlas       353 Nov 26 09:59 output.list
[2025-11-26 09:59:13] -rw-r--r-- 1 boincer umatlas       620 Nov 26 09:59 runtime_log
[2025-11-26 09:59:13] -rw------- 1 boincer umatlas   5928960 Nov 26 09:59 result.tar.gz
[2025-11-26 09:59:13] -rw------- 1 boincer umatlas       665 Nov 26 09:59 USyLDmmdth8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmewLKDm0FL67n.diag
[2025-11-26 09:59:13] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 09:59 runtime_log.err
[2025-11-26 09:59:13] -rw-r--r-- 1 boincer umatlas     21324 Nov 26 09:59 stderr.txt
[2025-11-26 09:59:13] HITS file was successfully produced:
[2025-11-26 09:59:13] -rw------- 1 boincer umatlas 924956213 Nov 26 09:58 shared/HITS.pool.root.1
[2025-11-26 09:59:13]  *** Contents of shared directory: ***
[2025-11-26 09:59:13] total 1308572
[2025-11-26 09:59:13] -rw-r--r-- 2 boincer umatlas 408468477 Nov 26 00:51 ATLAS.root_0
[2025-11-26 09:59:13] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 00:51 start_atlas.sh
[2025-11-26 09:59:13] -rw-r--r-- 2 boincer umatlas    590102 Nov 26 00:51 input.tar.gz
[2025-11-26 09:59:13] -rw------- 1 boincer umatlas 924956213 Nov 26 09:58 HITS.pool.root.1
[2025-11-26 09:59:13] -rw------- 1 boincer umatlas   5928960 Nov 26 09:59 result.tar.gz
09:59:15 (21728): run_atlas exited; CPU time 129164.256500
09:59:15 (21728): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN