Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-26 05:53:08 (28188): vboxwrapper version 26210
2025-11-26 05:53:08 (28188): BOINC client version: 8.2.4
2025-11-26 05:53:08 (28188): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-11-26 05:53:08 (28188): Successfully copied 'init_data.xml' to the shared directory.
2025-11-26 05:53:09 (28188): Create VM. (boinc_87d5d380432a48c7, slot#2)
2025-11-26 05:53:09 (28188): Setting Memory Size for VM. (4300MB)
2025-11-26 05:53:09 (28188): Setting CPU Count for VM. (3)
2025-11-26 05:53:10 (28188): Setting Chipset Options for VM.
2025-11-26 05:53:10 (28188): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-26 05:53:10 (28188): Setting Boot Options for VM.
2025-11-26 05:53:11 (28188): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-26 05:53:11 (28188): Enabling VM Network Access.
2025-11-26 05:53:11 (28188): Disabling USB Support for VM.
2025-11-26 05:53:12 (28188): Disabling COM Port Support for VM.
2025-11-26 05:53:12 (28188): Disabling LPT Port Support for VM.
2025-11-26 05:53:12 (28188): Disabling Audio Support for VM.
2025-11-26 05:53:12 (28188): Disabling Clipboard Support for VM.
2025-11-26 05:53:13 (28188): Disabling Drag and Drop Support for VM.
2025-11-26 05:53:13 (28188): Adding storage controller(s) to VM.
2025-11-26 05:53:13 (28188): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-26 05:53:14 (28188): Adding VirtualBox Guest Additions to VM.
2025-11-26 05:53:14 (28188): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-26 05:53:14 (28188): forwarding host port 16274 to guest port 80
2025-11-26 05:53:14 (28188): Enabling remote desktop for VM.
2025-11-26 05:53:15 (28188): Required extension pack not installed, remote desktop not enabled.
2025-11-26 05:53:15 (28188): Enabling shared directory for VM.
2025-11-26 05:53:15 (28188): Starting VM using VBoxManage interface. (boinc_87d5d380432a48c7, slot#2)
2025-11-26 05:53:22 (28188): Successfully started VM. (PID = '24708')
2025-11-26 05:53:22 (28188): Reporting VM Process ID to BOINC.
2025-11-26 05:53:22 (28188): Guest Log: BIOS: VirtualBox 7.0.22
2025-11-26 05:53:22 (28188): Guest Log: CPUID EDX: 0x178bfbff
2025-11-26 05:53:22 (28188): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-26 05:53:22 (28188): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-26 05:53:22 (28188): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-26 05:53:22 (28188): Detected: Web Application Enabled (http://localhost:16274)
2025-11-26 05:53:22 (28188): Preference change detected
2025-11-26 05:53:22 (28188): Setting CPU throttle for VM. (90%)
2025-11-26 05:53:22 (28188): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-26 05:53:24 (28188): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-26 05:53:24 (28188): Guest Log: BIOS: Booting from Hard Disk...
2025-11-26 05:53:28 (28188): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-26 05:53:28 (28188): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-26 05:53:28 (28188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-26 05:53:35 (28188): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-26 05:53:35 (28188): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-26 05:53:45 (28188): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-26 05:53:45 (28188): Guest Log: 00:00:00.000216 main     Log opened 2025-11-26T05:53:42.072284000Z
2025-11-26 05:53:45 (28188): Guest Log: 00:00:00.000390 main     OS Product: Linux
2025-11-26 05:53:45 (28188): Guest Log: 00:00:00.000427 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-26 05:53:45 (28188): Guest Log: 00:00:00.000456 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-26 05:53:45 (28188): Guest Log: 00:00:00.000485 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-26 05:53:45 (28188): Guest Log: 00:00:00.000486 main     Process ID: 1293
2025-11-26 05:53:45 (28188): Guest Log: 00:00:00.000486 main     Package type: LINUX_64BITS_GENERIC
2025-11-26 05:53:45 (28188): Guest Log: 00:00:00.009105 main     5.2.32 r132073 started. Verbose level = 0
2025-11-26 05:53:45 (28188): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-26 05:53:45 (28188): Guest Log: [INFO] Mounting shared directory
2025-11-26 05:53:45 (28188): Guest Log: [INFO] Checking for init_data.xml
2025-11-26 05:54:43 (28188): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-26 05:54:43 (28188): Guest Log: [INFO] Detected branch: prod
2025-11-26 05:54:43 (28188): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-26 05:54:43 (28188): Guest Log: Copying input files
2025-11-26 05:54:49 (28188): Guest Log: Copied input files into RunAtlas.
2025-11-26 05:54:49 (28188): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-26 05:54:49 (28188): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-26 05:54:49 (28188): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-26 05:54:49 (28188): Guest Log: Further information can be found at the LHC@home message board.
2025-11-26 05:54:58 (28188): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-26 05:54:58 (28188): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-26 05:54:58 (28188): Guest Log: 2.6.3.0 1590 0 30156 153311 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-26 05:55:00 (28188): Guest Log: copied the webapp to /var/www
2025-11-26 05:55:00 (28188): Guest Log: ATHENA_PROC_NUMBER=3
2025-11-26 05:55:00 (28188): Guest Log: ATHENA_CORE_NUMBER=3
2025-11-26 05:55:00 (28188): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-26 05:55:00 (28188): Guest Log:  *** Starting ATLAS job. (PandaID=6896764130 taskID=47556185) ***
2025-11-26 07:33:26 (28188): Status Report: Elapsed Time: '6000.000000'
2025-11-26 07:33:26 (28188): Status Report: CPU Time: '14046.500000'
2025-11-26 09:13:32 (28188): Status Report: Elapsed Time: '12000.000000'
2025-11-26 09:13:32 (28188): Status Report: CPU Time: '29660.750000'
2025-11-26 10:53:40 (28188): Status Report: Elapsed Time: '18000.000000'
2025-11-26 10:53:40 (28188): Status Report: CPU Time: '45004.437500'
2025-11-26 12:33:49 (28188): Status Report: Elapsed Time: '24000.000000'
2025-11-26 12:33:49 (28188): Status Report: CPU Time: '60410.578125'
2025-11-26 14:13:56 (28188): Status Report: Elapsed Time: '30000.000000'
2025-11-26 14:13:56 (28188): Status Report: CPU Time: '76022.703125'
2025-11-26 15:54:02 (28188): Status Report: Elapsed Time: '36000.000000'
2025-11-26 15:54:02 (28188): Status Report: CPU Time: '91644.984375'
2025-11-26 17:34:09 (28188): Status Report: Elapsed Time: '42000.000000'
2025-11-26 17:34:09 (28188): Status Report: CPU Time: '107156.890625'
2025-11-26 19:14:16 (28188): Status Report: Elapsed Time: '48000.000000'
2025-11-26 19:14:16 (28188): Status Report: CPU Time: '122730.781250'
2025-11-26 20:54:35 (28188): Status Report: Elapsed Time: '54000.000000'
2025-11-26 20:54:35 (28188): Status Report: CPU Time: '137726.671875'
2025-11-26 22:34:45 (28188): Status Report: Elapsed Time: '60000.000000'
2025-11-26 22:34:45 (28188): Status Report: CPU Time: '153069.343750'
2025-11-27 00:14:56 (28188): Status Report: Elapsed Time: '66000.000000'
2025-11-27 00:14:56 (28188): Status Report: CPU Time: '168115.453125'
2025-11-27 01:55:04 (28188): Status Report: Elapsed Time: '72000.000000'
2025-11-27 01:55:04 (28188): Status Report: CPU Time: '183530.796875'
2025-11-27 03:35:12 (28188): Status Report: Elapsed Time: '78000.000000'
2025-11-27 03:35:12 (28188): Status Report: CPU Time: '198816.500000'
2025-11-27 03:46:48 (28188): Guest Log:  *** Job finished ***
2025-11-27 03:46:48 (28188): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-27 03:46:48 (28188): Guest Log: 2025-11-27 03:46:28,905 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-27 03:46:48 (28188): Guest Log: 2025-11-27 03:46:28,905 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-27 03:46:48 (28188): Guest Log: 2025-11-27 03:46:39,431 | INFO     | [monitor] cgroup control has ended
2025-11-27 03:46:48 (28188): Guest Log: 2025-11-27 03:46:41,874 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140172288747328)>', '<ExcThread(monitor, started 140171978708736)>']
2025-11-27 03:46:48 (28188): Guest Log: 2025-11-27 03:46:41,968 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-27 03:46:48 (28188): Guest Log: 2025-11-27 03:46:41,968 | INFO     | [monitor] control thread has ended
2025-11-27 03:46:48 (28188): Guest Log: 2025-11-27 03:46:46,882 | INFO     | all workflow threads have been joined
2025-11-27 03:46:48 (28188): Guest Log: 2025-11-27 03:46:46,882 | INFO     | end of generic workflow (traces error code: 0)
2025-11-27 03:46:48 (28188): Guest Log: 2025-11-27 03:46:46,882 | INFO     | traces error code: 0
2025-11-27 03:46:48 (28188): Guest Log: 2025-11-27 03:46:46,882 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-27 03:46:48 (28188): Guest Log: 2025-11-27 03:46:47,070 [wrapper] ==== pilot stdout END ====
2025-11-27 03:46:48 (28188): Guest Log: 2025-11-27 03:46:47,082 [wrapper] ==== wrapper stdout RESUME ====
2025-11-27 03:46:48 (28188): Guest Log: 2025-11-27 03:46:47,093 [wrapper] pilotpid: 5973
2025-11-27 03:46:48 (28188): Guest Log: 2025-11-27 03:46:47,109 [wrapper] Pilot exit status: 0
2025-11-27 03:46:48 (28188): Guest Log: 2025-11-27 03:46:47,151 [wrapper] pandaids: 6896764130
2025-11-27 03:46:48 (28188): Guest Log: 2025-11-27 03:46:47,202 [wrapper] cleanup supervisor_pilot 23563 5974
2025-11-27 03:46:48 (28188): Guest Log: 2025-11-27 03:46:47,212 [wrapper] Test setup, not cleaning
2025-11-27 03:46:48 (28188): Guest Log: 2025-11-27 03:46:47,222 [wrapper] apfmon messages muted
2025-11-27 03:46:48 (28188): Guest Log: 2025-11-27 03:46:47,233 [wrapper] ==== wrapper stdout END ====
2025-11-27 03:46:48 (28188): Guest Log: 2025-11-27 03:46:47,250 [wrapper] ==== wrapper stderr END ====
2025-11-27 03:46:48 (28188): Guest Log:  *** Error codes and diagnostics ***
2025-11-27 03:46:48 (28188): Guest Log:     "exeErrorCode": 0,
2025-11-27 03:46:48 (28188): Guest Log:     "exeErrorDiag": "",
2025-11-27 03:46:48 (28188): Guest Log:     "pilotErrorCode": 0,
2025-11-27 03:46:48 (28188): Guest Log:     "pilotErrorDiag": "",
2025-11-27 03:46:48 (28188): Guest Log:  *** Listing of results directory ***
2025-11-27 03:46:48 (28188): Guest Log: total 928464
2025-11-27 03:46:48 (28188): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 25 08:00 pilot3.tar.gz
2025-11-27 03:46:48 (28188): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 25 08:29 runpilot2-wrapper.sh
2025-11-27 03:46:48 (28188): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 25 08:29 queuedata.json
2025-11-27 03:46:48 (28188): Guest Log: -rwxr-xr-x. 1 atlas atlas      8478 Nov 26 05:54 init_data.xml
2025-11-27 03:46:48 (28188): Guest Log: -rwxr-xr-x. 1 atlas atlas    590106 Nov 26 05:54 input.tar.gz
2025-11-27 03:46:48 (28188): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 26 05:54 start_atlas.sh
2025-11-27 03:46:48 (28188): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 26 05:54 EVNT.47483658._004247.pool.root.1 -> /data/./ATLAS.root_0
2025-11-27 03:46:48 (28188): Guest Log: -rw-r--r--. 1 atlas atlas      2784 Nov 26 05:54 pandaJob.out
2025-11-27 03:46:48 (28188): Guest Log: -rw-------. 1 atlas atlas    991877 Nov 26 05:56 agis_schedconf.cvmfs.json
2025-11-27 03:46:48 (28188): Guest Log: drwx------. 5 atlas atlas      4096 Nov 26 05:56 pilot3
2025-11-27 03:46:48 (28188): Guest Log: -rw-------. 1 atlas atlas 922316911 Nov 27 03:45 HITS.47556185._000104.pool.root.1
2025-11-27 03:46:48 (28188): Guest Log: -rw-------. 1 atlas atlas      1031 Nov 27 03:45 memory_monitor_summary.json
2025-11-27 03:46:48 (28188): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 27 03:45 agis_ddmendpoints.agis.ALL.json
2025-11-27 03:46:48 (28188): Guest Log: -rw-------. 1 atlas atlas   1804277 Nov 27 03:45 log.47556185._000104.job.log.tgz.1
2025-11-27 03:46:48 (28188): Guest Log: -rw-------. 1 atlas atlas        95 Nov 27 03:45 pilot_heartbeat.json
2025-11-27 03:46:48 (28188): Guest Log: -rw-------. 1 atlas atlas      8625 Nov 27 03:45 heartbeat.json
2025-11-27 03:46:48 (28188): Guest Log: -rw-------. 1 atlas atlas      4805 Nov 27 03:46 pilotlog.txt
2025-11-27 03:46:48 (28188): Guest Log: -rw-------. 1 atlas atlas  10486975 Nov 27 03:46 log.47556185._000104.job.log.1
2025-11-27 03:46:48 (28188): Guest Log: -rw-------. 1 atlas atlas       353 Nov 27 03:46 output.list
2025-11-27 03:46:48 (28188): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 27 03:46 runtime_log
2025-11-27 03:46:48 (28188): Guest Log: -rw-------. 1 atlas atlas  12308480 Nov 27 03:46 result.tar.gz
2025-11-27 03:46:48 (28188): Guest Log: -rw-r--r--. 1 atlas atlas      8783 Nov 27 03:46 runtime_log.err
2025-11-27 03:46:48 (28188): Guest Log: -rw-------. 1 atlas atlas       675 Nov 27 03:46 8Y3KDmdb3h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVOJKDmJHdSwm.diag
2025-11-27 03:46:48 (28188): Guest Log: Looking for outputfile HITS.47556185._000104.pool.root.1
2025-11-27 03:46:48 (28188): Guest Log: HITS file was successfully produced
2025-11-27 03:46:48 (28188): Guest Log: -rw-------. 1 atlas atlas 922316911 Nov 27 03:45 /home/atlas/RunAtlas/HITS.47556185._000104.pool.root.1
2025-11-27 03:46:56 (28188): Guest Log: Successfully finished the ATLAS job!
2025-11-27 03:46:56 (28188): Guest Log: Copying the results back to the shared directory!
2025-11-27 03:46:56 (28188): Guest Log:  *** Contents of shared directory: ***
2025-11-27 03:46:56 (28188): Guest Log: total 1313068
2025-11-27 03:46:56 (28188): Guest Log: -rwxrwxrwx. 1 root root 409328311 Nov 26 05:53 ATLAS.root_0
2025-11-27 03:46:56 (28188): Guest Log: -rwxrwxrwx. 1 root root 922316911 Nov 27 03:46 HITS.pool.root.1
2025-11-27 03:46:56 (28188): Guest Log: -rwxrwxrwx. 1 root root      8478 Nov 26 05:53 init_data.xml
2025-11-27 03:46:56 (28188): Guest Log: -rwxrwxrwx. 1 root root    590106 Nov 26 05:52 input.tar.gz
2025-11-27 03:46:56 (28188): Guest Log: -rwxrwxrwx. 1 root root  12308480 Nov 27 03:46 result.tar.gz
2025-11-27 03:46:56 (28188): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 26 05:52 start_atlas.sh
2025-11-27 03:46:56 (28188): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-27 03:46:56 (28188): VM Completion File Detected.
2025-11-27 03:46:56 (28188): Powering off VM.
2025-11-27 03:46:58 (28188): Successfully stopped VM.
2025-11-27 03:46:58 (28188): Deregistering VM. (boinc_87d5d380432a48c7, slot#2)
2025-11-27 03:46:58 (28188): Removing network bandwidth throttle group from VM.
2025-11-27 03:46:58 (28188): Removing VM from VirtualBox.
2025-11-27 03:47:03 (28188): called boinc_finish(0)

</stderr_txt>
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