Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
13:00:40 (2725248): wrapper (7.7.26015): starting
13:00:40 (2725248): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 13:00:40] Arguments: --nthreads 12
[2025-11-26 13:00:40] Threads: 12
[2025-11-26 13:00:40] Checking for CVMFS
[2025-11-26 13:00:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 13:00:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 13:00:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 13:00:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 13:00:40] 2.13.3.0 2257978 426 44880 153322 1 81 3625256 4096000 0 130560 0 253508 99.982 18660 2368 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 13:00:40] CVMFS is ok
[2025-11-26 13:00:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 13:00:40] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 13:00:40] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 13:00:40] Further information can be found at the LHC@home message board.
[2025-11-26 13:00:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 13:00:40] Checking for apptainer binary...
[2025-11-26 13:00:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 13:00:40] Running /usr/bin/apptainer --version
[2025-11-26 13:00:40] apptainer version 1.4.4
[2025-11-26 13:00:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 13:00:40] BoincUbuntu
[2025-11-26 13:00:40] apptainer works
[2025-11-26 13:00:40] Set ATHENA_PROC_NUMBER=12
[2025-11-26 13:00:40] Set ATHENA_CORE_NUMBER=12
[2025-11-26 13:00:40] Starting ATLAS job with PandaID=6891571521
[2025-11-26 13:00:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 16:33:25]  *** The last 200 lines of the pilot log: ***
[2025-11-26 16:33:25] 2025-11-26 16:32:53,102 | WARNING  | process 2735900 can no longer be monitored (due to stat problems) - aborting
[2025-11-26 16:33:25] 2025-11-26 16:32:53,102 | INFO     | using path: /var/lib/boinc-client/slots/14/PanDA_Pilot-6891571521/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 16:33:25] 2025-11-26 16:32:53,154 | INFO     | number of running child processes to parent process 2735900: 1
[2025-11-26 16:33:25] 2025-11-26 16:32:53,154 | INFO     | maximum number of monitored processes: 17
[2025-11-26 16:33:25] 2025-11-26 16:32:53,464 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 16:33:25] 2025-11-26 16:32:53,465 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3839.969875
[2025-11-26 16:33:25] 2025-11-26 16:32:53,467 | INFO     | using path: /var/lib/boinc-client/slots/14/PanDA_Pilot-6891571521/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 16:33:25] 2025-11-26 16:32:53,467 | INFO     | extracted standard info from prmon json
[2025-11-26 16:33:25] 2025-11-26 16:32:53,467 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 16:33:25] 2025-11-26 16:32:53,467 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 16:33:25] 2025-11-26 16:32:53,468 | INFO     | fitting pss+swap vs Time
[2025-11-26 16:33:25] 2025-11-26 16:32:53,469 | INFO     | sum of square deviations: 2830732370.7751083
[2025-11-26 16:33:25] 2025-11-26 16:32:53,469 | INFO     | sum of deviations: 85266792482.64127
[2025-11-26 16:33:25] 2025-11-26 16:32:53,469 | INFO     | mean x: 1764168409.7129188
[2025-11-26 16:33:25] 2025-11-26 16:32:53,469 | INFO     | mean y: 3461077.2440191386
[2025-11-26 16:33:25] 2025-11-26 16:32:53,469 | INFO     | intersect: -53136490706.411705
[2025-11-26 16:33:25] 2025-11-26 16:32:53,469 | INFO     | chi2: 3.4630498184455183
[2025-11-26 16:33:25] 2025-11-26 16:32:53,469 | INFO     | sum of square deviations: 2632429908.171566
[2025-11-26 16:33:25] 2025-11-26 16:32:53,470 | INFO     | sum of deviations: 141313662691.9853
[2025-11-26 16:33:25] 2025-11-26 16:32:53,470 | INFO     | mean x: 1764168257.2303922
[2025-11-26 16:33:25] 2025-11-26 16:32:53,470 | INFO     | mean y: 3503818.8088235296
[2025-11-26 16:33:25] 2025-11-26 16:32:53,470 | INFO     | intersect: -94700281934.53069
[2025-11-26 16:33:25] 2025-11-26 16:32:53,470 | INFO     | chi2: 1.522037316994337
[2025-11-26 16:33:25] 2025-11-26 16:32:53,470 | INFO     | current chi2=1.522037316994337 (change=56.049222598895675 %)
[2025-11-26 16:33:25] 2025-11-26 16:32:53,470 | INFO     | sum of square deviations: 2443566465.346748
[2025-11-26 16:33:25] 2025-11-26 16:32:53,471 | INFO     | sum of deviations: 135002070655.34677
[2025-11-26 16:33:25] 2025-11-26 16:32:53,471 | INFO     | mean x: 1764168104.7286432
[2025-11-26 16:33:25] 2025-11-26 16:32:53,471 | INFO     | mean y: 3498721.728643216
[2025-11-26 16:33:25] 2025-11-26 16:32:53,471 | INFO     | intersect: -97463196168.72081
[2025-11-26 16:33:25] 2025-11-26 16:32:53,471 | INFO     | chi2: 1.520241492916146
[2025-11-26 16:33:25] 2025-11-26 16:32:53,471 | INFO     | current chi2=1.520241492916146 (change=0.11798817664584844 %)
[2025-11-26 16:33:25] 2025-11-26 16:32:53,471 | INFO     | right removable region: 198
[2025-11-26 16:33:25] 2025-11-26 16:32:53,471 | INFO     | sum of square deviations: 2632351645.6274595
[2025-11-26 16:33:25] 2025-11-26 16:32:53,471 | INFO     | sum of deviations: 37301763769.11764
[2025-11-26 16:33:25] 2025-11-26 16:32:53,471 | INFO     | mean x: 1764168562.22549
[2025-11-26 16:33:25] 2025-11-26 16:32:53,472 | INFO     | mean y: 3497592.3235294116
[2025-11-26 16:33:25] 2025-11-26 16:32:53,472 | INFO     | intersect: -24995669622.417336
[2025-11-26 16:33:25] 2025-11-26 16:32:53,472 | INFO     | chi2: 2.0005797279397
[2025-11-26 16:33:25] 2025-11-26 16:32:53,472 | INFO     | current chi2=2.0005797279397 (change=42.230697425031174 %)
[2025-11-26 16:33:25] 2025-11-26 16:32:53,472 | INFO     | sum of square deviations: 2443509370.241213
[2025-11-26 16:33:25] 2025-11-26 16:32:53,472 | INFO     | sum of deviations: 29475717402.623108
[2025-11-26 16:33:25] 2025-11-26 16:32:53,472 | INFO     | mean x: 1764168714.718593
[2025-11-26 16:33:25] 2025-11-26 16:32:53,472 | INFO     | mean y: 3503895.9396984926
[2025-11-26 16:33:25] 2025-11-26 16:32:53,472 | INFO     | intersect: -21277420629.6171
[2025-11-26 16:33:25] 2025-11-26 16:32:53,472 | INFO     | chi2: 1.9958317142968072
[2025-11-26 16:33:25] 2025-11-26 16:32:53,472 | INFO     | current chi2=1.9958317142968072 (change=0.23733188818137033 %)
[2025-11-26 16:33:25] 2025-11-26 16:32:53,472 | INFO     | left removable region: 20
[2025-11-26 16:33:25] 2025-11-26 16:32:53,473 | INFO     | sum of square deviations: 1748699814.0898924
[2025-11-26 16:33:25] 2025-11-26 16:32:53,473 | INFO     | sum of deviations: 67016149324.191
[2025-11-26 16:33:25] 2025-11-26 16:32:53,473 | INFO     | mean x: 1764168684.235955
[2025-11-26 16:33:25] 2025-11-26 16:32:53,473 | INFO     | mean y: 3556374.8764044945
[2025-11-26 16:33:25] 2025-11-26 16:32:53,473 | INFO     | intersect: -67605412885.15051
[2025-11-26 16:33:25] 2025-11-26 16:32:53,473 | INFO     | chi2: 0.01442271891060569
[2025-11-26 16:33:25] 2025-11-26 16:32:53,473 | INFO     | current memory leak: 38.32 B/s (using 178 data points, chi2=0.01)
[2025-11-26 16:33:25] 2025-11-26 16:32:53,473 | INFO     | could have reported an average CPU frequency of 3825 MHz (11 samples)
[2025-11-26 16:33:25] 2025-11-26 16:32:53,473 | INFO     | ..............................
[2025-11-26 16:33:25] 2025-11-26 16:32:53,473 | INFO     | . Timing measurements:
[2025-11-26 16:33:25] 2025-11-26 16:32:53,473 | INFO     | . get job = 0 s
[2025-11-26 16:33:25] 2025-11-26 16:32:53,473 | INFO     | . initial setup = 1 s
[2025-11-26 16:33:25] 2025-11-26 16:32:53,473 | INFO     | . payload setup = 3 s
[2025-11-26 16:33:25] 2025-11-26 16:32:53,474 | INFO     | . stage-in = 0 s
[2025-11-26 16:33:25] 2025-11-26 16:32:53,474 | INFO     | . payload execution = 12701 s
[2025-11-26 16:33:25] 2025-11-26 16:32:53,474 | INFO     | . stage-out = 1 s
[2025-11-26 16:33:25] 2025-11-26 16:32:53,474 | INFO     | . log creation = 0 s
[2025-11-26 16:33:25] 2025-11-26 16:32:53,474 | INFO     | ..............................
[2025-11-26 16:33:25] 2025-11-26 16:32:53,505 | INFO     | 
[2025-11-26 16:33:25] 2025-11-26 16:32:53,505 | INFO     | job summary report
[2025-11-26 16:33:25] 2025-11-26 16:32:53,505 | INFO     | --------------------------------------------------
[2025-11-26 16:33:25] 2025-11-26 16:32:53,505 | INFO     | PanDA job id: 6891571521
[2025-11-26 16:33:25] 2025-11-26 16:32:53,505 | INFO     | task id: 47493068
[2025-11-26 16:33:25] 2025-11-26 16:32:53,505 | INFO     | errors: (none)
[2025-11-26 16:33:25] 2025-11-26 16:32:53,505 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 16:33:25] 2025-11-26 16:32:53,505 | INFO     | pilot state: finished 
[2025-11-26 16:33:25] 2025-11-26 16:32:53,505 | INFO     | transexitcode: 0
[2025-11-26 16:33:25] 2025-11-26 16:32:53,505 | INFO     | exeerrorcode: 0
[2025-11-26 16:33:25] 2025-11-26 16:32:53,505 | INFO     | exeerrordiag: 
[2025-11-26 16:33:25] 2025-11-26 16:32:53,505 | INFO     | exitcode: 0
[2025-11-26 16:33:25] 2025-11-26 16:32:53,505 | INFO     | exitmsg: OK
[2025-11-26 16:33:25] 2025-11-26 16:32:53,505 | INFO     | cpuconsumptiontime: 147613 s
[2025-11-26 16:33:25] 2025-11-26 16:32:53,505 | INFO     | nevents: 1000
[2025-11-26 16:33:25] 2025-11-26 16:32:53,505 | INFO     | neventsw: 0
[2025-11-26 16:33:25] 2025-11-26 16:32:53,505 | INFO     | pid: 2735900
[2025-11-26 16:33:25] 2025-11-26 16:32:53,506 | INFO     | pgrp: 2735900
[2025-11-26 16:33:25] 2025-11-26 16:32:53,506 | INFO     | corecount: 12
[2025-11-26 16:33:25] 2025-11-26 16:32:53,506 | INFO     | event service: False
[2025-11-26 16:33:25] 2025-11-26 16:32:53,506 | INFO     | sizes: {0: 2284306, 2: 2284568, 10: 2284596, 12709: 2315641, 12710: 2324651, 12711: 2324707, 12714: 2325081}
[2025-11-26 16:33:25] 2025-11-26 16:32:53,506 | INFO     | --------------------------------------------------
[2025-11-26 16:33:25] 2025-11-26 16:32:53,506 | INFO     | 
[2025-11-26 16:33:25] 2025-11-26 16:32:53,506 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/14
[2025-11-26 16:33:25] 2025-11-26 16:32:53,521 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 16:33:25] 2025-11-26 16:32:53,521 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 16:33:25] 2025-11-26 16:32:53,521 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 16:33:25] 2025-11-26 16:32:53,521 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 16:33:25] 2025-11-26 16:32:53,521 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 16:33:25] 2025-11-26 16:32:53,521 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 16:33:25] 2025-11-26 16:32:53,521 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 16:33:25] 2025-11-26 16:32:53,521 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 16:33:25] 2025-11-26 16:32:53,521 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 16:33:25] 2025-11-26 16:32:53,521 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 16:33:25] 2025-11-26 16:32:53,521 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 16:33:25] 2025-11-26 16:32:53,522 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 16:33:25] 2025-11-26 16:32:53,522 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 16:33:25] 2025-11-26 16:32:53,522 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 16:33:25] 2025-11-26 16:32:53,522 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 16:33:25] 2025-11-26 16:32:53,522 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 16:33:25] 2025-11-26 16:32:53,522 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 16:33:25] 2025-11-26 16:32:53,522 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 16:33:25] 2025-11-26 16:32:53,522 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 16:33:25] 2025-11-26 16:32:53,522 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 16:33:25] 2025-11-26 16:32:53,522 | INFO     | job 6891571521 has completed (purged errors)
[2025-11-26 16:33:25] 2025-11-26 16:32:53,522 | INFO     | overall cleanup function is called
[2025-11-26 16:33:25] 2025-11-26 16:32:54,534 | INFO     | --- collectZombieJob: --- 10, [2735900]
[2025-11-26 16:33:25] 2025-11-26 16:32:54,534 | INFO     | zombie collector waiting for pid 2735900
[2025-11-26 16:33:25] 2025-11-26 16:32:54,534 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 16:33:25] 2025-11-26 16:32:54,534 | INFO     | collected zombie processes
[2025-11-26 16:33:25] 2025-11-26 16:32:54,534 | INFO     | will attempt to kill all subprocesses of pid=2735900
[2025-11-26 16:33:25] 2025-11-26 16:32:54,593 | INFO     | process IDs to be killed: [2735900] (in reverse order)
[2025-11-26 16:33:25] 2025-11-26 16:32:54,617 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 16:33:25] 2025-11-26 16:32:54,617 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 16:33:25] 2025-11-26 16:32:54,619 | INFO     | did not find any defunct processes belonging to 2735900
[2025-11-26 16:33:25] 2025-11-26 16:32:54,620 | INFO     | did not find any defunct processes belonging to 2735900
[2025-11-26 16:33:25] 2025-11-26 16:32:54,622 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 16:33:25] 2025-11-26 16:32:54,622 | INFO     | ready for new job
[2025-11-26 16:33:25] 2025-11-26 16:32:54,622 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 16:33:25] 2025-11-26 16:32:54,623 | INFO     | ***************************************
[2025-11-26 16:33:25] 2025-11-26 16:32:54,623 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 16:33:25] 2025-11-26 16:32:54,623 | INFO     | ***************************************
[2025-11-26 16:33:25] 2025-11-26 16:32:54,623 | INFO     | 
[2025-11-26 16:33:25] 2025-11-26 16:32:54,624 | INFO     | architecture information:
[2025-11-26 16:33:25] 2025-11-26 16:32:54,624 | INFO     | executing command: cat /etc/os-release
[2025-11-26 16:33:25] 2025-11-26 16:32:54,635 | INFO     | cat /etc/os-release:
[2025-11-26 16:33:25] NAME="CentOS Linux"
[2025-11-26 16:33:25] VERSION="7 (Core)"
[2025-11-26 16:33:25] ID="centos"
[2025-11-26 16:33:25] ID_LIKE="rhel fedora"
[2025-11-26 16:33:25] VERSION_ID="7"
[2025-11-26 16:33:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 16:33:25] ANSI_COLOR="0;31"
[2025-11-26 16:33:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 16:33:25] HOME_URL="https://www.centos.org/"
[2025-11-26 16:33:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 16:33:25] 
[2025-11-26 16:33:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 16:33:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 16:33:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 16:33:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 16:33:25] 
[2025-11-26 16:33:25] 2025-11-26 16:32:54,635 | INFO     | ***************************************
[2025-11-26 16:33:25] 2025-11-26 16:32:55,138 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/14
[2025-11-26 16:33:25] 2025-11-26 16:32:55,149 | INFO     | sufficient remaining disk space (337869012992 B)
[2025-11-26 16:33:25] 2025-11-26 16:32:55,149 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 16:33:25] 2025-11-26 16:32:55,149 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 16:33:25] 2025-11-26 16:32:55,149 | INFO     | update_server=False
[2025-11-26 16:33:25] 2025-11-26 16:32:55,149 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 16:33:25] 2025-11-26 16:32:55,149 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:33:25] 2025-11-26 16:32:55,149 | INFO     | aborting loop
[2025-11-26 16:33:25] 2025-11-26 16:32:55,149 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 16:33:25] 2025-11-26 16:32:55,149 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:33:25] 2025-11-26 16:32:55,208 | INFO     | all data control threads have been joined
[2025-11-26 16:33:25] 2025-11-26 16:32:55,871 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 16:33:25] 2025-11-26 16:32:55,911 | INFO     | all job control threads have been joined
[2025-11-26 16:33:25] 2025-11-26 16:32:56,154 | INFO     | [job] job monitor thread has finished
[2025-11-26 16:33:25] 2025-11-26 16:32:56,154 | INFO     | [job] retrieve thread has finished
[2025-11-26 16:33:25] 2025-11-26 16:32:56,154 | INFO     | [job] queue monitor thread has finished
[2025-11-26 16:33:25] 2025-11-26 16:32:56,213 | INFO     | [data] control thread has finished
[2025-11-26 16:33:25] 2025-11-26 16:32:56,249 | INFO     | [payload] failed_post thread has finished
[2025-11-26 16:33:25] 2025-11-26 16:32:56,353 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 16:33:25] 2025-11-26 16:32:56,378 | INFO     | all payload control threads have been joined
[2025-11-26 16:33:25] 2025-11-26 16:32:56,445 | INFO     | [data] copytool_in thread has finished
[2025-11-26 16:33:25] 2025-11-26 16:32:56,576 | INFO     | [job] validate thread has finished
[2025-11-26 16:33:25] 2025-11-26 16:32:56,661 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 16:33:25] 2025-11-26 16:32:56,764 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 16:33:25] 2025-11-26 16:32:56,886 | INFO     | [payload] validate_post thread has finished
[2025-11-26 16:33:25] 2025-11-26 16:32:56,915 | INFO     | [job] control thread has finished
[2025-11-26 16:33:25] 2025-11-26 16:32:57,136 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 16:33:25] 2025-11-26 16:32:57,155 | INFO     | [data] copytool_out thread has finished
[2025-11-26 16:33:25] 2025-11-26 16:32:57,381 | INFO     | [payload] control thread has finished
[2025-11-26 16:33:25] 2025-11-26 16:32:59,876 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 16:33:25] 2025-11-26 16:33:07,235 | INFO     | [monitor] cgroup control has ended
[2025-11-26 16:33:25] 2025-11-26 16:33:07,278 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131302192441152)>', '<ExcThread(monitor, started 131301705246464)>']
[2025-11-26 16:33:25] 2025-11-26 16:33:12,303 | INFO     | all workflow threads have been joined
[2025-11-26 16:33:25] 2025-11-26 16:33:12,303 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 16:33:25] 2025-11-26 16:33:12,304 | INFO     | traces error code: 0
[2025-11-26 16:33:25] 2025-11-26 16:33:12,304 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 16:33:25] 2025-11-26 16:33:25,742 | INFO     | PID=2729095 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 16:33:25] 2025-11-26 16:33:25,742 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 16:33:25] 2025-11-26 16:33:25,742 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 16:33:25] 2025-11-26 16:33:25,742 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 16:33:25] 2025-11-26 16:33:25,742 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 16:33:25] 2025-11-26 16:33:25,742 | INFO     | [monitor] control thread has ended
[2025-11-26 16:33:25] 2025-11-26 16:33:25,809 [wrapper] ==== pilot stdout END ====
[2025-11-26 16:33:25] 2025-11-26 16:33:25,811 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 16:33:25] 2025-11-26 16:33:25,812 [wrapper] pilotpid: 2729095
[2025-11-26 16:33:25] 2025-11-26 16:33:25,814 [wrapper] Pilot exit status: 0
[2025-11-26 16:33:25] 2025-11-26 16:33:25,820 [wrapper] pandaids: 6891571521
[2025-11-26 16:33:25] 2025-11-26 16:33:25,842 [wrapper] cleanup supervisor_pilot 2942033 2729096
[2025-11-26 16:33:25] 2025-11-26 16:33:25,843 [wrapper] Test setup, not cleaning
[2025-11-26 16:33:25] 2025-11-26 16:33:25,845 [wrapper] apfmon messages muted
[2025-11-26 16:33:25] 2025-11-26 16:33:25,846 [wrapper] ==== wrapper stdout END ====
[2025-11-26 16:33:25] 2025-11-26 16:33:25,849 [wrapper] ==== wrapper stderr END ====
[2025-11-26 16:33:25]  *** Error codes and diagnostics ***
[2025-11-26 16:33:25]     "exeErrorCode": 0,
[2025-11-26 16:33:25]     "exeErrorDiag": "",
[2025-11-26 16:33:25]     "pilotErrorCode": 0,
[2025-11-26 16:33:25]     "pilotErrorDiag": "",
[2025-11-26 16:33:25]  *** Listing of results directory ***
[2025-11-26 16:33:25] total 1297932
[2025-11-26 16:33:25] -rw-r--r-- 1 boinc boinc    576529 Nov 18 15:47 pilot3.tar.gz
[2025-11-26 16:33:25] -rw-r--r-- 1 boinc boinc      5112 Nov 18 15:50 queuedata.json
[2025-11-26 16:33:25] -rwx------ 1 boinc boinc     36292 Nov 18 15:50 runpilot2-wrapper.sh
[2025-11-26 16:33:25] -rw-r--r-- 1 boinc boinc       100 Nov 26 13:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 16:33:25] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 13:00 run_atlas
[2025-11-26 16:33:25] -rw-r--r-- 1 boinc boinc       105 Nov 26 13:00 job.xml
[2025-11-26 16:33:25] -rw-r--r-- 2 boinc boinc 407383515 Nov 26 13:00 EVNT.47493065._000286.pool.root.1
[2025-11-26 16:33:25] -rw-r--r-- 1 boinc boinc      9657 Nov 26 13:00 init_data.xml
[2025-11-26 16:33:25] drwxrwx--x 2 boinc boinc      4096 Nov 26 13:00 shared
[2025-11-26 16:33:25] -rw-r--r-- 2 boinc boinc    590100 Nov 26 13:00 input.tar.gz
[2025-11-26 16:33:25] -rw-r--r-- 2 boinc boinc     15120 Nov 26 13:00 start_atlas.sh
[2025-11-26 16:33:25] -rw-r--r-- 1 boinc boinc         0 Nov 26 13:00 boinc_lockfile
[2025-11-26 16:33:25] -rw-r--r-- 1 boinc boinc      2770 Nov 26 13:00 pandaJob.out
[2025-11-26 16:33:25] -rw------- 1 boinc boinc    991830 Nov 26 13:00 agis_schedconf.cvmfs.json
[2025-11-26 16:33:25] drwx------ 5 boinc boinc      4096 Nov 26 13:00 pilot3
[2025-11-26 16:33:25] -rw-r--r-- 1 boinc boinc       532 Nov 26 16:27 boinc_task_state.xml
[2025-11-26 16:33:25] -rw------- 1 boinc boinc 910202581 Nov 26 16:32 HITS.47493068._002851.pool.root.1
[2025-11-26 16:33:25] -rw------- 1 boinc boinc        95 Nov 26 16:32 pilot_heartbeat.json
[2025-11-26 16:33:25] -rw------- 1 boinc boinc      1030 Nov 26 16:32 memory_monitor_summary.json
[2025-11-26 16:33:25] -rw------- 1 boinc boinc   1516240 Nov 26 16:32 agis_ddmendpoints.agis.ALL.json
[2025-11-26 16:33:25] -rw------- 1 boinc boinc   1956677 Nov 26 16:32 log.47493068._002851.job.log.tgz.1
[2025-11-26 16:33:25] -rw------- 1 boinc boinc      8575 Nov 26 16:32 heartbeat.json
[2025-11-26 16:33:25] -rw-r--r-- 1 boinc boinc      8192 Nov 26 16:32 boinc_mmap_file
[2025-11-26 16:33:25] -rw-r--r-- 1 boinc boinc        29 Nov 26 16:33 wrapper_checkpoint.txt
[2025-11-26 16:33:25] -rw------- 1 boinc boinc       747 Nov 26 16:33 pilotlog.txt
[2025-11-26 16:33:25] -rw------- 1 boinc boinc   1831242 Nov 26 16:33 log.47493068._002851.job.log.1
[2025-11-26 16:33:25] -rw------- 1 boinc boinc       353 Nov 26 16:33 output.list
[2025-11-26 16:33:25] -rw-r--r-- 1 boinc boinc       620 Nov 26 16:33 runtime_log
[2025-11-26 16:33:25] -rw------- 1 boinc boinc   3809280 Nov 26 16:33 result.tar.gz
[2025-11-26 16:33:25] -rw-r--r-- 1 boinc boinc      8798 Nov 26 16:33 runtime_log.err
[2025-11-26 16:33:25] -rw------- 1 boinc boinc       658 Nov 26 16:33 9YuMDme9cf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuPFKDmRjdcHm.diag
[2025-11-26 16:33:25] -rw-r--r-- 1 boinc boinc     21446 Nov 26 16:33 stderr.txt
[2025-11-26 16:33:25] HITS file was successfully produced:
[2025-11-26 16:33:25] -rw------- 1 boinc boinc 910202581 Nov 26 16:32 shared/HITS.pool.root.1
[2025-11-26 16:33:25]  *** Contents of shared directory: ***
[2025-11-26 16:33:25] total 1291032
[2025-11-26 16:33:25] -rw-r--r-- 2 boinc boinc 407383515 Nov 26 13:00 ATLAS.root_0
[2025-11-26 16:33:25] -rw-r--r-- 2 boinc boinc    590100 Nov 26 13:00 input.tar.gz
[2025-11-26 16:33:25] -rw-r--r-- 2 boinc boinc     15120 Nov 26 13:00 start_atlas.sh
[2025-11-26 16:33:25] -rw------- 1 boinc boinc 910202581 Nov 26 16:32 HITS.pool.root.1
[2025-11-26 16:33:25] -rw------- 1 boinc boinc   3809280 Nov 26 16:33 result.tar.gz
16:33:27 (2725248): run_atlas exited; CPU time 147308.390406
16:33:27 (2725248): called boinc_finish(0)

</stderr_txt>
]]>

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