Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:41:50 (5014): wrapper (7.7.26015): starting
00:41:50 (5014): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:41:50] Arguments: --nthreads 8
[2025-11-26 00:41:50] Threads: 8
[2025-11-26 00:41:50] Checking for CVMFS
[2025-11-26 00:41:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:41:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:41:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:41:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:41:50] 2.11.2.0 4697 117258 136048 153311 0 90 16168722 18432001 1692 130560 0 83952018 99.974 4985586 32192 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:41:50] CVMFS is ok
[2025-11-26 00:41:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:41:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:41:50] Further information can be found at the LHC@home message board.
[2025-11-26 00:41:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:41:50] Checking for apptainer binary...
[2025-11-26 00:41:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:41:50] Running /usr/bin/apptainer --version
[2025-11-26 00:41:50] apptainer version 1.3.2-1.el7
[2025-11-26 00:41:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:41:51] c-206-21.aglt2.org
[2025-11-26 00:41:51] apptainer works
[2025-11-26 00:41:51] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:41:51] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:41:51] Starting ATLAS job with PandaID=6891571202
[2025-11-26 00:41:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:49:40 (10892): wrapper (7.7.26015): starting
10:49:40 (10892): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 10:49:40] Arguments: --nthreads 8
[2025-11-26 10:49:40] Threads: 8
[2025-11-26 10:49:40] This job has been restarted, cleaning up previous attempt
[2025-11-26 10:49:40] Checking for CVMFS
[2025-11-26 10:49:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 10:49:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 10:49:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 10:49:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 10:49:40] 2.11.2.0 4697 117866 127336 153326 1 57 16323849 18432001 1 130560 0 84423792 99.974 5006516 32206 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 10:49:40] CVMFS is ok
[2025-11-26 10:49:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 10:49:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 10:49:40] Further information can be found at the LHC@home message board.
[2025-11-26 10:49:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 10:49:40] Checking for apptainer binary...
[2025-11-26 10:49:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 10:49:40] Running /usr/bin/apptainer --version
[2025-11-26 10:49:40] apptainer version 1.3.2-1.el7
[2025-11-26 10:49:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 10:49:42] c-206-21.aglt2.org
[2025-11-26 10:49:42] apptainer works
[2025-11-26 10:49:42] Set ATHENA_PROC_NUMBER=8
[2025-11-26 10:49:42] Set ATHENA_CORE_NUMBER=8
[2025-11-26 10:49:42] Starting ATLAS job with PandaID=6891571202
[2025-11-26 10:49:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:20:04 (10892): BOINC client no longer exists - exiting
22:20:04 (10892): timer handler: client dead, exiting
22:28:27 (26405): wrapper (7.7.26015): starting
22:28:27 (26405): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 22:28:27] Arguments: --nthreads 8
[2025-11-26 22:28:27] Threads: 8
[2025-11-26 22:28:27] This job has been restarted, cleaning up previous attempt
[2025-11-26 22:28:27] Checking for CVMFS
[2025-11-26 22:28:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 22:28:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 22:28:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 22:28:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 22:28:27] 2.11.2.0 4697 118565 130524 153345 3 49 16457462 18432001 1 130560 0 85081077 99.974 5031548 32221 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 22:28:27] CVMFS is ok
[2025-11-26 22:28:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 22:28:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 22:28:27] Further information can be found at the LHC@home message board.
[2025-11-26 22:28:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 22:28:27] Checking for apptainer binary...
[2025-11-26 22:28:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 22:28:27] Running /usr/bin/apptainer --version
[2025-11-26 22:28:27] apptainer version 1.3.2-1.el7
[2025-11-26 22:28:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 22:28:28] c-206-21.aglt2.org
[2025-11-26 22:28:28] apptainer works
[2025-11-26 22:28:28] Set ATHENA_PROC_NUMBER=8
[2025-11-26 22:28:28] Set ATHENA_CORE_NUMBER=8
[2025-11-26 22:28:28] Starting ATLAS job with PandaID=6891571202
[2025-11-26 22:28:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:52:44]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:52:44] 2025-11-27 22:51:52,048 | INFO     | time since job start (69790s) is within the limit (172800.0s)
[2025-11-27 17:52:44] 2025-11-27 22:51:53,374 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 17:52:44] 2025-11-27 22:51:53,378 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2455.75
[2025-11-27 17:52:44] 2025-11-27 22:51:53,381 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6891571202/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 17:52:44] 2025-11-27 22:51:53,382 | INFO     | extracted standard info from prmon json
[2025-11-27 17:52:44] 2025-11-27 22:51:53,382 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 17:52:44] 2025-11-27 22:51:53,382 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 17:52:44] 2025-11-27 22:51:53,397 | INFO     | fitting pss+swap vs Time
[2025-11-27 17:52:44] 2025-11-27 22:51:53,398 | INFO     | sum of square deviations: 464254248237.4517
[2025-11-27 17:52:44] 2025-11-27 22:51:53,431 | INFO     | sum of deviations: 2370189575550.7173
[2025-11-27 17:52:44] 2025-11-27 22:51:53,431 | INFO     | mean x: 1764249010.3164337
[2025-11-27 17:52:44] 2025-11-27 22:51:53,432 | INFO     | mean y: 2864680.951048951
[2025-11-27 17:52:44] 2025-11-27 22:51:53,432 | INFO     | intersect: -9004278772.885303
[2025-11-27 17:52:44] 2025-11-27 22:51:53,434 | INFO     | chi2: 5.235725729046918
[2025-11-27 17:52:44] 2025-11-27 22:51:53,435 | INFO     | sum of square deviations: 458193842724.1034
[2025-11-27 17:52:44] 2025-11-27 22:51:53,477 | INFO     | sum of deviations: 2716509081395.3174
[2025-11-27 17:52:44] 2025-11-27 22:51:53,478 | INFO     | mean x: 1764248857.8200176
[2025-11-27 17:52:44] 2025-11-27 22:51:53,478 | INFO     | mean y: 2873390.1527655837
[2025-11-27 17:52:44] 2025-11-27 22:51:53,478 | INFO     | intersect: -10456887517.18707
[2025-11-27 17:52:44] 2025-11-27 22:51:53,480 | INFO     | chi2: 2.431503180258994
[2025-11-27 17:52:44] 2025-11-27 22:51:53,480 | INFO     | current chi2=2.431503180258994 (change=53.55938591722964 %)
[2025-11-27 17:52:44] 2025-11-27 22:51:53,482 | INFO     | sum of square deviations: 452186276357.51764
[2025-11-27 17:52:44] 2025-11-27 22:51:53,524 | INFO     | sum of deviations: 2766892071623.762
[2025-11-27 17:52:44] 2025-11-27 22:51:53,524 | INFO     | mean x: 1764248705.3218694
[2025-11-27 17:52:44] 2025-11-27 22:51:53,524 | INFO     | mean y: 2874666.545855379
[2025-11-27 17:52:44] 2025-11-27 22:51:53,524 | INFO     | intersect: -10792423665.922903
[2025-11-27 17:52:44] 2025-11-27 22:51:53,526 | INFO     | chi2: 2.2692386930310597
[2025-11-27 17:52:44] 2025-11-27 22:51:53,526 | INFO     | current chi2=2.2692386930310597 (change=6.673422784117052 %)
[2025-11-27 17:52:44] 2025-11-27 22:51:53,526 | INFO     | right removable region: 1133
[2025-11-27 17:52:44] 2025-11-27 22:51:53,528 | INFO     | sum of square deviations: 458193272984.10315
[2025-11-27 17:52:44] 2025-11-27 22:51:53,563 | INFO     | sum of deviations: 2092172448833.6853
[2025-11-27 17:52:44] 2025-11-27 22:51:53,563 | INFO     | mean x: 1764249162.8200176
[2025-11-27 17:52:44] 2025-11-27 22:51:53,564 | INFO     | mean y: 2871666.7594381035
[2025-11-27 17:52:44] 2025-11-27 22:51:53,564 | INFO     | intersect: -8052928601.303417
[2025-11-27 17:52:44] 2025-11-27 22:51:53,565 | INFO     | chi2: 3.2945120493838305
[2025-11-27 17:52:44] 2025-11-27 22:51:53,565 | INFO     | current chi2=3.2945120493838305 (change=37.07630575248745 %)
[2025-11-27 17:52:44] 2025-11-27 22:51:53,566 | INFO     | sum of square deviations: 452185622866.4408
[2025-11-27 17:52:44] 2025-11-27 22:51:53,588 | INFO     | sum of deviations: 2001403936569.7202
[2025-11-27 17:52:44] 2025-11-27 22:51:53,589 | INFO     | mean x: 1764249315.3192239
[2025-11-27 17:52:44] 2025-11-27 22:51:53,589 | INFO     | mean y: 2873970.544973545
[2025-11-27 17:52:44] 2025-11-27 22:51:53,589 | INFO     | intersect: -7805811989.85154
[2025-11-27 17:52:44] 2025-11-27 22:51:53,590 | INFO     | chi2: 3.210135321006969
[2025-11-27 17:52:44] 2025-11-27 22:51:53,590 | INFO     | current chi2=3.210135321006969 (change=2.5611297549402554 %)
[2025-11-27 17:52:44] 2025-11-27 22:51:53,590 | INFO     | left removable region: 20
[2025-11-27 17:52:44] 2025-11-27 22:51:53,591 | INFO     | sum of square deviations: 427526967213.4835
[2025-11-27 17:52:44] 2025-11-27 22:51:53,619 | INFO     | sum of deviations: 2263641003514.216
[2025-11-27 17:52:44] 2025-11-27 22:51:53,619 | INFO     | mean x: 1764249284.8238993
[2025-11-27 17:52:44] 2025-11-27 22:51:53,619 | INFO     | mean y: 2887411.0521114105
[2025-11-27 17:52:44] 2025-11-27 22:51:53,619 | INFO     | intersect: -9338340927.308615
[2025-11-27 17:52:44] 2025-11-27 22:51:53,620 | INFO     | chi2: 0.17757859148564856
[2025-11-27 17:52:44] 2025-11-27 22:51:53,620 | INFO     | current memory leak: 5.29 B/s (using 1113 data points, chi2=0.18)
[2025-11-27 17:52:44] 2025-11-27 22:51:53,621 | INFO     | could have reported an average CPU frequency of 2583 MHz (41 samples)
[2025-11-27 17:52:44] 2025-11-27 22:51:53,621 | INFO     | ..............................
[2025-11-27 17:52:44] 2025-11-27 22:51:53,621 | INFO     | . Timing measurements:
[2025-11-27 17:52:44] 2025-11-27 22:51:53,621 | INFO     | . get job = 0 s
[2025-11-27 17:52:44] 2025-11-27 22:51:53,621 | INFO     | . initial setup = 2 s
[2025-11-27 17:52:44] 2025-11-27 22:51:53,622 | INFO     | . payload setup = 6 s
[2025-11-27 17:52:44] 2025-11-27 22:51:53,622 | INFO     | . stage-in = 0 s
[2025-11-27 17:52:44] 2025-11-27 22:51:53,622 | INFO     | . payload execution = 69755 s
[2025-11-27 17:52:44] 2025-11-27 22:51:53,622 | INFO     | . stage-out = 4 s
[2025-11-27 17:52:44] 2025-11-27 22:51:53,622 | INFO     | . log creation = 0 s
[2025-11-27 17:52:44] 2025-11-27 22:51:53,622 | INFO     | ..............................
[2025-11-27 17:52:44] 2025-11-27 22:51:53,960 | INFO     | 
[2025-11-27 17:52:44] 2025-11-27 22:51:53,960 | INFO     | job summary report
[2025-11-27 17:52:44] 2025-11-27 22:51:53,961 | INFO     | --------------------------------------------------
[2025-11-27 17:52:44] 2025-11-27 22:51:53,961 | INFO     | PanDA job id: 6891571202
[2025-11-27 17:52:44] 2025-11-27 22:51:53,961 | INFO     | task id: 47493068
[2025-11-27 17:52:44] 2025-11-27 22:51:53,961 | INFO     | errors: (none)
[2025-11-27 17:52:44] 2025-11-27 22:51:53,961 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:52:44] 2025-11-27 22:51:53,961 | INFO     | pilot state: finished 
[2025-11-27 17:52:44] 2025-11-27 22:51:53,962 | INFO     | transexitcode: 0
[2025-11-27 17:52:44] 2025-11-27 22:51:53,962 | INFO     | exeerrorcode: 0
[2025-11-27 17:52:44] 2025-11-27 22:51:53,962 | INFO     | exeerrordiag: 
[2025-11-27 17:52:44] 2025-11-27 22:51:53,962 | INFO     | exitcode: 0
[2025-11-27 17:52:44] 2025-11-27 22:51:53,962 | INFO     | exitmsg: OK
[2025-11-27 17:52:44] 2025-11-27 22:51:53,962 | INFO     | cpuconsumptiontime: 541343 s
[2025-11-27 17:52:44] 2025-11-27 22:51:53,963 | INFO     | nevents: 1000
[2025-11-27 17:52:44] 2025-11-27 22:51:53,963 | INFO     | neventsw: 0
[2025-11-27 17:52:44] 2025-11-27 22:51:53,963 | INFO     | pid: 26500
[2025-11-27 17:52:44] 2025-11-27 22:51:53,963 | INFO     | pgrp: 26500
[2025-11-27 17:52:44] 2025-11-27 22:51:53,963 | INFO     | corecount: 8
[2025-11-27 17:52:44] 2025-11-27 22:51:53,963 | INFO     | event service: False
[2025-11-27 17:52:44] 2025-11-27 22:51:53,964 | INFO     | sizes: {0: 2284133, 1: 2284332, 5: 2284594, 11: 2284650, 69765: 2340897, 69770: 2350075, 69776: 2350361}
[2025-11-27 17:52:44] 2025-11-27 22:51:53,964 | INFO     | --------------------------------------------------
[2025-11-27 17:52:44] 2025-11-27 22:51:53,964 | INFO     | 
[2025-11-27 17:52:44] 2025-11-27 22:51:53,964 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 17:52:44] 2025-11-27 22:51:53,982 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:52:44] 2025-11-27 22:51:53,982 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:52:44] 2025-11-27 22:51:53,983 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:52:44] 2025-11-27 22:51:53,983 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:52:44] 2025-11-27 22:51:53,983 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:52:44] 2025-11-27 22:51:53,983 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:52:44] 2025-11-27 22:51:53,983 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:52:44] 2025-11-27 22:51:53,984 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:52:44] 2025-11-27 22:51:53,984 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:52:44] 2025-11-27 22:51:53,984 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:52:44] 2025-11-27 22:51:53,984 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:52:44] 2025-11-27 22:51:53,984 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:52:44] 2025-11-27 22:51:53,984 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:52:44] 2025-11-27 22:51:53,985 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:52:44] 2025-11-27 22:51:53,985 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:52:44] 2025-11-27 22:51:53,985 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:52:44] 2025-11-27 22:51:53,985 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:52:44] 2025-11-27 22:51:53,985 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:52:44] 2025-11-27 22:51:53,985 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:52:44] 2025-11-27 22:51:53,986 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:52:44] 2025-11-27 22:51:53,986 | INFO     | job 6891571202 has completed (purged errors)
[2025-11-27 17:52:44] 2025-11-27 22:51:53,986 | INFO     | overall cleanup function is called
[2025-11-27 17:52:44] 2025-11-27 22:51:55,002 | INFO     | --- collectZombieJob: --- 10, [26500]
[2025-11-27 17:52:44] 2025-11-27 22:51:55,003 | INFO     | zombie collector waiting for pid 26500
[2025-11-27 17:52:44] 2025-11-27 22:51:55,003 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:52:44] 2025-11-27 22:51:55,003 | INFO     | collected zombie processes
[2025-11-27 17:52:44] 2025-11-27 22:51:55,003 | INFO     | will attempt to kill all subprocesses of pid=26500
[2025-11-27 17:52:44] 2025-11-27 22:51:55,166 | INFO     | process IDs to be killed: [26500] (in reverse order)
[2025-11-27 17:52:44] 2025-11-27 22:51:55,227 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:52:44] 2025-11-27 22:51:55,227 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:52:44] 2025-11-27 22:51:55,233 | INFO     | did not find any defunct processes belonging to 26500
[2025-11-27 17:52:44] 2025-11-27 22:51:55,239 | INFO     | did not find any defunct processes belonging to 26500
[2025-11-27 17:52:44] 2025-11-27 22:51:55,241 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:52:44] 2025-11-27 22:51:55,241 | INFO     | ready for new job
[2025-11-27 17:52:44] 2025-11-27 22:51:55,241 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:52:44] 2025-11-27 22:51:55,246 | INFO     | ***************************************
[2025-11-27 17:52:44] 2025-11-27 22:51:55,246 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:52:44] 2025-11-27 22:51:55,246 | INFO     | ***************************************
[2025-11-27 17:52:44] 2025-11-27 22:51:55,246 | INFO     | 
[2025-11-27 17:52:44] 2025-11-27 22:51:55,248 | INFO     | architecture information:
[2025-11-27 17:52:44] 2025-11-27 22:51:55,248 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:52:44] 2025-11-27 22:51:55,269 | INFO     | cat /etc/os-release:
[2025-11-27 17:52:44] NAME="CentOS Linux"
[2025-11-27 17:52:44] VERSION="7 (Core)"
[2025-11-27 17:52:44] ID="centos"
[2025-11-27 17:52:44] ID_LIKE="rhel fedora"
[2025-11-27 17:52:44] VERSION_ID="7"
[2025-11-27 17:52:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:52:44] ANSI_COLOR="0;31"
[2025-11-27 17:52:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:52:44] HOME_URL="https://www.centos.org/"
[2025-11-27 17:52:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:52:44] 
[2025-11-27 17:52:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:52:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:52:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:52:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:52:44] 
[2025-11-27 17:52:44] 2025-11-27 22:51:55,270 | INFO     | ***************************************
[2025-11-27 17:52:44] 2025-11-27 22:51:55,773 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 17:52:44] 2025-11-27 22:51:55,789 | INFO     | sufficient remaining disk space (24662507520 B)
[2025-11-27 17:52:44] 2025-11-27 22:51:55,789 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:52:44] 2025-11-27 22:51:55,789 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:52:44] 2025-11-27 22:51:55,789 | INFO     | update_server=False
[2025-11-27 17:52:44] 2025-11-27 22:51:55,790 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:52:44] 2025-11-27 22:51:55,793 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:52:44] 2025-11-27 22:51:55,910 | INFO     | all data control threads have been joined
[2025-11-27 17:52:44] 2025-11-27 22:51:56,180 | INFO     | all job control threads have been joined
[2025-11-27 17:52:44] 2025-11-27 22:51:56,218 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 17:52:44] 2025-11-27 22:51:56,219 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 17:52:44] 2025-11-27 22:51:56,219 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:52:44] 2025-11-27 22:51:56,219 | INFO     | will abort loop
[2025-11-27 17:52:44] 2025-11-27 22:51:56,337 | INFO     | all payload control threads have been joined
[2025-11-27 17:52:44] 2025-11-27 22:51:56,791 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:52:44] 2025-11-27 22:51:56,803 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:52:44] 2025-11-27 22:51:56,890 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:52:44] 2025-11-27 22:51:56,916 | INFO     | [data] control thread has finished
[2025-11-27 17:52:44] 2025-11-27 22:51:57,027 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:52:44] 2025-11-27 22:51:57,185 | INFO     | [job] control thread has finished
[2025-11-27 17:52:44] 2025-11-27 22:51:57,194 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:52:44] 2025-11-27 22:51:57,195 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:52:44] 2025-11-27 22:51:57,206 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:52:44] 2025-11-27 22:51:57,227 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:52:44] 2025-11-27 22:51:57,343 | INFO     | [payload] control thread has finished
[2025-11-27 17:52:44] 2025-11-27 22:51:57,396 | INFO     | [job] validate thread has finished
[2025-11-27 17:52:44] 2025-11-27 22:51:57,800 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:52:44] 2025-11-27 22:51:58,098 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:52:44] 2025-11-27 22:51:58,452 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:52:44] 2025-11-27 22:51:58,722 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:52:44] 2025-11-27 22:51:59,728 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:52:44] 2025-11-27 22:52:02,463 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:52:44] 2025-11-27 22:52:25,315 | INFO     | PID=5541 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 17:52:44] 2025-11-27 22:52:25,315 | INFO     | .. there are 3 such processes running
[2025-11-27 17:52:44] 2025-11-27 22:52:25,316 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:52:44] 2025-11-27 22:52:25,316 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:52:44] 2025-11-27 22:52:25,316 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:52:44] 2025-11-27 22:52:37,255 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:52:44] 2025-11-27 22:52:38,764 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140217168766784)>', '<ExcThread(monitor, started 140216522241792)>']
[2025-11-27 17:52:44] 2025-11-27 22:52:39,383 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:52:44] 2025-11-27 22:52:39,384 | INFO     | [monitor] control thread has ended
[2025-11-27 17:52:44] 2025-11-27 22:52:43,788 | INFO     | all workflow threads have been joined
[2025-11-27 17:52:44] 2025-11-27 22:52:43,789 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:52:44] 2025-11-27 22:52:43,789 | INFO     | traces error code: 0
[2025-11-27 17:52:44] 2025-11-27 22:52:43,789 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:52:44] 2025-11-27 22:52:43,913 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:52:44] 2025-11-27 22:52:43,915 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:52:44] 2025-11-27 22:52:43,918 [wrapper] pilotpid: 5541
[2025-11-27 17:52:44] 2025-11-27 22:52:43,920 [wrapper] Pilot exit status: 0
[2025-11-27 17:52:44] 2025-11-27 22:52:43,928 [wrapper] pandaids: 6891571202 6891571202 6891571202
[2025-11-27 17:52:44] 2025-11-27 22:52:43,973 [wrapper] cleanup supervisor_pilot 26045 5543
[2025-11-27 17:52:44] 2025-11-27 22:52:43,976 [wrapper] Test setup, not cleaning
[2025-11-27 17:52:44] 2025-11-27 22:52:43,978 [wrapper] apfmon messages muted
[2025-11-27 17:52:44] 2025-11-27 22:52:43,986 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:52:44] 2025-11-27 22:52:43,989 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:52:44]  *** Error codes and diagnostics ***
[2025-11-27 17:52:44]     "exeErrorCode": 0,
[2025-11-27 17:52:44]     "exeErrorDiag": "",
[2025-11-27 17:52:44]     "pilotErrorCode": 0,
[2025-11-27 17:52:44]     "pilotErrorDiag": "",
[2025-11-27 17:52:44]  *** Listing of results directory ***
[2025-11-27 17:52:44] total 1722356
[2025-11-27 17:52:44] drwx------ 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-27 17:52:44] -rw-r--r-- 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-27 17:52:44] -rw-r--r-- 1 boincer umatlas      5112 Nov 18 10:45 queuedata.json
[2025-11-27 17:52:44] -rwx------ 1 boincer umatlas     36292 Nov 18 10:45 runpilot2-wrapper.sh
[2025-11-27 17:52:44] -rw-r--r-- 1 boincer umatlas       100 Nov 26 00:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:52:44] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 00:41 run_atlas
[2025-11-27 17:52:44] -rw-r--r-- 1 boincer umatlas       105 Nov 26 00:41 job.xml
[2025-11-27 17:52:44] -rw-r--r-- 3 boincer umatlas 410189704 Nov 26 00:41 EVNT.47493065._000273.pool.root.1
[2025-11-27 17:52:44] -rw-r--r-- 3 boincer umatlas 410189704 Nov 26 00:41 ATLAS.root_0
[2025-11-27 17:52:44] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 00:41 start_atlas.sh
[2025-11-27 17:52:44] drwxrwx--x 2 boincer umatlas      4096 Nov 26 00:41 shared
[2025-11-27 17:52:44] -rw-r--r-- 2 boincer umatlas    590103 Nov 26 00:41 input.tar.gz
[2025-11-27 17:52:44] -rw-r--r-- 1 boincer umatlas         0 Nov 26 00:41 boinc_lockfile
[2025-11-27 17:52:44] -rw-r--r-- 1 boincer umatlas      2773 Nov 26 22:28 pandaJob.out
[2025-11-27 17:52:44] -rw------- 1 boincer umatlas    991546 Nov 26 22:28 agis_schedconf.cvmfs.json
[2025-11-27 17:52:44] -rw-r--r-- 1 boincer umatlas       535 Nov 27 17:41 boinc_task_state.xml
[2025-11-27 17:52:44] -rw-r--r-- 1 boincer umatlas      5956 Nov 27 17:45 init_data.xml
[2025-11-27 17:52:44] -rw------- 1 boincer umatlas 915506355 Nov 27 17:51 HITS.47493068._002727.pool.root.1
[2025-11-27 17:52:44] -rw------- 1 boincer umatlas      1062 Nov 27 17:51 memory_monitor_summary.json
[2025-11-27 17:52:44] -rw------- 1 boincer umatlas   1516240 Nov 27 17:51 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:52:44] -rw------- 1 boincer umatlas   2304861 Nov 27 17:51 log.47493068._002727.job.log.tgz.1
[2025-11-27 17:52:44] -rw------- 1 boincer umatlas        96 Nov 27 17:51 pilot_heartbeat.json
[2025-11-27 17:52:44] -rw------- 1 boincer umatlas      8666 Nov 27 17:51 heartbeat.json
[2025-11-27 17:52:44] -rw-r--r-- 1 boincer umatlas        31 Nov 27 17:52 wrapper_checkpoint.txt
[2025-11-27 17:52:44] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 17:52 boinc_mmap_file
[2025-11-27 17:52:44] -rw------- 1 boincer umatlas      5006 Nov 27 17:52 pilotlog.txt
[2025-11-27 17:52:44] -rw------- 1 boincer umatlas   9635965 Nov 27 17:52 log.47493068._002727.job.log.1
[2025-11-27 17:52:44] -rw------- 1 boincer umatlas       353 Nov 27 17:52 output.list
[2025-11-27 17:52:44] -rw-r--r-- 1 boincer umatlas       620 Nov 27 17:52 runtime_log
[2025-11-27 17:52:44] -rw------- 1 boincer umatlas  11960320 Nov 27 17:52 result.tar.gz
[2025-11-27 17:52:44] -rw-r--r-- 1 boincer umatlas      8789 Nov 27 17:52 runtime_log.err
[2025-11-27 17:52:44] -rw------- 1 boincer umatlas       918 Nov 27 17:52 P3xKDml4cf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEPFKDm2mvONm.diag
[2025-11-27 17:52:44] -rw-r--r-- 1 boincer umatlas     25669 Nov 27 17:52 stderr.txt
[2025-11-27 17:52:44] HITS file was successfully produced:
[2025-11-27 17:52:44] -rw------- 1 boincer umatlas 915506355 Nov 27 17:51 shared/HITS.pool.root.1
[2025-11-27 17:52:44]  *** Contents of shared directory: ***
[2025-11-27 17:52:44] total 1306912
[2025-11-27 17:52:44] -rw-r--r-- 3 boincer umatlas 410189704 Nov 26 00:41 ATLAS.root_0
[2025-11-27 17:52:44] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 00:41 start_atlas.sh
[2025-11-27 17:52:44] -rw-r--r-- 2 boincer umatlas    590103 Nov 26 00:41 input.tar.gz
[2025-11-27 17:52:44] -rw------- 1 boincer umatlas 915506355 Nov 27 17:51 HITS.pool.root.1
[2025-11-27 17:52:44] -rw------- 1 boincer umatlas  11960320 Nov 27 17:52 result.tar.gz
17:52:45 (26405): run_atlas exited; CPU time 540546.874939
17:52:45 (26405): called boinc_finish(0)

</stderr_txt>
]]>

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