Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
00:40:38 (815906): wrapper (7.7.26015): starting
00:40:38 (815906): wrapper: running run_atlas (--nthreads 12)
[2025-11-28 00:40:38] Arguments: --nthreads 12
[2025-11-28 00:40:38] Threads: 12
[2025-11-28 00:40:38] Checking for CVMFS
[2025-11-28 00:40:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 00:40:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 00:40:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 00:40:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 00:40:38] 2.13.3.0 2257978 2566 46740 153391 0 81 4053265 4096000 0 130560 0 1532405 99.984 108715 1959 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-28 00:40:38] CVMFS is ok
[2025-11-28 00:40:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 00:40:38] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-28 00:40:38] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-28 00:40:38] Further information can be found at the LHC@home message board.
[2025-11-28 00:40:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 00:40:38] Checking for apptainer binary...
[2025-11-28 00:40:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 00:40:38] Running /usr/bin/apptainer --version
[2025-11-28 00:40:38] apptainer version 1.4.4
[2025-11-28 00:40:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 00:40:38] BoincUbuntu
[2025-11-28 00:40:38] apptainer works
[2025-11-28 00:40:38] Set ATHENA_PROC_NUMBER=12
[2025-11-28 00:40:38] Set ATHENA_CORE_NUMBER=12
[2025-11-28 00:40:38] Starting ATLAS job with PandaID=6891562501
[2025-11-28 00:40:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 04:22:12]  *** The last 200 lines of the pilot log: ***
[2025-11-28 04:22:12] 2025-11-28 04:21:02,698 | INFO     | monitor loop #998: job 0:6891562501 is in state 'finished'
[2025-11-28 04:22:12] 2025-11-28 04:21:02,698 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 04:22:12] 2025-11-28 04:21:03,451 | INFO     | time since job start (13219s) is within the limit (172800.0s)
[2025-11-28 04:22:12] 2025-11-28 04:21:04,716 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 04:22:12] 2025-11-28 04:21:04,718 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3508.16725
[2025-11-28 04:22:12] 2025-11-28 04:21:04,719 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6891562501/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 04:22:12] 2025-11-28 04:21:04,719 | INFO     | extracted standard info from prmon json
[2025-11-28 04:22:12] 2025-11-28 04:21:04,719 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 04:22:12] 2025-11-28 04:21:04,719 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 04:22:12] 2025-11-28 04:21:04,721 | INFO     | fitting pss+swap vs Time
[2025-11-28 04:22:12] 2025-11-28 04:21:04,721 | INFO     | sum of square deviations: 3168455951.917069
[2025-11-28 04:22:12] 2025-11-28 04:21:04,721 | INFO     | sum of deviations: 66582851692.0276
[2025-11-28 04:22:12] 2025-11-28 04:21:04,721 | INFO     | mean x: 1764297051.6036866
[2025-11-28 04:22:12] 2025-11-28 04:21:04,721 | INFO     | mean y: 3484431.465437788
[2025-11-28 04:22:12] 2025-11-28 04:21:04,721 | INFO     | intersect: -37071965159.85163
[2025-11-28 04:22:12] 2025-11-28 04:21:04,722 | INFO     | chi2: 3.7894533506939445
[2025-11-28 04:22:12] 2025-11-28 04:21:04,722 | INFO     | sum of square deviations: 2954482590.051891
[2025-11-28 04:22:12] 2025-11-28 04:21:04,722 | INFO     | sum of deviations: 136265549641.78307
[2025-11-28 04:22:12] 2025-11-28 04:21:04,722 | INFO     | mean x: 1764296899.1179245
[2025-11-28 04:22:12] 2025-11-28 04:21:04,722 | INFO     | mean y: 3533874.6886792453
[2025-11-28 04:22:12] 2025-11-28 04:21:04,722 | INFO     | intersect: -81368712994.8977
[2025-11-28 04:22:12] 2025-11-28 04:21:04,722 | INFO     | chi2: 1.5612170240378263
[2025-11-28 04:22:12] 2025-11-28 04:21:04,722 | INFO     | current chi2=1.5612170240378263 (change=58.80099635605942 %)
[2025-11-28 04:22:12] 2025-11-28 04:21:04,722 | INFO     | sum of square deviations: 2750369878.096619
[2025-11-28 04:22:12] 2025-11-28 04:21:04,723 | INFO     | sum of deviations: 130680335822.01443
[2025-11-28 04:22:12] 2025-11-28 04:21:04,723 | INFO     | mean x: 1764296746.6328502
[2025-11-28 04:22:12] 2025-11-28 04:21:04,723 | INFO     | mean y: 3529702.144927536
[2025-11-28 04:22:12] 2025-11-28 04:21:04,723 | INFO     | intersect: -83824792144.96082
[2025-11-28 04:22:12] 2025-11-28 04:21:04,723 | INFO     | chi2: 1.5599939681050736
[2025-11-28 04:22:12] 2025-11-28 04:21:04,723 | INFO     | current chi2=1.5599939681050736 (change=0.0783399049537262 %)
[2025-11-28 04:22:12] 2025-11-28 04:21:04,723 | INFO     | right removable region: 206
[2025-11-28 04:22:12] 2025-11-28 04:21:04,723 | INFO     | sum of square deviations: 2954428788.5047274
[2025-11-28 04:22:12] 2025-11-28 04:21:04,724 | INFO     | sum of deviations: 16306676679.3821
[2025-11-28 04:22:12] 2025-11-28 04:21:04,724 | INFO     | mean x: 1764297204.1084905
[2025-11-28 04:22:12] 2025-11-28 04:21:04,724 | INFO     | mean y: 3519915.287735849
[2025-11-28 04:22:12] 2025-11-28 04:21:04,724 | INFO     | intersect: -9734343520.674694
[2025-11-28 04:22:12] 2025-11-28 04:21:04,724 | INFO     | chi2: 2.2974440374576606
[2025-11-28 04:22:12] 2025-11-28 04:21:04,724 | INFO     | current chi2=2.2974440374576606 (change=39.37267925367281 %)
[2025-11-28 04:22:12] 2025-11-28 04:21:04,724 | INFO     | sum of square deviations: 2750288749.516923
[2025-11-28 04:22:12] 2025-11-28 04:21:04,724 | INFO     | sum of deviations: 7754343915.695644
[2025-11-28 04:22:12] 2025-11-28 04:21:04,724 | INFO     | mean x: 1764297356.6038647
[2025-11-28 04:22:12] 2025-11-28 04:21:04,724 | INFO     | mean y: 3526292.1304347827
[2025-11-28 04:22:12] 2025-11-28 04:21:04,724 | INFO     | intersect: -4970849025.756494
[2025-11-28 04:22:12] 2025-11-28 04:21:04,724 | INFO     | chi2: 2.286472938173854
[2025-11-28 04:22:12] 2025-11-28 04:21:04,725 | INFO     | current chi2=2.286472938173854 (change=0.47753499562701573 %)
[2025-11-28 04:22:12] 2025-11-28 04:21:04,725 | INFO     | left removable region: 20
[2025-11-28 04:22:12] 2025-11-28 04:21:04,725 | INFO     | sum of square deviations: 1995356250.3655865
[2025-11-28 04:22:12] 2025-11-28 04:21:04,725 | INFO     | sum of deviations: 59414688779.11828
[2025-11-28 04:22:12] 2025-11-28 04:21:04,725 | INFO     | mean x: 1764297326.139785
[2025-11-28 04:22:12] 2025-11-28 04:21:04,725 | INFO     | mean y: 3585623.4569892474
[2025-11-28 04:22:12] 2025-11-28 04:21:04,725 | INFO     | intersect: -52530981337.81619
[2025-11-28 04:22:12] 2025-11-28 04:21:04,725 | INFO     | chi2: 0.016903087747184853
[2025-11-28 04:22:12] 2025-11-28 04:21:04,725 | INFO     | current memory leak: 29.78 B/s (using 186 data points, chi2=0.02)
[2025-11-28 04:22:12] 2025-11-28 04:21:04,725 | INFO     | could have reported an average CPU frequency of 3792 MHz (11 samples)
[2025-11-28 04:22:12] 2025-11-28 04:21:04,725 | INFO     | ..............................
[2025-11-28 04:22:12] 2025-11-28 04:21:04,725 | INFO     | . Timing measurements:
[2025-11-28 04:22:12] 2025-11-28 04:21:04,725 | INFO     | . get job = 0 s
[2025-11-28 04:22:12] 2025-11-28 04:21:04,726 | INFO     | . initial setup = 1 s
[2025-11-28 04:22:12] 2025-11-28 04:21:04,726 | INFO     | . payload setup = 3 s
[2025-11-28 04:22:12] 2025-11-28 04:21:04,726 | INFO     | . stage-in = 0 s
[2025-11-28 04:22:12] 2025-11-28 04:21:04,726 | INFO     | . payload execution = 13190 s
[2025-11-28 04:22:12] 2025-11-28 04:21:04,726 | INFO     | . stage-out = 1 s
[2025-11-28 04:22:12] 2025-11-28 04:21:04,726 | INFO     | . log creation = 0 s
[2025-11-28 04:22:12] 2025-11-28 04:21:04,726 | INFO     | ..............................
[2025-11-28 04:22:12] 2025-11-28 04:21:05,144 | INFO     | 
[2025-11-28 04:22:12] 2025-11-28 04:21:05,144 | INFO     | job summary report
[2025-11-28 04:22:12] 2025-11-28 04:21:05,144 | INFO     | --------------------------------------------------
[2025-11-28 04:22:12] 2025-11-28 04:21:05,144 | INFO     | PanDA job id: 6891562501
[2025-11-28 04:22:12] 2025-11-28 04:21:05,144 | INFO     | task id: 47493068
[2025-11-28 04:22:12] 2025-11-28 04:21:05,144 | INFO     | errors: (none)
[2025-11-28 04:22:12] 2025-11-28 04:21:05,144 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 04:22:12] 2025-11-28 04:21:05,144 | INFO     | pilot state: finished 
[2025-11-28 04:22:12] 2025-11-28 04:21:05,144 | INFO     | transexitcode: 0
[2025-11-28 04:22:12] 2025-11-28 04:21:05,144 | INFO     | exeerrorcode: 0
[2025-11-28 04:22:12] 2025-11-28 04:21:05,144 | INFO     | exeerrordiag: 
[2025-11-28 04:22:12] 2025-11-28 04:21:05,144 | INFO     | exitcode: 0
[2025-11-28 04:22:12] 2025-11-28 04:21:05,144 | INFO     | exitmsg: OK
[2025-11-28 04:22:12] 2025-11-28 04:21:05,144 | INFO     | cpuconsumptiontime: 153140 s
[2025-11-28 04:22:12] 2025-11-28 04:21:05,144 | INFO     | nevents: 1000
[2025-11-28 04:22:12] 2025-11-28 04:21:05,144 | INFO     | neventsw: 0
[2025-11-28 04:22:12] 2025-11-28 04:21:05,145 | INFO     | pid: 826562
[2025-11-28 04:22:12] 2025-11-28 04:21:05,145 | INFO     | pgrp: 826562
[2025-11-28 04:22:12] 2025-11-28 04:21:05,145 | INFO     | corecount: 12
[2025-11-28 04:22:12] 2025-11-28 04:21:05,145 | INFO     | event service: False
[2025-11-28 04:22:12] 2025-11-28 04:21:05,145 | INFO     | sizes: {0: 2284311, 2: 2284573, 11: 2284601, 13197: 2315843, 13198: 2324851, 13201: 2324907, 13207: 2325281}
[2025-11-28 04:22:12] 2025-11-28 04:21:05,145 | INFO     | --------------------------------------------------
[2025-11-28 04:22:12] 2025-11-28 04:21:05,145 | INFO     | 
[2025-11-28 04:22:12] 2025-11-28 04:21:05,145 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-28 04:22:12] 2025-11-28 04:21:05,159 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 04:22:12] 2025-11-28 04:21:05,159 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 04:22:12] 2025-11-28 04:21:05,160 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 04:22:12] 2025-11-28 04:21:05,160 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 04:22:12] 2025-11-28 04:21:05,160 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 04:22:12] 2025-11-28 04:21:05,160 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 04:22:12] 2025-11-28 04:21:05,160 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 04:22:12] 2025-11-28 04:21:05,160 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 04:22:12] 2025-11-28 04:21:05,160 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 04:22:12] 2025-11-28 04:21:05,160 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 04:22:12] 2025-11-28 04:21:05,160 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 04:22:12] 2025-11-28 04:21:05,160 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 04:22:12] 2025-11-28 04:21:05,160 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 04:22:12] 2025-11-28 04:21:05,160 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 04:22:12] 2025-11-28 04:21:05,160 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 04:22:12] 2025-11-28 04:21:05,160 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 04:22:12] 2025-11-28 04:21:05,160 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 04:22:12] 2025-11-28 04:21:05,160 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 04:22:12] 2025-11-28 04:21:05,160 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 04:22:12] 2025-11-28 04:21:05,160 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 04:22:12] 2025-11-28 04:21:05,160 | INFO     | job 6891562501 has completed (purged errors)
[2025-11-28 04:22:12] 2025-11-28 04:21:05,160 | INFO     | overall cleanup function is called
[2025-11-28 04:22:12] 2025-11-28 04:21:06,173 | INFO     | --- collectZombieJob: --- 10, [826562]
[2025-11-28 04:22:12] 2025-11-28 04:21:06,173 | INFO     | zombie collector waiting for pid 826562
[2025-11-28 04:22:12] 2025-11-28 04:21:06,173 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 04:22:12] 2025-11-28 04:21:06,173 | INFO     | collected zombie processes
[2025-11-28 04:22:12] 2025-11-28 04:21:06,173 | INFO     | will attempt to kill all subprocesses of pid=826562
[2025-11-28 04:22:12] 2025-11-28 04:21:06,223 | INFO     | process IDs to be killed: [826562] (in reverse order)
[2025-11-28 04:22:12] 2025-11-28 04:21:06,251 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 04:22:12] 2025-11-28 04:21:06,251 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 04:22:12] 2025-11-28 04:21:06,253 | INFO     | did not find any defunct processes belonging to 826562
[2025-11-28 04:22:12] 2025-11-28 04:21:06,254 | INFO     | did not find any defunct processes belonging to 826562
[2025-11-28 04:22:12] 2025-11-28 04:21:06,255 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 04:22:12] 2025-11-28 04:21:06,255 | INFO     | ready for new job
[2025-11-28 04:22:12] 2025-11-28 04:21:06,255 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 04:22:12] 2025-11-28 04:21:06,256 | INFO     | ***************************************
[2025-11-28 04:22:12] 2025-11-28 04:21:06,256 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 04:22:12] 2025-11-28 04:21:06,256 | INFO     | ***************************************
[2025-11-28 04:22:12] 2025-11-28 04:21:06,256 | INFO     | 
[2025-11-28 04:22:12] 2025-11-28 04:21:06,257 | INFO     | architecture information:
[2025-11-28 04:22:12] 2025-11-28 04:21:06,257 | INFO     | executing command: cat /etc/os-release
[2025-11-28 04:22:12] 2025-11-28 04:21:06,266 | INFO     | cat /etc/os-release:
[2025-11-28 04:22:12] NAME="CentOS Linux"
[2025-11-28 04:22:12] VERSION="7 (Core)"
[2025-11-28 04:22:12] ID="centos"
[2025-11-28 04:22:12] ID_LIKE="rhel fedora"
[2025-11-28 04:22:12] VERSION_ID="7"
[2025-11-28 04:22:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 04:22:12] ANSI_COLOR="0;31"
[2025-11-28 04:22:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 04:22:12] HOME_URL="https://www.centos.org/"
[2025-11-28 04:22:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 04:22:12] 
[2025-11-28 04:22:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 04:22:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 04:22:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 04:22:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 04:22:12] 
[2025-11-28 04:22:12] 2025-11-28 04:21:06,267 | INFO     | ***************************************
[2025-11-28 04:22:12] 2025-11-28 04:21:06,769 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-28 04:22:12] 2025-11-28 04:21:06,779 | INFO     | sufficient remaining disk space (340989575168 B)
[2025-11-28 04:22:12] 2025-11-28 04:21:06,779 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 04:22:12] 2025-11-28 04:21:06,780 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 04:22:12] 2025-11-28 04:21:06,780 | INFO     | update_server=False
[2025-11-28 04:22:12] 2025-11-28 04:21:06,780 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 04:22:12] 2025-11-28 04:21:06,780 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 04:22:12] 2025-11-28 04:21:06,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 04:22:12] 2025-11-28 04:21:06,780 | INFO     | aborting loop
[2025-11-28 04:22:12] 2025-11-28 04:21:07,482 | INFO     | all data control threads have been joined
[2025-11-28 04:22:12] 2025-11-28 04:21:07,785 | INFO     | [job] retrieve thread has finished
[2025-11-28 04:22:12] 2025-11-28 04:21:07,785 | INFO     | [job] job monitor thread has finished
[2025-11-28 04:22:12] 2025-11-28 04:21:07,908 | INFO     | [payload] validate_post thread has finished
[2025-11-28 04:22:12] 2025-11-28 04:21:07,942 | INFO     | [payload] failed_post thread has finished
[2025-11-28 04:22:12] 2025-11-28 04:21:08,066 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 04:22:12] 2025-11-28 04:21:08,127 | INFO     | all payload control threads have been joined
[2025-11-28 04:22:12] 2025-11-28 04:21:08,316 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 04:22:12] 2025-11-28 04:21:08,325 | INFO     | all job control threads have been joined
[2025-11-28 04:22:12] 2025-11-28 04:21:08,332 | INFO     | [data] copytool_in thread has finished
[2025-11-28 04:22:12] 2025-11-28 04:21:08,487 | INFO     | [data] control thread has finished
[2025-11-28 04:22:12] 2025-11-28 04:21:08,682 | INFO     | [job] validate thread has finished
[2025-11-28 04:22:12] 2025-11-28 04:21:08,785 | INFO     | [data] copytool_out thread has finished
[2025-11-28 04:22:12] 2025-11-28 04:21:09,049 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 04:22:12] 2025-11-28 04:21:09,133 | INFO     | [payload] control thread has finished
[2025-11-28 04:22:12] 2025-11-28 04:21:09,233 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 04:22:12] 2025-11-28 04:21:09,330 | INFO     | [job] control thread has finished
[2025-11-28 04:22:12] 2025-11-28 04:21:09,765 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 04:22:12] 2025-11-28 04:21:10,771 | INFO     | [job] queue monitor thread has finished
[2025-11-28 04:22:12] 2025-11-28 04:21:13,055 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 04:22:12] 2025-11-28 04:21:16,875 | INFO     | job.realtimelogging is not enabled
[2025-11-28 04:22:12] 2025-11-28 04:21:17,880 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 04:22:12] 2025-11-28 04:21:36,592 | INFO     | PID=819756 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-28 04:22:12] 2025-11-28 04:21:36,592 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 04:22:12] 2025-11-28 04:21:36,592 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 04:22:12] 2025-11-28 04:21:36,592 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 04:22:12] 2025-11-28 04:22:05,767 | INFO     | [monitor] cgroup control has ended
[2025-11-28 04:22:12] 2025-11-28 04:22:06,900 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132194075612992)>', '<ExcThread(monitor, started 132193439438592)>']
[2025-11-28 04:22:12] 2025-11-28 04:22:07,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 04:22:12] 2025-11-28 04:22:07,715 | INFO     | [monitor] control thread has ended
[2025-11-28 04:22:12] 2025-11-28 04:22:11,920 | INFO     | all workflow threads have been joined
[2025-11-28 04:22:12] 2025-11-28 04:22:11,920 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 04:22:12] 2025-11-28 04:22:11,921 | INFO     | traces error code: 0
[2025-11-28 04:22:12] 2025-11-28 04:22:11,921 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 04:22:12] 2025-11-28 04:22:11,981 [wrapper] ==== pilot stdout END ====
[2025-11-28 04:22:12] 2025-11-28 04:22:11,983 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 04:22:12] 2025-11-28 04:22:11,985 [wrapper] pilotpid: 819756
[2025-11-28 04:22:12] 2025-11-28 04:22:11,986 [wrapper] Pilot exit status: 0
[2025-11-28 04:22:12] 2025-11-28 04:22:11,992 [wrapper] pandaids: 6891562501
[2025-11-28 04:22:12] 2025-11-28 04:22:12,011 [wrapper] cleanup supervisor_pilot 1032939 819757
[2025-11-28 04:22:12] 2025-11-28 04:22:12,012 [wrapper] Test setup, not cleaning
[2025-11-28 04:22:12] 2025-11-28 04:22:12,014 [wrapper] apfmon messages muted
[2025-11-28 04:22:12] 2025-11-28 04:22:12,015 [wrapper] ==== wrapper stdout END ====
[2025-11-28 04:22:12] 2025-11-28 04:22:12,017 [wrapper] ==== wrapper stderr END ====
[2025-11-28 04:22:12]  *** Error codes and diagnostics ***
[2025-11-28 04:22:12]     "exeErrorCode": 0,
[2025-11-28 04:22:12]     "exeErrorDiag": "",
[2025-11-28 04:22:12]     "pilotErrorCode": 0,
[2025-11-28 04:22:12]     "pilotErrorDiag": "",
[2025-11-28 04:22:12]  *** Listing of results directory ***
[2025-11-28 04:22:12] total 1315124
[2025-11-28 04:22:12] -rw-r--r-- 1 boinc boinc    576529 Nov 18 15:15 pilot3.tar.gz
[2025-11-28 04:22:12] -rw-r--r-- 1 boinc boinc      5112 Nov 18 15:27 queuedata.json
[2025-11-28 04:22:12] -rwx------ 1 boinc boinc     36292 Nov 18 15:27 runpilot2-wrapper.sh
[2025-11-28 04:22:12] -rw-r--r-- 1 boinc boinc       100 Nov 28 00:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 04:22:12] -rwxr-xr-x 1 boinc boinc      7986 Nov 28 00:40 run_atlas
[2025-11-28 04:22:12] -rw-r--r-- 1 boinc boinc       105 Nov 28 00:40 job.xml
[2025-11-28 04:22:12] -rw-r--r-- 2 boinc boinc 408788255 Nov 28 00:40 EVNT.47493065._000105.pool.root.1
[2025-11-28 04:22:12] -rw-r--r-- 1 boinc boinc      9656 Nov 28 00:40 init_data.xml
[2025-11-28 04:22:12] drwxrwx--x 2 boinc boinc      4096 Nov 28 00:40 shared
[2025-11-28 04:22:12] -rw-r--r-- 2 boinc boinc    590101 Nov 28 00:40 input.tar.gz
[2025-11-28 04:22:12] -rw-r--r-- 2 boinc boinc     15120 Nov 28 00:40 start_atlas.sh
[2025-11-28 04:22:12] -rw-r--r-- 1 boinc boinc         0 Nov 28 00:40 boinc_lockfile
[2025-11-28 04:22:12] -rw-r--r-- 1 boinc boinc      2773 Nov 28 00:40 pandaJob.out
[2025-11-28 04:22:12] -rw------- 1 boinc boinc    991826 Nov 28 00:40 agis_schedconf.cvmfs.json
[2025-11-28 04:22:12] drwx------ 5 boinc boinc      4096 Nov 28 00:40 pilot3
[2025-11-28 04:22:12] -rw-r--r-- 1 boinc boinc       532 Nov 28 04:15 boinc_task_state.xml
[2025-11-28 04:22:12] -rw------- 1 boinc boinc 926256440 Nov 28 04:20 HITS.47493068._001046.pool.root.1
[2025-11-28 04:22:12] -rw------- 1 boinc boinc        95 Nov 28 04:20 pilot_heartbeat.json
[2025-11-28 04:22:12] -rw------- 1 boinc boinc      1035 Nov 28 04:20 memory_monitor_summary.json
[2025-11-28 04:22:12] -rw------- 1 boinc boinc   1516240 Nov 28 04:20 agis_ddmendpoints.agis.ALL.json
[2025-11-28 04:22:12] -rw------- 1 boinc boinc   1960455 Nov 28 04:20 log.47493068._001046.job.log.tgz.1
[2025-11-28 04:22:12] -rw------- 1 boinc boinc      8570 Nov 28 04:21 heartbeat.json
[2025-11-28 04:22:12] -rw-r--r-- 1 boinc boinc        29 Nov 28 04:21 wrapper_checkpoint.txt
[2025-11-28 04:22:12] -rw-r--r-- 1 boinc boinc      8192 Nov 28 04:21 boinc_mmap_file
[2025-11-28 04:22:12] -rw------- 1 boinc boinc      4827 Nov 28 04:22 pilotlog.txt
[2025-11-28 04:22:12] -rw------- 1 boinc boinc   1898019 Nov 28 04:22 log.47493068._001046.job.log.1
[2025-11-28 04:22:12] -rw------- 1 boinc boinc       353 Nov 28 04:22 output.list
[2025-11-28 04:22:12] -rw-r--r-- 1 boinc boinc       620 Nov 28 04:22 runtime_log
[2025-11-28 04:22:12] -rw------- 1 boinc boinc   3880960 Nov 28 04:22 result.tar.gz
[2025-11-28 04:22:12] -rw-r--r-- 1 boinc boinc      8784 Nov 28 04:22 runtime_log.err
[2025-11-28 04:22:12] -rw------- 1 boinc boinc       658 Nov 28 04:22 LERODmXncf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8QFKDm7lUL0n.diag
[2025-11-28 04:22:12] -rw-r--r-- 1 boinc boinc     21379 Nov 28 04:22 stderr.txt
[2025-11-28 04:22:12] HITS file was successfully produced:
[2025-11-28 04:22:12] -rw------- 1 boinc boinc 926256440 Nov 28 04:20 shared/HITS.pool.root.1
[2025-11-28 04:22:12]  *** Contents of shared directory: ***
[2025-11-28 04:22:12] total 1308152
[2025-11-28 04:22:12] -rw-r--r-- 2 boinc boinc 408788255 Nov 28 00:40 ATLAS.root_0
[2025-11-28 04:22:12] -rw-r--r-- 2 boinc boinc    590101 Nov 28 00:40 input.tar.gz
[2025-11-28 04:22:12] -rw-r--r-- 2 boinc boinc     15120 Nov 28 00:40 start_atlas.sh
[2025-11-28 04:22:12] -rw------- 1 boinc boinc 926256440 Nov 28 04:20 HITS.pool.root.1
[2025-11-28 04:22:12] -rw------- 1 boinc boinc   3880960 Nov 28 04:22 result.tar.gz
04:22:13 (815906): run_atlas exited; CPU time 152857.810881
04:22:13 (815906): called boinc_finish(0)

</stderr_txt>
]]>

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