Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:57:22 (739266): wrapper (7.7.26015): starting
05:57:22 (739266): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 05:57:22] Arguments: --nthreads 8
[2025-11-26 05:57:22] Threads: 8
[2025-11-26 05:57:22] Checking for CVMFS
[2025-11-26 05:57:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 05:57:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 05:57:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 05:57:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 05:57:23] 2.13.2.0 6491 36412 241488 153318 3 643 22859499 40960000 21355 16776704 0 154384628 99.581 156890967 40400 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 05:57:23] CVMFS is ok
[2025-11-26 05:57:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 05:57:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 05:57:23] Further information can be found at the LHC@home message board.
[2025-11-26 05:57:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 05:57:23] Checking for apptainer binary...
[2025-11-26 05:57:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 05:57:23] Running /usr/bin/apptainer --version
[2025-11-26 05:57:23] apptainer version 1.4.4-1.el9
[2025-11-26 05:57:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 05:57:23] c-212-20.aglt2.org
[2025-11-26 05:57:23] apptainer works
[2025-11-26 05:57:23] Set ATHENA_PROC_NUMBER=8
[2025-11-26 05:57:23] Set ATHENA_CORE_NUMBER=8
[2025-11-26 05:57:24] Starting ATLAS job with PandaID=6896243000
[2025-11-26 05:57:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 19:50:54]  *** The last 200 lines of the pilot log: ***
[2025-11-26 19:50:54] 2025-11-27 00:50:15,213 | INFO     | sum of square deviations: 169077272599.92157
[2025-11-26 19:50:54] 2025-11-27 00:50:15,263 | INFO     | time since job start (49919s) is within the limit (172800.0s)
[2025-11-26 19:50:54] 2025-11-27 00:50:15,274 | INFO     | sum of deviations: 2006719214566.7917
[2025-11-26 19:50:54] 2025-11-27 00:50:15,274 | INFO     | mean x: 1764179677.9902081
[2025-11-26 19:50:54] 2025-11-27 00:50:15,275 | INFO     | mean y: 2867032.3488372094
[2025-11-26 19:50:54] 2025-11-27 00:50:15,275 | INFO     | intersect: -20935566639.622093
[2025-11-26 19:50:54] 2025-11-27 00:50:15,280 | INFO     | chi2: 11.645532897002967
[2025-11-26 19:50:54] 2025-11-27 00:50:15,280 | INFO     | sum of square deviations: 165992073444.99503
[2025-11-26 19:50:54] 2025-11-27 00:50:15,309 | INFO     | sum of deviations: 2275997371364.0195
[2025-11-26 19:50:54] 2025-11-27 00:50:15,310 | INFO     | mean x: 1764179525.502463
[2025-11-26 19:50:54] 2025-11-27 00:50:15,310 | INFO     | mean y: 2880345.9901477834
[2025-11-26 19:50:54] 2025-11-27 00:50:15,310 | INFO     | intersect: -24186635932.257763
[2025-11-26 19:50:54] 2025-11-27 00:50:15,350 | INFO     | chi2: 8.539572920066375
[2025-11-26 19:50:54] 2025-11-27 00:50:15,351 | INFO     | current chi2=8.539572920066375 (change=26.670827384257578 %)
[2025-11-26 19:50:54] 2025-11-27 00:50:15,351 | INFO     | sum of square deviations: 162944543867.87634
[2025-11-26 19:50:54] 2025-11-27 00:50:15,392 | INFO     | sum of deviations: 2419211124630.1
[2025-11-26 19:50:54] 2025-11-27 00:50:15,393 | INFO     | mean x: 1764179373.0123916
[2025-11-26 19:50:54] 2025-11-27 00:50:15,397 | INFO     | mean y: 2887490.5898389095
[2025-11-26 19:50:54] 2025-11-27 00:50:15,397 | INFO     | intersect: -26189596551.681496
[2025-11-26 19:50:54] 2025-11-27 00:50:15,398 | INFO     | chi2: 6.941186007671719
[2025-11-26 19:50:54] 2025-11-27 00:50:15,398 | INFO     | current chi2=6.941186007671719 (change=18.717410429727106 %)
[2025-11-26 19:50:54] 2025-11-27 00:50:15,398 | INFO     | right removable region: 806
[2025-11-26 19:50:54] 2025-11-27 00:50:15,399 | INFO     | sum of square deviations: 165991081584.99515
[2025-11-26 19:50:54] 2025-11-27 00:50:15,429 | INFO     | sum of deviations: 1680203253655.1257
[2025-11-26 19:50:54] 2025-11-27 00:50:15,429 | INFO     | mean x: 1764179830.502463
[2025-11-26 19:50:54] 2025-11-27 00:50:15,429 | INFO     | mean y: 2883164.4359605913
[2025-11-26 19:50:54] 2025-11-27 00:50:15,429 | INFO     | intersect: -17854586423.321312
[2025-11-26 19:50:54] 2025-11-27 00:50:15,434 | INFO     | chi2: 7.4749992593815655
[2025-11-26 19:50:54] 2025-11-27 00:50:15,434 | INFO     | current chi2=7.4749992593815655 (change=35.812303949566 %)
[2025-11-26 19:50:54] 2025-11-27 00:50:15,435 | INFO     | sum of square deviations: 162942708010.84998
[2025-11-26 19:50:54] 2025-11-27 00:50:15,460 | INFO     | sum of deviations: 1425453976234.421
[2025-11-26 19:50:54] 2025-11-27 00:50:15,460 | INFO     | mean x: 1764179983.0136306
[2025-11-26 19:50:54] 2025-11-27 00:50:15,460 | INFO     | mean y: 2895904.6889714994
[2025-11-26 19:50:54] 2025-11-27 00:50:15,460 | INFO     | intersect: -15430488026.873655
[2025-11-26 19:50:54] 2025-11-27 00:50:15,465 | INFO     | chi2: 5.071694816268487
[2025-11-26 19:50:54] 2025-11-27 00:50:15,465 | INFO     | current chi2=5.071694816268487 (change=32.15123319372626 %)
[2025-11-26 19:50:54] 2025-11-27 00:50:15,466 | INFO     | sum of square deviations: 159932166000.25565
[2025-11-26 19:50:54] 2025-11-27 00:50:15,492 | INFO     | sum of deviations: 1356165144331.9465
[2025-11-26 19:50:54] 2025-11-27 00:50:15,493 | INFO     | mean x: 1764180135.5174563
[2025-11-26 19:50:54] 2025-11-27 00:50:15,493 | INFO     | mean y: 2899413.896508728
[2025-11-26 19:50:54] 2025-11-27 00:50:15,497 | INFO     | intersect: -14956690441.891224
[2025-11-26 19:50:54] 2025-11-27 00:50:15,498 | INFO     | chi2: 5.000955617111587
[2025-11-26 19:50:54] 2025-11-27 00:50:15,498 | INFO     | current chi2=5.000955617111587 (change=1.3947842234116712 %)
[2025-11-26 19:50:54] 2025-11-27 00:50:15,498 | INFO     | left removable region: 30
[2025-11-26 19:50:54] 2025-11-27 00:50:15,499 | INFO     | sum of square deviations: 144879017528.77884
[2025-11-26 19:50:54] 2025-11-27 00:50:15,528 | INFO     | sum of deviations: 1607126358551.428
[2025-11-26 19:50:54] 2025-11-27 00:50:15,528 | INFO     | mean x: 1764180257.435567
[2025-11-26 19:50:54] 2025-11-27 00:50:15,529 | INFO     | mean y: 2928793.868556701
[2025-11-26 19:50:54] 2025-11-27 00:50:15,529 | INFO     | intersect: -19566920873.268684
[2025-11-26 19:50:54] 2025-11-27 00:50:15,529 | INFO     | chi2: 0.12250313947014015
[2025-11-26 19:50:54] 2025-11-27 00:50:15,530 | INFO     | current memory leak: 11.09 B/s (using 776 data points, chi2=0.12)
[2025-11-26 19:50:54] 2025-11-27 00:50:15,530 | INFO     | could have reported an average CPU frequency of 3167 MHz (31 samples)
[2025-11-26 19:50:54] 2025-11-27 00:50:15,531 | INFO     | ..............................
[2025-11-26 19:50:54] 2025-11-27 00:50:15,531 | INFO     | . Timing measurements:
[2025-11-26 19:50:54] 2025-11-27 00:50:15,531 | INFO     | . get job = 0 s
[2025-11-26 19:50:54] 2025-11-27 00:50:15,531 | INFO     | . initial setup = 8 s
[2025-11-26 19:50:54] 2025-11-27 00:50:15,531 | INFO     | . payload setup = 23 s
[2025-11-26 19:50:54] 2025-11-27 00:50:15,531 | INFO     | . stage-in = 0 s
[2025-11-26 19:50:54] 2025-11-27 00:50:15,531 | INFO     | . payload execution = 49825 s
[2025-11-26 19:50:54] 2025-11-27 00:50:15,531 | INFO     | . stage-out = 4 s
[2025-11-26 19:50:54] 2025-11-27 00:50:15,531 | INFO     | . log creation = 0 s
[2025-11-26 19:50:54] 2025-11-27 00:50:15,531 | INFO     | ..............................
[2025-11-26 19:50:54] 2025-11-27 00:50:15,612 | INFO     | 
[2025-11-26 19:50:54] 2025-11-27 00:50:15,612 | INFO     | job summary report
[2025-11-26 19:50:54] 2025-11-27 00:50:15,612 | INFO     | --------------------------------------------------
[2025-11-26 19:50:54] 2025-11-27 00:50:15,612 | INFO     | PanDA job id: 6896243000
[2025-11-26 19:50:54] 2025-11-27 00:50:15,612 | INFO     | task id: 47556185
[2025-11-26 19:50:54] 2025-11-27 00:50:15,612 | INFO     | errors: (none)
[2025-11-26 19:50:54] 2025-11-27 00:50:15,613 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 19:50:54] 2025-11-27 00:50:15,613 | INFO     | pilot state: finished 
[2025-11-26 19:50:54] 2025-11-27 00:50:15,613 | INFO     | transexitcode: 0
[2025-11-26 19:50:54] 2025-11-27 00:50:15,613 | INFO     | exeerrorcode: 0
[2025-11-26 19:50:54] 2025-11-27 00:50:15,613 | INFO     | exeerrordiag: 
[2025-11-26 19:50:54] 2025-11-27 00:50:15,613 | INFO     | exitcode: 0
[2025-11-26 19:50:54] 2025-11-27 00:50:15,613 | INFO     | exitmsg: OK
[2025-11-26 19:50:54] 2025-11-27 00:50:15,613 | INFO     | cpuconsumptiontime: 192996 s
[2025-11-26 19:50:54] 2025-11-27 00:50:15,613 | INFO     | nevents: 1000
[2025-11-26 19:50:54] 2025-11-27 00:50:15,613 | INFO     | neventsw: 0
[2025-11-26 19:50:54] 2025-11-27 00:50:15,613 | INFO     | pid: 751862
[2025-11-26 19:50:54] 2025-11-27 00:50:15,613 | INFO     | pgrp: 751862
[2025-11-26 19:50:54] 2025-11-27 00:50:15,613 | INFO     | corecount: 8
[2025-11-26 19:50:54] 2025-11-27 00:50:15,613 | INFO     | event service: False
[2025-11-26 19:50:54] 2025-11-27 00:50:15,614 | INFO     | sizes: {0: 2284139, 1: 2284338, 12: 2284338, 21: 2284628, 22: 2284656, 49853: 2333249, 49857: 2342243, 49860: 2342299, 49872: 2342545}
[2025-11-26 19:50:54] 2025-11-27 00:50:15,614 | INFO     | --------------------------------------------------
[2025-11-26 19:50:54] 2025-11-27 00:50:15,614 | INFO     | 
[2025-11-26 19:50:54] 2025-11-27 00:50:15,614 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 19:50:54] 2025-11-27 00:50:15,655 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 19:50:54] 2025-11-27 00:50:15,655 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 19:50:54] 2025-11-27 00:50:15,656 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 19:50:54] 2025-11-27 00:50:15,656 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 19:50:54] 2025-11-27 00:50:15,656 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 19:50:54] 2025-11-27 00:50:15,656 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 19:50:54] 2025-11-27 00:50:15,656 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 19:50:54] 2025-11-27 00:50:15,656 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 19:50:54] 2025-11-27 00:50:15,656 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 19:50:54] 2025-11-27 00:50:15,656 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 19:50:54] 2025-11-27 00:50:15,656 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 19:50:54] 2025-11-27 00:50:15,656 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 19:50:54] 2025-11-27 00:50:15,656 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 19:50:54] 2025-11-27 00:50:15,656 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 19:50:54] 2025-11-27 00:50:15,656 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 19:50:54] 2025-11-27 00:50:15,656 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 19:50:54] 2025-11-27 00:50:15,656 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 19:50:54] 2025-11-27 00:50:15,657 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 19:50:54] 2025-11-27 00:50:15,657 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 19:50:54] 2025-11-27 00:50:15,657 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 19:50:54] 2025-11-27 00:50:15,657 | INFO     | job 6896243000 has completed (purged errors)
[2025-11-26 19:50:54] 2025-11-27 00:50:15,657 | INFO     | overall cleanup function is called
[2025-11-26 19:50:54] 2025-11-27 00:50:16,681 | INFO     | --- collectZombieJob: --- 10, [751862]
[2025-11-26 19:50:54] 2025-11-27 00:50:16,681 | INFO     | zombie collector waiting for pid 751862
[2025-11-26 19:50:54] 2025-11-27 00:50:16,681 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 19:50:54] 2025-11-27 00:50:16,681 | INFO     | collected zombie processes
[2025-11-26 19:50:54] 2025-11-27 00:50:16,681 | INFO     | will attempt to kill all subprocesses of pid=751862
[2025-11-26 19:50:54] 2025-11-27 00:50:17,149 | INFO     | process IDs to be killed: [751862] (in reverse order)
[2025-11-26 19:50:54] 2025-11-27 00:50:17,337 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 19:50:54] 2025-11-27 00:50:17,338 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 19:50:54] 2025-11-27 00:50:17,379 | INFO     | did not find any defunct processes belonging to 751862
[2025-11-26 19:50:54] 2025-11-27 00:50:17,481 | INFO     | did not find any defunct processes belonging to 751862
[2025-11-26 19:50:54] 2025-11-27 00:50:17,498 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 19:50:54] 2025-11-27 00:50:17,498 | INFO     | ready for new job
[2025-11-26 19:50:54] 2025-11-27 00:50:17,499 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 19:50:54] 2025-11-27 00:50:17,503 | INFO     | ***************************************
[2025-11-26 19:50:54] 2025-11-27 00:50:17,503 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 19:50:54] 2025-11-27 00:50:17,504 | INFO     | ***************************************
[2025-11-26 19:50:54] 2025-11-27 00:50:17,504 | INFO     | 
[2025-11-26 19:50:54] 2025-11-27 00:50:17,518 | INFO     | architecture information:
[2025-11-26 19:50:54] 2025-11-27 00:50:17,520 | INFO     | executing command: cat /etc/os-release
[2025-11-26 19:50:54] 2025-11-27 00:50:17,540 | INFO     | cat /etc/os-release:
[2025-11-26 19:50:54] NAME="CentOS Linux"
[2025-11-26 19:50:54] VERSION="7 (Core)"
[2025-11-26 19:50:54] ID="centos"
[2025-11-26 19:50:54] ID_LIKE="rhel fedora"
[2025-11-26 19:50:54] VERSION_ID="7"
[2025-11-26 19:50:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 19:50:54] ANSI_COLOR="0;31"
[2025-11-26 19:50:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 19:50:54] HOME_URL="https://www.centos.org/"
[2025-11-26 19:50:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 19:50:54] 
[2025-11-26 19:50:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 19:50:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 19:50:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 19:50:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 19:50:54] 
[2025-11-26 19:50:54] 2025-11-27 00:50:17,540 | INFO     | ***************************************
[2025-11-26 19:50:54] 2025-11-27 00:50:18,044 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 19:50:54] 2025-11-27 00:50:18,076 | INFO     | sufficient remaining disk space (121527861248 B)
[2025-11-26 19:50:54] 2025-11-27 00:50:18,077 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 19:50:54] 2025-11-27 00:50:18,077 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 19:50:54] 2025-11-27 00:50:18,077 | INFO     | update_server=False
[2025-11-26 19:50:54] 2025-11-27 00:50:18,077 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 19:50:54] 2025-11-27 00:50:18,451 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 19:50:54] 2025-11-27 00:50:18,451 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 19:50:54] 2025-11-27 00:50:18,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:50:54] 2025-11-27 00:50:18,451 | INFO     | will abort loop
[2025-11-26 19:50:54] 2025-11-27 00:50:18,494 | INFO     | all data control threads have been joined
[2025-11-26 19:50:54] 2025-11-27 00:50:19,083 | INFO     | [job] retrieve thread has finished
[2025-11-26 19:50:54] 2025-11-27 00:50:19,151 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 19:50:54] 2025-11-27 00:50:19,151 | INFO     | all payload control threads have been joined
[2025-11-26 19:50:54] 2025-11-27 00:50:19,231 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 19:50:54] 2025-11-27 00:50:19,250 | INFO     | all job control threads have been joined
[2025-11-26 19:50:54] 2025-11-27 00:50:19,460 | INFO     | [job] job monitor thread has finished
[2025-11-26 19:50:54] 2025-11-27 00:50:19,500 | INFO     | [data] control thread has finished
[2025-11-26 19:50:54] 2025-11-27 00:50:19,518 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 19:50:54] 2025-11-27 00:50:19,705 | INFO     | [data] copytool_in thread has finished
[2025-11-26 19:50:54] 2025-11-27 00:50:19,720 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 19:50:54] 2025-11-27 00:50:19,904 | INFO     | [payload] failed_post thread has finished
[2025-11-26 19:50:54] 2025-11-27 00:50:20,045 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 19:50:54] 2025-11-27 00:50:20,173 | INFO     | [payload] control thread has finished
[2025-11-26 19:50:54] 2025-11-27 00:50:20,257 | INFO     | [job] control thread has finished
[2025-11-26 19:50:54] 2025-11-27 00:50:20,285 | INFO     | [job] validate thread has finished
[2025-11-26 19:50:54] 2025-11-27 00:50:20,305 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 19:50:54] 2025-11-27 00:50:20,459 | INFO     | [payload] validate_post thread has finished
[2025-11-26 19:50:54] 2025-11-27 00:50:20,659 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:50:54] 2025-11-27 00:50:21,163 | INFO     | [data] copytool_out thread has finished
[2025-11-26 19:50:54] 2025-11-27 00:50:21,666 | INFO     | [job] queue monitor thread has finished
[2025-11-26 19:50:54] 2025-11-27 00:50:23,237 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 19:50:54] 2025-11-27 00:50:42,279 | INFO     | [monitor] cgroup control has ended
[2025-11-26 19:50:54] 2025-11-27 00:50:43,285 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139779484636992)>', '<ExcThread(monitor, started 139778628511488)>']
[2025-11-26 19:50:54] 2025-11-27 00:50:48,311 | INFO     | all workflow threads have been joined
[2025-11-26 19:50:54] 2025-11-27 00:50:48,311 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 19:50:54] 2025-11-27 00:50:48,312 | INFO     | traces error code: 0
[2025-11-26 19:50:54] 2025-11-27 00:50:48,312 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 19:50:54] 2025-11-27 00:50:52,304 | INFO     | PID=744185 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 19:50:54] 2025-11-27 00:50:52,304 | INFO     | .. there are 30 such processes running
[2025-11-26 19:50:54] 2025-11-27 00:50:52,305 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 19:50:54] 2025-11-27 00:50:52,305 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 19:50:54] 2025-11-27 00:50:52,305 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 19:50:54] 2025-11-27 00:50:52,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 19:50:54] 2025-11-27 00:50:52,312 | INFO     | [monitor] control thread has ended
[2025-11-26 19:50:54] 2025-11-27 00:50:53,079 [wrapper] ==== pilot stdout END ====
[2025-11-26 19:50:54] 2025-11-27 00:50:53,106 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 19:50:54] 2025-11-27 00:50:53,140 [wrapper] pilotpid: 744185
[2025-11-26 19:50:54] 2025-11-27 00:50:53,160 [wrapper] Pilot exit status: 0
[2025-11-26 19:50:54] 2025-11-27 00:50:53,229 [wrapper] pandaids: 6896243000
[2025-11-26 19:50:54] 2025-11-27 00:50:53,341 [wrapper] cleanup supervisor_pilot  605887 744186
[2025-11-26 19:50:54] 2025-11-27 00:50:53,343 [wrapper] Test setup, not cleaning
[2025-11-26 19:50:54] 2025-11-27 00:50:53,352 [wrapper] apfmon messages muted
[2025-11-26 19:50:54] 2025-11-27 00:50:53,358 [wrapper] ==== wrapper stdout END ====
[2025-11-26 19:50:54] 2025-11-27 00:50:53,360 [wrapper] ==== wrapper stderr END ====
[2025-11-26 19:50:54]  *** Error codes and diagnostics ***
[2025-11-26 19:50:54]     "exeErrorCode": 0,
[2025-11-26 19:50:54]     "exeErrorDiag": "",
[2025-11-26 19:50:54]     "pilotErrorCode": 0,
[2025-11-26 19:50:54]     "pilotErrorDiag": "",
[2025-11-26 19:50:54]  *** Listing of results directory ***
[2025-11-26 19:50:54] total 1305060
[2025-11-26 19:50:54] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 16:08 pilot3.tar.gz
[2025-11-26 19:50:54] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 16:26 queuedata.json
[2025-11-26 19:50:54] -rwx------. 1 boincer umatlas     36292 Nov 24 16:28 runpilot2-wrapper.sh
[2025-11-26 19:50:54] -rw-r--r--. 1 boincer umatlas       100 Nov 26 05:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 19:50:54] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 05:57 run_atlas
[2025-11-26 19:50:54] -rw-r--r--. 1 boincer umatlas       105 Nov 26 05:57 job.xml
[2025-11-26 19:50:54] -rw-r--r--. 2 boincer umatlas 410027982 Nov 26 05:57 EVNT.47483658._004245.pool.root.1
[2025-11-26 19:50:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 05:57 start_atlas.sh
[2025-11-26 19:50:54] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 05:57 shared
[2025-11-26 19:50:54] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 05:57 input.tar.gz
[2025-11-26 19:50:54] -rw-r--r--. 1 boincer umatlas         0 Nov 26 05:57 boinc_lockfile
[2025-11-26 19:50:54] -rw-r--r--. 1 boincer umatlas      2783 Nov 26 05:57 pandaJob.out
[2025-11-26 19:50:54] -rw-------. 1 boincer umatlas        57 Nov 26 05:57 setup.sh.local
[2025-11-26 19:50:54] -rw-------. 1 boincer umatlas    991827 Nov 26 05:58 agis_schedconf.cvmfs.json
[2025-11-26 19:50:54] drwx------. 5 boincer umatlas      4096 Nov 26 05:58 pilot3
[2025-11-26 19:50:54] -rw-r--r--. 1 boincer umatlas       533 Nov 26 19:40 boinc_task_state.xml
[2025-11-26 19:50:54] -rw-r--r--. 1 boincer umatlas      6948 Nov 26 19:48 init_data.xml
[2025-11-26 19:50:54] -rw-------. 1 boincer umatlas 905255194 Nov 26 19:49 HITS.47556185._000084.pool.root.1
[2025-11-26 19:50:54] -rw-------. 1 boincer umatlas      1063 Nov 26 19:49 memory_monitor_summary.json
[2025-11-26 19:50:54] -rw-------. 1 boincer umatlas        95 Nov 26 19:49 pilot_heartbeat.json
[2025-11-26 19:50:54] -rw-------. 1 boincer umatlas   1516240 Nov 26 19:49 agis_ddmendpoints.agis.ALL.json
[2025-11-26 19:50:54] -rw-------. 1 boincer umatlas   2026001 Nov 26 19:50 log.47556185._000084.job.log.tgz.1
[2025-11-26 19:50:54] -rw-------. 1 boincer umatlas      8621 Nov 26 19:50 heartbeat.json
[2025-11-26 19:50:54] -rw-r--r--. 1 boincer umatlas        29 Nov 26 19:50 wrapper_checkpoint.txt
[2025-11-26 19:50:54] -rw-------. 1 boincer umatlas       822 Nov 26 19:50 pilotlog.txt
[2025-11-26 19:50:54] -rw-------. 1 boincer umatlas   6564572 Nov 26 19:50 log.47556185._000084.job.log.1
[2025-11-26 19:50:54] -rw-------. 1 boincer umatlas       353 Nov 26 19:50 output.list
[2025-11-26 19:50:54] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 19:50 boinc_mmap_file
[2025-11-26 19:50:54] -rw-r--r--. 1 boincer umatlas       620 Nov 26 19:50 runtime_log
[2025-11-26 19:50:54] -rw-------. 1 boincer umatlas   8611840 Nov 26 19:50 result.tar.gz
[2025-11-26 19:50:54] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 19:50 runtime_log.err
[2025-11-26 19:50:54] -rw-------. 1 boincer umatlas       664 Nov 26 19:50 5MyLDmzHth8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlvLKDmj2I2Lo.diag
[2025-11-26 19:50:54] -rw-r--r--. 1 boincer umatlas     21202 Nov 26 19:50 stderr.txt
[2025-11-26 19:50:54] HITS file was successfully produced:
[2025-11-26 19:50:54] -rw-------. 1 boincer umatlas 905255194 Nov 26 19:49 shared/HITS.pool.root.1
[2025-11-26 19:50:54]  *** Contents of shared directory: ***
[2025-11-26 19:50:54] total 1293472
[2025-11-26 19:50:54] -rw-r--r--. 2 boincer umatlas 410027982 Nov 26 05:57 ATLAS.root_0
[2025-11-26 19:50:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 05:57 start_atlas.sh
[2025-11-26 19:50:54] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 05:57 input.tar.gz
[2025-11-26 19:50:54] -rw-------. 1 boincer umatlas 905255194 Nov 26 19:49 HITS.pool.root.1
[2025-11-26 19:50:54] -rw-------. 1 boincer umatlas   8611840 Nov 26 19:50 result.tar.gz
19:50:55 (739266): run_atlas exited; CPU time 193902.737682
19:50:55 (739266): called boinc_finish(0)

</stderr_txt>
]]>

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