Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:44:18 (27337): wrapper (7.7.26015): starting
00:44:18 (27337): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 00:44:18] Arguments: --nthreads 12
[2025-11-26 00:44:18] Threads: 12
[2025-11-26 00:44:18] Checking for CVMFS
[2025-11-26 00:44:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:44:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:44:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:44:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:44:18] 2.11.2.0 30551 117219 92620 153311 3 82 17840578 20275201 1 130560 0 52067936 99.917 6384468 28945 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:44:18] CVMFS is ok
[2025-11-26 00:44:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:44:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:44:18] Further information can be found at the LHC@home message board.
[2025-11-26 00:44:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:44:18] Checking for apptainer binary...
[2025-11-26 00:44:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:44:18] Running /usr/bin/apptainer --version
[2025-11-26 00:44:18] apptainer version 1.3.2-1.el7
[2025-11-26 00:44:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:44:19] c-205-16.aglt2.org
[2025-11-26 00:44:19] apptainer works
[2025-11-26 00:44:19] Set ATHENA_PROC_NUMBER=12
[2025-11-26 00:44:19] Set ATHENA_CORE_NUMBER=12
[2025-11-26 00:44:19] Starting ATLAS job with PandaID=6891572230
[2025-11-26 00:44:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 07:52:22]  *** The last 200 lines of the pilot log: ***
[2025-11-26 07:52:22] 2025-11-26 12:51:42,168 | INFO     | sum of square deviations: 22973415450.514244
[2025-11-26 07:52:22] 2025-11-26 12:51:42,172 | INFO     | sum of deviations: 371385958048.39954
[2025-11-26 07:52:22] 2025-11-26 12:51:42,172 | INFO     | mean x: 1764148682.6857142
[2025-11-26 07:52:22] 2025-11-26 12:51:42,172 | INFO     | mean y: 3433549.283333333
[2025-11-26 07:52:22] 2025-11-26 12:51:42,173 | INFO     | intersect: -28515619269.41238
[2025-11-26 07:52:22] 2025-11-26 12:51:42,173 | INFO     | chi2: 5.898209371542274
[2025-11-26 07:52:22] 2025-11-26 12:51:42,174 | INFO     | sum of square deviations: 22162689155.339725
[2025-11-26 07:52:22] 2025-11-26 12:51:42,174 | INFO     | sufficient remaining disk space (28379709440 B)
[2025-11-26 07:52:22] 2025-11-26 12:51:42,178 | INFO     | sum of deviations: 545811229997.8748
[2025-11-26 07:52:22] 2025-11-26 12:51:42,178 | INFO     | mean x: 1764148530.1879518
[2025-11-26 07:52:22] 2025-11-26 12:51:42,178 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-11-26 07:52:22] 2025-11-26 12:51:42,178 | INFO     | mean y: 3466323.334939759
[2025-11-26 07:52:22] 2025-11-26 12:51:42,179 | INFO     | intersect: -43443069988.745964
[2025-11-26 07:52:22] 2025-11-26 12:51:42,179 | INFO     | chi2: 2.355859698782342
[2025-11-26 07:52:22] 2025-11-26 12:51:42,179 | INFO     | current chi2=2.355859698782342 (change=60.05805236163857 %)
[2025-11-26 07:52:22] 2025-11-26 12:51:42,180 | INFO     | sum of square deviations: 21371215038.41215
[2025-11-26 07:52:22] 2025-11-26 12:51:42,183 | INFO     | sum of deviations: 541354055334.0533
[2025-11-26 07:52:22] 2025-11-26 12:51:42,184 | INFO     | mean x: 1764148377.685366
[2025-11-26 07:52:22] 2025-11-26 12:51:42,184 | INFO     | mean y: 3465450.775609756
[2025-11-26 07:52:22] 2025-11-26 12:51:42,184 | INFO     | intersect: -44684161188.81489
[2025-11-26 07:52:22] 2025-11-26 12:51:42,184 | INFO     | chi2: 2.3267401413992412
[2025-11-26 07:52:22] 2025-11-26 12:51:42,185 | INFO     | current chi2=2.3267401413992412 (change=1.2360480294370468 %)
[2025-11-26 07:52:22] 2025-11-26 12:51:42,185 | INFO     | right removable region: 409
[2025-11-26 07:52:22] 2025-11-26 12:51:42,185 | INFO     | sum of square deviations: 22162641575.339725
[2025-11-26 07:52:22] 2025-11-26 12:51:42,189 | INFO     | sum of deviations: 241690766043.59015
[2025-11-26 07:52:22] 2025-11-26 12:51:42,189 | INFO     | mean x: 1764148835.1879518
[2025-11-26 07:52:22] 2025-11-26 12:51:42,190 | INFO     | mean y: 3457855.518072289
[2025-11-26 07:52:22] 2025-11-26 12:51:42,190 | INFO     | intersect: -19235155102.330452
[2025-11-26 07:52:22] 2025-11-26 12:51:42,190 | INFO     | chi2: 3.7216060262731117
[2025-11-26 07:52:22] 2025-11-26 12:51:42,190 | INFO     | current chi2=3.7216060262731117 (change=36.902781982797265 %)
[2025-11-26 07:52:22] 2025-11-26 12:51:42,191 | INFO     | sum of square deviations: 21371170387.66102
[2025-11-26 07:52:22] 2025-11-26 12:51:42,195 | INFO     | sum of deviations: 211100029504.12885
[2025-11-26 07:52:22] 2025-11-26 12:51:42,195 | INFO     | mean x: 1764148987.690244
[2025-11-26 07:52:22] 2025-11-26 12:51:42,195 | INFO     | mean y: 3463742.6073170733
[2025-11-26 07:52:22] 2025-11-26 12:51:42,195 | INFO     | intersect: -17422437440.891148
[2025-11-26 07:52:22] 2025-11-26 12:51:42,195 | INFO     | chi2: 3.6788883788300297
[2025-11-26 07:52:22] 2025-11-26 12:51:42,196 | INFO     | current chi2=3.6788883788300297 (change=1.1478283069597297 %)
[2025-11-26 07:52:22] 2025-11-26 12:51:42,196 | INFO     | left removable region: 20
[2025-11-26 07:52:22] 2025-11-26 12:51:42,196 | INFO     | sum of square deviations: 18252584761.151684
[2025-11-26 07:52:22] 2025-11-26 12:51:42,200 | INFO     | sum of deviations: 343292015939.7124
[2025-11-26 07:52:22] 2025-11-26 12:51:42,200 | INFO     | mean x: 1764148957.1953728
[2025-11-26 07:52:22] 2025-11-26 12:51:42,200 | INFO     | mean y: 3504215.9511568123
[2025-11-26 07:52:22] 2025-11-26 12:51:42,200 | INFO     | intersect: -33176358245.09177
[2025-11-26 07:52:22] 2025-11-26 12:51:42,200 | INFO     | chi2: 0.04672730233692041
[2025-11-26 07:52:22] 2025-11-26 12:51:42,201 | INFO     | current memory leak: 18.81 B/s (using 389 data points, chi2=0.05)
[2025-11-26 07:52:22] 2025-11-26 12:51:42,201 | INFO     | could have reported an average CPU frequency of 2374 MHz (18 samples)
[2025-11-26 07:52:22] 2025-11-26 12:51:42,201 | INFO     | ..............................
[2025-11-26 07:52:22] 2025-11-26 12:51:42,202 | INFO     | . Timing measurements:
[2025-11-26 07:52:22] 2025-11-26 12:51:42,202 | INFO     | . get job = 0 s
[2025-11-26 07:52:22] 2025-11-26 12:51:42,202 | INFO     | . initial setup = 2 s
[2025-11-26 07:52:22] 2025-11-26 12:51:42,202 | INFO     | . payload setup = 7 s
[2025-11-26 07:52:22] 2025-11-26 12:51:42,202 | INFO     | . stage-in = 0 s
[2025-11-26 07:52:22] 2025-11-26 12:51:42,202 | INFO     | . payload execution = 25589 s
[2025-11-26 07:52:22] 2025-11-26 12:51:42,202 | INFO     | . stage-out = 3 s
[2025-11-26 07:52:22] 2025-11-26 12:51:42,202 | INFO     | . log creation = 0 s
[2025-11-26 07:52:22] 2025-11-26 12:51:42,203 | INFO     | ..............................
[2025-11-26 07:52:22] 2025-11-26 12:51:42,287 | INFO     | 
[2025-11-26 07:52:22] 2025-11-26 12:51:42,287 | INFO     | job summary report
[2025-11-26 07:52:22] 2025-11-26 12:51:42,287 | INFO     | --------------------------------------------------
[2025-11-26 07:52:22] 2025-11-26 12:51:42,287 | INFO     | PanDA job id: 6891572230
[2025-11-26 07:52:22] 2025-11-26 12:51:42,287 | INFO     | task id: 47493068
[2025-11-26 07:52:22] 2025-11-26 12:51:42,287 | INFO     | errors: (none)
[2025-11-26 07:52:22] 2025-11-26 12:51:42,287 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 07:52:22] 2025-11-26 12:51:42,288 | INFO     | pilot state: finished 
[2025-11-26 07:52:22] 2025-11-26 12:51:42,288 | INFO     | transexitcode: 0
[2025-11-26 07:52:22] 2025-11-26 12:51:42,288 | INFO     | exeerrorcode: 0
[2025-11-26 07:52:22] 2025-11-26 12:51:42,288 | INFO     | exeerrordiag: 
[2025-11-26 07:52:22] 2025-11-26 12:51:42,288 | INFO     | exitcode: 0
[2025-11-26 07:52:22] 2025-11-26 12:51:42,288 | INFO     | exitmsg: OK
[2025-11-26 07:52:22] 2025-11-26 12:51:42,289 | INFO     | cpuconsumptiontime: 294739 s
[2025-11-26 07:52:22] 2025-11-26 12:51:42,289 | INFO     | nevents: 1000
[2025-11-26 07:52:22] 2025-11-26 12:51:42,289 | INFO     | neventsw: 0
[2025-11-26 07:52:22] 2025-11-26 12:51:42,289 | INFO     | pid: 5195
[2025-11-26 07:52:22] 2025-11-26 12:51:42,289 | INFO     | pgrp: 5195
[2025-11-26 07:52:22] 2025-11-26 12:51:42,289 | INFO     | corecount: 12
[2025-11-26 07:52:22] 2025-11-26 12:51:42,289 | INFO     | event service: False
[2025-11-26 07:52:22] 2025-11-26 12:51:42,290 | INFO     | sizes: {0: 2284132, 1: 2284331, 5: 2284593, 11: 2284649, 25600: 2321790, 25604: 2330784, 25606: 2330968, 25611: 2331214}
[2025-11-26 07:52:22] 2025-11-26 12:51:42,290 | INFO     | --------------------------------------------------
[2025-11-26 07:52:22] 2025-11-26 12:51:42,290 | INFO     | 
[2025-11-26 07:52:22] 2025-11-26 12:51:42,290 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 07:52:22] 2025-11-26 12:51:42,296 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6891572230: 10678055 B (within 2537553920 B limit)
[2025-11-26 07:52:22] 2025-11-26 12:51:42,296 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6891572230/HITS.47493068._003347.pool.root.1 does not exist (skip from workdir size calculation)
[2025-11-26 07:52:22] 2025-11-26 12:51:42,296 | INFO     | total size of present files: 0 B (workdir size: 10678055 B)
[2025-11-26 07:52:22] 2025-11-26 12:51:42,297 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6891572230/HITS.47493068._003347.pool.root.1 since it does not exist
[2025-11-26 07:52:22] 2025-11-26 12:51:42,309 | INFO     | time since job start (25628s) is within the limit (172800.0s)
[2025-11-26 07:52:22] 2025-11-26 12:51:42,312 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 07:52:22] 2025-11-26 12:51:42,313 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 07:52:22] 2025-11-26 12:51:42,313 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 07:52:22] 2025-11-26 12:51:42,313 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 07:52:22] 2025-11-26 12:51:42,313 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 07:52:22] 2025-11-26 12:51:42,314 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 07:52:22] 2025-11-26 12:51:42,314 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 07:52:22] 2025-11-26 12:51:42,314 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 07:52:22] 2025-11-26 12:51:42,314 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 07:52:22] 2025-11-26 12:51:42,314 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 07:52:22] 2025-11-26 12:51:42,315 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 07:52:22] 2025-11-26 12:51:42,315 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 07:52:22] 2025-11-26 12:51:42,315 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 07:52:22] 2025-11-26 12:51:42,315 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 07:52:22] 2025-11-26 12:51:42,315 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 07:52:22] 2025-11-26 12:51:42,316 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 07:52:22] 2025-11-26 12:51:42,316 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 07:52:22] 2025-11-26 12:51:42,316 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 07:52:22] 2025-11-26 12:51:42,316 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 07:52:22] 2025-11-26 12:51:42,317 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 07:52:22] 2025-11-26 12:51:42,317 | INFO     | job 6891572230 has completed (purged errors)
[2025-11-26 07:52:22] 2025-11-26 12:51:42,317 | INFO     | overall cleanup function is called
[2025-11-26 07:52:22] 2025-11-26 12:51:42,400 | INFO     | number of running child processes to parent process 5195: 1
[2025-11-26 07:52:22] 2025-11-26 12:51:42,400 | INFO     | maximum number of monitored processes: 18
[2025-11-26 07:52:22] 2025-11-26 12:51:42,401 | INFO     | aborting job monitoring since job object (job id=6891572230) has expired
[2025-11-26 07:52:22] 2025-11-26 12:51:43,341 | INFO     | --- collectZombieJob: --- 10, [5195]
[2025-11-26 07:52:22] 2025-11-26 12:51:43,341 | INFO     | zombie collector waiting for pid 5195
[2025-11-26 07:52:22] 2025-11-26 12:51:43,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 07:52:22] 2025-11-26 12:51:43,342 | INFO     | collected zombie processes
[2025-11-26 07:52:22] 2025-11-26 12:51:43,342 | INFO     | will attempt to kill all subprocesses of pid=5195
[2025-11-26 07:52:22] 2025-11-26 12:51:43,433 | INFO     | process IDs to be killed: [5195] (in reverse order)
[2025-11-26 07:52:22] 2025-11-26 12:51:43,483 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 07:52:22] 2025-11-26 12:51:43,484 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 07:52:22] 2025-11-26 12:51:43,488 | INFO     | did not find any defunct processes belonging to 5195
[2025-11-26 07:52:22] 2025-11-26 12:51:43,491 | INFO     | did not find any defunct processes belonging to 5195
[2025-11-26 07:52:22] 2025-11-26 12:51:43,494 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 07:52:22] 2025-11-26 12:51:43,494 | INFO     | ready for new job
[2025-11-26 07:52:22] 2025-11-26 12:51:43,494 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 07:52:22] 2025-11-26 12:51:43,496 | INFO     | ***************************************
[2025-11-26 07:52:22] 2025-11-26 12:51:43,496 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 07:52:22] 2025-11-26 12:51:43,496 | INFO     | ***************************************
[2025-11-26 07:52:22] 2025-11-26 12:51:43,497 | INFO     | 
[2025-11-26 07:52:22] 2025-11-26 12:51:43,497 | INFO     | architecture information:
[2025-11-26 07:52:22] 2025-11-26 12:51:43,498 | INFO     | executing command: cat /etc/os-release
[2025-11-26 07:52:22] 2025-11-26 12:51:43,511 | INFO     | cat /etc/os-release:
[2025-11-26 07:52:22] NAME="CentOS Linux"
[2025-11-26 07:52:22] VERSION="7 (Core)"
[2025-11-26 07:52:22] ID="centos"
[2025-11-26 07:52:22] ID_LIKE="rhel fedora"
[2025-11-26 07:52:22] VERSION_ID="7"
[2025-11-26 07:52:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 07:52:22] ANSI_COLOR="0;31"
[2025-11-26 07:52:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 07:52:22] HOME_URL="https://www.centos.org/"
[2025-11-26 07:52:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 07:52:22] 
[2025-11-26 07:52:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 07:52:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 07:52:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 07:52:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 07:52:22] 
[2025-11-26 07:52:22] 2025-11-26 12:51:43,512 | INFO     | ***************************************
[2025-11-26 07:52:22] 2025-11-26 12:51:44,015 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 07:52:22] 2025-11-26 12:51:44,032 | INFO     | sufficient remaining disk space (28394389504 B)
[2025-11-26 07:52:22] 2025-11-26 12:51:44,033 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 07:52:22] 2025-11-26 12:51:44,033 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 07:52:22] 2025-11-26 12:51:44,033 | INFO     | update_server=False
[2025-11-26 07:52:22] 2025-11-26 12:51:44,033 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 07:52:22] 2025-11-26 12:51:44,034 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:52:22] 2025-11-26 12:51:44,034 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 07:52:22] 2025-11-26 12:51:44,034 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 07:52:22] 2025-11-26 12:51:44,035 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 07:52:22] 2025-11-26 12:51:44,035 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 07:52:22] 2025-11-26 12:51:44,035 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:52:22] 2025-11-26 12:51:44,035 | INFO     | aborting loop
[2025-11-26 07:52:22] 2025-11-26 12:51:44,250 | INFO     | all payload control threads have been joined
[2025-11-26 07:52:22] 2025-11-26 12:51:44,439 | INFO     | all data control threads have been joined
[2025-11-26 07:52:22] 2025-11-26 12:51:45,034 | INFO     | [job] retrieve thread has finished
[2025-11-26 07:52:22] 2025-11-26 12:51:45,039 | INFO     | [job] queue monitor thread has finished
[2025-11-26 07:52:22] 2025-11-26 12:51:45,041 | INFO     | [job] job monitor thread has finished
[2025-11-26 07:52:22] 2025-11-26 12:51:45,173 | INFO     | [payload] failed_post thread has finished
[2025-11-26 07:52:22] 2025-11-26 12:51:45,221 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 07:52:22] 2025-11-26 12:51:45,266 | INFO     | [payload] control thread has finished
[2025-11-26 07:52:22] 2025-11-26 12:51:45,366 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 07:52:22] 2025-11-26 12:51:45,398 | INFO     | all job control threads have been joined
[2025-11-26 07:52:22] 2025-11-26 12:51:45,442 | INFO     | [job] validate thread has finished
[2025-11-26 07:52:22] 2025-11-26 12:51:45,444 | INFO     | [data] control thread has finished
[2025-11-26 07:52:22] 2025-11-26 12:51:45,672 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 07:52:22] 2025-11-26 12:51:45,874 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 07:52:22] 2025-11-26 12:51:46,212 | INFO     | [data] copytool_in thread has finished
[2025-11-26 07:52:22] 2025-11-26 12:51:46,310 | INFO     | [payload] validate_post thread has finished
[2025-11-26 07:52:22] 2025-11-26 12:51:46,403 | INFO     | [job] control thread has finished
[2025-11-26 07:52:22] 2025-11-26 12:51:46,950 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 07:52:22] 2025-11-26 12:51:47,371 | INFO     | [data] copytool_out thread has finished
[2025-11-26 07:52:22] 2025-11-26 12:51:50,956 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 07:52:22] 2025-11-26 12:51:54,240 | INFO     | job.realtimelogging is not enabled
[2025-11-26 07:52:22] 2025-11-26 12:51:55,245 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 07:52:22] 2025-11-26 12:52:16,486 | INFO     | [monitor] cgroup control has ended
[2025-11-26 07:52:22] 2025-11-26 12:52:17,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140562866587456)>', '<ExcThread(monitor, started 140562023819008)>']
[2025-11-26 07:52:22] 2025-11-26 12:52:18,198 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 07:52:22] 2025-11-26 12:52:18,198 | INFO     | [monitor] control thread has ended
[2025-11-26 07:52:22] 2025-11-26 12:52:22,664 | INFO     | all workflow threads have been joined
[2025-11-26 07:52:22] 2025-11-26 12:52:22,664 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 07:52:22] 2025-11-26 12:52:22,665 | INFO     | traces error code: 0
[2025-11-26 07:52:22] 2025-11-26 12:52:22,665 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 07:52:22] 2025-11-26 12:52:22,755 [wrapper] ==== pilot stdout END ====
[2025-11-26 07:52:22] 2025-11-26 12:52:22,758 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 07:52:22] 2025-11-26 12:52:22,762 [wrapper] pilotpid: 31120
[2025-11-26 07:52:22] 2025-11-26 12:52:22,766 [wrapper] Pilot exit status: 0
[2025-11-26 07:52:22] 2025-11-26 12:52:22,780 [wrapper] pandaids: 6891572230
[2025-11-26 07:52:22] 2025-11-26 12:52:22,822 [wrapper] cleanup supervisor_pilot 23443 31121
[2025-11-26 07:52:22] 2025-11-26 12:52:22,826 [wrapper] Test setup, not cleaning
[2025-11-26 07:52:22] 2025-11-26 12:52:22,830 [wrapper] apfmon messages muted
[2025-11-26 07:52:22] 2025-11-26 12:52:22,833 [wrapper] ==== wrapper stdout END ====
[2025-11-26 07:52:22] 2025-11-26 12:52:22,837 [wrapper] ==== wrapper stderr END ====
[2025-11-26 07:52:22]  *** Error codes and diagnostics ***
[2025-11-26 07:52:22]     "exeErrorCode": 0,
[2025-11-26 07:52:22]     "exeErrorDiag": "",
[2025-11-26 07:52:22]     "pilotErrorCode": 0,
[2025-11-26 07:52:22]     "pilotErrorDiag": "",
[2025-11-26 07:52:22]  *** Listing of results directory ***
[2025-11-26 07:52:22] total 1308688
[2025-11-26 07:52:22] -rw-r--r-- 1 boincer umatlas    576529 Nov 18 10:47 pilot3.tar.gz
[2025-11-26 07:52:22] -rwx------ 1 boincer umatlas     36292 Nov 18 11:19 runpilot2-wrapper.sh
[2025-11-26 07:52:22] -rw-r--r-- 1 boincer umatlas      5112 Nov 18 11:19 queuedata.json
[2025-11-26 07:52:22] -rw-r--r-- 1 boincer umatlas       100 Nov 26 00:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 07:52:22] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 00:44 run_atlas
[2025-11-26 07:52:22] -rw-r--r-- 1 boincer umatlas       105 Nov 26 00:44 job.xml
[2025-11-26 07:52:22] -rw-r--r-- 2 boincer umatlas 406673002 Nov 26 00:44 EVNT.47493065._000335.pool.root.1
[2025-11-26 07:52:22] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 00:44 start_atlas.sh
[2025-11-26 07:52:22] drwxrwx--x 2 boincer umatlas      4096 Nov 26 00:44 shared
[2025-11-26 07:52:22] -rw-r--r-- 2 boincer umatlas    590100 Nov 26 00:44 input.tar.gz
[2025-11-26 07:52:22] -rw-r--r-- 1 boincer umatlas         0 Nov 26 00:44 boinc_lockfile
[2025-11-26 07:52:22] -rw-r--r-- 1 boincer umatlas      2772 Nov 26 00:44 pandaJob.out
[2025-11-26 07:52:22] -rw------- 1 boincer umatlas    991877 Nov 26 00:44 agis_schedconf.cvmfs.json
[2025-11-26 07:52:22] drwx------ 5 boincer umatlas      4096 Nov 26 00:44 pilot3
[2025-11-26 07:52:22] -rw-r--r-- 1 boincer umatlas       532 Nov 26 07:45 boinc_task_state.xml
[2025-11-26 07:52:22] -rw-r--r-- 1 boincer umatlas      5956 Nov 26 07:46 init_data.xml
[2025-11-26 07:52:22] -rw------- 1 boincer umatlas 918016382 Nov 26 07:50 HITS.47493068._003347.pool.root.1
[2025-11-26 07:52:22] -rw------- 1 boincer umatlas      1062 Nov 26 07:51 memory_monitor_summary.json
[2025-11-26 07:52:22] -rw------- 1 boincer umatlas   1516240 Nov 26 07:51 agis_ddmendpoints.agis.ALL.json
[2025-11-26 07:52:22] -rw------- 1 boincer umatlas   2163744 Nov 26 07:51 log.47493068._003347.job.log.tgz.1
[2025-11-26 07:52:22] -rw------- 1 boincer umatlas      8668 Nov 26 07:51 heartbeat.json
[2025-11-26 07:52:22] -rw------- 1 boincer umatlas        95 Nov 26 07:51 pilot_heartbeat.json
[2025-11-26 07:52:22] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 07:52 boinc_mmap_file
[2025-11-26 07:52:22] -rw-r--r-- 1 boincer umatlas        29 Nov 26 07:52 wrapper_checkpoint.txt
[2025-11-26 07:52:22] -rw------- 1 boincer umatlas      4624 Nov 26 07:52 pilotlog.txt
[2025-11-26 07:52:22] -rw------- 1 boincer umatlas   3579895 Nov 26 07:52 log.47493068._003347.job.log.1
[2025-11-26 07:52:22] -rw------- 1 boincer umatlas       353 Nov 26 07:52 output.list
[2025-11-26 07:52:22] -rw-r--r-- 1 boincer umatlas       620 Nov 26 07:52 runtime_log
[2025-11-26 07:52:22] -rw------- 1 boincer umatlas   5765120 Nov 26 07:52 result.tar.gz
[2025-11-26 07:52:22] -rw------- 1 boincer umatlas       670 Nov 26 07:52 z8RLDmTbdf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDTFKDmSfd7en.diag
[2025-11-26 07:52:22] -rw-r--r-- 1 boincer umatlas      8706 Nov 26 07:52 runtime_log.err
[2025-11-26 07:52:22] -rw-r--r-- 1 boincer umatlas     21485 Nov 26 07:52 stderr.txt
[2025-11-26 07:52:22] HITS file was successfully produced:
[2025-11-26 07:52:22] -rw------- 1 boincer umatlas 918016382 Nov 26 07:50 shared/HITS.pool.root.1
[2025-11-26 07:52:22]  *** Contents of shared directory: ***
[2025-11-26 07:52:22] total 1299880
[2025-11-26 07:52:22] -rw-r--r-- 2 boincer umatlas 406673002 Nov 26 00:44 ATLAS.root_0
[2025-11-26 07:52:22] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 00:44 start_atlas.sh
[2025-11-26 07:52:22] -rw-r--r-- 2 boincer umatlas    590100 Nov 26 00:44 input.tar.gz
[2025-11-26 07:52:22] -rw------- 1 boincer umatlas 918016382 Nov 26 07:50 HITS.pool.root.1
[2025-11-26 07:52:22] -rw------- 1 boincer umatlas   5765120 Nov 26 07:52 result.tar.gz
07:52:24 (27337): run_atlas exited; CPU time 288080.486257
07:52:24 (27337): called boinc_finish(0)

</stderr_txt>
]]>

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