Stderr output

<core_client_version>8.2.7</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-26 01:14:33 (17084): vboxwrapper version 26210
2025-11-26 01:14:33 (17084): BOINC client version: 8.2.7
2025-11-26 01:14:33 (17084): Detected: VirtualBox VboxManage Interface (Version: 7.2.0)
2025-11-26 01:14:33 (17084): Successfully copied 'init_data.xml' to the shared directory.
2025-11-26 01:14:34 (17084): Create VM. (boinc_0a956109459ea1d5, slot#2)
2025-11-26 01:14:34 (17084): Setting Memory Size for VM. (4300MB)
2025-11-26 01:14:34 (17084): Setting CPU Count for VM. (3)
2025-11-26 01:14:35 (17084): Setting Chipset Options for VM.
2025-11-26 01:14:35 (17084): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-26 01:14:35 (17084): Setting Boot Options for VM.
2025-11-26 01:14:36 (17084): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-26 01:14:36 (17084): Enabling VM Network Access.
2025-11-26 01:14:36 (17084): Disabling USB Support for VM.
2025-11-26 01:14:37 (17084): Disabling COM Port Support for VM.
2025-11-26 01:14:37 (17084): Disabling LPT Port Support for VM.
2025-11-26 01:14:37 (17084): Disabling Audio Support for VM.
2025-11-26 01:14:37 (17084): Disabling Clipboard Support for VM.
2025-11-26 01:14:38 (17084): Disabling Drag and Drop Support for VM.
2025-11-26 01:14:38 (17084): Adding storage controller(s) to VM.
2025-11-26 01:14:38 (17084): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-26 01:14:39 (17084): Adding VirtualBox Guest Additions to VM.
2025-11-26 01:14:39 (17084): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-26 01:14:39 (17084): forwarding host port 65318 to guest port 80
2025-11-26 01:14:39 (17084): Enabling remote desktop for VM.
2025-11-26 01:14:40 (17084): Enabling shared directory for VM.
2025-11-26 01:14:41 (17084): Starting VM using VBoxManage interface. (boinc_0a956109459ea1d5, slot#2)
2025-11-26 01:14:45 (17084): Successfully started VM. (PID = '23148')
2025-11-26 01:14:45 (17084): Reporting VM Process ID to BOINC.
2025-11-26 01:14:45 (17084): Guest Log: BIOS: VirtualBox 7.2.0
2025-11-26 01:14:45 (17084): Guest Log: CPUID EDX: 0x178bfbff
2025-11-26 01:14:45 (17084): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-26 01:14:45 (17084): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-26 01:14:45 (17084): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-26 01:14:45 (17084): Detected: Web Application Enabled (http://localhost:65318)
2025-11-26 01:14:45 (17084): Detected: Remote Desktop Enabled (localhost:65319)
2025-11-26 01:14:45 (17084): Preference change detected
2025-11-26 01:14:45 (17084): Setting CPU throttle for VM. (100%)
2025-11-26 01:14:46 (17084): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-26 01:14:47 (17084): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-26 01:14:47 (17084): Guest Log: BIOS: Booting from Hard Disk...
2025-11-26 01:14:49 (17084): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-26 01:14:49 (17084): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-26 01:14:49 (17084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-26 01:15:08 (17084): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-26 01:15:08 (17084): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-26 01:15:12 (17084): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-26 01:15:12 (17084): Guest Log: 00:00:00.000118 main     Log opened 2025-11-26T01:15:10.412428000Z
2025-11-26 01:15:12 (17084): Guest Log: 00:00:00.000204 main     OS Product: Linux
2025-11-26 01:15:12 (17084): Guest Log: 00:00:00.000221 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-26 01:15:12 (17084): Guest Log: 00:00:00.000234 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-26 01:15:12 (17084): Guest Log: 00:00:00.000247 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-26 01:15:12 (17084): Guest Log: 00:00:00.000248 main     Process ID: 1289
2025-11-26 01:15:12 (17084): Guest Log: 00:00:00.000248 main     Package type: LINUX_64BITS_GENERIC
2025-11-26 01:15:12 (17084): Guest Log: 00:00:00.000693 main     5.2.32 r132073 started. Verbose level = 0
2025-11-26 01:15:12 (17084): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-26 01:15:12 (17084): Guest Log: [INFO] Mounting shared directory
2025-11-26 01:15:12 (17084): Guest Log: [INFO] Checking for init_data.xml
2025-11-26 01:15:22 (17084): Guest Log: 00:00:10.002470 timesync vgsvcTimeSyncWorker: Radical guest time change: 17 996 192 221 000ns (GuestNow=1 764 137 706 605 985 000 ns GuestLast=1 764 119 710 413 764 000 ns fSetTimeLastLoop=true )
2025-11-26 01:15:36 (17084): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-26 01:15:36 (17084): Guest Log: [INFO] Detected branch: prod
2025-11-26 01:15:36 (17084): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-26 01:15:36 (17084): Guest Log: Copying input files
2025-11-26 01:15:37 (17084): Guest Log: Copied input files into RunAtlas.
2025-11-26 01:15:37 (17084): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-26 01:15:37 (17084): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-26 01:15:37 (17084): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-26 01:15:37 (17084): Guest Log: Further information can be found at the LHC@home message board.
2025-11-26 01:15:45 (17084): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-26 01:15:45 (17084): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-26 01:15:45 (17084): Guest Log: 2.6.3.0 1569 0 32332 153312 4 1 3120538 4096000 0 65024 0 0 n/a 1292 1575 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-26 01:15:46 (17084): Guest Log: copied the webapp to /var/www
2025-11-26 01:15:46 (17084): Guest Log: ATHENA_PROC_NUMBER=3
2025-11-26 01:15:46 (17084): Guest Log: ATHENA_CORE_NUMBER=3
2025-11-26 01:15:46 (17084): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-26 01:15:46 (17084): Guest Log:  *** Starting ATLAS job. (PandaID=6896764149 taskID=47556185) ***
2025-11-26 02:54:48 (17084): Status Report: Elapsed Time: '6000.000000'
2025-11-26 02:54:48 (17084): Status Report: CPU Time: '16708.437500'
2025-11-26 04:34:50 (17084): Status Report: Elapsed Time: '12000.000000'
2025-11-26 04:34:50 (17084): Status Report: CPU Time: '34642.859375'
2025-11-26 06:14:52 (17084): Status Report: Elapsed Time: '18000.000000'
2025-11-26 06:14:52 (17084): Status Report: CPU Time: '52582.359375'
2025-11-26 07:54:55 (17084): Status Report: Elapsed Time: '24000.000000'
2025-11-26 07:54:55 (17084): Status Report: CPU Time: '70522.953125'
2025-11-26 09:34:57 (17084): Status Report: Elapsed Time: '30000.000000'
2025-11-26 09:34:57 (17084): Status Report: CPU Time: '88461.890625'
2025-11-26 11:14:59 (17084): Status Report: Elapsed Time: '36000.000000'
2025-11-26 11:14:59 (17084): Status Report: CPU Time: '106398.953125'
2025-11-26 12:55:02 (17084): Status Report: Elapsed Time: '42000.000000'
2025-11-26 12:55:02 (17084): Status Report: CPU Time: '124338.859375'
2025-11-26 14:35:04 (17084): Status Report: Elapsed Time: '48000.000000'
2025-11-26 14:35:04 (17084): Status Report: CPU Time: '142279.140625'
2025-11-26 16:15:06 (17084): Status Report: Elapsed Time: '54000.000000'
2025-11-26 16:15:06 (17084): Status Report: CPU Time: '160209.578125'
2025-11-26 17:55:09 (17084): Status Report: Elapsed Time: '60000.000000'
2025-11-26 17:55:09 (17084): Status Report: CPU Time: '178152.828125'
2025-11-26 19:35:11 (17084): Status Report: Elapsed Time: '66000.000000'
2025-11-26 19:35:11 (17084): Status Report: CPU Time: '196097.843750'
2025-11-26 20:35:16 (17084): Guest Log:  *** Job finished ***
2025-11-26 20:35:16 (17084): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-26 20:35:16 (17084): Guest Log: 2025-11-27 01:34:41,757 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-26 20:35:16 (17084): Guest Log: 2025-11-27 01:34:41,757 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-26 20:35:16 (17084): Guest Log: 2025-11-27 01:34:43,763 | INFO     | [monitor] cgroup control has ended
2025-11-26 20:35:16 (17084): Guest Log: 2025-11-27 01:34:45,765 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140228484867904)>', '<ExcThread(monitor, started 140227913963264)>']
2025-11-26 20:35:16 (17084): Guest Log: 2025-11-27 01:34:45,767 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-26 20:35:16 (17084): Guest Log: 2025-11-27 01:34:45,767 | INFO     | [monitor] control thread has ended
2025-11-26 20:35:16 (17084): Guest Log: 2025-11-27 01:34:50,772 | INFO     | all workflow threads have been joined
2025-11-26 20:35:16 (17084): Guest Log: 2025-11-27 01:34:50,772 | INFO     | end of generic workflow (traces error code: 0)
2025-11-26 20:35:16 (17084): Guest Log: 2025-11-27 01:34:50,772 | INFO     | traces error code: 0
2025-11-26 20:35:16 (17084): Guest Log: 2025-11-27 01:34:50,772 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-26 20:35:16 (17084): Guest Log: 2025-11-27 01:34:50,878 [wrapper] ==== pilot stdout END ====
2025-11-26 20:35:16 (17084): Guest Log: 2025-11-27 01:34:50,881 [wrapper] ==== wrapper stdout RESUME ====
2025-11-26 20:35:16 (17084): Guest Log: 2025-11-27 01:34:50,884 [wrapper] pilotpid: 5975
2025-11-26 20:35:16 (17084): Guest Log: 2025-11-27 01:34:50,886 [wrapper] Pilot exit status: 0
2025-11-26 20:35:16 (17084): Guest Log: 2025-11-27 01:34:50,895 [wrapper] pandaids: 6896764149
2025-11-26 20:35:16 (17084): Guest Log: 2025-11-27 01:34:50,913 [wrapper] cleanup supervisor_pilot 10965 5976
2025-11-26 20:35:16 (17084): Guest Log: 2025-11-27 01:34:50,916 [wrapper] Test setup, not cleaning
2025-11-26 20:35:16 (17084): Guest Log: 2025-11-27 01:34:50,919 [wrapper] apfmon messages muted
2025-11-26 20:35:16 (17084): Guest Log: 2025-11-27 01:34:50,922 [wrapper] ==== wrapper stdout END ====
2025-11-26 20:35:16 (17084): Guest Log: 2025-11-27 01:34:50,925 [wrapper] ==== wrapper stderr END ====
2025-11-26 20:35:16 (17084): Guest Log:  *** Error codes and diagnostics ***
2025-11-26 20:35:16 (17084): Guest Log:     "exeErrorCode": 0,
2025-11-26 20:35:16 (17084): Guest Log:     "exeErrorDiag": "",
2025-11-26 20:35:16 (17084): Guest Log:     "pilotErrorCode": 0,
2025-11-26 20:35:16 (17084): Guest Log:     "pilotErrorDiag": "",
2025-11-26 20:35:16 (17084): Guest Log:  *** Listing of results directory ***
2025-11-26 20:35:16 (17084): Guest Log: total 916800
2025-11-26 20:35:16 (17084): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 25 08:00 pilot3.tar.gz
2025-11-26 20:35:16 (17084): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 25 08:29 queuedata.json
2025-11-26 20:35:16 (17084): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 25 08:31 runpilot2-wrapper.sh
2025-11-26 20:35:16 (17084): Guest Log: -rwxr-xr-x. 1 atlas atlas     10550 Nov 26 06:15 init_data.xml
2025-11-26 20:35:16 (17084): Guest Log: -rwxr-xr-x. 1 atlas atlas    590108 Nov 26 06:15 input.tar.gz
2025-11-26 20:35:16 (17084): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 26 06:15 start_atlas.sh
2025-11-26 20:35:16 (17084): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 26 06:15 EVNT.47483658._004249.pool.root.1 -> /data/./ATLAS.root_0
2025-11-26 20:35:16 (17084): Guest Log: -rw-r--r--. 1 atlas atlas      2784 Nov 26 06:15 pandaJob.out
2025-11-26 20:35:16 (17084): Guest Log: -rw-------. 1 atlas atlas    991877 Nov 26 06:16 agis_schedconf.cvmfs.json
2025-11-26 20:35:16 (17084): Guest Log: drwx------. 5 atlas atlas      4096 Nov 26 06:16 pilot3
2025-11-26 20:35:16 (17084): Guest Log: -rw-------. 1 atlas atlas 912913332 Nov 27 01:33 HITS.47556185._000123.pool.root.1
2025-11-26 20:35:16 (17084): Guest Log: -rw-------. 1 atlas atlas      1040 Nov 27 01:33 memory_monitor_summary.json
2025-11-26 20:35:16 (17084): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 27 01:34 agis_ddmendpoints.agis.ALL.json
2025-11-26 20:35:16 (17084): Guest Log: -rw-------. 1 atlas atlas   1672541 Nov 27 01:34 log.47556185._000123.job.log.tgz.1
2025-11-26 20:35:16 (17084): Guest Log: -rw-------. 1 atlas atlas      8669 Nov 27 01:34 heartbeat.json
2025-11-26 20:35:16 (17084): Guest Log: -rw-------. 1 atlas atlas        95 Nov 27 01:34 pilot_heartbeat.json
2025-11-26 20:35:16 (17084): Guest Log: -rw-------. 1 atlas atlas      4991 Nov 27 01:34 pilotlog.txt
2025-11-26 20:35:16 (17084): Guest Log: -rw-------. 1 atlas atlas   9349101 Nov 27 01:34 log.47556185._000123.job.log.1
2025-11-26 20:35:16 (17084): Guest Log: -rw-------. 1 atlas atlas       353 Nov 27 01:34 output.list
2025-11-26 20:35:16 (17084): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 27 01:34 runtime_log
2025-11-26 20:35:16 (17084): Guest Log: -rw-------. 1 atlas atlas  11038720 Nov 27 01:34 result.tar.gz
2025-11-26 20:35:16 (17084): Guest Log: -rw-------. 1 atlas atlas       658 Nov 27 01:34 Y5kMDmbd3h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZOJKDmQ9dZAo.diag
2025-11-26 20:35:16 (17084): Guest Log: -rw-r--r--. 1 atlas atlas      8738 Nov 27 01:34 runtime_log.err
2025-11-26 20:35:16 (17084): Guest Log: Looking for outputfile HITS.47556185._000123.pool.root.1
2025-11-26 20:35:16 (17084): Guest Log: HITS file was successfully produced
2025-11-26 20:35:16 (17084): Guest Log: -rw-------. 1 atlas atlas 912913332 Nov 27 01:33 /home/atlas/RunAtlas/HITS.47556185._000123.pool.root.1
2025-11-26 20:35:18 (17084): Guest Log: Successfully finished the ATLAS job!
2025-11-26 20:35:18 (17084): Guest Log: Copying the results back to the shared directory!
2025-11-26 20:35:18 (17084): Guest Log:  *** Contents of shared directory: ***
2025-11-26 20:35:18 (17084): Guest Log: total 1303060
2025-11-26 20:35:18 (17084): Guest Log: -rwxrwxrwx. 1 root root 409754507 Nov 26 06:14 ATLAS.root_0
2025-11-26 20:35:18 (17084): Guest Log: -rwxrwxrwx. 1 root root 912913332 Nov 27  2025 HITS.pool.root.1
2025-11-26 20:35:18 (17084): Guest Log: -rwxrwxrwx. 1 root root     10550 Nov 26 06:14 init_data.xml
2025-11-26 20:35:18 (17084): Guest Log: -rwxrwxrwx. 1 root root    590108 Nov 26 06:11 input.tar.gz
2025-11-26 20:35:18 (17084): Guest Log: -rwxrwxrwx. 1 root root  11038720 Nov 27  2025 result.tar.gz
2025-11-26 20:35:18 (17084): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 26 06:11 start_atlas.sh
2025-11-26 20:35:18 (17084): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-26 20:35:18 (17084): VM Completion File Detected.
2025-11-26 20:35:18 (17084): Powering off VM.
2025-11-26 20:35:19 (17084): Successfully stopped VM.
2025-11-26 20:35:19 (17084): Deregistering VM. (boinc_0a956109459ea1d5, slot#2)
2025-11-26 20:35:19 (17084): Removing network bandwidth throttle group from VM.
2025-11-26 20:35:19 (17084): Removing VM from VirtualBox.
2025-11-26 20:35:24 (17084): called boinc_finish(0)

</stderr_txt>
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