Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-28 14:53:05 (6532): vboxwrapper version 26210
2025-11-28 14:53:05 (6532): BOINC client version: 8.2.4
2025-11-28 14:53:06 (6532): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-11-28 14:53:06 (6532): Successfully copied 'init_data.xml' to the shared directory.
2025-11-28 14:53:06 (6532): Create VM. (boinc_3d5633b4f669abc3, slot#3)
2025-11-28 14:53:07 (6532): Setting Memory Size for VM. (4800MB)
2025-11-28 14:53:07 (6532): Setting CPU Count for VM. (8)
2025-11-28 14:53:07 (6532): Setting Chipset Options for VM.
2025-11-28 14:53:07 (6532): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-28 14:53:08 (6532): Setting Boot Options for VM.
2025-11-28 14:53:08 (6532): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-28 14:53:08 (6532): Enabling VM Network Access.
2025-11-28 14:53:09 (6532): Disabling USB Support for VM.
2025-11-28 14:53:09 (6532): Disabling COM Port Support for VM.
2025-11-28 14:53:10 (6532): Disabling LPT Port Support for VM.
2025-11-28 14:53:10 (6532): Disabling Audio Support for VM.
2025-11-28 14:53:10 (6532): Disabling Clipboard Support for VM.
2025-11-28 14:53:10 (6532): Disabling Drag and Drop Support for VM.
2025-11-28 14:53:11 (6532): Adding storage controller(s) to VM.
2025-11-28 14:53:11 (6532): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-28 14:53:11 (6532): Adding VirtualBox Guest Additions to VM.
2025-11-28 14:53:12 (6532): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-28 14:53:12 (6532): forwarding host port 55133 to guest port 80
2025-11-28 14:53:12 (6532): Enabling remote desktop for VM.
2025-11-28 14:53:12 (6532): Required extension pack not installed, remote desktop not enabled.
2025-11-28 14:53:12 (6532): Enabling shared directory for VM.
2025-11-28 14:53:13 (6532): Starting VM using VBoxManage interface. (boinc_3d5633b4f669abc3, slot#3)
2025-11-28 14:53:16 (6532): Successfully started VM. (PID = '9828')
2025-11-28 14:53:16 (6532): Reporting VM Process ID to BOINC.
2025-11-28 14:53:16 (6532): Guest Log: BIOS: VirtualBox 6.1.50
2025-11-28 14:53:16 (6532): Guest Log: CPUID EDX: 0x178bfbff
2025-11-28 14:53:16 (6532): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-28 14:53:16 (6532): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-28 14:53:16 (6532): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-28 14:53:16 (6532): Detected: Web Application Enabled (http://localhost:55133)
2025-11-28 14:53:16 (6532): Preference change detected
2025-11-28 14:53:16 (6532): Setting CPU throttle for VM. (95%)
2025-11-28 14:53:16 (6532): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-28 14:53:18 (6532): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-28 14:53:18 (6532): Guest Log: BIOS: Booting from Hard Disk...
2025-11-28 14:53:20 (6532): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-28 14:53:20 (6532): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-28 14:53:20 (6532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-28 14:53:27 (6532): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-28 14:53:27 (6532): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-11-28 14:53:31 (6532): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-28 14:53:31 (6532): Guest Log: 00:00:00.000107 main     Log opened 2025-11-28T14:53:29.306872000Z
2025-11-28 14:53:31 (6532): Guest Log: 00:00:00.000162 main     OS Product: Linux
2025-11-28 14:53:31 (6532): Guest Log: 00:00:00.000180 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-28 14:53:31 (6532): Guest Log: 00:00:00.000192 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-28 14:53:31 (6532): Guest Log: 00:00:00.000204 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-28 14:53:31 (6532): Guest Log: 00:00:00.000205 main     Process ID: 1369
2025-11-28 14:53:31 (6532): Guest Log: 00:00:00.000205 main     Package type: LINUX_64BITS_GENERIC
2025-11-28 14:53:31 (6532): Guest Log: 00:00:00.000737 main     5.2.32 r132073 started. Verbose level = 0
2025-11-28 14:53:31 (6532): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-28 14:53:31 (6532): Guest Log: [INFO] Mounting shared directory
2025-11-28 14:53:31 (6532): Guest Log: [INFO] Checking for init_data.xml
2025-11-28 14:53:37 (6532): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-28 14:53:37 (6532): Guest Log: [INFO] Detected branch: prod
2025-11-28 14:53:37 (6532): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-28 14:53:37 (6532): Guest Log: Copying input files
2025-11-28 14:53:39 (6532): Guest Log: Copied input files into RunAtlas.
2025-11-28 14:53:39 (6532): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-28 14:53:39 (6532): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-28 14:53:39 (6532): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-28 14:53:39 (6532): Guest Log: Further information can be found at the LHC@home message board.
2025-11-28 14:53:41 (6532): Guest Log: 00:00:10.002480 timesync vgsvcTimeSyncWorker: Radical guest time change: -39 588 417 456 000ns (GuestNow=1 764 302 020 890 871 000 ns GuestLast=1 764 341 609 308 327 000 ns fSetTimeLastLoop=true )
2025-11-28 14:53:49 (6532): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-28 14:53:49 (6532): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-28 14:53:49 (6532): Guest Log: 2.6.3.0 1645 0 32200 153395 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-28 14:53:49 (6532): Guest Log: copied the webapp to /var/www
2025-11-28 14:53:49 (6532): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-28 14:53:49 (6532): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-28 14:53:50 (6532): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-28 14:53:50 (6532): Guest Log:  *** Starting ATLAS job. (PandaID=6891571910 taskID=47493068) ***
2025-11-28 16:33:17 (6532): Status Report: Elapsed Time: '6000.000000'
2025-11-28 16:33:17 (6532): Status Report: CPU Time: '41956.999353'
2025-11-28 18:13:19 (6532): Status Report: Elapsed Time: '12000.000000'
2025-11-28 18:13:19 (6532): Status Report: CPU Time: '89854.048784'
2025-11-28 19:53:20 (6532): Status Report: Elapsed Time: '18000.000000'
2025-11-28 19:53:20 (6532): Status Report: CPU Time: '137761.612682'
2025-11-28 21:33:22 (6532): Status Report: Elapsed Time: '24000.000000'
2025-11-28 21:33:22 (6532): Status Report: CPU Time: '185674.137411'
2025-11-28 22:09:35 (6532): Guest Log:  *** Job finished ***
2025-11-28 22:09:35 (6532): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-28 22:09:35 (6532): Guest Log: 2025-11-28 11:09:14,952 | INFO     | [payload] run_realtimelog thread has finished
2025-11-28 22:09:35 (6532): Guest Log: 2025-11-28 11:09:15,007 | INFO     | [payload] control thread has finished
2025-11-28 22:09:35 (6532): Guest Log: 2025-11-28 11:09:17,719 | INFO     | [monitor] cgroup control has ended
2025-11-28 22:09:35 (6532): Guest Log: 2025-11-28 11:09:18,790 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140272077403968)>', '<ExcThread(monitor, started 140271165609728)>']
2025-11-28 22:09:35 (6532): Guest Log: 2025-11-28 11:09:19,216 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-28 22:09:35 (6532): Guest Log: 2025-11-28 11:09:19,216 | INFO     | [monitor] control thread has ended
2025-11-28 22:09:35 (6532): Guest Log: 2025-11-28 11:09:23,796 | INFO     | all workflow threads have been joined
2025-11-28 22:09:35 (6532): Guest Log: 2025-11-28 11:09:23,796 | INFO     | end of generic workflow (traces error code: 0)
2025-11-28 22:09:35 (6532): Guest Log: 2025-11-28 11:09:23,796 | INFO     | traces error code: 0
2025-11-28 22:09:35 (6532): Guest Log: 2025-11-28 11:09:23,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-28 22:09:35 (6532): Guest Log: 2025-11-28 11:09:23,868 [wrapper] ==== pilot stdout END ====
2025-11-28 22:09:35 (6532): Guest Log: 2025-11-28 11:09:23,873 [wrapper] ==== wrapper stdout RESUME ====
2025-11-28 22:09:35 (6532): Guest Log: 2025-11-28 11:09:23,878 [wrapper] pilotpid: 6082
2025-11-28 22:09:35 (6532): Guest Log: 2025-11-28 11:09:23,883 [wrapper] Pilot exit status: 0
2025-11-28 22:09:35 (6532): Guest Log: 2025-11-28 11:09:23,898 [wrapper] pandaids: 6891571910
2025-11-28 22:09:35 (6532): Guest Log: 2025-11-28 11:09:23,928 [wrapper] cleanup supervisor_pilot 28667 6083
2025-11-28 22:09:35 (6532): Guest Log: 2025-11-28 11:09:23,937 [wrapper] Test setup, not cleaning
2025-11-28 22:09:35 (6532): Guest Log: 2025-11-28 11:09:23,942 [wrapper] apfmon messages muted
2025-11-28 22:09:35 (6532): Guest Log: 2025-11-28 11:09:23,947 [wrapper] ==== wrapper stdout END ====
2025-11-28 22:09:35 (6532): Guest Log: 2025-11-28 11:09:23,952 [wrapper] ==== wrapper stderr END ====
2025-11-28 22:09:35 (6532): Guest Log:  *** Error codes and diagnostics ***
2025-11-28 22:09:35 (6532): Guest Log:     "exeErrorCode": 0,
2025-11-28 22:09:35 (6532): Guest Log:     "exeErrorDiag": "",
2025-11-28 22:09:35 (6532): Guest Log:     "pilotErrorCode": 0,
2025-11-28 22:09:35 (6532): Guest Log:     "pilotErrorDiag": "",
2025-11-28 22:09:35 (6532): Guest Log:  *** Listing of results directory ***
2025-11-28 22:09:35 (6532): Guest Log: total 922480
2025-11-28 22:09:35 (6532): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 18 15:47 pilot3.tar.gz
2025-11-28 22:09:35 (6532): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 18 16:03 queuedata.json
2025-11-28 22:09:35 (6532): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 18 16:03 runpilot2-wrapper.sh
2025-11-28 22:09:35 (6532): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Nov 28 03:53 start_atlas.sh
2025-11-28 22:09:35 (6532): Guest Log: -rwxr-xr-x. 1 atlas atlas    590094 Nov 28 03:53 input.tar.gz
2025-11-28 22:09:35 (6532): Guest Log: -rwxr-xr-x. 1 atlas atlas      8648 Nov 28 03:53 init_data.xml
2025-11-28 22:09:35 (6532): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 28 03:53 EVNT.47493065._000311.pool.root.1 -> /data/./ATLAS.root_0
2025-11-28 22:09:35 (6532): Guest Log: -rw-r--r--. 1 atlas atlas      2773 Nov 28 03:53 pandaJob.out
2025-11-28 22:09:35 (6532): Guest Log: -rw-------. 1 atlas atlas    991850 Nov 28 03:54 agis_schedconf.cvmfs.json
2025-11-28 22:09:35 (6532): Guest Log: drwx------. 5 atlas atlas      4096 Nov 28 03:54 pilot3
2025-11-28 22:09:35 (6532): Guest Log: -rw-------. 1 atlas atlas        95 Nov 28 11:08 pilot_heartbeat.json
2025-11-28 22:09:35 (6532): Guest Log: -rw-------. 1 atlas atlas 930330144 Nov 28 11:08 HITS.47493068._003102.pool.root.1
2025-11-28 22:09:35 (6532): Guest Log: -rw-------. 1 atlas atlas      1038 Nov 28 11:08 memory_monitor_summary.json
2025-11-28 22:09:35 (6532): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 28 11:09 agis_ddmendpoints.agis.ALL.json
2025-11-28 22:09:35 (6532): Guest Log: -rw-------. 1 atlas atlas   1728510 Nov 28 11:09 log.47493068._003102.job.log.tgz.1
2025-11-28 22:09:35 (6532): Guest Log: -rw-------. 1 atlas atlas      8653 Nov 28 11:09 heartbeat.json
2025-11-28 22:09:35 (6532): Guest Log: -rw-------. 1 atlas atlas      4612 Nov 28 11:09 pilotlog.txt
2025-11-28 22:09:35 (6532): Guest Log: -rw-------. 1 atlas atlas   3491537 Nov 28 11:09 log.47493068._003102.job.log.1
2025-11-28 22:09:35 (6532): Guest Log: -rw-------. 1 atlas atlas       353 Nov 28 11:09 output.list
2025-11-28 22:09:35 (6532): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 28 11:09 runtime_log
2025-11-28 22:09:35 (6532): Guest Log: -rw-------. 1 atlas atlas   5242880 Nov 28 11:09 result.tar.gz
2025-11-28 22:09:35 (6532): Guest Log: -rw-------. 1 atlas atlas       659 Nov 28 11:09 VTzLDmVMdf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPjFKDmQqfbDm.diag
2025-11-28 22:09:35 (6532): Guest Log: -rw-r--r--. 1 atlas atlas      8637 Nov 28 11:09 runtime_log.err
2025-11-28 22:09:35 (6532): Guest Log: Looking for outputfile HITS.47493068._003102.pool.root.1
2025-11-28 22:09:35 (6532): Guest Log: HITS file was successfully produced
2025-11-28 22:09:35 (6532): Guest Log: -rw-------. 1 atlas atlas 930330144 Nov 28 11:08 /home/atlas/RunAtlas/HITS.47493068._003102.pool.root.1
2025-11-28 22:09:39 (6532): Guest Log: Successfully finished the ATLAS job!
2025-11-28 22:09:39 (6532): Guest Log: Copying the results back to the shared directory!
2025-11-28 22:09:39 (6532): Guest Log:  *** Contents of shared directory: ***
2025-11-28 22:09:39 (6532): Guest Log: total 1315028
2025-11-28 22:09:39 (6532): Guest Log: -rwxrwxrwx. 1 root root 410390002 Nov 28 03:53 ATLAS.root_0
2025-11-28 22:09:39 (6532): Guest Log: -rwxrwxrwx. 1 root root 930330144 Nov 28  2025 HITS.pool.root.1
2025-11-28 22:09:39 (6532): Guest Log: -rwxrwxrwx. 1 root root      8648 Nov 28 03:53 init_data.xml
2025-11-28 22:09:39 (6532): Guest Log: -rwxrwxrwx. 1 root root    590094 Nov 26 05:52 input.tar.gz
2025-11-28 22:09:39 (6532): Guest Log: -rwxrwxrwx. 1 root root   5242880 Nov 28  2025 result.tar.gz
2025-11-28 22:09:39 (6532): Guest Log: -rwxrwxrwx. 1 root root     15120 Nov 26 05:53 start_atlas.sh
2025-11-28 22:09:39 (6532): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-28 22:09:39 (6532): VM Completion File Detected.
2025-11-28 22:09:39 (6532): Powering off VM.
2025-11-28 22:09:39 (6532): Successfully stopped VM.
2025-11-28 22:09:39 (6532): Deregistering VM. (boinc_3d5633b4f669abc3, slot#3)
2025-11-28 22:09:39 (6532): Removing network bandwidth throttle group from VM.
2025-11-28 22:09:39 (6532): Removing VM from VirtualBox.
2025-11-28 22:09:45 (6532): called boinc_finish(0)

</stderr_txt>
]]>

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