Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:18:57 (32133): wrapper (7.7.26015): starting
00:18:57 (32133): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:18:57] Arguments: --nthreads 8
[2025-11-26 00:18:57] Threads: 8
[2025-11-26 00:18:57] Checking for CVMFS
[2025-11-26 00:18:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:18:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:18:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:18:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:18:58] 2.11.2.0 2934 176394 81360 153311 1 71 19925261 20275201 1 130560 1 66445388 99.950 8033054 23145 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:18:58] CVMFS is ok
[2025-11-26 00:18:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:18:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:18:58] Further information can be found at the LHC@home message board.
[2025-11-26 00:18:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:18:58] Checking for apptainer binary...
[2025-11-26 00:18:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:18:58] Running /usr/bin/apptainer --version
[2025-11-26 00:18:58] apptainer version 1.3.2-1.el7
[2025-11-26 00:18:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:19:00] c-204-33.aglt2.org
[2025-11-26 00:19:00] apptainer works
[2025-11-26 00:19:00] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:19:00] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:19:00] Starting ATLAS job with PandaID=6896764140
[2025-11-26 00:19:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:29:38 (12183): wrapper (7.7.26015): starting
11:29:38 (12183): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 11:29:38] Arguments: --nthreads 8
[2025-11-26 11:29:38] Threads: 8
[2025-11-26 11:29:38] This job has been restarted, cleaning up previous attempt
[2025-11-26 11:29:38] Checking for CVMFS
[2025-11-26 11:29:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 11:29:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 11:29:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 11:29:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 11:29:38] 2.11.2.0 2934 177065 79944 153328 0 1 10636225 20275200 1 130560 1 66660348 99.950 8056616 23171 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 11:29:38] CVMFS is ok
[2025-11-26 11:29:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 11:29:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 11:29:38] Further information can be found at the LHC@home message board.
[2025-11-26 11:29:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 11:29:38] Checking for apptainer binary...
[2025-11-26 11:29:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 11:29:38] Running /usr/bin/apptainer --version
[2025-11-26 11:29:38] apptainer version 1.3.2-1.el7
[2025-11-26 11:29:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 11:29:40] c-204-33.aglt2.org
[2025-11-26 11:29:40] apptainer works
[2025-11-26 11:29:40] Set ATHENA_PROC_NUMBER=8
[2025-11-26 11:29:40] Set ATHENA_CORE_NUMBER=8
[2025-11-26 11:29:40] Starting ATLAS job with PandaID=6896764140
[2025-11-26 11:29:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 00:00:35]  *** The last 200 lines of the pilot log: ***
[2025-11-27 00:00:35] 2025-11-27 05:00:01,520 | INFO     | monitor loop #3311: job 0:6896764140 is in state 'finished'
[2025-11-27 00:00:35] 2025-11-27 05:00:01,520 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:00:35] 2025-11-27 05:00:01,959 | INFO     | time since job start (45003s) is within the limit (172800.0s)
[2025-11-27 00:00:35] 2025-11-27 05:00:02,994 [wrapper] supervise_pilot (15 min periods counter: 51)
[2025-11-27 00:00:35] 2025-11-27 05:00:03,082 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 00:00:35] 2025-11-27 05:00:03,085 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-27 00:00:35] 2025-11-27 05:00:03,087 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896764140/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 00:00:35] 2025-11-27 05:00:03,088 | INFO     | extracted standard info from prmon json
[2025-11-27 00:00:35] 2025-11-27 05:00:03,088 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 00:00:35] 2025-11-27 05:00:03,088 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 00:00:35] 2025-11-27 05:00:03,102 | INFO     | fitting pss+swap vs Time
[2025-11-27 00:00:35] 2025-11-27 05:00:03,103 | INFO     | sum of square deviations: 124131126439.3675
[2025-11-27 00:00:35] 2025-11-27 05:00:03,114 | INFO     | sum of deviations: 802038199969.651
[2025-11-27 00:00:35] 2025-11-27 05:00:03,114 | INFO     | mean x: 1764197078.5345998
[2025-11-27 00:00:35] 2025-11-27 05:00:03,114 | INFO     | mean y: 2872050.44504749
[2025-11-27 00:00:35] 2025-11-27 05:00:03,115 | INFO     | intersect: -11395988894.805046
[2025-11-27 00:00:35] 2025-11-27 05:00:03,115 | INFO     | chi2: 5.766154385848234
[2025-11-27 00:00:35] 2025-11-27 05:00:03,116 | INFO     | sum of square deviations: 121621934442.92905
[2025-11-27 00:00:35] 2025-11-27 05:00:03,127 | INFO     | sum of deviations: 1039683384668.1245
[2025-11-27 00:00:35] 2025-11-27 05:00:03,127 | INFO     | mean x: 1764196926.0382514
[2025-11-27 00:00:35] 2025-11-27 05:00:03,127 | INFO     | mean y: 2886489.566939891
[2025-11-27 00:00:35] 2025-11-27 05:00:03,128 | INFO     | intersect: -15078325955.259363
[2025-11-27 00:00:35] 2025-11-27 05:00:03,128 | INFO     | chi2: 2.713173423656695
[2025-11-27 00:00:35] 2025-11-27 05:00:03,129 | INFO     | current chi2=2.713173423656695 (change=52.946569895603446 %)
[2025-11-27 00:00:35] 2025-11-27 05:00:03,129 | INFO     | sum of square deviations: 119146789596.47035
[2025-11-27 00:00:35] 2025-11-27 05:00:03,140 | INFO     | sum of deviations: 1093336008837.9836
[2025-11-27 00:00:35] 2025-11-27 05:00:03,140 | INFO     | mean x: 1764196773.5419533
[2025-11-27 00:00:35] 2025-11-27 05:00:03,141 | INFO     | mean y: 2889785.6726272353
[2025-11-27 00:00:35] 2025-11-27 05:00:03,141 | INFO     | intersect: -16186047119.148085
[2025-11-27 00:00:35] 2025-11-27 05:00:03,141 | INFO     | chi2: 2.4062832808680334
[2025-11-27 00:00:35] 2025-11-27 05:00:03,142 | INFO     | current chi2=2.4062832808680334 (change=11.311114140836914 %)
[2025-11-27 00:00:35] 2025-11-27 05:00:03,142 | INFO     | right removable region: 726
[2025-11-27 00:00:35] 2025-11-27 05:00:03,143 | INFO     | sum of square deviations: 121621694102.92928
[2025-11-27 00:00:35] 2025-11-27 05:00:03,154 | INFO     | sum of deviations: 602635284434.2291
[2025-11-27 00:00:35] 2025-11-27 05:00:03,154 | INFO     | mean x: 1764197231.0382514
[2025-11-27 00:00:35] 2025-11-27 05:00:03,154 | INFO     | mean y: 2884146.7418032787
[2025-11-27 00:00:35] 2025-11-27 05:00:03,154 | INFO     | intersect: -8738710089.110971
[2025-11-27 00:00:35] 2025-11-27 05:00:03,155 | INFO     | chi2: 3.5047890989111963
[2025-11-27 00:00:35] 2025-11-27 05:00:03,155 | INFO     | current chi2=3.5047890989111963 (change=39.217910857313576 %)
[2025-11-27 00:00:35] 2025-11-27 05:00:03,156 | INFO     | sum of square deviations: 119146487280.78387
[2025-11-27 00:00:35] 2025-11-27 05:00:03,167 | INFO     | sum of deviations: 560116577700.9957
[2025-11-27 00:00:35] 2025-11-27 05:00:03,167 | INFO     | mean x: 1764197383.536451
[2025-11-27 00:00:35] 2025-11-27 05:00:03,167 | INFO     | mean y: 2886765.2077028886
[2025-11-27 00:00:35] 2025-11-27 05:00:03,168 | INFO     | intersect: -8290737523.746549
[2025-11-27 00:00:35] 2025-11-27 05:00:03,168 | INFO     | chi2: 3.4637675970225605
[2025-11-27 00:00:35] 2025-11-27 05:00:03,169 | INFO     | current chi2=3.4637675970225605 (change=1.1704413798074054 %)
[2025-11-27 00:00:35] 2025-11-27 05:00:03,169 | INFO     | left removable region: 20
[2025-11-27 00:00:35] 2025-11-27 05:00:03,169 | INFO     | sum of square deviations: 109117076230.54977
[2025-11-27 00:00:35] 2025-11-27 05:00:03,180 | INFO     | sum of deviations: 800392121499.5891
[2025-11-27 00:00:35] 2025-11-27 05:00:03,180 | INFO     | mean x: 1764197353.0453258
[2025-11-27 00:00:35] 2025-11-27 05:00:03,180 | INFO     | mean y: 2907892.4815864023
[2025-11-27 00:00:35] 2025-11-27 05:00:03,180 | INFO     | intersect: -12937776654.128113
[2025-11-27 00:00:35] 2025-11-27 05:00:03,181 | INFO     | chi2: 0.07124248291010574
[2025-11-27 00:00:35] 2025-11-27 05:00:03,181 | INFO     | current memory leak: 7.34 B/s (using 706 data points, chi2=0.07)
[2025-11-27 00:00:35] 2025-11-27 05:00:03,182 | INFO     | could have reported an average CPU frequency of 2169 MHz (28 samples)
[2025-11-27 00:00:35] 2025-11-27 05:00:03,182 | INFO     | ..............................
[2025-11-27 00:00:35] 2025-11-27 05:00:03,182 | INFO     | . Timing measurements:
[2025-11-27 00:00:35] 2025-11-27 05:00:03,182 | INFO     | . get job = 0 s
[2025-11-27 00:00:35] 2025-11-27 05:00:03,182 | INFO     | . initial setup = 2 s
[2025-11-27 00:00:35] 2025-11-27 05:00:03,182 | INFO     | . payload setup = 8 s
[2025-11-27 00:00:35] 2025-11-27 05:00:03,182 | INFO     | . stage-in = 0 s
[2025-11-27 00:00:35] 2025-11-27 05:00:03,183 | INFO     | . payload execution = 44961 s
[2025-11-27 00:00:35] 2025-11-27 05:00:03,183 | INFO     | . stage-out = 3 s
[2025-11-27 00:00:35] 2025-11-27 05:00:03,183 | INFO     | . log creation = 0 s
[2025-11-27 00:00:35] 2025-11-27 05:00:03,183 | INFO     | ..............................
[2025-11-27 00:00:35] 2025-11-27 05:00:03,275 | INFO     | 
[2025-11-27 00:00:35] 2025-11-27 05:00:03,275 | INFO     | job summary report
[2025-11-27 00:00:35] 2025-11-27 05:00:03,275 | INFO     | --------------------------------------------------
[2025-11-27 00:00:35] 2025-11-27 05:00:03,275 | INFO     | PanDA job id: 6896764140
[2025-11-27 00:00:35] 2025-11-27 05:00:03,276 | INFO     | task id: 47556185
[2025-11-27 00:00:35] 2025-11-27 05:00:03,276 | INFO     | errors: (none)
[2025-11-27 00:00:35] 2025-11-27 05:00:03,276 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 00:00:35] 2025-11-27 05:00:03,276 | INFO     | pilot state: finished 
[2025-11-27 00:00:35] 2025-11-27 05:00:03,276 | INFO     | transexitcode: 0
[2025-11-27 00:00:35] 2025-11-27 05:00:03,277 | INFO     | exeerrorcode: 0
[2025-11-27 00:00:35] 2025-11-27 05:00:03,277 | INFO     | exeerrordiag: 
[2025-11-27 00:00:35] 2025-11-27 05:00:03,277 | INFO     | exitcode: 0
[2025-11-27 00:00:35] 2025-11-27 05:00:03,277 | INFO     | exitmsg: OK
[2025-11-27 00:00:35] 2025-11-27 05:00:03,277 | INFO     | cpuconsumptiontime: 348529 s
[2025-11-27 00:00:35] 2025-11-27 05:00:03,277 | INFO     | nevents: 1000
[2025-11-27 00:00:35] 2025-11-27 05:00:03,278 | INFO     | neventsw: 0
[2025-11-27 00:00:35] 2025-11-27 05:00:03,278 | INFO     | pid: 23394
[2025-11-27 00:00:35] 2025-11-27 05:00:03,278 | INFO     | pgrp: 23394
[2025-11-27 00:00:35] 2025-11-27 05:00:03,278 | INFO     | corecount: 8
[2025-11-27 00:00:35] 2025-11-27 05:00:03,278 | INFO     | event service: False
[2025-11-27 00:00:35] 2025-11-27 05:00:03,278 | INFO     | sizes: {0: 2284141, 1: 2284340, 7: 2284602, 12: 2284630, 44974: 2330611, 44979: 2339605, 44980: 2339789, 44988: 2340035}
[2025-11-27 00:00:35] 2025-11-27 05:00:03,279 | INFO     | --------------------------------------------------
[2025-11-27 00:00:35] 2025-11-27 05:00:03,279 | INFO     | 
[2025-11-27 00:00:35] 2025-11-27 05:00:03,279 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 00:00:35] 2025-11-27 05:00:03,308 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 00:00:35] 2025-11-27 05:00:03,308 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 00:00:35] 2025-11-27 05:00:03,309 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 00:00:35] 2025-11-27 05:00:03,309 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 00:00:35] 2025-11-27 05:00:03,309 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 00:00:35] 2025-11-27 05:00:03,309 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 00:00:35] 2025-11-27 05:00:03,309 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 00:00:35] 2025-11-27 05:00:03,310 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 00:00:35] 2025-11-27 05:00:03,310 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 00:00:35] 2025-11-27 05:00:03,310 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 00:00:35] 2025-11-27 05:00:03,310 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 00:00:35] 2025-11-27 05:00:03,310 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 00:00:35] 2025-11-27 05:00:03,311 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 00:00:35] 2025-11-27 05:00:03,311 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 00:00:35] 2025-11-27 05:00:03,311 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 00:00:35] 2025-11-27 05:00:03,311 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 00:00:35] 2025-11-27 05:00:03,311 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 00:00:35] 2025-11-27 05:00:03,311 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 00:00:35] 2025-11-27 05:00:03,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 00:00:35] 2025-11-27 05:00:03,312 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 00:00:35] 2025-11-27 05:00:03,312 | INFO     | job 6896764140 has completed (purged errors)
[2025-11-27 00:00:35] 2025-11-27 05:00:03,312 | INFO     | overall cleanup function is called
[2025-11-27 00:00:35] 2025-11-27 05:00:04,327 | INFO     | --- collectZombieJob: --- 10, [23394]
[2025-11-27 00:00:35] 2025-11-27 05:00:04,327 | INFO     | zombie collector waiting for pid 23394
[2025-11-27 00:00:35] 2025-11-27 05:00:04,328 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 00:00:35] 2025-11-27 05:00:04,328 | INFO     | collected zombie processes
[2025-11-27 00:00:35] 2025-11-27 05:00:04,328 | INFO     | will attempt to kill all subprocesses of pid=23394
[2025-11-27 00:00:35] 2025-11-27 05:00:04,425 | INFO     | process IDs to be killed: [23394] (in reverse order)
[2025-11-27 00:00:35] 2025-11-27 05:00:04,482 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 00:00:35] 2025-11-27 05:00:04,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 00:00:35] 2025-11-27 05:00:04,487 | INFO     | did not find any defunct processes belonging to 23394
[2025-11-27 00:00:35] 2025-11-27 05:00:04,490 | INFO     | did not find any defunct processes belonging to 23394
[2025-11-27 00:00:35] 2025-11-27 05:00:04,493 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 00:00:35] 2025-11-27 05:00:04,493 | INFO     | ready for new job
[2025-11-27 00:00:35] 2025-11-27 05:00:04,493 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 00:00:35] 2025-11-27 05:00:04,497 | INFO     | ***************************************
[2025-11-27 00:00:35] 2025-11-27 05:00:04,497 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 00:00:35] 2025-11-27 05:00:04,497 | INFO     | ***************************************
[2025-11-27 00:00:35] 2025-11-27 05:00:04,497 | INFO     | 
[2025-11-27 00:00:35] 2025-11-27 05:00:04,498 | INFO     | architecture information:
[2025-11-27 00:00:35] 2025-11-27 05:00:04,498 | INFO     | executing command: cat /etc/os-release
[2025-11-27 00:00:35] 2025-11-27 05:00:04,516 | INFO     | cat /etc/os-release:
[2025-11-27 00:00:35] NAME="CentOS Linux"
[2025-11-27 00:00:35] VERSION="7 (Core)"
[2025-11-27 00:00:35] ID="centos"
[2025-11-27 00:00:35] ID_LIKE="rhel fedora"
[2025-11-27 00:00:35] VERSION_ID="7"
[2025-11-27 00:00:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 00:00:35] ANSI_COLOR="0;31"
[2025-11-27 00:00:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 00:00:35] HOME_URL="https://www.centos.org/"
[2025-11-27 00:00:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 00:00:35] 
[2025-11-27 00:00:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 00:00:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 00:00:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 00:00:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 00:00:35] 
[2025-11-27 00:00:35] 2025-11-27 05:00:04,517 | INFO     | ***************************************
[2025-11-27 00:00:35] 2025-11-27 05:00:05,019 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 00:00:35] 2025-11-27 05:00:05,039 | INFO     | sufficient remaining disk space (17478713344 B)
[2025-11-27 00:00:35] 2025-11-27 05:00:05,040 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 00:00:35] 2025-11-27 05:00:05,040 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 00:00:35] 2025-11-27 05:00:05,040 | INFO     | update_server=False
[2025-11-27 00:00:35] 2025-11-27 05:00:05,040 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 00:00:35] 2025-11-27 05:00:05,041 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:00:35] 2025-11-27 05:00:05,041 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 00:00:35] 2025-11-27 05:00:05,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:00:35] 2025-11-27 05:00:05,042 | INFO     | aborting loop
[2025-11-27 00:00:35] 2025-11-27 05:00:05,157 | INFO     | all payload control threads have been joined
[2025-11-27 00:00:35] 2025-11-27 05:00:05,536 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 00:00:35] 2025-11-27 05:00:05,770 | INFO     | all data control threads have been joined
[2025-11-27 00:00:35] 2025-11-27 05:00:06,045 | INFO     | [job] retrieve thread has finished
[2025-11-27 00:00:35] 2025-11-27 05:00:06,047 | INFO     | [job] queue monitor thread has finished
[2025-11-27 00:00:35] 2025-11-27 05:00:06,047 | INFO     | [job] job monitor thread has finished
[2025-11-27 00:00:35] 2025-11-27 05:00:06,113 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 00:00:35] 2025-11-27 05:00:06,163 | INFO     | [payload] control thread has finished
[2025-11-27 00:00:35] 2025-11-27 05:00:06,185 | INFO     | all job control threads have been joined
[2025-11-27 00:00:35] 2025-11-27 05:00:06,192 | INFO     | [payload] validate_post thread has finished
[2025-11-27 00:00:35] 2025-11-27 05:00:06,235 | INFO     | [payload] failed_post thread has finished
[2025-11-27 00:00:35] 2025-11-27 05:00:06,392 | INFO     | [job] validate thread has finished
[2025-11-27 00:00:35] 2025-11-27 05:00:06,487 | INFO     | [data] copytool_in thread has finished
[2025-11-27 00:00:35] 2025-11-27 05:00:06,773 | INFO     | [data] control thread has finished
[2025-11-27 00:00:35] 2025-11-27 05:00:07,042 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 00:00:35] 2025-11-27 05:00:07,047 | INFO     | [data] copytool_out thread has finished
[2025-11-27 00:00:35] 2025-11-27 05:00:07,190 | INFO     | [job] control thread has finished
[2025-11-27 00:00:35] 2025-11-27 05:00:07,234 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 00:00:35] 2025-11-27 05:00:07,239 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 00:00:35] 2025-11-27 05:00:09,542 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 00:00:35] 2025-11-27 05:00:11,896 | INFO     | [monitor] cgroup control has ended
[2025-11-27 00:00:35] 2025-11-27 05:00:12,468 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140007140792128)>', '<ExcThread(monitor, started 140006169491200)>']
[2025-11-27 00:00:35] 2025-11-27 05:00:17,487 | INFO     | all workflow threads have been joined
[2025-11-27 00:00:35] 2025-11-27 05:00:17,487 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 00:00:35] 2025-11-27 05:00:17,488 | INFO     | traces error code: 0
[2025-11-27 00:00:35] 2025-11-27 05:00:17,488 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 00:00:35] 2025-11-27 05:00:35,188 | INFO     | PID=16823 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 00:00:35] 2025-11-27 05:00:35,189 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 00:00:35] 2025-11-27 05:00:35,189 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 00:00:35] 2025-11-27 05:00:35,189 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 00:00:35] 2025-11-27 05:00:35,189 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 00:00:35] 2025-11-27 05:00:35,189 | INFO     | [monitor] control thread has ended
[2025-11-27 00:00:35] 2025-11-27 05:00:35,302 [wrapper] ==== pilot stdout END ====
[2025-11-27 00:00:35] 2025-11-27 05:00:35,307 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 00:00:35] 2025-11-27 05:00:35,311 [wrapper] pilotpid: 16823
[2025-11-27 00:00:35] 2025-11-27 05:00:35,315 [wrapper] Pilot exit status: 0
[2025-11-27 00:00:35] 2025-11-27 05:00:35,332 [wrapper] pandaids: 6896764140 6896764140
[2025-11-27 00:00:35] 2025-11-27 05:00:35,373 [wrapper] cleanup supervisor_pilot 32599 16824
[2025-11-27 00:00:35] 2025-11-27 05:00:35,379 [wrapper] Test setup, not cleaning
[2025-11-27 00:00:35] 2025-11-27 05:00:35,384 [wrapper] apfmon messages muted
[2025-11-27 00:00:35] 2025-11-27 05:00:35,389 [wrapper] ==== wrapper stdout END ====
[2025-11-27 00:00:35] 2025-11-27 05:00:35,394 [wrapper] ==== wrapper stderr END ====
[2025-11-27 00:00:35]  *** Error codes and diagnostics ***
[2025-11-27 00:00:35]     "exeErrorCode": 0,
[2025-11-27 00:00:35]     "exeErrorDiag": "",
[2025-11-27 00:00:35]     "pilotErrorCode": 0,
[2025-11-27 00:00:35]     "pilotErrorDiag": "",
[2025-11-27 00:00:35]  *** Listing of results directory ***
[2025-11-27 00:00:35] total 1706392
[2025-11-27 00:00:35] drwx------ 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-27 00:00:35] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 03:00 pilot3.tar.gz
[2025-11-27 00:00:35] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 03:27 queuedata.json
[2025-11-27 00:00:35] -rwx------ 1 boincer umatlas     36292 Nov 25 03:29 runpilot2-wrapper.sh
[2025-11-27 00:00:35] -rw-r--r-- 1 boincer umatlas       100 Nov 26 00:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 00:00:35] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 00:18 run_atlas
[2025-11-27 00:00:35] -rw-r--r-- 1 boincer umatlas       105 Nov 26 00:18 job.xml
[2025-11-27 00:00:35] -rw-r--r-- 3 boincer umatlas 409407690 Nov 26 00:18 EVNT.47483658._004248.pool.root.1
[2025-11-27 00:00:35] -rw-r--r-- 3 boincer umatlas 409407690 Nov 26 00:18 ATLAS.root_0
[2025-11-27 00:00:35] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 00:18 start_atlas.sh
[2025-11-27 00:00:35] drwxrwx--x 2 boincer umatlas      4096 Nov 26 00:18 shared
[2025-11-27 00:00:35] -rw-r--r-- 2 boincer umatlas    590103 Nov 26 00:18 input.tar.gz
[2025-11-27 00:00:35] -rw-r--r-- 1 boincer umatlas         0 Nov 26 00:18 boinc_lockfile
[2025-11-27 00:00:35] -rw-r--r-- 1 boincer umatlas      2784 Nov 26 11:29 pandaJob.out
[2025-11-27 00:00:35] -rw------- 1 boincer umatlas        57 Nov 26 11:29 setup.sh.local
[2025-11-27 00:00:35] -rw------- 1 boincer umatlas    991545 Nov 26 11:29 agis_schedconf.cvmfs.json
[2025-11-27 00:00:35] -rw-r--r-- 1 boincer umatlas       532 Nov 26 23:48 boinc_task_state.xml
[2025-11-27 00:00:35] -rw------- 1 boincer umatlas 908248892 Nov 26 23:59 HITS.47556185._000114.pool.root.1
[2025-11-27 00:00:35] -rw------- 1 boincer umatlas      1062 Nov 26 23:59 memory_monitor_summary.json
[2025-11-27 00:00:35] -rw------- 1 boincer umatlas   1516240 Nov 26 23:59 agis_ddmendpoints.agis.ALL.json
[2025-11-27 00:00:35] -rw------- 1 boincer umatlas   1979286 Nov 26 23:59 log.47556185._000114.job.log.tgz.1
[2025-11-27 00:00:35] -rw------- 1 boincer umatlas        96 Nov 26 23:59 pilot_heartbeat.json
[2025-11-27 00:00:35] -rw------- 1 boincer umatlas      8671 Nov 27 00:00 heartbeat.json
[2025-11-27 00:00:35] -rw-r--r-- 1 boincer umatlas      5913 Nov 27 00:00 init_data.xml
[2025-11-27 00:00:35] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 00:00 boinc_mmap_file
[2025-11-27 00:00:35] -rw-r--r-- 1 boincer umatlas        29 Nov 27 00:00 wrapper_checkpoint.txt
[2025-11-27 00:00:35] -rw------- 1 boincer umatlas       745 Nov 27 00:00 pilotlog.txt
[2025-11-27 00:00:35] -rw------- 1 boincer umatlas   6197681 Nov 27 00:00 log.47556185._000114.job.log.1
[2025-11-27 00:00:35] -rw------- 1 boincer umatlas       353 Nov 27 00:00 output.list
[2025-11-27 00:00:35] -rw-r--r-- 1 boincer umatlas       620 Nov 27 00:00 runtime_log
[2025-11-27 00:00:35] -rw------- 1 boincer umatlas   8192000 Nov 27 00:00 result.tar.gz
[2025-11-27 00:00:35] -rw-r--r-- 1 boincer umatlas      9428 Nov 27 00:00 runtime_log.err
[2025-11-27 00:00:35] -rw------- 1 boincer umatlas       793 Nov 27 00:00 9HCNDmIb3h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpFMKDmND9oQm.diag
[2025-11-27 00:00:35] -rw-r--r-- 1 boincer umatlas     23453 Nov 27 00:00 stderr.txt
[2025-11-27 00:00:35] HITS file was successfully produced:
[2025-11-27 00:00:35] -rw------- 1 boincer umatlas 908248892 Nov 26 23:59 shared/HITS.pool.root.1
[2025-11-27 00:00:35]  *** Contents of shared directory: ***
[2025-11-27 00:00:35] total 1295384
[2025-11-27 00:00:35] -rw-r--r-- 3 boincer umatlas 409407690 Nov 26 00:18 ATLAS.root_0
[2025-11-27 00:00:35] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 00:18 start_atlas.sh
[2025-11-27 00:00:35] -rw-r--r-- 2 boincer umatlas    590103 Nov 26 00:18 input.tar.gz
[2025-11-27 00:00:35] -rw------- 1 boincer umatlas 908248892 Nov 26 23:59 HITS.pool.root.1
[2025-11-27 00:00:35] -rw------- 1 boincer umatlas   8192000 Nov 27 00:00 result.tar.gz
00:00:37 (12183): run_atlas exited; CPU time 344543.618272
00:00:37 (12183): called boinc_finish(0)

</stderr_txt>
]]>

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