Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:07:29 (2584097): wrapper (7.7.26015): starting
17:07:29 (2584097): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 17:07:29] Arguments: --nthreads 8
[2025-11-26 17:07:29] Threads: 8
[2025-11-26 17:07:29] Checking for CVMFS
[2025-11-26 17:07:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 17:07:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 17:07:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 17:07:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 17:07:30] 2.13.3.0 11772 30584 378160 153335 3 1113 26907882 32935936 50858 16776704 0 174644997 99.512 223924803 39024 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 17:07:30] CVMFS is ok
[2025-11-26 17:07:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 17:07:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 17:07:30] Further information can be found at the LHC@home message board.
[2025-11-26 17:07:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 17:07:30] Checking for apptainer binary...
[2025-11-26 17:07:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 17:07:30] Running /usr/bin/apptainer --version
[2025-11-26 17:07:30] apptainer version 1.4.4-1.el9
[2025-11-26 17:07:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 17:07:30] c7-3-28.aglt2.org
[2025-11-26 17:07:30] apptainer works
[2025-11-26 17:07:30] Set ATHENA_PROC_NUMBER=8
[2025-11-26 17:07:30] Set ATHENA_CORE_NUMBER=8
[2025-11-26 17:07:30] Starting ATLAS job with PandaID=6896764141
[2025-11-26 17:07:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:27:11]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:27:11] 2025-11-27 08:26:38,124 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 03:27:11] 2025-11-27 08:26:38,124 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:27:11] 2025-11-27 08:26:38,132 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:27:11] 2025-11-27 08:26:38,133 | INFO     | sum of square deviations: 69689291795.55264
[2025-11-27 03:27:11] 2025-11-27 08:26:38,139 | INFO     | sum of deviations: 673435078616.2233
[2025-11-27 03:27:11] 2025-11-27 08:26:38,140 | INFO     | mean x: 1764213408.1644738
[2025-11-27 03:27:11] 2025-11-27 08:26:38,140 | INFO     | mean y: 2902867.6677631577
[2025-11-27 03:27:11] 2025-11-27 08:26:38,140 | INFO     | intersect: -17045386254.117477
[2025-11-27 03:27:11] 2025-11-27 08:26:38,140 | INFO     | chi2: 6.852775202409553
[2025-11-27 03:27:11] 2025-11-27 08:26:38,141 | INFO     | sum of square deviations: 67984117923.32669
[2025-11-27 03:27:11] 2025-11-27 08:26:38,147 | INFO     | sum of deviations: 891968486302.8812
[2025-11-27 03:27:11] 2025-11-27 08:26:38,148 | INFO     | mean x: 1764213255.6699834
[2025-11-27 03:27:11] 2025-11-27 08:26:38,148 | INFO     | mean y: 2922414.225538972
[2025-11-27 03:27:11] 2025-11-27 08:26:38,148 | INFO     | intersect: -23143993001.37467
[2025-11-27 03:27:11] 2025-11-27 08:26:38,148 | INFO     | chi2: 3.257045995330716
[2025-11-27 03:27:11] 2025-11-27 08:26:38,148 | INFO     | current chi2=3.257045995330716 (change=52.47113907683003 %)
[2025-11-27 03:27:11] 2025-11-27 08:26:38,149 | INFO     | sum of square deviations: 66306954549.91305
[2025-11-27 03:27:11] 2025-11-27 08:26:38,155 | INFO     | sum of deviations: 980222530511.1288
[2025-11-27 03:27:11] 2025-11-27 08:26:38,155 | INFO     | mean x: 1764213103.173913
[2025-11-27 03:27:11] 2025-11-27 08:26:38,155 | INFO     | mean y: 2930402.7391304346
[2025-11-27 03:27:11] 2025-11-27 08:26:38,156 | INFO     | intersect: -26077613396.814575
[2025-11-27 03:27:11] 2025-11-27 08:26:38,156 | INFO     | chi2: 2.0237500414396368
[2025-11-27 03:27:11] 2025-11-27 08:26:38,156 | INFO     | current chi2=2.0237500414396368 (change=37.86547551551699 %)
[2025-11-27 03:27:11] 2025-11-27 08:26:38,157 | INFO     | sum of square deviations: 64657532208.1857
[2025-11-27 03:27:11] 2025-11-27 08:26:38,165 | INFO     | sum of deviations: 964586510374.6455
[2025-11-27 03:27:11] 2025-11-27 08:26:38,165 | INFO     | mean x: 1764212950.6745362
[2025-11-27 03:27:11] 2025-11-27 08:26:38,165 | INFO     | mean y: 2928957.075885329
[2025-11-27 03:27:11] 2025-11-27 08:26:38,165 | INFO     | intersect: -26316294117.656097
[2025-11-27 03:27:11] 2025-11-27 08:26:38,166 | INFO     | chi2: 2.019896020089842
[2025-11-27 03:27:11] 2025-11-27 08:26:38,166 | INFO     | current chi2=2.019896020089842 (change=0.1904395933725692 %)
[2025-11-27 03:27:11] 2025-11-27 08:26:38,166 | INFO     | right removable region: 592
[2025-11-27 03:27:11] 2025-11-27 08:26:38,166 | INFO     | sum of square deviations: 67983871483.326775
[2025-11-27 03:27:11] 2025-11-27 08:26:38,173 | INFO     | sum of deviations: 530125418159.2432
[2025-11-27 03:27:11] 2025-11-27 08:26:38,173 | INFO     | mean x: 1764213560.6699834
[2025-11-27 03:27:11] 2025-11-27 08:26:38,173 | INFO     | mean y: 2915648.378109453
[2025-11-27 03:27:11] 2025-11-27 08:26:38,175 | INFO     | intersect: -13754089228.900114
[2025-11-27 03:27:11] 2025-11-27 08:26:38,176 | INFO     | chi2: 5.064002037449982
[2025-11-27 03:27:11] 2025-11-27 08:26:38,176 | INFO     | current chi2=5.064002037449982 (change=26.102901556300985 %)
[2025-11-27 03:27:11] 2025-11-27 08:26:38,177 | INFO     | sum of square deviations: 66306645097.94148
[2025-11-27 03:27:11] 2025-11-27 08:26:38,184 | INFO     | sum of deviations: 490810626623.0685
[2025-11-27 03:27:11] 2025-11-27 08:26:38,184 | INFO     | mean x: 1764213713.1688964
[2025-11-27 03:27:11] 2025-11-27 08:26:38,184 | INFO     | mean y: 2919221.573578595
[2025-11-27 03:27:11] 2025-11-27 08:26:38,184 | INFO     | intersect: -13056025877.79654
[2025-11-27 03:27:11] 2025-11-27 08:26:38,184 | INFO     | chi2: 5.024223395194958
[2025-11-27 03:27:11] 2025-11-27 08:26:38,185 | INFO     | current chi2=5.024223395194958 (change=0.7855178959417484 %)
[2025-11-27 03:27:11] 2025-11-27 08:26:38,185 | INFO     | left removable region: 20
[2025-11-27 03:27:11] 2025-11-27 08:26:38,185 | INFO     | sum of square deviations: 58028390265.86541
[2025-11-27 03:27:11] 2025-11-27 08:26:38,191 | INFO     | sum of deviations: 711743959855.847
[2025-11-27 03:27:11] 2025-11-27 08:26:38,191 | INFO     | mean x: 1764213530.1730769
[2025-11-27 03:27:11] 2025-11-27 08:26:38,191 | INFO     | mean y: 2952525.769230769
[2025-11-27 03:27:11] 2025-11-27 08:26:38,191 | INFO     | intersect: -21635909387.229282
[2025-11-27 03:27:11] 2025-11-27 08:26:38,192 | INFO     | chi2: 0.1237107199562466
[2025-11-27 03:27:11] 2025-11-27 08:26:38,192 | INFO     | current memory leak: 12.27 B/s (using 572 data points, chi2=0.12)
[2025-11-27 03:27:11] 2025-11-27 08:26:38,192 | INFO     | could have reported an average CPU frequency of 3149 MHz (24 samples)
[2025-11-27 03:27:11] 2025-11-27 08:26:38,193 | INFO     | ..............................
[2025-11-27 03:27:11] 2025-11-27 08:26:38,193 | INFO     | . Timing measurements:
[2025-11-27 03:27:11] 2025-11-27 08:26:38,193 | INFO     | . get job = 0 s
[2025-11-27 03:27:11] 2025-11-27 08:26:38,193 | INFO     | . initial setup = 2 s
[2025-11-27 03:27:11] 2025-11-27 08:26:38,193 | INFO     | . payload setup = 7 s
[2025-11-27 03:27:11] 2025-11-27 08:26:38,193 | INFO     | . stage-in = 0 s
[2025-11-27 03:27:11] 2025-11-27 08:26:38,193 | INFO     | . payload execution = 37091 s
[2025-11-27 03:27:11] 2025-11-27 08:26:38,193 | INFO     | . stage-out = 3 s
[2025-11-27 03:27:11] 2025-11-27 08:26:38,193 | INFO     | . log creation = 0 s
[2025-11-27 03:27:11] 2025-11-27 08:26:38,193 | INFO     | ..............................
[2025-11-27 03:27:11] 2025-11-27 08:26:38,762 | INFO     | 
[2025-11-27 03:27:11] 2025-11-27 08:26:38,762 | INFO     | job summary report
[2025-11-27 03:27:11] 2025-11-27 08:26:38,762 | INFO     | --------------------------------------------------
[2025-11-27 03:27:11] 2025-11-27 08:26:38,763 | INFO     | PanDA job id: 6896764141
[2025-11-27 03:27:11] 2025-11-27 08:26:38,763 | INFO     | task id: 47556185
[2025-11-27 03:27:11] 2025-11-27 08:26:38,763 | INFO     | errors: (none)
[2025-11-27 03:27:11] 2025-11-27 08:26:38,763 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:27:11] 2025-11-27 08:26:38,763 | INFO     | pilot state: finished 
[2025-11-27 03:27:11] 2025-11-27 08:26:38,763 | INFO     | transexitcode: 0
[2025-11-27 03:27:11] 2025-11-27 08:26:38,763 | INFO     | exeerrorcode: 0
[2025-11-27 03:27:11] 2025-11-27 08:26:38,763 | INFO     | exeerrordiag: 
[2025-11-27 03:27:11] 2025-11-27 08:26:38,763 | INFO     | exitcode: 0
[2025-11-27 03:27:11] 2025-11-27 08:26:38,763 | INFO     | exitmsg: OK
[2025-11-27 03:27:11] 2025-11-27 08:26:38,763 | INFO     | cpuconsumptiontime: 201189 s
[2025-11-27 03:27:11] 2025-11-27 08:26:38,763 | INFO     | nevents: 1000
[2025-11-27 03:27:11] 2025-11-27 08:26:38,764 | INFO     | neventsw: 0
[2025-11-27 03:27:11] 2025-11-27 08:26:38,764 | INFO     | pid: 2594892
[2025-11-27 03:27:11] 2025-11-27 08:26:38,764 | INFO     | pgrp: 2594892
[2025-11-27 03:27:11] 2025-11-27 08:26:38,764 | INFO     | corecount: 8
[2025-11-27 03:27:11] 2025-11-27 08:26:38,764 | INFO     | event service: False
[2025-11-27 03:27:11] 2025-11-27 08:26:38,764 | INFO     | sizes: {0: 2284141, 1: 2284340, 6: 2284602, 11: 2284630, 37102: 2326516, 37106: 2335510, 37108: 2335694, 37117: 2335940}
[2025-11-27 03:27:11] 2025-11-27 08:26:38,764 | INFO     | --------------------------------------------------
[2025-11-27 03:27:11] 2025-11-27 08:26:38,764 | INFO     | 
[2025-11-27 03:27:11] 2025-11-27 08:26:38,764 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 03:27:11] 2025-11-27 08:26:38,854 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:27:11] 2025-11-27 08:26:38,855 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:27:11] 2025-11-27 08:26:38,855 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:27:11] 2025-11-27 08:26:38,855 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:27:11] 2025-11-27 08:26:38,855 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:27:11] 2025-11-27 08:26:38,855 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:27:11] 2025-11-27 08:26:38,855 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:27:11] 2025-11-27 08:26:38,855 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:27:11] 2025-11-27 08:26:38,855 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:27:11] 2025-11-27 08:26:38,855 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:27:11] 2025-11-27 08:26:38,855 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:27:11] 2025-11-27 08:26:38,856 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:27:11] 2025-11-27 08:26:38,856 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:27:11] 2025-11-27 08:26:38,856 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:27:11] 2025-11-27 08:26:38,856 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:27:11] 2025-11-27 08:26:38,856 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:27:11] 2025-11-27 08:26:38,856 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:27:11] 2025-11-27 08:26:38,856 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:27:11] 2025-11-27 08:26:38,856 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:27:11] 2025-11-27 08:26:38,856 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:27:11] 2025-11-27 08:26:38,856 | INFO     | job 6896764141 has completed (purged errors)
[2025-11-27 03:27:11] 2025-11-27 08:26:38,856 | INFO     | overall cleanup function is called
[2025-11-27 03:27:11] 2025-11-27 08:26:39,957 | INFO     | --- collectZombieJob: --- 10, [2594892]
[2025-11-27 03:27:11] 2025-11-27 08:26:39,957 | INFO     | zombie collector waiting for pid 2594892
[2025-11-27 03:27:11] 2025-11-27 08:26:39,957 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:27:11] 2025-11-27 08:26:39,957 | INFO     | collected zombie processes
[2025-11-27 03:27:11] 2025-11-27 08:26:39,957 | INFO     | will attempt to kill all subprocesses of pid=2594892
[2025-11-27 03:27:11] 2025-11-27 08:26:40,776 | INFO     | process IDs to be killed: [2594892] (in reverse order)
[2025-11-27 03:27:11] 2025-11-27 08:26:41,012 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:27:11] 2025-11-27 08:26:41,012 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:27:11] 2025-11-27 08:26:41,043 | INFO     | did not find any defunct processes belonging to 2594892
[2025-11-27 03:27:11] 2025-11-27 08:26:41,072 | INFO     | did not find any defunct processes belonging to 2594892
[2025-11-27 03:27:11] 2025-11-27 08:26:41,073 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:27:11] 2025-11-27 08:26:41,073 | INFO     | ready for new job
[2025-11-27 03:27:11] 2025-11-27 08:26:41,073 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:27:11] 2025-11-27 08:26:41,081 | INFO     | ***************************************
[2025-11-27 03:27:11] 2025-11-27 08:26:41,106 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:27:11] 2025-11-27 08:26:41,106 | INFO     | ***************************************
[2025-11-27 03:27:11] 2025-11-27 08:26:41,106 | INFO     | 
[2025-11-27 03:27:11] 2025-11-27 08:26:41,132 | INFO     | architecture information:
[2025-11-27 03:27:11] 2025-11-27 08:26:41,133 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:27:11] 2025-11-27 08:26:41,165 | INFO     | cat /etc/os-release:
[2025-11-27 03:27:11] NAME="CentOS Linux"
[2025-11-27 03:27:11] VERSION="7 (Core)"
[2025-11-27 03:27:11] ID="centos"
[2025-11-27 03:27:11] ID_LIKE="rhel fedora"
[2025-11-27 03:27:11] VERSION_ID="7"
[2025-11-27 03:27:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:27:11] ANSI_COLOR="0;31"
[2025-11-27 03:27:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:27:11] HOME_URL="https://www.centos.org/"
[2025-11-27 03:27:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:27:11] 
[2025-11-27 03:27:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:27:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:27:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:27:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:27:11] 
[2025-11-27 03:27:11] 2025-11-27 08:26:41,165 | INFO     | ***************************************
[2025-11-27 03:27:11] 2025-11-27 08:26:41,669 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 03:27:11] 2025-11-27 08:26:41,699 | INFO     | sufficient remaining disk space (62858985472 B)
[2025-11-27 03:27:11] 2025-11-27 08:26:41,699 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:27:11] 2025-11-27 08:26:41,700 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:27:11] 2025-11-27 08:26:41,700 | INFO     | update_server=False
[2025-11-27 03:27:11] 2025-11-27 08:26:41,700 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:27:11] 2025-11-27 08:26:41,953 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:27:11] 2025-11-27 08:26:41,953 | INFO     | aborting loop
[2025-11-27 03:27:11] 2025-11-27 08:26:42,357 | INFO     | all job control threads have been joined
[2025-11-27 03:27:11] 2025-11-27 08:26:42,454 | INFO     | all data control threads have been joined
[2025-11-27 03:27:11] 2025-11-27 08:26:42,487 | INFO     | all payload control threads have been joined
[2025-11-27 03:27:11] 2025-11-27 08:26:42,535 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:27:11] 2025-11-27 08:26:42,706 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:27:11] 2025-11-27 08:26:42,959 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:27:11] 2025-11-27 08:26:42,978 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:27:11] 2025-11-27 08:26:43,087 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:27:11] 2025-11-27 08:26:43,101 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:27:11] 2025-11-27 08:26:43,137 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:27:11] 2025-11-27 08:26:43,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:27:11] 2025-11-27 08:26:43,364 | INFO     | [job] control thread has finished
[2025-11-27 03:27:11] 2025-11-27 08:26:43,460 | INFO     | [data] control thread has finished
[2025-11-27 03:27:11] 2025-11-27 08:26:43,493 | INFO     | [payload] control thread has finished
[2025-11-27 03:27:11] 2025-11-27 08:26:43,595 | INFO     | [job] validate thread has finished
[2025-11-27 03:27:11] 2025-11-27 08:26:43,600 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:27:11] 2025-11-27 08:26:43,625 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:27:11] 2025-11-27 08:26:43,728 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:27:11] 2025-11-27 08:26:44,210 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:27:11] 2025-11-27 08:26:44,292 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:27:11] 2025-11-27 08:26:44,541 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:27:11] 2025-11-27 08:26:48,244 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:27:11] 2025-11-27 08:26:49,346 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:27:11] 2025-11-27 08:26:50,867 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140699939493696)>', '<ExcThread(monitor, started 140699219515136)>']
[2025-11-27 03:27:11] 2025-11-27 08:26:55,894 | INFO     | all workflow threads have been joined
[2025-11-27 03:27:11] 2025-11-27 08:26:55,894 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:27:11] 2025-11-27 08:26:55,909 | INFO     | traces error code: 0
[2025-11-27 03:27:11] 2025-11-27 08:26:55,909 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:27:11] 2025-11-27 08:27:11,338 | INFO     | PID=2587924 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 03:27:11] 2025-11-27 08:27:11,339 | INFO     | .. there are 75 such processes running
[2025-11-27 03:27:11] 2025-11-27 08:27:11,339 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:27:11] 2025-11-27 08:27:11,339 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:27:11] 2025-11-27 08:27:11,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:27:11] 2025-11-27 08:27:11,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:27:11] 2025-11-27 08:27:11,340 | INFO     | [monitor] control thread has ended
[2025-11-27 03:27:11] 2025-11-27 08:27:11,508 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:27:11] 2025-11-27 08:27:11,511 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:27:11] 2025-11-27 08:27:11,514 [wrapper] pilotpid: 2587924
[2025-11-27 03:27:11] 2025-11-27 08:27:11,516 [wrapper] Pilot exit status: 0
[2025-11-27 03:27:11] 2025-11-27 08:27:11,533 [wrapper] pandaids: 6896764141
[2025-11-27 03:27:11] 2025-11-27 08:27:11,688 [wrapper] cleanup supervisor_pilot 2281612 2587925
[2025-11-27 03:27:11] 2025-11-27 08:27:11,692 [wrapper] Test setup, not cleaning
[2025-11-27 03:27:11] 2025-11-27 08:27:11,695 [wrapper] apfmon messages muted
[2025-11-27 03:27:11] 2025-11-27 08:27:11,697 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:27:11] 2025-11-27 08:27:11,699 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:27:11]  *** Error codes and diagnostics ***
[2025-11-27 03:27:11]     "exeErrorCode": 0,
[2025-11-27 03:27:11]     "exeErrorDiag": "",
[2025-11-27 03:27:11]     "pilotErrorCode": 0,
[2025-11-27 03:27:11]     "pilotErrorDiag": "",
[2025-11-27 03:27:11]  *** Listing of results directory ***
[2025-11-27 03:27:11] total 1322444
[2025-11-27 03:27:11] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 03:00 pilot3.tar.gz
[2025-11-27 03:27:11] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 03:27 queuedata.json
[2025-11-27 03:27:11] -rwx------. 1 boincer umatlas     36292 Nov 25 03:29 runpilot2-wrapper.sh
[2025-11-27 03:27:11] -rw-r--r--. 1 boincer umatlas       100 Nov 26 17:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:27:11] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 17:07 run_atlas
[2025-11-27 03:27:11] -rw-r--r--. 1 boincer umatlas       105 Nov 26 17:07 job.xml
[2025-11-27 03:27:11] -rw-r--r--. 2 boincer umatlas 409407690 Nov 26 17:07 EVNT.47483658._004248.pool.root.1
[2025-11-27 03:27:11] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 17:07 start_atlas.sh
[2025-11-27 03:27:11] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 17:07 shared
[2025-11-27 03:27:11] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 17:07 input.tar.gz
[2025-11-27 03:27:11] -rw-r--r--. 1 boincer umatlas         0 Nov 26 17:07 boinc_lockfile
[2025-11-27 03:27:11] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 17:07 pandaJob.out
[2025-11-27 03:27:11] -rw-------. 1 boincer umatlas        57 Nov 26 17:07 setup.sh.local
[2025-11-27 03:27:11] -rw-------. 1 boincer umatlas    991538 Nov 26 17:07 agis_schedconf.cvmfs.json
[2025-11-27 03:27:11] drwx------. 5 boincer umatlas      4096 Nov 26 17:07 pilot3
[2025-11-27 03:27:11] -rw-r--r--. 1 boincer umatlas       533 Nov 27 03:16 boinc_task_state.xml
[2025-11-27 03:27:11] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 03:22 init_data.xml
[2025-11-27 03:27:11] -rw-------. 1 boincer umatlas 927954699 Nov 27 03:24 HITS.47556185._000115.pool.root.1
[2025-11-27 03:27:11] -rw-------. 1 boincer umatlas        95 Nov 27 03:26 pilot_heartbeat.json
[2025-11-27 03:27:11] -rw-------. 1 boincer umatlas      1072 Nov 27 03:26 memory_monitor_summary.json
[2025-11-27 03:27:11] -rw-------. 1 boincer umatlas   1516240 Nov 27 03:26 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:27:11] -rw-------. 1 boincer umatlas   1844241 Nov 27 03:26 log.47556185._000115.job.log.tgz.1
[2025-11-27 03:27:11] -rw-------. 1 boincer umatlas      8622 Nov 27 03:26 heartbeat.json
[2025-11-27 03:27:11] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 03:27 boinc_mmap_file
[2025-11-27 03:27:11] -rw-r--r--. 1 boincer umatlas        29 Nov 27 03:27 wrapper_checkpoint.txt
[2025-11-27 03:27:11] -rw-------. 1 boincer umatlas       823 Nov 27 03:27 pilotlog.txt
[2025-11-27 03:27:11] -rw-------. 1 boincer umatlas   4603601 Nov 27 03:27 log.47556185._000115.job.log.1
[2025-11-27 03:27:11] -rw-------. 1 boincer umatlas       353 Nov 27 03:27 output.list
[2025-11-27 03:27:11] -rw-r--r--. 1 boincer umatlas       620 Nov 27 03:27 runtime_log
[2025-11-27 03:27:11] -rw-------. 1 boincer umatlas   6471680 Nov 27 03:27 result.tar.gz
[2025-11-27 03:27:11] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 03:27 runtime_log.err
[2025-11-27 03:27:11] -rw-------. 1 boincer umatlas       664 Nov 27 03:27 AAENDmIb3h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqFMKDmSzS7Mn.diag
[2025-11-27 03:27:11] -rw-r--r--. 1 boincer umatlas     21126 Nov 27 03:27 stderr.txt
[2025-11-27 03:27:11] HITS file was successfully produced:
[2025-11-27 03:27:11] -rw-------. 1 boincer umatlas 927954699 Nov 27 03:24 shared/HITS.pool.root.1
[2025-11-27 03:27:11]  *** Contents of shared directory: ***
[2025-11-27 03:27:11] total 1312948
[2025-11-27 03:27:11] -rw-r--r--. 2 boincer umatlas 409407690 Nov 26 17:07 ATLAS.root_0
[2025-11-27 03:27:11] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 17:07 start_atlas.sh
[2025-11-27 03:27:11] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 17:07 input.tar.gz
[2025-11-27 03:27:11] -rw-------. 1 boincer umatlas 927954699 Nov 27 03:24 HITS.pool.root.1
[2025-11-27 03:27:11] -rw-------. 1 boincer umatlas   6471680 Nov 27 03:27 result.tar.gz
03:27:13 (2584097): run_atlas exited; CPU time 202186.501643
03:27:13 (2584097): called boinc_finish(0)

</stderr_txt>
]]>

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