Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:16:09 (2879086): wrapper (7.7.26015): starting
00:16:09 (2879086): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:16:09] Arguments: --nthreads 9
[2025-11-26 00:16:09] Threads: 9
[2025-11-26 00:16:09] Checking for CVMFS
[2025-11-26 00:16:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:16:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:16:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:16:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:16:10] 2.13.3.0 11338 29483 235116 153310 2 335 26834327 32935937 44971 16776704 0 143623865 99.519 174143851 38968 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:16:10] CVMFS is ok
[2025-11-26 00:16:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:16:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:16:10] Further information can be found at the LHC@home message board.
[2025-11-26 00:16:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:16:10] Checking for apptainer binary...
[2025-11-26 00:16:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:16:10] Running /usr/bin/apptainer --version
[2025-11-26 00:16:10] apptainer version 1.4.4-1.el9
[2025-11-26 00:16:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:16:10] c7-3-17.aglt2.org
[2025-11-26 00:16:10] apptainer works
[2025-11-26 00:16:10] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:16:10] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:16:10] Starting ATLAS job with PandaID=6896764134
[2025-11-26 00:16:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 10:23:08]  *** The last 200 lines of the pilot log: ***
[2025-11-27 10:23:08] 2025-11-27 15:22:19,200 | INFO     | extracted standard info from prmon json
[2025-11-27 10:23:08] 2025-11-27 15:22:19,200 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 10:23:08] 2025-11-27 15:22:19,201 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 10:23:08] 2025-11-27 15:22:19,224 | INFO     | fitting pss+swap vs Time
[2025-11-27 10:23:08] 2025-11-27 15:22:19,226 | INFO     | sum of square deviations: 2521839989952.391
[2025-11-27 10:23:08] 2025-11-27 15:22:19,434 | INFO     | sum of deviations: 15093568184239.33
[2025-11-27 10:23:08] 2025-11-27 15:22:19,434 | INFO     | mean x: 1764195537.0174043
[2025-11-27 10:23:08] 2025-11-27 15:22:19,434 | INFO     | mean y: 3151457.704624565
[2025-11-27 10:23:08] 2025-11-27 15:22:19,452 | INFO     | intersect: -10555807768.25547
[2025-11-27 10:23:08] 2025-11-27 15:22:19,453 | INFO     | chi2: 11.979407067299764
[2025-11-27 10:23:08] 2025-11-27 15:22:19,455 | INFO     | sum of square deviations: 2503077127284.702
[2025-11-27 10:23:08] 2025-11-27 15:22:19,928 | INFO     | sum of deviations: 15865257419109.701
[2025-11-27 10:23:08] 2025-11-27 15:22:19,928 | INFO     | mean x: 1764195384.5199401
[2025-11-27 10:23:08] 2025-11-27 15:22:19,929 | INFO     | mean y: 3157730.5947158523
[2025-11-27 10:23:08] 2025-11-27 15:22:19,929 | INFO     | intersect: -11178844456.999296
[2025-11-27 10:23:08] 2025-11-27 15:22:19,930 | INFO     | chi2: 8.450921734788086
[2025-11-27 10:23:08] 2025-11-27 15:22:19,930 | INFO     | current chi2=8.450921734788086 (change=29.45459080477697 %)
[2025-11-27 10:23:08] 2025-11-27 15:22:19,932 | INFO     | sum of square deviations: 2484407568691.9834
[2025-11-27 10:23:08] 2025-11-27 15:22:20,309 | INFO     | sum of deviations: 16588900953335.496
[2025-11-27 10:23:08] 2025-11-27 15:22:20,310 | INFO     | mean x: 1764195232.0224888
[2025-11-27 10:23:08] 2025-11-27 15:22:20,310 | INFO     | mean y: 3163640.8775612195
[2025-11-27 10:23:08] 2025-11-27 15:22:20,310 | INFO     | intersect: -11776731226.282297
[2025-11-27 10:23:08] 2025-11-27 15:22:20,338 | INFO     | chi2: 5.239379015821411
[2025-11-27 10:23:08] 2025-11-27 15:22:20,338 | INFO     | current chi2=5.239379015821411 (change=38.00227738172523 %)
[2025-11-27 10:23:08] 2025-11-27 15:22:20,340 | INFO     | sum of square deviations: 2465830959429.7954
[2025-11-27 10:23:08] 2025-11-27 15:22:20,401 | INFO     | monitor loop #7808: job 0:6896764134 is in state 'finished'
[2025-11-27 10:23:08] 2025-11-27 15:22:20,402 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:23:08] 2025-11-27 15:22:20,646 | INFO     | time since job start (122750s) is within the limit (172800.0s)
[2025-11-27 10:23:08] 2025-11-27 15:22:20,735 | INFO     | sum of deviations: 16851211560063.756
[2025-11-27 10:23:08] 2025-11-27 15:22:20,736 | INFO     | mean x: 1764195079.524549
[2025-11-27 10:23:08] 2025-11-27 15:22:20,736 | INFO     | mean y: 3165793.484468938
[2025-11-27 10:23:08] 2025-11-27 15:22:20,736 | INFO     | intersect: -12053145043.478273
[2025-11-27 10:23:08] 2025-11-27 15:22:20,738 | INFO     | chi2: 4.569590243198739
[2025-11-27 10:23:08] 2025-11-27 15:22:20,738 | INFO     | current chi2=4.569590243198739 (change=12.783743466546388 %)
[2025-11-27 10:23:08] 2025-11-27 15:22:20,738 | INFO     | right removable region: 1995
[2025-11-27 10:23:08] 2025-11-27 15:22:20,743 | INFO     | sum of square deviations: 2503075879224.7
[2025-11-27 10:23:08] 2025-11-27 15:22:21,079 | INFO     | sum of deviations: 14363331513601.44
[2025-11-27 10:23:08] 2025-11-27 15:22:21,079 | INFO     | mean x: 1764195689.5199401
[2025-11-27 10:23:08] 2025-11-27 15:22:21,079 | INFO     | mean y: 3157390.976570289
[2025-11-27 10:23:08] 2025-11-27 15:22:21,079 | INFO     | intersect: -10120278240.263771
[2025-11-27 10:23:08] 2025-11-27 15:22:21,081 | INFO     | chi2: 9.249572880236816
[2025-11-27 10:23:08] 2025-11-27 15:22:21,081 | INFO     | current chi2=9.249572880236816 (change=22.787723730622595 %)
[2025-11-27 10:23:08] 2025-11-27 15:22:21,081 | INFO     | left removable region: 10
[2025-11-27 10:23:08] 2025-11-27 15:22:21,083 | INFO     | sum of square deviations: 2425286900842.3047
[2025-11-27 10:23:08] 2025-11-27 15:22:21,276 | INFO     | sum of deviations: 15920858476097.326
[2025-11-27 10:23:08] 2025-11-27 15:22:21,276 | INFO     | mean x: 1764195354.0292192
[2025-11-27 10:23:08] 2025-11-27 15:22:21,276 | INFO     | mean y: 3174053.2010075566
[2025-11-27 10:23:08] 2025-11-27 15:22:21,276 | INFO     | intersect: -11577931895.927237
[2025-11-27 10:23:08] 2025-11-27 15:22:21,279 | INFO     | chi2: 1.6486975937959847
[2025-11-27 10:23:08] 2025-11-27 15:22:21,279 | INFO     | current memory leak: 6.56 B/s (using 1985 data points, chi2=1.65)
[2025-11-27 10:23:08] 2025-11-27 15:22:21,281 | INFO     | could have reported an average CPU frequency of 3149 MHz (71 samples)
[2025-11-27 10:23:08] 2025-11-27 15:22:21,281 | INFO     | ..............................
[2025-11-27 10:23:08] 2025-11-27 15:22:21,281 | INFO     | . Timing measurements:
[2025-11-27 10:23:08] 2025-11-27 15:22:21,281 | INFO     | . get job = 0 s
[2025-11-27 10:23:08] 2025-11-27 15:22:21,281 | INFO     | . initial setup = 2 s
[2025-11-27 10:23:08] 2025-11-27 15:22:21,281 | INFO     | . payload setup = 12 s
[2025-11-27 10:23:08] 2025-11-27 15:22:21,281 | INFO     | . stage-in = 0 s
[2025-11-27 10:23:08] 2025-11-27 15:22:21,281 | INFO     | . payload execution = 122679 s
[2025-11-27 10:23:08] 2025-11-27 15:22:21,281 | INFO     | . stage-out = 4 s
[2025-11-27 10:23:08] 2025-11-27 15:22:21,302 | INFO     | . log creation = 1 s
[2025-11-27 10:23:08] 2025-11-27 15:22:21,302 | INFO     | ..............................
[2025-11-27 10:23:08] 2025-11-27 15:22:21,380 | INFO     | 
[2025-11-27 10:23:08] 2025-11-27 15:22:21,380 | INFO     | job summary report
[2025-11-27 10:23:08] 2025-11-27 15:22:21,380 | INFO     | --------------------------------------------------
[2025-11-27 10:23:08] 2025-11-27 15:22:21,380 | INFO     | PanDA job id: 6896764134
[2025-11-27 10:23:08] 2025-11-27 15:22:21,380 | INFO     | task id: 47556185
[2025-11-27 10:23:08] 2025-11-27 15:22:21,381 | INFO     | errors: (none)
[2025-11-27 10:23:08] 2025-11-27 15:22:21,381 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 10:23:08] 2025-11-27 15:22:21,381 | INFO     | pilot state: finished 
[2025-11-27 10:23:08] 2025-11-27 15:22:21,381 | INFO     | transexitcode: 0
[2025-11-27 10:23:08] 2025-11-27 15:22:21,381 | INFO     | exeerrorcode: 0
[2025-11-27 10:23:08] 2025-11-27 15:22:21,381 | INFO     | exeerrordiag: 
[2025-11-27 10:23:08] 2025-11-27 15:22:21,381 | INFO     | exitcode: 0
[2025-11-27 10:23:08] 2025-11-27 15:22:21,381 | INFO     | exitmsg: OK
[2025-11-27 10:23:08] 2025-11-27 15:22:21,381 | INFO     | cpuconsumptiontime: 209185 s
[2025-11-27 10:23:08] 2025-11-27 15:22:21,381 | INFO     | nevents: 1000
[2025-11-27 10:23:08] 2025-11-27 15:22:21,381 | INFO     | neventsw: 0
[2025-11-27 10:23:08] 2025-11-27 15:22:21,381 | INFO     | pid: 2904526
[2025-11-27 10:23:08] 2025-11-27 15:22:21,382 | INFO     | pgrp: 2904526
[2025-11-27 10:23:08] 2025-11-27 15:22:21,382 | INFO     | corecount: 9
[2025-11-27 10:23:08] 2025-11-27 15:22:21,382 | INFO     | event service: False
[2025-11-27 10:23:08] 2025-11-27 15:22:21,382 | INFO     | sizes: {0: 2284262, 1: 2284290, 9: 2284552, 11: 2284580, 122696: 2368562, 122700: 2377556, 122704: 2377740, 122732: 2377986}
[2025-11-27 10:23:08] 2025-11-27 15:22:21,382 | INFO     | --------------------------------------------------
[2025-11-27 10:23:08] 2025-11-27 15:22:21,382 | INFO     | 
[2025-11-27 10:23:08] 2025-11-27 15:22:21,382 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-27 10:23:08] 2025-11-27 15:22:21,424 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 10:23:08] 2025-11-27 15:22:21,424 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 10:23:08] 2025-11-27 15:22:21,424 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 10:23:08] 2025-11-27 15:22:21,424 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 10:23:08] 2025-11-27 15:22:21,424 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 10:23:08] 2025-11-27 15:22:21,424 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 10:23:08] 2025-11-27 15:22:21,424 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 10:23:08] 2025-11-27 15:22:21,424 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 10:23:08] 2025-11-27 15:22:21,424 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 10:23:08] 2025-11-27 15:22:21,424 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 10:23:08] 2025-11-27 15:22:21,424 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 10:23:08] 2025-11-27 15:22:21,424 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 10:23:08] 2025-11-27 15:22:21,424 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 10:23:08] 2025-11-27 15:22:21,424 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 10:23:08] 2025-11-27 15:22:21,425 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 10:23:08] 2025-11-27 15:22:21,425 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 10:23:08] 2025-11-27 15:22:21,425 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 10:23:08] 2025-11-27 15:22:21,425 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 10:23:08] 2025-11-27 15:22:21,425 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 10:23:08] 2025-11-27 15:22:21,425 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 10:23:08] 2025-11-27 15:22:21,425 | INFO     | job 6896764134 has completed (purged errors)
[2025-11-27 10:23:08] 2025-11-27 15:22:21,425 | INFO     | overall cleanup function is called
[2025-11-27 10:23:08] 2025-11-27 15:22:22,442 | INFO     | --- collectZombieJob: --- 10, [2904526]
[2025-11-27 10:23:08] 2025-11-27 15:22:22,442 | INFO     | zombie collector waiting for pid 2904526
[2025-11-27 10:23:08] 2025-11-27 15:22:22,442 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 10:23:08] 2025-11-27 15:22:22,442 | INFO     | collected zombie processes
[2025-11-27 10:23:08] 2025-11-27 15:22:22,442 | INFO     | will attempt to kill all subprocesses of pid=2904526
[2025-11-27 10:23:08] 2025-11-27 15:22:23,728 | INFO     | process IDs to be killed: [2904526] (in reverse order)
[2025-11-27 10:23:08] 2025-11-27 15:22:23,988 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 10:23:08] 2025-11-27 15:22:23,988 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 10:23:08] 2025-11-27 15:22:24,108 | INFO     | did not find any defunct processes belonging to 2904526
[2025-11-27 10:23:08] 2025-11-27 15:22:24,238 | INFO     | did not find any defunct processes belonging to 2904526
[2025-11-27 10:23:08] 2025-11-27 15:22:24,239 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 10:23:08] 2025-11-27 15:22:24,240 | INFO     | ready for new job
[2025-11-27 10:23:08] 2025-11-27 15:22:24,240 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 10:23:08] 2025-11-27 15:22:24,246 | INFO     | ***************************************
[2025-11-27 10:23:08] 2025-11-27 15:22:24,246 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 10:23:08] 2025-11-27 15:22:24,246 | INFO     | ***************************************
[2025-11-27 10:23:08] 2025-11-27 15:22:24,247 | INFO     | 
[2025-11-27 10:23:08] 2025-11-27 15:22:24,251 | INFO     | architecture information:
[2025-11-27 10:23:08] 2025-11-27 15:22:24,252 | INFO     | executing command: cat /etc/os-release
[2025-11-27 10:23:08] 2025-11-27 15:22:24,340 | INFO     | cat /etc/os-release:
[2025-11-27 10:23:08] NAME="CentOS Linux"
[2025-11-27 10:23:08] VERSION="7 (Core)"
[2025-11-27 10:23:08] ID="centos"
[2025-11-27 10:23:08] ID_LIKE="rhel fedora"
[2025-11-27 10:23:08] VERSION_ID="7"
[2025-11-27 10:23:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 10:23:08] ANSI_COLOR="0;31"
[2025-11-27 10:23:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 10:23:08] HOME_URL="https://www.centos.org/"
[2025-11-27 10:23:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 10:23:08] 
[2025-11-27 10:23:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 10:23:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 10:23:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 10:23:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 10:23:08] 
[2025-11-27 10:23:08] 2025-11-27 15:22:24,340 | INFO     | ***************************************
[2025-11-27 10:23:08] 2025-11-27 15:22:24,846 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-27 10:23:08] 2025-11-27 15:22:24,948 | INFO     | sufficient remaining disk space (66101182464 B)
[2025-11-27 10:23:08] 2025-11-27 15:22:24,948 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 10:23:08] 2025-11-27 15:22:24,948 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 10:23:08] 2025-11-27 15:22:24,949 | INFO     | update_server=False
[2025-11-27 10:23:08] 2025-11-27 15:22:24,949 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 10:23:08] 2025-11-27 15:22:24,966 | INFO     | all payload control threads have been joined
[2025-11-27 10:23:08] 2025-11-27 15:22:24,973 | INFO     | all data control threads have been joined
[2025-11-27 10:23:08] 2025-11-27 15:22:25,434 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 10:23:08] 2025-11-27 15:22:25,435 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 10:23:08] 2025-11-27 15:22:25,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:23:08] 2025-11-27 15:22:25,435 | INFO     | will abort loop
[2025-11-27 10:23:08] 2025-11-27 15:22:25,435 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 10:23:08] 2025-11-27 15:22:25,594 | INFO     | all job control threads have been joined
[2025-11-27 10:23:08] 2025-11-27 15:22:25,954 | INFO     | [job] retrieve thread has finished
[2025-11-27 10:23:08] 2025-11-27 15:22:25,973 | INFO     | [payload] control thread has finished
[2025-11-27 10:23:08] 2025-11-27 15:22:25,979 | INFO     | [data] control thread has finished
[2025-11-27 10:23:08] 2025-11-27 15:22:26,191 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 10:23:08] 2025-11-27 15:22:26,253 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 10:23:08] 2025-11-27 15:22:26,261 | INFO     | [payload] failed_post thread has finished
[2025-11-27 10:23:08] 2025-11-27 15:22:26,267 | INFO     | [payload] validate_post thread has finished
[2025-11-27 10:23:08] 2025-11-27 15:22:26,407 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:23:08] 2025-11-27 15:22:26,440 | INFO     | [job] job monitor thread has finished
[2025-11-27 10:23:08] 2025-11-27 15:22:26,562 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 10:23:08] 2025-11-27 15:22:26,615 | INFO     | [job] control thread has finished
[2025-11-27 10:23:08] 2025-11-27 15:22:27,036 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 10:23:08] 2025-11-27 15:22:27,149 | INFO     | [data] copytool_in thread has finished
[2025-11-27 10:23:08] 2025-11-27 15:22:27,244 | INFO     | [job] validate thread has finished
[2025-11-27 10:23:08] 2025-11-27 15:22:27,421 | INFO     | [job] queue monitor thread has finished
[2025-11-27 10:23:08] 2025-11-27 15:22:27,441 | INFO     | [data] copytool_out thread has finished
[2025-11-27 10:23:08] 2025-11-27 15:22:30,200 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 10:23:08] 2025-11-27 15:22:35,950 | INFO     | job.realtimelogging is not enabled
[2025-11-27 10:23:08] 2025-11-27 15:22:36,955 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 10:23:08] 2025-11-27 15:22:54,817 | INFO     | PID=2885405 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 10:23:08] 2025-11-27 15:22:54,817 | INFO     | .. there are 68 such processes running
[2025-11-27 10:23:08] 2025-11-27 15:22:54,817 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 10:23:08] 2025-11-27 15:22:54,817 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 10:23:08] 2025-11-27 15:22:54,818 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 10:23:08] 2025-11-27 15:23:00,641 | INFO     | [monitor] cgroup control has ended
[2025-11-27 10:23:08] 2025-11-27 15:23:01,946 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139679113070400)>', '<ExcThread(monitor, started 139678485300992)>']
[2025-11-27 10:23:08] 2025-11-27 15:23:02,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 10:23:08] 2025-11-27 15:23:02,887 | INFO     | [monitor] control thread has ended
[2025-11-27 10:23:08] 2025-11-27 15:23:06,971 | INFO     | all workflow threads have been joined
[2025-11-27 10:23:08] 2025-11-27 15:23:06,974 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 10:23:08] 2025-11-27 15:23:06,978 | INFO     | traces error code: 0
[2025-11-27 10:23:08] 2025-11-27 15:23:06,978 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 10:23:08] 2025-11-27 15:23:07,222 [wrapper] ==== pilot stdout END ====
[2025-11-27 10:23:08] 2025-11-27 15:23:07,260 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 10:23:08] 2025-11-27 15:23:07,278 [wrapper] pilotpid: 2885405
[2025-11-27 10:23:08] 2025-11-27 15:23:07,290 [wrapper] Pilot exit status: 0
[2025-11-27 10:23:08] 2025-11-27 15:23:07,438 [wrapper] pandaids: 6896764134
[2025-11-27 10:23:08] 2025-11-27 15:23:07,768 [wrapper] cleanup supervisor_pilot 3234628 2885406
[2025-11-27 10:23:08] 2025-11-27 15:23:07,797 [wrapper] Test setup, not cleaning
[2025-11-27 10:23:08] 2025-11-27 15:23:07,803 [wrapper] apfmon messages muted
[2025-11-27 10:23:08] 2025-11-27 15:23:07,822 [wrapper] ==== wrapper stdout END ====
[2025-11-27 10:23:08] 2025-11-27 15:23:07,843 [wrapper] ==== wrapper stderr END ====
[2025-11-27 10:23:08]  *** Error codes and diagnostics ***
[2025-11-27 10:23:08]     "exeErrorCode": 0,
[2025-11-27 10:23:08]     "exeErrorDiag": "",
[2025-11-27 10:23:08]     "pilotErrorCode": 0,
[2025-11-27 10:23:08]     "pilotErrorDiag": "",
[2025-11-27 10:23:08]  *** Listing of results directory ***
[2025-11-27 10:23:08] total 1337988
[2025-11-27 10:23:08] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 03:00 pilot3.tar.gz
[2025-11-27 10:23:08] -rwx------. 1 boincer umatlas     36292 Nov 25 03:27 runpilot2-wrapper.sh
[2025-11-27 10:23:08] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 03:27 queuedata.json
[2025-11-27 10:23:08] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 10:23:08] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:16 run_atlas
[2025-11-27 10:23:08] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:16 job.xml
[2025-11-27 10:23:08] -rw-r--r--. 2 boincer umatlas 409328311 Nov 26 00:16 EVNT.47483658._004247.pool.root.1
[2025-11-27 10:23:08] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:16 start_atlas.sh
[2025-11-27 10:23:08] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:16 shared
[2025-11-27 10:23:08] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 00:16 input.tar.gz
[2025-11-27 10:23:08] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:16 boinc_lockfile
[2025-11-27 10:23:08] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 00:16 pandaJob.out
[2025-11-27 10:23:08] -rw-------. 1 boincer umatlas        57 Nov 26 00:16 setup.sh.local
[2025-11-27 10:23:08] -rw-------. 1 boincer umatlas    991877 Nov 26 00:16 agis_schedconf.cvmfs.json
[2025-11-27 10:23:08] drwx------. 5 boincer umatlas      4096 Nov 26 00:16 pilot3
[2025-11-27 10:23:08] -rw-r--r--. 1 boincer umatlas       533 Nov 27 10:02 boinc_task_state.xml
[2025-11-27 10:23:08] -rw-------. 1 boincer umatlas 918790850 Nov 27 10:21 HITS.47556185._000108.pool.root.1
[2025-11-27 10:23:08] -rw-------. 1 boincer umatlas      1076 Nov 27 10:21 memory_monitor_summary.json
[2025-11-27 10:23:08] -rw-------. 1 boincer umatlas   1516240 Nov 27 10:21 agis_ddmendpoints.agis.ALL.json
[2025-11-27 10:23:08] -rw-------. 1 boincer umatlas   3010713 Nov 27 10:21 log.47556185._000108.job.log.tgz.1
[2025-11-27 10:23:08] -rw-------. 1 boincer umatlas        95 Nov 27 10:22 pilot_heartbeat.json
[2025-11-27 10:23:08] -rw-------. 1 boincer umatlas      8642 Nov 27 10:22 heartbeat.json
[2025-11-27 10:23:08] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 10:22 init_data.xml
[2025-11-27 10:23:08] -rw-------. 1 boincer umatlas      5082 Nov 27 10:23 pilotlog.txt
[2025-11-27 10:23:08] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 10:23 boinc_mmap_file
[2025-11-27 10:23:08] -rw-------. 1 boincer umatlas  16018602 Nov 27 10:23 log.47556185._000108.job.log.1
[2025-11-27 10:23:08] -rw-r--r--. 1 boincer umatlas        29 Nov 27 10:23 wrapper_checkpoint.txt
[2025-11-27 10:23:08] -rw-------. 1 boincer umatlas       353 Nov 27 10:23 output.list
[2025-11-27 10:23:08] -rw-r--r--. 1 boincer umatlas       620 Nov 27 10:23 runtime_log
[2025-11-27 10:23:08] -rw-------. 1 boincer umatlas  19046400 Nov 27 10:23 result.tar.gz
[2025-11-27 10:23:08] -rw-r--r--. 1 boincer umatlas      9339 Nov 27 10:23 runtime_log.err
[2025-11-27 10:23:08] -rw-------. 1 boincer umatlas       668 Nov 27 10:23 MGQMDmeZ3h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlFMKDmS2PvPo.diag
[2025-11-27 10:23:08] -rw-r--r--. 1 boincer umatlas     21279 Nov 27 10:23 stderr.txt
[2025-11-27 10:23:08] HITS file was successfully produced:
[2025-11-27 10:23:08] -rw-------. 1 boincer umatlas 918790850 Nov 27 10:21 shared/HITS.pool.root.1
[2025-11-27 10:23:08]  *** Contents of shared directory: ***
[2025-11-27 10:23:08] total 1316200
[2025-11-27 10:23:08] -rw-r--r--. 2 boincer umatlas 409328311 Nov 26 00:16 ATLAS.root_0
[2025-11-27 10:23:08] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:16 start_atlas.sh
[2025-11-27 10:23:08] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 00:16 input.tar.gz
[2025-11-27 10:23:08] -rw-------. 1 boincer umatlas 918790850 Nov 27 10:21 HITS.pool.root.1
[2025-11-27 10:23:08] -rw-------. 1 boincer umatlas  19046400 Nov 27 10:23 result.tar.gz
10:23:10 (2879086): run_atlas exited; CPU time 213423.667107
10:23:10 (2879086): called boinc_finish(0)

</stderr_txt>
]]>

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