Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:20:28 (13697): wrapper (7.7.26015): starting
02:20:28 (13697): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 02:20:28] Arguments: --nthreads 8
[2025-11-26 02:20:28] Threads: 8
[2025-11-26 02:20:28] Checking for CVMFS
[2025-11-26 02:20:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 02:20:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 02:20:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 02:20:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 02:20:29] 2.11.2.0 2840 67327 80024 153314 3 80 18730799 20275200 1 130560 0 17616922 99.820 4518469 26787 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 02:20:29] CVMFS is ok
[2025-11-26 02:20:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 02:20:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 02:20:29] Further information can be found at the LHC@home message board.
[2025-11-26 02:20:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 02:20:29] Checking for apptainer binary...
[2025-11-26 02:20:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 02:20:29] Running /usr/bin/apptainer --version
[2025-11-26 02:20:29] apptainer version 1.3.2-1.el7
[2025-11-26 02:20:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 02:20:30] c-204-39.aglt2.org
[2025-11-26 02:20:30] apptainer works
[2025-11-26 02:20:30] Set ATHENA_PROC_NUMBER=8
[2025-11-26 02:20:30] Set ATHENA_CORE_NUMBER=8
[2025-11-26 02:20:30] Starting ATLAS job with PandaID=6895328717
[2025-11-26 02:20:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 14:45:08]  *** The last 200 lines of the pilot log: ***
[2025-11-26 14:45:08] 2025-11-26 19:44:09,303 | INFO     | monitor loop #3287: job 0:6895328717 is in state 'finished'
[2025-11-26 14:45:08] 2025-11-26 19:44:09,303 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 14:45:08] 2025-11-26 19:44:09,441 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 14:45:08] 2025-11-26 19:44:09,446 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-11-26 14:45:08] 2025-11-26 19:44:09,448 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895328717/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 14:45:08] 2025-11-26 19:44:09,449 | INFO     | extracted standard info from prmon json
[2025-11-26 14:45:08] 2025-11-26 19:44:09,449 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 14:45:08] 2025-11-26 19:44:09,450 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 14:45:08] 2025-11-26 19:44:09,463 | INFO     | fitting pss+swap vs Time
[2025-11-26 14:45:08] 2025-11-26 19:44:09,464 | INFO     | sum of square deviations: 121123135795.12167
[2025-11-26 14:45:08] 2025-11-26 19:44:09,475 | INFO     | sum of deviations: 669866767095.8403
[2025-11-26 14:45:08] 2025-11-26 19:44:09,475 | INFO     | mean x: 1764163945.5471957
[2025-11-26 14:45:08] 2025-11-26 19:44:09,475 | INFO     | mean y: 2869412.4829001366
[2025-11-26 14:45:08] 2025-11-26 19:44:09,475 | INFO     | intersect: -9753770316.773003
[2025-11-26 14:45:08] 2025-11-26 19:44:09,476 | INFO     | chi2: 5.871777339691868
[2025-11-26 14:45:08] 2025-11-26 19:44:09,477 | INFO     | sum of square deviations: 118654774301.11436
[2025-11-26 14:45:08] 2025-11-26 19:44:09,488 | INFO     | sum of deviations: 900779966578.0892
[2025-11-26 14:45:08] 2025-11-26 19:44:09,488 | INFO     | mean x: 1764163793.050964
[2025-11-26 14:45:08] 2025-11-26 19:44:09,488 | INFO     | mean y: 2883669.1597796143
[2025-11-26 14:45:08] 2025-11-26 19:44:09,488 | INFO     | intersect: -13389947861.663822
[2025-11-26 14:45:08] 2025-11-26 19:44:09,489 | INFO     | chi2: 2.9432307173499703
[2025-11-26 14:45:08] 2025-11-26 19:44:09,489 | INFO     | current chi2=2.9432307173499703 (change=49.87496038968634 %)
[2025-11-26 14:45:08] 2025-11-26 19:44:09,490 | INFO     | sum of square deviations: 116220180882.08583
[2025-11-26 14:45:08] 2025-11-26 19:44:09,501 | INFO     | sum of deviations: 1002141518175.108
[2025-11-26 14:45:08] 2025-11-26 19:44:09,501 | INFO     | mean x: 1764163640.554785
[2025-11-26 14:45:08] 2025-11-26 19:44:09,501 | INFO     | mean y: 2890014.7947295425
[2025-11-26 14:45:08] 2025-11-26 19:44:09,501 | INFO     | intersect: -15209112028.538937
[2025-11-26 14:45:08] 2025-11-26 19:44:09,502 | INFO     | chi2: 2.2993605616546287
[2025-11-26 14:45:08] 2025-11-26 19:44:09,502 | INFO     | current chi2=2.2993605616546287 (change=21.87630592123849 %)
[2025-11-26 14:45:08] 2025-11-26 19:44:09,502 | INFO     | right removable region: 720
[2025-11-26 14:45:08] 2025-11-26 19:44:09,503 | INFO     | sum of square deviations: 118654530301.1144
[2025-11-26 14:45:08] 2025-11-26 19:44:09,515 | INFO     | sum of deviations: 478551066666.41534
[2025-11-26 14:45:08] 2025-11-26 19:44:09,516 | INFO     | mean x: 1764164098.050964
[2025-11-26 14:45:08] 2025-11-26 19:44:09,516 | INFO     | mean y: 2881211.6914600553
[2025-11-26 14:45:08] 2025-11-26 19:44:09,516 | INFO     | intersect: -7112250496.760084
[2025-11-26 14:45:08] 2025-11-26 19:44:09,517 | INFO     | chi2: 3.8138581421127804
[2025-11-26 14:45:08] 2025-11-26 19:44:09,517 | INFO     | current chi2=3.8138581421127804 (change=35.04763683166298 %)
[2025-11-26 14:45:08] 2025-11-26 19:44:09,518 | INFO     | sum of square deviations: 116219825862.40244
[2025-11-26 14:45:08] 2025-11-26 19:44:09,529 | INFO     | sum of deviations: 436177320445.79535
[2025-11-26 14:45:08] 2025-11-26 19:44:09,530 | INFO     | mean x: 1764164250.5506241
[2025-11-26 14:45:08] 2025-11-26 19:44:09,530 | INFO     | mean y: 2883864.567267684
[2025-11-26 14:45:08] 2025-11-26 19:44:09,530 | INFO     | intersect: -6618090052.072961
[2025-11-26 14:45:08] 2025-11-26 19:44:09,531 | INFO     | chi2: 3.7660662879703835
[2025-11-26 14:45:08] 2025-11-26 19:44:09,531 | INFO     | current chi2=3.7660662879703835 (change=1.2531104294278097 %)
[2025-11-26 14:45:08] 2025-11-26 19:44:09,531 | INFO     | left removable region: 20
[2025-11-26 14:45:08] 2025-11-26 19:44:09,532 | INFO     | sum of square deviations: 106357675439.234
[2025-11-26 14:45:08] 2025-11-26 19:44:09,542 | INFO     | sum of deviations: 730203613644.5713
[2025-11-26 14:45:08] 2025-11-26 19:44:09,542 | INFO     | mean x: 1764164220.0628572
[2025-11-26 14:45:08] 2025-11-26 19:44:09,542 | INFO     | mean y: 2909122.714285714
[2025-11-26 14:45:08] 2025-11-26 19:44:09,542 | INFO     | intersect: -12109043148.077398
[2025-11-26 14:45:08] 2025-11-26 19:44:09,543 | INFO     | chi2: 0.09998020431830355
[2025-11-26 14:45:08] 2025-11-26 19:44:09,543 | INFO     | current memory leak: 6.87 B/s (using 700 data points, chi2=0.10)
[2025-11-26 14:45:08] 2025-11-26 19:44:09,544 | INFO     | could have reported an average CPU frequency of 2171 MHz (28 samples)
[2025-11-26 14:45:08] 2025-11-26 19:44:09,545 | INFO     | ..............................
[2025-11-26 14:45:08] 2025-11-26 19:44:09,545 | INFO     | . Timing measurements:
[2025-11-26 14:45:08] 2025-11-26 19:44:09,545 | INFO     | . get job = 0 s
[2025-11-26 14:45:08] 2025-11-26 19:44:09,545 | INFO     | . initial setup = 2 s
[2025-11-26 14:45:08] 2025-11-26 19:44:09,545 | INFO     | . payload setup = 9 s
[2025-11-26 14:45:08] 2025-11-26 19:44:09,545 | INFO     | . stage-in = 0 s
[2025-11-26 14:45:08] 2025-11-26 19:44:09,545 | INFO     | . payload execution = 44554 s
[2025-11-26 14:45:08] 2025-11-26 19:44:09,545 | INFO     | . stage-out = 4 s
[2025-11-26 14:45:08] 2025-11-26 19:44:09,545 | INFO     | . log creation = 0 s
[2025-11-26 14:45:08] 2025-11-26 19:44:09,546 | INFO     | ..............................
[2025-11-26 14:45:08] 2025-11-26 19:44:09,650 | INFO     | 
[2025-11-26 14:45:08] 2025-11-26 19:44:09,650 | INFO     | job summary report
[2025-11-26 14:45:08] 2025-11-26 19:44:09,650 | INFO     | --------------------------------------------------
[2025-11-26 14:45:08] 2025-11-26 19:44:09,651 | INFO     | PanDA job id: 6895328717
[2025-11-26 14:45:08] 2025-11-26 19:44:09,651 | INFO     | task id: 47556137
[2025-11-26 14:45:08] 2025-11-26 19:44:09,651 | INFO     | errors: (none)
[2025-11-26 14:45:08] 2025-11-26 19:44:09,651 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 14:45:08] 2025-11-26 19:44:09,651 | INFO     | pilot state: finished 
[2025-11-26 14:45:08] 2025-11-26 19:44:09,651 | INFO     | transexitcode: 0
[2025-11-26 14:45:08] 2025-11-26 19:44:09,652 | INFO     | exeerrorcode: 0
[2025-11-26 14:45:08] 2025-11-26 19:44:09,652 | INFO     | exeerrordiag: 
[2025-11-26 14:45:08] 2025-11-26 19:44:09,652 | INFO     | exitcode: 0
[2025-11-26 14:45:08] 2025-11-26 19:44:09,652 | INFO     | exitmsg: OK
[2025-11-26 14:45:08] 2025-11-26 19:44:09,652 | INFO     | cpuconsumptiontime: 344259 s
[2025-11-26 14:45:08] 2025-11-26 19:44:09,652 | INFO     | nevents: 1000
[2025-11-26 14:45:08] 2025-11-26 19:44:09,653 | INFO     | neventsw: 0
[2025-11-26 14:45:08] 2025-11-26 19:44:09,653 | INFO     | pid: 23804
[2025-11-26 14:45:08] 2025-11-26 19:44:09,653 | INFO     | pgrp: 23804
[2025-11-26 14:45:08] 2025-11-26 19:44:09,653 | INFO     | corecount: 8
[2025-11-26 14:45:08] 2025-11-26 19:44:09,653 | INFO     | event service: False
[2025-11-26 14:45:08] 2025-11-26 19:44:09,653 | INFO     | sizes: {0: 2284089, 1: 2284288, 6: 2284550, 12: 2284578, 44567: 2330391, 44568: 2330390, 44573: 2339568, 44576: 2339624, 44585: 2339870}
[2025-11-26 14:45:08] 2025-11-26 19:44:09,654 | INFO     | --------------------------------------------------
[2025-11-26 14:45:08] 2025-11-26 19:44:09,654 | INFO     | 
[2025-11-26 14:45:08] 2025-11-26 19:44:09,654 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 14:45:08] 2025-11-26 19:44:09,677 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 14:45:08] 2025-11-26 19:44:09,678 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 14:45:08] 2025-11-26 19:44:09,678 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 14:45:08] 2025-11-26 19:44:09,678 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 14:45:08] 2025-11-26 19:44:09,678 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 14:45:08] 2025-11-26 19:44:09,679 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 14:45:08] 2025-11-26 19:44:09,679 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 14:45:08] 2025-11-26 19:44:09,679 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 14:45:08] 2025-11-26 19:44:09,679 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 14:45:08] 2025-11-26 19:44:09,679 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 14:45:08] 2025-11-26 19:44:09,680 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 14:45:08] 2025-11-26 19:44:09,680 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 14:45:08] 2025-11-26 19:44:09,680 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 14:45:08] 2025-11-26 19:44:09,680 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 14:45:08] 2025-11-26 19:44:09,680 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 14:45:08] 2025-11-26 19:44:09,681 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 14:45:08] 2025-11-26 19:44:09,681 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 14:45:08] 2025-11-26 19:44:09,681 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 14:45:08] 2025-11-26 19:44:09,681 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 14:45:08] 2025-11-26 19:44:09,681 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 14:45:08] 2025-11-26 19:44:09,682 | INFO     | job 6895328717 has completed (purged errors)
[2025-11-26 14:45:08] 2025-11-26 19:44:09,682 | INFO     | overall cleanup function is called
[2025-11-26 14:45:08] 2025-11-26 19:44:10,697 | INFO     | --- collectZombieJob: --- 10, [23804]
[2025-11-26 14:45:08] 2025-11-26 19:44:10,697 | INFO     | zombie collector waiting for pid 23804
[2025-11-26 14:45:08] 2025-11-26 19:44:10,698 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 14:45:08] 2025-11-26 19:44:10,698 | INFO     | collected zombie processes
[2025-11-26 14:45:08] 2025-11-26 19:44:10,698 | INFO     | will attempt to kill all subprocesses of pid=23804
[2025-11-26 14:45:08] 2025-11-26 19:44:10,790 | INFO     | process IDs to be killed: [23804] (in reverse order)
[2025-11-26 14:45:08] 2025-11-26 19:44:10,853 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 14:45:08] 2025-11-26 19:44:10,854 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 14:45:08] 2025-11-26 19:44:10,858 | INFO     | did not find any defunct processes belonging to 23804
[2025-11-26 14:45:08] 2025-11-26 19:44:10,861 | INFO     | did not find any defunct processes belonging to 23804
[2025-11-26 14:45:08] 2025-11-26 19:44:10,864 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 14:45:08] 2025-11-26 19:44:10,864 | INFO     | ready for new job
[2025-11-26 14:45:08] 2025-11-26 19:44:10,864 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 14:45:08] 2025-11-26 19:44:10,868 | INFO     | ***************************************
[2025-11-26 14:45:08] 2025-11-26 19:44:10,868 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 14:45:08] 2025-11-26 19:44:10,868 | INFO     | ***************************************
[2025-11-26 14:45:08] 2025-11-26 19:44:10,868 | INFO     | 
[2025-11-26 14:45:08] 2025-11-26 19:44:10,869 | INFO     | architecture information:
[2025-11-26 14:45:08] 2025-11-26 19:44:10,870 | INFO     | executing command: cat /etc/os-release
[2025-11-26 14:45:08] 2025-11-26 19:44:10,887 | INFO     | cat /etc/os-release:
[2025-11-26 14:45:08] NAME="CentOS Linux"
[2025-11-26 14:45:08] VERSION="7 (Core)"
[2025-11-26 14:45:08] ID="centos"
[2025-11-26 14:45:08] ID_LIKE="rhel fedora"
[2025-11-26 14:45:08] VERSION_ID="7"
[2025-11-26 14:45:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 14:45:08] ANSI_COLOR="0;31"
[2025-11-26 14:45:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 14:45:08] HOME_URL="https://www.centos.org/"
[2025-11-26 14:45:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 14:45:08] 
[2025-11-26 14:45:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 14:45:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 14:45:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 14:45:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 14:45:08] 
[2025-11-26 14:45:08] 2025-11-26 19:44:10,888 | INFO     | ***************************************
[2025-11-26 14:45:08] 2025-11-26 19:44:11,391 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 14:45:08] 2025-11-26 19:44:11,413 | INFO     | sufficient remaining disk space (17452498944 B)
[2025-11-26 14:45:08] 2025-11-26 19:44:11,414 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 14:45:08] 2025-11-26 19:44:11,414 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 14:45:08] 2025-11-26 19:44:11,414 | INFO     | update_server=False
[2025-11-26 14:45:08] 2025-11-26 19:44:11,415 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 14:45:08] 2025-11-26 19:44:11,415 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 14:45:08] 2025-11-26 19:44:11,416 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 14:45:08] 2025-11-26 19:44:11,614 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 14:45:08] 2025-11-26 19:44:11,823 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 14:45:08] 2025-11-26 19:44:11,823 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 14:45:08] 2025-11-26 19:44:11,823 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 14:45:08] 2025-11-26 19:44:11,823 | INFO     | will abort loop
[2025-11-26 14:45:08] 2025-11-26 19:44:11,935 | INFO     | all data control threads have been joined
[2025-11-26 14:45:08] 2025-11-26 19:44:12,419 | INFO     | [job] retrieve thread has finished
[2025-11-26 14:45:08] 2025-11-26 19:44:12,421 | INFO     | [job] queue monitor thread has finished
[2025-11-26 14:45:08] 2025-11-26 19:44:12,684 | INFO     | [payload] validate_post thread has finished
[2025-11-26 14:45:08] 2025-11-26 19:44:12,690 | INFO     | [payload] failed_post thread has finished
[2025-11-26 14:45:08] 2025-11-26 19:44:12,696 | INFO     | [job] validate thread has finished
[2025-11-26 14:45:08] 2025-11-26 19:44:12,700 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 14:45:08] 2025-11-26 19:44:12,745 | INFO     | all job control threads have been joined
[2025-11-26 14:45:08] 2025-11-26 19:44:12,783 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 14:45:08] 2025-11-26 19:44:12,805 | INFO     | [data] copytool_in thread has finished
[2025-11-26 14:45:08] 2025-11-26 19:44:12,829 | INFO     | [job] job monitor thread has finished
[2025-11-26 14:45:08] 2025-11-26 19:44:12,859 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 14:45:08] 2025-11-26 19:44:12,918 | INFO     | all payload control threads have been joined
[2025-11-26 14:45:08] 2025-11-26 19:44:12,941 | INFO     | [data] control thread has finished
[2025-11-26 14:45:08] 2025-11-26 19:44:13,421 | INFO     | [data] copytool_out thread has finished
[2025-11-26 14:45:08] 2025-11-26 19:44:13,713 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 14:45:08] 2025-11-26 19:44:13,751 | INFO     | [job] control thread has finished
[2025-11-26 14:45:08] 2025-11-26 19:44:13,923 | INFO     | [payload] control thread has finished
[2025-11-26 14:45:08] 2025-11-26 19:44:15,620 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 14:45:08] 2025-11-26 19:44:41,904 | INFO     | PID=17376 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 14:45:08] 2025-11-26 19:44:41,904 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 14:45:08] 2025-11-26 19:44:41,904 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 14:45:08] 2025-11-26 19:44:41,905 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 14:45:08] 2025-11-26 19:45:01,166 | INFO     | [monitor] cgroup control has ended
[2025-11-26 14:45:08] 2025-11-26 19:45:03,017 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140189503653696)>', '<ExcThread(monitor, started 140188890142464)>']
[2025-11-26 14:45:08] 2025-11-26 19:45:04,008 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 14:45:08] 2025-11-26 19:45:04,009 | INFO     | [monitor] control thread has ended
[2025-11-26 14:45:08] 2025-11-26 19:45:08,031 | INFO     | all workflow threads have been joined
[2025-11-26 14:45:08] 2025-11-26 19:45:08,031 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 14:45:08] 2025-11-26 19:45:08,032 | INFO     | traces error code: 0
[2025-11-26 14:45:08] 2025-11-26 19:45:08,032 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 14:45:08] 2025-11-26 19:45:08,155 [wrapper] ==== pilot stdout END ====
[2025-11-26 14:45:08] 2025-11-26 19:45:08,159 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 14:45:08] 2025-11-26 19:45:08,164 [wrapper] pilotpid: 17376
[2025-11-26 14:45:08] 2025-11-26 19:45:08,169 [wrapper] Pilot exit status: 0
[2025-11-26 14:45:08] 2025-11-26 19:45:08,187 [wrapper] pandaids: 6895328717
[2025-11-26 14:45:08] 2025-11-26 19:45:08,239 [wrapper] cleanup supervisor_pilot  6666 17377
[2025-11-26 14:45:08] 2025-11-26 19:45:08,245 [wrapper] Test setup, not cleaning
[2025-11-26 14:45:08] 2025-11-26 19:45:08,250 [wrapper] apfmon messages muted
[2025-11-26 14:45:08] 2025-11-26 19:45:08,254 [wrapper] ==== wrapper stdout END ====
[2025-11-26 14:45:08] 2025-11-26 19:45:08,259 [wrapper] ==== wrapper stderr END ====
[2025-11-26 14:45:08]  *** Error codes and diagnostics ***
[2025-11-26 14:45:08]     "exeErrorCode": 0,
[2025-11-26 14:45:08]     "exeErrorDiag": "",
[2025-11-26 14:45:08]     "pilotErrorCode": 0,
[2025-11-26 14:45:08]     "pilotErrorDiag": "",
[2025-11-26 14:45:08]  *** Listing of results directory ***
[2025-11-26 14:45:08] total 1301704
[2025-11-26 14:45:08] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 12:05 pilot3.tar.gz
[2025-11-26 14:45:08] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 12:54 queuedata.json
[2025-11-26 14:45:08] -rwx------ 1 boincer umatlas     36292 Nov 21 12:54 runpilot2-wrapper.sh
[2025-11-26 14:45:08] -rw-r--r-- 1 boincer umatlas       100 Nov 26 02:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 14:45:08] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 02:20 run_atlas
[2025-11-26 14:45:08] -rw-r--r-- 1 boincer umatlas       105 Nov 26 02:20 job.xml
[2025-11-26 14:45:08] -rw-r--r-- 2 boincer umatlas 409867418 Nov 26 02:20 EVNT.47483658._000089.pool.root.1
[2025-11-26 14:45:08] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 02:20 start_atlas.sh
[2025-11-26 14:45:08] drwxrwx--x 2 boincer umatlas      4096 Nov 26 02:20 shared
[2025-11-26 14:45:08] -rw-r--r-- 2 boincer umatlas    590096 Nov 26 02:20 input.tar.gz
[2025-11-26 14:45:08] -rw-r--r-- 1 boincer umatlas         0 Nov 26 02:20 boinc_lockfile
[2025-11-26 14:45:08] -rw-r--r-- 1 boincer umatlas      2783 Nov 26 02:20 pandaJob.out
[2025-11-26 14:45:08] -rw------- 1 boincer umatlas        57 Nov 26 02:20 setup.sh.local
[2025-11-26 14:45:08] -rw------- 1 boincer umatlas    991877 Nov 26 02:20 agis_schedconf.cvmfs.json
[2025-11-26 14:45:08] drwx------ 5 boincer umatlas      4096 Nov 26 02:20 pilot3
[2025-11-26 14:45:08] -rw-r--r-- 1 boincer umatlas       533 Nov 26 14:31 boinc_task_state.xml
[2025-11-26 14:45:08] -rw-r--r-- 1 boincer umatlas      5913 Nov 26 14:40 init_data.xml
[2025-11-26 14:45:08] -rw------- 1 boincer umatlas 902911714 Nov 26 14:43 HITS.47556137._000888.pool.root.1
[2025-11-26 14:45:08] -rw------- 1 boincer umatlas        95 Nov 26 14:43 pilot_heartbeat.json
[2025-11-26 14:45:08] -rw------- 1 boincer umatlas      1064 Nov 26 14:43 memory_monitor_summary.json
[2025-11-26 14:45:08] -rw------- 1 boincer umatlas   1516240 Nov 26 14:43 agis_ddmendpoints.agis.ALL.json
[2025-11-26 14:45:08] -rw------- 1 boincer umatlas   1974740 Nov 26 14:43 log.47556137._000888.job.log.tgz.1
[2025-11-26 14:45:08] -rw------- 1 boincer umatlas      8653 Nov 26 14:44 heartbeat.json
[2025-11-26 14:45:08] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 14:44 boinc_mmap_file
[2025-11-26 14:45:08] -rw-r--r-- 1 boincer umatlas        29 Nov 26 14:44 wrapper_checkpoint.txt
[2025-11-26 14:45:08] -rw------- 1 boincer umatlas      4932 Nov 26 14:45 pilotlog.txt
[2025-11-26 14:45:08] -rw------- 1 boincer umatlas   6143979 Nov 26 14:45 log.47556137._000888.job.log.1
[2025-11-26 14:45:08] -rw------- 1 boincer umatlas       353 Nov 26 14:45 output.list
[2025-11-26 14:45:08] -rw-r--r-- 1 boincer umatlas       620 Nov 26 14:45 runtime_log
[2025-11-26 14:45:08] -rw------- 1 boincer umatlas   8140800 Nov 26 14:45 result.tar.gz
[2025-11-26 14:45:08] -rw------- 1 boincer umatlas       668 Nov 26 14:45 rX1KDm4Vkg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrbJKDmVRVb2n.diag
[2025-11-26 14:45:08] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 14:45 runtime_log.err
[2025-11-26 14:45:08] -rw-r--r-- 1 boincer umatlas     21320 Nov 26 14:45 stderr.txt
[2025-11-26 14:45:08] HITS file was successfully produced:
[2025-11-26 14:45:08] -rw------- 1 boincer umatlas 902911714 Nov 26 14:43 shared/HITS.pool.root.1
[2025-11-26 14:45:08]  *** Contents of shared directory: ***
[2025-11-26 14:45:08] total 1290572
[2025-11-26 14:45:08] -rw-r--r-- 2 boincer umatlas 409867418 Nov 26 02:20 ATLAS.root_0
[2025-11-26 14:45:08] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 02:20 start_atlas.sh
[2025-11-26 14:45:08] -rw-r--r-- 2 boincer umatlas    590096 Nov 26 02:20 input.tar.gz
[2025-11-26 14:45:08] -rw------- 1 boincer umatlas 902911714 Nov 26 14:43 HITS.pool.root.1
[2025-11-26 14:45:08] -rw------- 1 boincer umatlas   8140800 Nov 26 14:45 result.tar.gz
14:45:09 (13697): run_atlas exited; CPU time 340486.633524
14:45:09 (13697): called boinc_finish(0)

</stderr_txt>
]]>

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