Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:13:59 (270929): wrapper (7.7.26015): starting
18:13:59 (270929): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 18:13:59] Arguments: --nthreads 8
[2025-11-26 18:13:59] Threads: 8
[2025-11-26 18:13:59] Checking for CVMFS
[2025-11-26 18:13:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:14:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:14:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:14:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:14:00] 2.13.2.0 7884 37295 212436 153339 2 343 23558159 40960001 26231 16776704 0 385181690 99.728 274945148 47184 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 18:14:00] CVMFS is ok
[2025-11-26 18:14:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:14:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:14:00] Further information can be found at the LHC@home message board.
[2025-11-26 18:14:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:14:00] Checking for apptainer binary...
[2025-11-26 18:14:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:14:00] Running /usr/bin/apptainer --version
[2025-11-26 18:14:00] apptainer version 1.4.4-1.el9
[2025-11-26 18:14:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:14:00] c-208-38.aglt2.org
[2025-11-26 18:14:00] apptainer works
[2025-11-26 18:14:00] Set ATHENA_PROC_NUMBER=8
[2025-11-26 18:14:00] Set ATHENA_CORE_NUMBER=8
[2025-11-26 18:14:01] Starting ATLAS job with PandaID=6893870412
[2025-11-26 18:14:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:04:10]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:04:11] 2025-11-27 11:03:20,269 | INFO     | time since job start (42529s) is within the limit (172800.0s)
[2025-11-27 06:04:11] 2025-11-27 11:03:20,578 | INFO     | monitor loop #2557: job 0:6893870412 is in state 'finished'
[2025-11-27 06:04:11] 2025-11-27 11:03:20,578 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:04:11] 2025-11-27 11:03:22,276 | INFO     | time since job start (42531s) is within the limit (172800.0s)
[2025-11-27 06:04:11] 2025-11-27 11:03:23,086 | INFO     | monitor loop #2558: job 0:6893870412 is in state 'finished'
[2025-11-27 06:04:11] 2025-11-27 11:03:23,086 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:04:11] 2025-11-27 11:03:24,284 | INFO     | time since job start (42533s) is within the limit (172800.0s)
[2025-11-27 06:04:11] 2025-11-27 11:03:25,593 | INFO     | monitor loop #2559: job 0:6893870412 is in state 'finished'
[2025-11-27 06:04:11] 2025-11-27 11:03:25,593 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:04:11] 2025-11-27 11:03:26,291 | INFO     | time since job start (42535s) is within the limit (172800.0s)
[2025-11-27 06:04:11] 2025-11-27 11:03:28,098 | INFO     | monitor loop #2560: job 0:6893870412 is in state 'finished'
[2025-11-27 06:04:11] 2025-11-27 11:03:28,098 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:04:11] 2025-11-27 11:03:28,297 | INFO     | time since job start (42537s) is within the limit (172800.0s)
[2025-11-27 06:04:11] 2025-11-27 11:03:30,304 | INFO     | time since job start (42539s) is within the limit (172800.0s)
[2025-11-27 06:04:11] 2025-11-27 11:03:30,606 | INFO     | monitor loop #2561: job 0:6893870412 is in state 'finished'
[2025-11-27 06:04:11] 2025-11-27 11:03:30,606 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:04:11] 2025-11-27 11:03:31,531 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 06:04:11] 2025-11-27 11:03:31,641 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3734.9143984375023
[2025-11-27 06:04:11] 2025-11-27 11:03:31,883 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6893870412/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 06:04:11] 2025-11-27 11:03:31,884 | INFO     | extracted standard info from prmon json
[2025-11-27 06:04:11] 2025-11-27 11:03:31,884 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 06:04:11] 2025-11-27 11:03:31,884 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 06:04:11] 2025-11-27 11:03:32,018 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:04:11] 2025-11-27 11:03:32,019 | INFO     | sum of square deviations: 104549017825.10208
[2025-11-27 06:04:11] 2025-11-27 11:03:32,095 | INFO     | sum of deviations: -155476094310.81036
[2025-11-27 06:04:11] 2025-11-27 11:03:32,167 | INFO     | mean x: 1764220132.869253
[2025-11-27 06:04:11] 2025-11-27 11:03:32,168 | INFO     | mean y: 2856418.672413793
[2025-11-27 06:04:11] 2025-11-27 11:03:32,168 | INFO     | intersect: 2626449269.844591
[2025-11-27 06:04:11] 2025-11-27 11:03:32,168 | INFO     | chi2: 18.777231016879522
[2025-11-27 06:04:11] 2025-11-27 11:03:32,168 | INFO     | sum of square deviations: 102312742212.93224
[2025-11-27 06:04:11] 2025-11-27 11:03:32,251 | INFO     | sum of deviations: 78628493979.9791
[2025-11-27 06:04:11] 2025-11-27 11:03:32,252 | INFO     | mean x: 1764219980.3936324
[2025-11-27 06:04:11] 2025-11-27 11:03:32,252 | INFO     | mean y: 2872376.040520984
[2025-11-27 06:04:11] 2025-11-27 11:03:32,252 | INFO     | intersect: -1352950536.21259
[2025-11-27 06:04:11] 2025-11-27 11:03:32,252 | INFO     | chi2: 15.200622224873547
[2025-11-27 06:04:11] 2025-11-27 11:03:32,331 | INFO     | current chi2=15.200622224873547 (change=19.047583686811087 %)
[2025-11-27 06:04:11] 2025-11-27 11:03:32,331 | INFO     | right removable region: 690
[2025-11-27 06:04:11] 2025-11-27 11:03:32,332 | INFO     | sum of square deviations: 102311353980.71771
[2025-11-27 06:04:11] 2025-11-27 11:03:32,317 | INFO     | time since job start (42541s) is within the limit (172800.0s)
[2025-11-27 06:04:11] 2025-11-27 11:03:32,430 | INFO     | sum of deviations: -320715328032.81757
[2025-11-27 06:04:11] 2025-11-27 11:03:32,472 | INFO     | mean x: 1764220285.3921852
[2025-11-27 06:04:11] 2025-11-27 11:03:32,473 | INFO     | mean y: 2867654.7004341534
[2025-11-27 06:04:11] 2025-11-27 11:03:32,473 | INFO     | intersect: 5533167719.523567
[2025-11-27 06:04:11] 2025-11-27 11:03:32,473 | INFO     | chi2: 16.911863936176612
[2025-11-27 06:04:11] 2025-11-27 11:03:32,473 | INFO     | current chi2=16.911863936176612 (change=9.934196788792049 %)
[2025-11-27 06:04:11] 2025-11-27 11:03:32,473 | INFO     | left removable region: 10
[2025-11-27 06:04:11] 2025-11-27 11:03:32,474 | INFO     | sum of square deviations: 97503090727.64742
[2025-11-27 06:04:11] 2025-11-27 11:03:32,527 | INFO     | sum of deviations: -80572863950.76474
[2025-11-27 06:04:11] 2025-11-27 11:03:32,527 | INFO     | mean x: 1764220254.9411764
[2025-11-27 06:04:11] 2025-11-27 11:03:32,527 | INFO     | mean y: 2889569.055882353
[2025-11-27 06:04:11] 2025-11-27 11:03:32,527 | INFO     | intersect: 1460774416.8051462
[2025-11-27 06:04:11] 2025-11-27 11:03:32,528 | INFO     | chi2: 12.628870606872555
[2025-11-27 06:04:11] 2025-11-27 11:03:32,528 | INFO     | current memory leak: -0.83 B/s (using 680 data points, chi2=12.63)
[2025-11-27 06:04:11] 2025-11-27 11:03:32,573 | INFO     | could have reported an average CPU frequency of 3734 MHz (27 samples)
[2025-11-27 06:04:11] 2025-11-27 11:03:32,573 | INFO     | ..............................
[2025-11-27 06:04:11] 2025-11-27 11:03:32,573 | INFO     | . Timing measurements:
[2025-11-27 06:04:11] 2025-11-27 11:03:32,573 | INFO     | . get job = 0 s
[2025-11-27 06:04:11] 2025-11-27 11:03:32,573 | INFO     | . initial setup = 3 s
[2025-11-27 06:04:11] 2025-11-27 11:03:32,573 | INFO     | . payload setup = 16 s
[2025-11-27 06:04:11] 2025-11-27 11:03:32,573 | INFO     | . stage-in = 0 s
[2025-11-27 06:04:11] 2025-11-27 11:03:32,574 | INFO     | . payload execution = 42446 s
[2025-11-27 06:04:11] 2025-11-27 11:03:32,574 | INFO     | . stage-out = 6 s
[2025-11-27 06:04:11] 2025-11-27 11:03:32,574 | INFO     | . log creation = 1 s
[2025-11-27 06:04:11] 2025-11-27 11:03:32,574 | INFO     | ..............................
[2025-11-27 06:04:11] 2025-11-27 11:03:32,783 | INFO     | 
[2025-11-27 06:04:11] 2025-11-27 11:03:32,787 | INFO     | job summary report
[2025-11-27 06:04:11] 2025-11-27 11:03:32,787 | INFO     | --------------------------------------------------
[2025-11-27 06:04:11] 2025-11-27 11:03:32,787 | INFO     | PanDA job id: 6893870412
[2025-11-27 06:04:11] 2025-11-27 11:03:32,787 | INFO     | task id: 47523449
[2025-11-27 06:04:11] 2025-11-27 11:03:32,788 | INFO     | errors: (none)
[2025-11-27 06:04:11] 2025-11-27 11:03:32,788 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:04:11] 2025-11-27 11:03:32,788 | INFO     | pilot state: finished 
[2025-11-27 06:04:11] 2025-11-27 11:03:32,788 | INFO     | transexitcode: 0
[2025-11-27 06:04:11] 2025-11-27 11:03:32,788 | INFO     | exeerrorcode: 0
[2025-11-27 06:04:11] 2025-11-27 11:03:32,788 | INFO     | exeerrordiag: 
[2025-11-27 06:04:11] 2025-11-27 11:03:32,788 | INFO     | exitcode: 0
[2025-11-27 06:04:11] 2025-11-27 11:03:32,788 | INFO     | exitmsg: OK
[2025-11-27 06:04:11] 2025-11-27 11:03:32,788 | INFO     | cpuconsumptiontime: 139251 s
[2025-11-27 06:04:11] 2025-11-27 11:03:32,788 | INFO     | nevents: 1000
[2025-11-27 06:04:11] 2025-11-27 11:03:32,788 | INFO     | neventsw: 0
[2025-11-27 06:04:11] 2025-11-27 11:03:32,788 | INFO     | pid: 302741
[2025-11-27 06:04:11] 2025-11-27 11:03:32,788 | INFO     | pgrp: 302741
[2025-11-27 06:04:11] 2025-11-27 11:03:32,788 | INFO     | corecount: 8
[2025-11-27 06:04:11] 2025-11-27 11:03:32,788 | INFO     | event service: False
[2025-11-27 06:04:11] 2025-11-27 11:03:32,788 | INFO     | sizes: {0: 2284314, 11: 2284314, 13: 2284604, 21: 2284660, 42465: 2329754, 42472: 2338932, 42506: 2339122}
[2025-11-27 06:04:11] 2025-11-27 11:03:32,788 | INFO     | --------------------------------------------------
[2025-11-27 06:04:11] 2025-11-27 11:03:32,788 | INFO     | 
[2025-11-27 06:04:11] 2025-11-27 11:03:32,788 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 06:04:11] 2025-11-27 11:03:32,872 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:04:11] 2025-11-27 11:03:32,873 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:04:11] 2025-11-27 11:03:32,873 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:04:11] 2025-11-27 11:03:32,873 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:04:11] 2025-11-27 11:03:32,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:04:11] 2025-11-27 11:03:32,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:04:11] 2025-11-27 11:03:32,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:04:11] 2025-11-27 11:03:32,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:04:11] 2025-11-27 11:03:32,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:04:11] 2025-11-27 11:03:32,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:04:11] 2025-11-27 11:03:32,873 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:04:11] 2025-11-27 11:03:32,873 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:04:11] 2025-11-27 11:03:32,873 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:04:11] 2025-11-27 11:03:32,873 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:04:11] 2025-11-27 11:03:32,873 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:04:11] 2025-11-27 11:03:32,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:04:11] 2025-11-27 11:03:32,873 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:04:11] 2025-11-27 11:03:32,873 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:04:11] 2025-11-27 11:03:32,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:04:11] 2025-11-27 11:03:32,873 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:04:11] 2025-11-27 11:03:32,874 | INFO     | job 6893870412 has completed (purged errors)
[2025-11-27 06:04:11] 2025-11-27 11:03:32,874 | INFO     | overall cleanup function is called
[2025-11-27 06:04:11] 2025-11-27 11:03:33,965 | INFO     | --- collectZombieJob: --- 10, [302741]
[2025-11-27 06:04:11] 2025-11-27 11:03:33,965 | INFO     | zombie collector waiting for pid 302741
[2025-11-27 06:04:11] 2025-11-27 11:03:33,965 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:04:11] 2025-11-27 11:03:33,965 | INFO     | collected zombie processes
[2025-11-27 06:04:11] 2025-11-27 11:03:33,966 | INFO     | will attempt to kill all subprocesses of pid=302741
[2025-11-27 06:04:11] 2025-11-27 11:03:35,105 | INFO     | process IDs to be killed: [302741] (in reverse order)
[2025-11-27 06:04:11] 2025-11-27 11:03:35,383 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:04:11] 2025-11-27 11:03:35,383 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:04:11] 2025-11-27 11:03:35,405 | INFO     | did not find any defunct processes belonging to 302741
[2025-11-27 06:04:11] 2025-11-27 11:03:35,435 | INFO     | did not find any defunct processes belonging to 302741
[2025-11-27 06:04:11] 2025-11-27 11:03:35,442 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:04:11] 2025-11-27 11:03:35,442 | INFO     | ready for new job
[2025-11-27 06:04:11] 2025-11-27 11:03:35,442 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:04:11] 2025-11-27 11:03:35,449 | INFO     | ***************************************
[2025-11-27 06:04:11] 2025-11-27 11:03:35,449 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:04:11] 2025-11-27 11:03:35,449 | INFO     | ***************************************
[2025-11-27 06:04:11] 2025-11-27 11:03:35,449 | INFO     | 
[2025-11-27 06:04:11] 2025-11-27 11:03:35,466 | INFO     | architecture information:
[2025-11-27 06:04:11] 2025-11-27 11:03:35,471 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:04:11] 2025-11-27 11:03:35,561 | INFO     | cat /etc/os-release:
[2025-11-27 06:04:11] NAME="CentOS Linux"
[2025-11-27 06:04:11] VERSION="7 (Core)"
[2025-11-27 06:04:11] ID="centos"
[2025-11-27 06:04:11] ID_LIKE="rhel fedora"
[2025-11-27 06:04:11] VERSION_ID="7"
[2025-11-27 06:04:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:04:11] ANSI_COLOR="0;31"
[2025-11-27 06:04:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:04:11] HOME_URL="https://www.centos.org/"
[2025-11-27 06:04:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:04:11] 
[2025-11-27 06:04:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:04:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:04:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:04:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:04:11] 
[2025-11-27 06:04:11] 2025-11-27 11:03:35,561 | INFO     | ***************************************
[2025-11-27 06:04:11] 2025-11-27 11:03:36,064 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 06:04:11] 2025-11-27 11:03:36,126 | INFO     | sufficient remaining disk space (156658302976 B)
[2025-11-27 06:04:11] 2025-11-27 11:03:36,134 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:04:11] 2025-11-27 11:03:36,135 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:04:11] 2025-11-27 11:03:36,135 | INFO     | update_server=False
[2025-11-27 06:04:11] 2025-11-27 11:03:36,135 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:04:11] 2025-11-27 11:03:36,325 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:04:11] 2025-11-27 11:03:36,338 | INFO     | all data control threads have been joined
[2025-11-27 06:04:11] 2025-11-27 11:03:36,432 | INFO     | all payload control threads have been joined
[2025-11-27 06:04:11] 2025-11-27 11:03:36,627 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:04:11] 2025-11-27 11:03:36,628 | INFO     | aborting loop
[2025-11-27 06:04:11] 2025-11-27 11:03:36,700 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:04:11] 2025-11-27 11:03:37,154 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:04:11] 2025-11-27 11:03:37,301 | INFO     | all job control threads have been joined
[2025-11-27 06:04:11] 2025-11-27 11:03:37,364 | INFO     | [data] control thread has finished
[2025-11-27 06:04:11] 2025-11-27 11:03:37,447 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:04:11] 2025-11-27 11:03:37,454 | INFO     | [payload] control thread has finished
[2025-11-27 06:04:11] 2025-11-27 11:03:37,485 | INFO     | [job] validate thread has finished
[2025-11-27 06:04:11] 2025-11-27 11:03:37,566 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:04:11] 2025-11-27 11:03:37,620 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:04:11] 2025-11-27 11:03:37,633 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:04:11] 2025-11-27 11:03:37,798 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:04:11] 2025-11-27 11:03:37,962 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:04:11] 2025-11-27 11:03:38,166 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:04:11] 2025-11-27 11:03:38,272 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:04:11] 2025-11-27 11:03:38,308 | INFO     | [job] control thread has finished
[2025-11-27 06:04:11] 2025-11-27 11:03:38,408 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:04:11] 2025-11-27 11:03:38,706 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:04:11] 2025-11-27 11:03:38,804 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:04:11] 2025-11-27 11:03:40,344 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:04:11] 2025-11-27 11:03:49,509 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:04:11] 2025-11-27 11:03:50,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140570521659200)>', '<ExcThread(monitor, started 140570026559232)>']
[2025-11-27 06:04:11] 2025-11-27 11:03:55,542 | INFO     | all workflow threads have been joined
[2025-11-27 06:04:11] 2025-11-27 11:03:55,544 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:04:11] 2025-11-27 11:03:55,544 | INFO     | traces error code: 0
[2025-11-27 06:04:11] 2025-11-27 11:03:55,544 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:04:11] 2025-11-27 11:04:07,508 | INFO     | PID=279211 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 06:04:11] 2025-11-27 11:04:07,510 | INFO     | .. there are 33 such processes running
[2025-11-27 06:04:11] 2025-11-27 11:04:07,511 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:04:11] 2025-11-27 11:04:07,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:04:11] 2025-11-27 11:04:07,511 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:04:11] 2025-11-27 11:04:07,511 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:04:11] 2025-11-27 11:04:07,511 | INFO     | [monitor] control thread has ended
[2025-11-27 06:04:11] 2025-11-27 11:04:07,940 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:04:11] 2025-11-27 11:04:07,984 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:04:11] 2025-11-27 11:04:08,010 [wrapper] pilotpid: 279211
[2025-11-27 06:04:11] 2025-11-27 11:04:08,038 [wrapper] Pilot exit status: 0
[2025-11-27 06:04:11] 2025-11-27 11:04:08,172 [wrapper] pandaids: 6893870412
[2025-11-27 06:04:11] 2025-11-27 11:04:09,542 [wrapper] cleanup supervisor_pilot 3429537 279212
[2025-11-27 06:04:11] 2025-11-27 11:04:09,560 [wrapper] Test setup, not cleaning
[2025-11-27 06:04:11] 2025-11-27 11:04:09,590 [wrapper] apfmon messages muted
[2025-11-27 06:04:11] 2025-11-27 11:04:09,621 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:04:11] 2025-11-27 11:04:09,638 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:04:11]  *** Error codes and diagnostics ***
[2025-11-27 06:04:11]     "exeErrorCode": 0,
[2025-11-27 06:04:11]     "exeErrorDiag": "",
[2025-11-27 06:04:11]     "pilotErrorCode": 0,
[2025-11-27 06:04:11]     "pilotErrorDiag": "",
[2025-11-27 06:04:11]  *** Listing of results directory ***
[2025-11-27 06:04:11] total 1312584
[2025-11-27 06:04:11] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 09:50 pilot3.tar.gz
[2025-11-27 06:04:11] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 09:52 queuedata.json
[2025-11-27 06:04:11] -rwx------. 1 boincer umatlas     36292 Nov 20 09:54 runpilot2-wrapper.sh
[2025-11-27 06:04:11] -rw-r--r--. 1 boincer umatlas       100 Nov 26 18:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:04:11] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 18:13 run_atlas
[2025-11-27 06:04:11] -rw-r--r--. 1 boincer umatlas       105 Nov 26 18:13 job.xml
[2025-11-27 06:04:11] -rw-r--r--. 2 boincer umatlas 409372977 Nov 26 18:13 EVNT.47493127._000655.pool.root.1
[2025-11-27 06:04:11] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 18:13 shared
[2025-11-27 06:04:11] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 18:13 input.tar.gz
[2025-11-27 06:04:11] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:13 start_atlas.sh
[2025-11-27 06:04:11] -rw-r--r--. 1 boincer umatlas         0 Nov 26 18:13 boinc_lockfile
[2025-11-27 06:04:11] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 18:14 pandaJob.out
[2025-11-27 06:04:11] -rw-r--r--. 1 boincer umatlas      2073 Nov 26 18:14 stderr.txt
[2025-11-27 06:04:11] -rw-------. 1 boincer umatlas        57 Nov 26 18:14 setup.sh.local
[2025-11-27 06:04:11] -rw-------. 1 boincer umatlas    991546 Nov 26 18:14 agis_schedconf.cvmfs.json
[2025-11-27 06:04:11] drwx------. 5 boincer umatlas      4096 Nov 26 18:14 pilot3
[2025-11-27 06:04:11] -rw-r--r--. 1 boincer umatlas       533 Nov 27 05:34 boinc_task_state.xml
[2025-11-27 06:04:11] -rw-------. 1 boincer umatlas 916237238 Nov 27 06:01 HITS.47523449._006543.pool.root.1
[2025-11-27 06:04:11] -rw-------. 1 boincer umatlas      1079 Nov 27 06:02 memory_monitor_summary.json
[2025-11-27 06:04:11] -rw-------. 1 boincer umatlas   1516240 Nov 27 06:02 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:04:11] -rw-------. 1 boincer umatlas   1899517 Nov 27 06:02 log.47523449._006543.job.log.tgz.1
[2025-11-27 06:04:11] -rw-------. 1 boincer umatlas      8645 Nov 27 06:03 heartbeat.json
[2025-11-27 06:04:11] -rw-r--r--. 1 boincer umatlas      7175 Nov 27 06:04 init_data.xml
[2025-11-27 06:04:11] -rw-r--r--. 1 boincer umatlas        29 Nov 27 06:04 wrapper_checkpoint.txt
[2025-11-27 06:04:11] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 06:04 boinc_mmap_file
[2025-11-27 06:04:11] -rw-------. 1 boincer umatlas       822 Nov 27 06:04 pilotlog.txt
[2025-11-27 06:04:11] -rw-------. 1 boincer umatlas        95 Nov 27 06:04 pilot_heartbeat.json
[2025-11-27 06:04:11] -rw-------. 1 boincer umatlas   5390008 Nov 27 06:04 log.47523449._006543.job.log.1
[2025-11-27 06:04:11] -rw-------. 1 boincer umatlas       353 Nov 27 06:04 output.list
[2025-11-27 06:04:11] -rw-r--r--. 1 boincer umatlas       620 Nov 27 06:04 runtime_log
[2025-11-27 06:04:11] -rw-------. 1 boincer umatlas   7311360 Nov 27 06:04 result.tar.gz
[2025-11-27 06:04:11] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 06:04 runtime_log.err
[2025-11-27 06:04:11] -rw-------. 1 boincer umatlas       666 Nov 27 06:04 2jbMDmAELg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQpGKDmMjethn.diag
[2025-11-27 06:04:11] HITS file was successfully produced:
[2025-11-27 06:04:11] -rw-------. 1 boincer umatlas 916237238 Nov 27 06:01 shared/HITS.pool.root.1
[2025-11-27 06:04:11]  *** Contents of shared directory: ***
[2025-11-27 06:04:11] total 1302288
[2025-11-27 06:04:11] -rw-r--r--. 2 boincer umatlas 409372977 Nov 26 18:13 ATLAS.root_0
[2025-11-27 06:04:11] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 18:13 input.tar.gz
[2025-11-27 06:04:11] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:13 start_atlas.sh
[2025-11-27 06:04:11] -rw-------. 1 boincer umatlas 916237238 Nov 27 06:01 HITS.pool.root.1
[2025-11-27 06:04:11] -rw-------. 1 boincer umatlas   7311360 Nov 27 06:04 result.tar.gz
06:04:13 (270929): run_atlas exited; CPU time 139742.034930
06:04:13 (270929): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN