Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:13:13 (2731464): wrapper (7.7.26015): starting
00:13:13 (2731464): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:13:13] Arguments: --nthreads 8
[2025-11-26 00:13:13] Threads: 8
[2025-11-26 00:13:13] Checking for CVMFS
[2025-11-26 00:13:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:13:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:13:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:13:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:13:17] 2.13.3.0 10299 29614 382952 153310 2 79 29213184 32935937 54819 16776704 0 291846453 99.814 134507740 28773 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:13:17] CVMFS is ok
[2025-11-26 00:13:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:13:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:13:17] Further information can be found at the LHC@home message board.
[2025-11-26 00:13:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:13:17] Checking for apptainer binary...
[2025-11-26 00:13:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:13:17] Running /usr/bin/apptainer --version
[2025-11-26 00:13:17] apptainer version 1.4.4-1.el9
[2025-11-26 00:13:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:13:17] c-3-40.aglt2.org
[2025-11-26 00:13:17] apptainer works
[2025-11-26 00:13:17] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:13:17] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:13:18] Starting ATLAS job with PandaID=6891584316
[2025-11-26 00:13:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 21:13:42]  *** The last 200 lines of the pilot log: ***
[2025-11-26 21:13:42] 2025-11-27 02:12:57,379 | INFO     | time since job start (75515s) is within the limit (172800.0s)
[2025-11-26 21:13:42] 2025-11-27 02:12:58,626 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 21:13:42] 2025-11-27 02:12:58,640 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 2974.6765374999995
[2025-11-26 21:13:42] 2025-11-27 02:12:58,655 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6891584316/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 21:13:42] 2025-11-27 02:12:58,655 | INFO     | extracted standard info from prmon json
[2025-11-26 21:13:42] 2025-11-27 02:12:58,655 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 21:13:42] 2025-11-27 02:12:58,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 21:13:42] 2025-11-27 02:12:58,672 | INFO     | fitting pss+swap vs Time
[2025-11-26 21:13:42] 2025-11-27 02:12:58,674 | INFO     | sum of square deviations: 584067625541.94
[2025-11-26 21:13:42] 2025-11-27 02:12:58,721 | INFO     | sum of deviations: 3865980072276.213
[2025-11-26 21:13:42] 2025-11-27 02:12:58,721 | INFO     | mean x: 1764171854.702834
[2025-11-26 21:13:42] 2025-11-27 02:12:58,722 | INFO     | mean y: 2877640.1967611336
[2025-11-26 21:13:42] 2025-11-27 02:12:58,722 | INFO     | intersect: -11674285989.65415
[2025-11-26 21:13:42] 2025-11-27 02:12:58,724 | INFO     | chi2: 13.600533631407158
[2025-11-26 21:13:42] 2025-11-27 02:12:58,725 | INFO     | sum of square deviations: 577002748419.8813
[2025-11-26 21:13:42] 2025-11-27 02:12:58,755 | INFO     | sum of deviations: 4297275984163.1855
[2025-11-26 21:13:42] 2025-11-27 02:12:58,755 | INFO     | mean x: 1764171702.2097561
[2025-11-26 21:13:42] 2025-11-27 02:12:58,756 | INFO     | mean y: 2886949.251219512
[2025-11-26 21:13:42] 2025-11-27 02:12:58,756 | INFO     | intersect: -13135928608.572655
[2025-11-26 21:13:42] 2025-11-27 02:12:58,757 | INFO     | chi2: 10.243445925052573
[2025-11-26 21:13:42] 2025-11-27 02:12:58,757 | INFO     | current chi2=10.243445925052573 (change=24.683499907696266 %)
[2025-11-26 21:13:42] 2025-11-27 02:12:58,757 | INFO     | right removable region: 1229
[2025-11-26 21:13:42] 2025-11-27 02:12:58,758 | INFO     | sum of square deviations: 577001465589.8826
[2025-11-26 21:13:42] 2025-11-27 02:12:58,793 | INFO     | sum of deviations: 3362046287330.8804
[2025-11-26 21:13:42] 2025-11-27 02:12:58,793 | INFO     | mean x: 1764172007.2097561
[2025-11-26 21:13:42] 2025-11-27 02:12:58,793 | INFO     | mean y: 2888515.2601626017
[2025-11-26 21:13:42] 2025-11-27 02:12:58,793 | INFO     | intersect: -10276509893.180601
[2025-11-26 21:13:42] 2025-11-27 02:12:58,795 | INFO     | chi2: 9.246470161144488
[2025-11-26 21:13:42] 2025-11-27 02:12:58,795 | INFO     | current chi2=9.246470161144488 (change=32.01391642610264 %)
[2025-11-26 21:13:42] 2025-11-27 02:12:58,796 | INFO     | sum of square deviations: 569992516012.7067
[2025-11-26 21:13:42] 2025-11-27 02:12:58,834 | INFO     | sum of deviations: 2922224999566.9575
[2025-11-26 21:13:42] 2025-11-27 02:12:58,835 | INFO     | mean x: 1764172159.7167346
[2025-11-26 21:13:42] 2025-11-27 02:12:58,835 | INFO     | mean y: 2898084.0604081634
[2025-11-26 21:13:42] 2025-11-27 02:12:58,835 | INFO     | intersect: -9041620648.794933
[2025-11-26 21:13:42] 2025-11-27 02:12:58,836 | INFO     | chi2: 6.046473215161275
[2025-11-26 21:13:42] 2025-11-27 02:12:58,836 | INFO     | current chi2=6.046473215161275 (change=34.607768047857206 %)
[2025-11-26 21:13:42] 2025-11-27 02:12:58,838 | INFO     | sum of square deviations: 563040842789.6875
[2025-11-26 21:13:42] 2025-11-27 02:12:58,877 | INFO     | sum of deviations: 2744280335162.3706
[2025-11-26 21:13:42] 2025-11-27 02:12:58,877 | INFO     | mean x: 1764172312.220492
[2025-11-26 21:13:42] 2025-11-27 02:12:58,878 | INFO     | mean y: 2901983.545081967
[2025-11-26 21:13:42] 2025-11-27 02:12:58,878 | INFO     | intersect: -8595734236.6572
[2025-11-26 21:13:42] 2025-11-27 02:12:58,879 | INFO     | chi2: 5.507535625809448
[2025-11-26 21:13:42] 2025-11-27 02:12:58,879 | INFO     | current chi2=5.507535625809448 (change=8.913255217941996 %)
[2025-11-26 21:13:42] 2025-11-27 02:12:58,879 | INFO     | left removable region: 30
[2025-11-26 21:13:42] 2025-11-27 02:12:58,880 | INFO     | sum of square deviations: 534463637468.9595
[2025-11-26 21:13:42] 2025-11-27 02:12:58,909 | INFO     | monitor loop #4111: job 0:6891584316 is in state 'finished'
[2025-11-26 21:13:42] 2025-11-27 02:12:58,909 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:13:42] 2025-11-27 02:12:58,943 | INFO     | sum of deviations: 3052345442371.3335
[2025-11-26 21:13:42] 2025-11-27 02:12:58,943 | INFO     | mean x: 1764172586.7214346
[2025-11-26 21:13:42] 2025-11-27 02:12:58,943 | INFO     | mean y: 2918887.17764804
[2025-11-26 21:13:42] 2025-11-27 02:12:58,943 | INFO     | intersect: -10072348684.132772
[2025-11-26 21:13:42] 2025-11-27 02:12:58,945 | INFO     | chi2: 1.053920998922587
[2025-11-26 21:13:42] 2025-11-27 02:12:58,945 | INFO     | current memory leak: 5.71 B/s (using 1199 data points, chi2=1.05)
[2025-11-26 21:13:42] 2025-11-27 02:12:58,946 | INFO     | could have reported an average CPU frequency of 2954 MHz (45 samples)
[2025-11-26 21:13:42] 2025-11-27 02:12:58,946 | INFO     | ..............................
[2025-11-26 21:13:42] 2025-11-27 02:12:58,947 | INFO     | . Timing measurements:
[2025-11-26 21:13:42] 2025-11-27 02:12:58,952 | INFO     | . get job = 0 s
[2025-11-26 21:13:42] 2025-11-27 02:12:58,952 | INFO     | . initial setup = 4 s
[2025-11-26 21:13:42] 2025-11-27 02:12:58,952 | INFO     | . payload setup = 53 s
[2025-11-26 21:13:42] 2025-11-27 02:12:58,952 | INFO     | . stage-in = 0 s
[2025-11-26 21:13:42] 2025-11-27 02:12:58,952 | INFO     | . payload execution = 75366 s
[2025-11-26 21:13:42] 2025-11-27 02:12:58,952 | INFO     | . stage-out = 6 s
[2025-11-26 21:13:42] 2025-11-27 02:12:58,952 | INFO     | . log creation = 0 s
[2025-11-26 21:13:42] 2025-11-27 02:12:58,952 | INFO     | ..............................
[2025-11-26 21:13:42] 2025-11-27 02:12:59,216 | INFO     | 
[2025-11-26 21:13:42] 2025-11-27 02:12:59,216 | INFO     | job summary report
[2025-11-26 21:13:42] 2025-11-27 02:12:59,216 | INFO     | --------------------------------------------------
[2025-11-26 21:13:42] 2025-11-27 02:12:59,216 | INFO     | PanDA job id: 6891584316
[2025-11-26 21:13:42] 2025-11-27 02:12:59,216 | INFO     | task id: 47493068
[2025-11-26 21:13:42] 2025-11-27 02:12:59,217 | INFO     | errors: (none)
[2025-11-26 21:13:42] 2025-11-27 02:12:59,221 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 21:13:42] 2025-11-27 02:12:59,221 | INFO     | pilot state: finished 
[2025-11-26 21:13:42] 2025-11-27 02:12:59,221 | INFO     | transexitcode: 0
[2025-11-26 21:13:42] 2025-11-27 02:12:59,221 | INFO     | exeerrorcode: 0
[2025-11-26 21:13:42] 2025-11-27 02:12:59,221 | INFO     | exeerrordiag: 
[2025-11-26 21:13:42] 2025-11-27 02:12:59,221 | INFO     | exitcode: 0
[2025-11-26 21:13:42] 2025-11-27 02:12:59,221 | INFO     | exitmsg: OK
[2025-11-26 21:13:42] 2025-11-27 02:12:59,221 | INFO     | cpuconsumptiontime: 252318 s
[2025-11-26 21:13:42] 2025-11-27 02:12:59,221 | INFO     | nevents: 1000
[2025-11-26 21:13:42] 2025-11-27 02:12:59,221 | INFO     | neventsw: 0
[2025-11-26 21:13:42] 2025-11-27 02:12:59,221 | INFO     | pid: 2761504
[2025-11-26 21:13:42] 2025-11-27 02:12:59,222 | INFO     | pgrp: 2761504
[2025-11-26 21:13:42] 2025-11-27 02:12:59,222 | INFO     | corecount: 8
[2025-11-26 21:13:42] 2025-11-27 02:12:59,222 | INFO     | event service: False
[2025-11-26 21:13:42] 2025-11-27 02:12:59,222 | INFO     | sizes: {0: 2284304, 1: 2284304, 11: 2284332, 22: 2284360, 32: 2284650, 33: 2284678, 75423: 2344173, 75424: 2344172, 75431: 2353222, 75434: 2353278, 75449: 2353302}
[2025-11-26 21:13:42] 2025-11-27 02:12:59,222 | INFO     | --------------------------------------------------
[2025-11-26 21:13:42] 2025-11-27 02:12:59,222 | INFO     | 
[2025-11-26 21:13:42] 2025-11-27 02:12:59,222 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-26 21:13:42] 2025-11-27 02:12:59,282 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 21:13:42] 2025-11-27 02:12:59,283 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 21:13:42] 2025-11-27 02:12:59,283 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 21:13:42] 2025-11-27 02:12:59,283 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 21:13:42] 2025-11-27 02:12:59,283 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 21:13:42] 2025-11-27 02:12:59,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 21:13:42] 2025-11-27 02:12:59,283 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 21:13:42] 2025-11-27 02:12:59,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 21:13:42] 2025-11-27 02:12:59,283 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 21:13:42] 2025-11-27 02:12:59,283 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 21:13:42] 2025-11-27 02:12:59,283 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 21:13:42] 2025-11-27 02:12:59,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 21:13:42] 2025-11-27 02:12:59,284 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 21:13:42] 2025-11-27 02:12:59,284 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 21:13:42] 2025-11-27 02:12:59,284 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 21:13:42] 2025-11-27 02:12:59,284 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 21:13:42] 2025-11-27 02:12:59,284 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 21:13:42] 2025-11-27 02:12:59,284 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 21:13:42] 2025-11-27 02:12:59,284 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 21:13:42] 2025-11-27 02:12:59,284 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 21:13:42] 2025-11-27 02:12:59,284 | INFO     | job 6891584316 has completed (purged errors)
[2025-11-26 21:13:42] 2025-11-27 02:12:59,284 | INFO     | overall cleanup function is called
[2025-11-26 21:13:42] 2025-11-27 02:13:00,307 | INFO     | --- collectZombieJob: --- 10, [2761504]
[2025-11-26 21:13:42] 2025-11-27 02:13:00,307 | INFO     | zombie collector waiting for pid 2761504
[2025-11-26 21:13:42] 2025-11-27 02:13:00,307 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 21:13:42] 2025-11-27 02:13:00,307 | INFO     | collected zombie processes
[2025-11-26 21:13:42] 2025-11-27 02:13:00,307 | INFO     | will attempt to kill all subprocesses of pid=2761504
[2025-11-26 21:13:42] 2025-11-27 02:13:01,301 | INFO     | process IDs to be killed: [2761504] (in reverse order)
[2025-11-26 21:13:42] 2025-11-27 02:13:01,557 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 21:13:42] 2025-11-27 02:13:01,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 21:13:42] 2025-11-27 02:13:01,691 | INFO     | did not find any defunct processes belonging to 2761504
[2025-11-26 21:13:42] 2025-11-27 02:13:01,791 | INFO     | did not find any defunct processes belonging to 2761504
[2025-11-26 21:13:42] 2025-11-27 02:13:01,803 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 21:13:42] 2025-11-27 02:13:01,804 | INFO     | ready for new job
[2025-11-26 21:13:42] 2025-11-27 02:13:01,804 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 21:13:42] 2025-11-27 02:13:01,821 | INFO     | ***************************************
[2025-11-26 21:13:42] 2025-11-27 02:13:01,821 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 21:13:42] 2025-11-27 02:13:01,821 | INFO     | ***************************************
[2025-11-26 21:13:42] 2025-11-27 02:13:01,821 | INFO     | 
[2025-11-26 21:13:42] 2025-11-27 02:13:01,837 | INFO     | architecture information:
[2025-11-26 21:13:42] 2025-11-27 02:13:01,853 | INFO     | executing command: cat /etc/os-release
[2025-11-26 21:13:42] 2025-11-27 02:13:01,898 | INFO     | cat /etc/os-release:
[2025-11-26 21:13:42] NAME="CentOS Linux"
[2025-11-26 21:13:42] VERSION="7 (Core)"
[2025-11-26 21:13:42] ID="centos"
[2025-11-26 21:13:42] ID_LIKE="rhel fedora"
[2025-11-26 21:13:42] VERSION_ID="7"
[2025-11-26 21:13:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 21:13:42] ANSI_COLOR="0;31"
[2025-11-26 21:13:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 21:13:42] HOME_URL="https://www.centos.org/"
[2025-11-26 21:13:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 21:13:42] 
[2025-11-26 21:13:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 21:13:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 21:13:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 21:13:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 21:13:42] 
[2025-11-26 21:13:42] 2025-11-27 02:13:01,898 | INFO     | ***************************************
[2025-11-26 21:13:42] 2025-11-27 02:13:02,402 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-26 21:13:42] 2025-11-27 02:13:02,443 | INFO     | sufficient remaining disk space (67656220672 B)
[2025-11-26 21:13:42] 2025-11-27 02:13:02,444 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 21:13:42] 2025-11-27 02:13:02,444 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 21:13:42] 2025-11-27 02:13:02,444 | INFO     | update_server=False
[2025-11-26 21:13:42] 2025-11-27 02:13:02,444 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 21:13:42] 2025-11-27 02:13:02,444 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:13:42] 2025-11-27 02:13:02,444 | INFO     | aborting loop
[2025-11-26 21:13:42] 2025-11-27 02:13:02,479 | INFO     | all payload control threads have been joined
[2025-11-26 21:13:42] 2025-11-27 02:13:02,679 | INFO     | all data control threads have been joined
[2025-11-26 21:13:42] 2025-11-27 02:13:03,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 21:13:42] 2025-11-27 02:13:03,450 | INFO     | [job] retrieve thread has finished
[2025-11-26 21:13:42] 2025-11-27 02:13:03,450 | INFO     | [job] job monitor thread has finished
[2025-11-26 21:13:42] 2025-11-27 02:13:03,471 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 21:13:42] 2025-11-27 02:13:03,471 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 21:13:42] 2025-11-27 02:13:03,480 | INFO     | [payload] failed_post thread has finished
[2025-11-26 21:13:42] 2025-11-27 02:13:03,485 | INFO     | [payload] control thread has finished
[2025-11-26 21:13:42] 2025-11-27 02:13:03,685 | INFO     | [data] control thread has finished
[2025-11-26 21:13:42] 2025-11-27 02:13:03,780 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 21:13:42] 2025-11-27 02:13:03,912 | INFO     | all job control threads have been joined
[2025-11-26 21:13:42] 2025-11-27 02:13:04,006 | INFO     | [job] validate thread has finished
[2025-11-26 21:13:42] 2025-11-27 02:13:04,123 | INFO     | [payload] validate_post thread has finished
[2025-11-26 21:13:42] 2025-11-27 02:13:04,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:13:42] 2025-11-27 02:13:04,420 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 21:13:42] 2025-11-27 02:13:04,495 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 21:13:42] 2025-11-27 02:13:04,498 | INFO     | [data] copytool_in thread has finished
[2025-11-26 21:13:42] 2025-11-27 02:13:04,918 | INFO     | [job] control thread has finished
[2025-11-26 21:13:42] 2025-11-27 02:13:05,242 | INFO     | [job] queue monitor thread has finished
[2025-11-26 21:13:42] 2025-11-27 02:13:05,790 | INFO     | [data] copytool_out thread has finished
[2025-11-26 21:13:42] 2025-11-27 02:13:07,333 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 21:13:42] 2025-11-27 02:13:31,821 | INFO     | PID=2740484 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 21:13:42] 2025-11-27 02:13:31,825 | INFO     | .. there are 85 such processes running
[2025-11-26 21:13:42] 2025-11-27 02:13:31,825 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 21:13:42] 2025-11-27 02:13:31,825 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 21:13:42] 2025-11-27 02:13:31,825 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 21:13:42] 2025-11-27 02:13:36,840 | INFO     | [monitor] cgroup control has ended
[2025-11-26 21:13:42] 2025-11-27 02:13:36,970 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139713263597376)>', '<ExcThread(monitor, started 139712324953856)>']
[2025-11-26 21:13:42] 2025-11-27 02:13:37,863 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 21:13:42] 2025-11-27 02:13:37,881 | INFO     | [monitor] control thread has ended
[2025-11-26 21:13:42] 2025-11-27 02:13:41,997 | INFO     | all workflow threads have been joined
[2025-11-26 21:13:42] 2025-11-27 02:13:42,000 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 21:13:42] 2025-11-27 02:13:42,000 | INFO     | traces error code: 0
[2025-11-26 21:13:42] 2025-11-27 02:13:42,000 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 21:13:42] 2025-11-27 02:13:42,354 [wrapper] ==== pilot stdout END ====
[2025-11-26 21:13:42] 2025-11-27 02:13:42,357 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 21:13:42] 2025-11-27 02:13:42,359 [wrapper] pilotpid: 2740484
[2025-11-26 21:13:42] 2025-11-27 02:13:42,362 [wrapper] Pilot exit status: 0
[2025-11-26 21:13:42] 2025-11-27 02:13:42,382 [wrapper] pandaids: 6891584316
[2025-11-26 21:13:42] 2025-11-27 02:13:42,533 [wrapper] cleanup supervisor_pilot 1493634 2740485
[2025-11-26 21:13:42] 2025-11-27 02:13:42,537 [wrapper] Test setup, not cleaning
[2025-11-26 21:13:42] 2025-11-27 02:13:42,540 [wrapper] apfmon messages muted
[2025-11-26 21:13:42] 2025-11-27 02:13:42,546 [wrapper] ==== wrapper stdout END ====
[2025-11-26 21:13:42] 2025-11-27 02:13:42,549 [wrapper] ==== wrapper stderr END ====
[2025-11-26 21:13:42]  *** Error codes and diagnostics ***
[2025-11-26 21:13:42]     "exeErrorCode": 0,
[2025-11-26 21:13:42]     "exeErrorDiag": "",
[2025-11-26 21:13:42]     "pilotErrorCode": 0,
[2025-11-26 21:13:42]     "pilotErrorDiag": "",
[2025-11-26 21:13:42]  *** Listing of results directory ***
[2025-11-26 21:13:42] total 1308452
[2025-11-26 21:13:42] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 11:45 pilot3.tar.gz
[2025-11-26 21:13:42] -rwx------. 1 boincer umatlas     36292 Nov 18 12:15 runpilot2-wrapper.sh
[2025-11-26 21:13:42] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 12:15 queuedata.json
[2025-11-26 21:13:42] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 21:13:42] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:13 run_atlas
[2025-11-26 21:13:42] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:13 job.xml
[2025-11-26 21:13:42] -rw-r--r--. 2 boincer umatlas 407449453 Nov 26 00:13 EVNT.47493065._000456.pool.root.1
[2025-11-26 21:13:42] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:13 start_atlas.sh
[2025-11-26 21:13:42] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:13 shared
[2025-11-26 21:13:42] -rw-r--r--. 2 boincer umatlas    590097 Nov 26 00:13 input.tar.gz
[2025-11-26 21:13:42] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:13 boinc_lockfile
[2025-11-26 21:13:42] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 00:13 pandaJob.out
[2025-11-26 21:13:42] -rw-------. 1 boincer umatlas    991877 Nov 26 00:14 agis_schedconf.cvmfs.json
[2025-11-26 21:13:42] drwx------. 5 boincer umatlas      4096 Nov 26 00:14 pilot3
[2025-11-26 21:13:42] -rw-r--r--. 1 boincer umatlas       533 Nov 26 20:58 boinc_task_state.xml
[2025-11-26 21:13:42] -rw-r--r--. 1 boincer umatlas      6842 Nov 26 21:09 init_data.xml
[2025-11-26 21:13:42] -rw-------. 1 boincer umatlas 905897778 Nov 26 21:11 HITS.47493068._004559.pool.root.1
[2025-11-26 21:13:42] -rw-------. 1 boincer umatlas      1058 Nov 26 21:12 memory_monitor_summary.json
[2025-11-26 21:13:42] -rw-------. 1 boincer umatlas   1516240 Nov 26 21:12 agis_ddmendpoints.agis.ALL.json
[2025-11-26 21:13:42] -rw-------. 1 boincer umatlas   2274203 Nov 26 21:12 log.47493068._004559.job.log.tgz.1
[2025-11-26 21:13:42] -rw-------. 1 boincer umatlas        95 Nov 26 21:12 pilot_heartbeat.json
[2025-11-26 21:13:42] -rw-------. 1 boincer umatlas      8615 Nov 26 21:12 heartbeat.json
[2025-11-26 21:13:42] -rw-r--r--. 1 boincer umatlas        29 Nov 26 21:13 wrapper_checkpoint.txt
[2025-11-26 21:13:42] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 21:13 boinc_mmap_file
[2025-11-26 21:13:42] -rw-------. 1 boincer umatlas      4824 Nov 26 21:13 pilotlog.txt
[2025-11-26 21:13:42] -rw-------. 1 boincer umatlas   9018508 Nov 26 21:13 log.47493068._004559.job.log.1
[2025-11-26 21:13:42] -rw-------. 1 boincer umatlas       353 Nov 26 21:13 output.list
[2025-11-26 21:13:42] -rw-r--r--. 1 boincer umatlas       620 Nov 26 21:13 runtime_log
[2025-11-26 21:13:42] -rw-------. 1 boincer umatlas  11315200 Nov 26 21:13 result.tar.gz
[2025-11-26 21:13:42] -rw-r--r--. 1 boincer umatlas      8694 Nov 26 21:13 runtime_log.err
[2025-11-26 21:13:42] -rw-------. 1 boincer umatlas       658 Nov 26 21:13 3O4LDm8Tef8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfZFKDm1oDAgn.diag
[2025-11-26 21:13:42] -rw-r--r--. 1 boincer umatlas     21379 Nov 26 21:13 stderr.txt
[2025-11-26 21:13:42] HITS file was successfully produced:
[2025-11-26 21:13:42] -rw-------. 1 boincer umatlas 905897778 Nov 26 21:11 shared/HITS.pool.root.1
[2025-11-26 21:13:42]  *** Contents of shared directory: ***
[2025-11-26 21:13:42] total 1294224
[2025-11-26 21:13:42] -rw-r--r--. 2 boincer umatlas 407449453 Nov 26 00:13 ATLAS.root_0
[2025-11-26 21:13:42] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:13 start_atlas.sh
[2025-11-26 21:13:42] -rw-r--r--. 2 boincer umatlas    590097 Nov 26 00:13 input.tar.gz
[2025-11-26 21:13:42] -rw-------. 1 boincer umatlas 905897778 Nov 26 21:11 HITS.pool.root.1
[2025-11-26 21:13:42] -rw-------. 1 boincer umatlas  11315200 Nov 26 21:13 result.tar.gz
21:13:44 (2731464): run_atlas exited; CPU time 256317.735267
21:13:44 (2731464): called boinc_finish(0)

</stderr_txt>
]]>

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