Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:44:26 (2951246): wrapper (7.7.26015): starting
16:44:26 (2951246): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 16:44:26] Arguments: --nthreads 9
[2025-11-26 16:44:26] Threads: 9
[2025-11-26 16:44:26] Checking for CVMFS
[2025-11-26 16:44:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:44:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:44:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:44:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:44:28] 2.13.3.0 13122 30608 371592 153335 3 560 18905281 32935936 43117 16776704 0 156583604 99.580 169591000 35830 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 16:44:28] CVMFS is ok
[2025-11-26 16:44:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:44:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 16:44:28] Further information can be found at the LHC@home message board.
[2025-11-26 16:44:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:44:28] Checking for apptainer binary...
[2025-11-26 16:44:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:44:28] Running /usr/bin/apptainer --version
[2025-11-26 16:44:29] apptainer version 1.4.4-1.el9
[2025-11-26 16:44:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:44:30] c6-8-25-2.aglt2.org
[2025-11-26 16:44:30] apptainer works
[2025-11-26 16:44:30] Set ATHENA_PROC_NUMBER=9
[2025-11-26 16:44:30] Set ATHENA_CORE_NUMBER=9
[2025-11-26 16:44:30] Starting ATLAS job with PandaID=6891568717
[2025-11-26 16:44:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:21:47]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:21:47] 2025-11-27 08:21:11,620 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:21:47] 2025-11-27 08:21:11,912 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 03:21:47] 2025-11-27 08:21:11,924 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2658.7956666666664
[2025-11-27 03:21:47] 2025-11-27 08:21:11,941 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891568717/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 03:21:47] 2025-11-27 08:21:11,941 | INFO     | extracted standard info from prmon json
[2025-11-27 03:21:47] 2025-11-27 08:21:11,942 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 03:21:47] 2025-11-27 08:21:11,942 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:21:47] 2025-11-27 08:21:11,954 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:21:47] 2025-11-27 08:21:11,955 | INFO     | sum of square deviations: 75332775671.94212
[2025-11-27 03:21:47] 2025-11-27 08:21:11,963 | INFO     | sum of deviations: 819670053559.3944
[2025-11-27 03:21:47] 2025-11-27 08:21:11,963 | INFO     | mean x: 1764212631.2403846
[2025-11-27 03:21:47] 2025-11-27 08:21:11,963 | INFO     | mean y: 2982955.190705128
[2025-11-27 03:21:47] 2025-11-27 08:21:11,963 | INFO     | intersect: -19192808638.050156
[2025-11-27 03:21:47] 2025-11-27 08:21:11,964 | INFO     | chi2: 8.133323977958714
[2025-11-27 03:21:47] 2025-11-27 08:21:11,965 | INFO     | sum of square deviations: 73536496456.67526
[2025-11-27 03:21:47] 2025-11-27 08:21:11,973 | INFO     | sum of deviations: 1043662288533.1863
[2025-11-27 03:21:47] 2025-11-27 08:21:11,973 | INFO     | mean x: 1764212478.7544427
[2025-11-27 03:21:47] 2025-11-27 08:21:11,973 | INFO     | mean y: 3001966.659127625
[2025-11-27 03:21:47] 2025-11-27 08:21:11,973 | INFO     | intersect: -25035477179.820915
[2025-11-27 03:21:47] 2025-11-27 08:21:11,974 | INFO     | chi2: 4.802580548889976
[2025-11-27 03:21:47] 2025-11-27 08:21:11,974 | INFO     | current chi2=4.802580548889976 (change=40.95181057701677 %)
[2025-11-27 03:21:47] 2025-11-27 08:21:11,975 | INFO     | sum of square deviations: 71769008478.65953
[2025-11-27 03:21:47] 2025-11-27 08:21:11,982 | INFO     | sum of deviations: 1144340077519.5786
[2025-11-27 03:21:47] 2025-11-27 08:21:11,983 | INFO     | mean x: 1764212326.2687297
[2025-11-27 03:21:47] 2025-11-27 08:21:11,983 | INFO     | mean y: 3010645.7540716613
[2025-11-27 03:21:47] 2025-11-27 08:21:11,983 | INFO     | intersect: -28126942839.72094
[2025-11-27 03:21:47] 2025-11-27 08:21:11,983 | INFO     | chi2: 3.9592092668271843
[2025-11-27 03:21:47] 2025-11-27 08:21:11,984 | INFO     | current chi2=3.9592092668271843 (change=17.560794108028457 %)
[2025-11-27 03:21:47] 2025-11-27 08:21:11,984 | INFO     | right removable region: 613
[2025-11-27 03:21:47] 2025-11-27 08:21:11,984 | INFO     | sum of square deviations: 73535833996.67537
[2025-11-27 03:21:47] 2025-11-27 08:21:11,992 | INFO     | sum of deviations: 589591017396.5221
[2025-11-27 03:21:47] 2025-11-27 08:21:11,992 | INFO     | mean x: 1764212783.7544427
[2025-11-27 03:21:47] 2025-11-27 08:21:11,992 | INFO     | mean y: 3002471.6284329565
[2025-11-27 03:21:47] 2025-11-27 08:21:11,993 | INFO     | intersect: -14141992608.250027
[2025-11-27 03:21:47] 2025-11-27 08:21:11,993 | INFO     | chi2: 4.872525512988762
[2025-11-27 03:21:47] 2025-11-27 08:21:11,993 | INFO     | current chi2=4.872525512988762 (change=40.09183052103552 %)
[2025-11-27 03:21:47] 2025-11-27 08:21:11,994 | INFO     | sum of square deviations: 71767834114.78348
[2025-11-27 03:21:47] 2025-11-27 08:21:12,002 | INFO     | sum of deviations: 503991155893.864
[2025-11-27 03:21:47] 2025-11-27 08:21:12,002 | INFO     | mean x: 1764212936.262215
[2025-11-27 03:21:47] 2025-11-27 08:21:12,002 | INFO     | mean y: 3009837.5846905536
[2025-11-27 03:21:47] 2025-11-27 08:21:12,002 | INFO     | intersect: -12386213384.16704
[2025-11-27 03:21:47] 2025-11-27 08:21:12,003 | INFO     | chi2: 4.373158553933448
[2025-11-27 03:21:47] 2025-11-27 08:21:12,003 | INFO     | current chi2=4.373158553933448 (change=10.248626871714569 %)
[2025-11-27 03:21:47] 2025-11-27 08:21:12,003 | INFO     | left removable region: 20
[2025-11-27 03:21:47] 2025-11-27 08:21:12,004 | INFO     | sum of square deviations: 64653021717.227585
[2025-11-27 03:21:47] 2025-11-27 08:21:12,011 | INFO     | sum of deviations: 771970983156.2067
[2025-11-27 03:21:47] 2025-11-27 08:21:12,011 | INFO     | mean x: 1764212905.7875211
[2025-11-27 03:21:47] 2025-11-27 08:21:12,011 | INFO     | mean y: 3044805.5413153456
[2025-11-27 03:21:47] 2025-11-27 08:21:12,011 | INFO     | intersect: -21062036689.55546
[2025-11-27 03:21:47] 2025-11-27 08:21:12,012 | INFO     | chi2: 0.07933182203138028
[2025-11-27 03:21:47] 2025-11-27 08:21:12,012 | INFO     | current memory leak: 11.94 B/s (using 593 data points, chi2=0.08)
[2025-11-27 03:21:47] 2025-11-27 08:21:12,013 | INFO     | could have reported an average CPU frequency of 2665 MHz (24 samples)
[2025-11-27 03:21:47] 2025-11-27 08:21:12,013 | INFO     | ..............................
[2025-11-27 03:21:47] 2025-11-27 08:21:12,013 | INFO     | . Timing measurements:
[2025-11-27 03:21:47] 2025-11-27 08:21:12,013 | INFO     | . get job = 0 s
[2025-11-27 03:21:47] 2025-11-27 08:21:12,014 | INFO     | . initial setup = 5 s
[2025-11-27 03:21:47] 2025-11-27 08:21:12,014 | INFO     | . payload setup = 27 s
[2025-11-27 03:21:47] 2025-11-27 08:21:12,014 | INFO     | . stage-in = 1 s
[2025-11-27 03:21:47] 2025-11-27 08:21:12,014 | INFO     | . payload execution = 38041 s
[2025-11-27 03:21:47] 2025-11-27 08:21:12,014 | INFO     | . stage-out = 4 s
[2025-11-27 03:21:47] 2025-11-27 08:21:12,014 | INFO     | . log creation = 0 s
[2025-11-27 03:21:47] 2025-11-27 08:21:12,014 | INFO     | ..............................
[2025-11-27 03:21:47] 2025-11-27 08:21:12,163 | INFO     | time since job start (38149s) is within the limit (172800.0s)
[2025-11-27 03:21:47] 2025-11-27 08:21:12,296 | INFO     | 
[2025-11-27 03:21:47] 2025-11-27 08:21:12,297 | INFO     | job summary report
[2025-11-27 03:21:47] 2025-11-27 08:21:12,297 | INFO     | --------------------------------------------------
[2025-11-27 03:21:47] 2025-11-27 08:21:12,297 | INFO     | PanDA job id: 6891568717
[2025-11-27 03:21:47] 2025-11-27 08:21:12,297 | INFO     | task id: 47493068
[2025-11-27 03:21:47] 2025-11-27 08:21:12,297 | INFO     | errors: (none)
[2025-11-27 03:21:47] 2025-11-27 08:21:12,297 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:21:47] 2025-11-27 08:21:12,297 | INFO     | pilot state: finished 
[2025-11-27 03:21:47] 2025-11-27 08:21:12,297 | INFO     | transexitcode: 0
[2025-11-27 03:21:47] 2025-11-27 08:21:12,297 | INFO     | exeerrorcode: 0
[2025-11-27 03:21:47] 2025-11-27 08:21:12,297 | INFO     | exeerrordiag: 
[2025-11-27 03:21:47] 2025-11-27 08:21:12,297 | INFO     | exitcode: 0
[2025-11-27 03:21:47] 2025-11-27 08:21:12,297 | INFO     | exitmsg: OK
[2025-11-27 03:21:47] 2025-11-27 08:21:12,297 | INFO     | cpuconsumptiontime: 245654 s
[2025-11-27 03:21:47] 2025-11-27 08:21:12,298 | INFO     | nevents: 1000
[2025-11-27 03:21:47] 2025-11-27 08:21:12,298 | INFO     | neventsw: 0
[2025-11-27 03:21:47] 2025-11-27 08:21:12,298 | INFO     | pid: 2979029
[2025-11-27 03:21:47] 2025-11-27 08:21:12,298 | INFO     | pgrp: 2979029
[2025-11-27 03:21:47] 2025-11-27 08:21:12,298 | INFO     | corecount: 9
[2025-11-27 03:21:47] 2025-11-27 08:21:12,298 | INFO     | event service: False
[2025-11-27 03:21:47] 2025-11-27 08:21:12,298 | INFO     | sizes: {0: 2284133, 1: 2284161, 2: 2284360, 13: 2284360, 25: 2284678, 36: 2284706, 38072: 2327626, 38077: 2336676, 38093: 2336866}
[2025-11-27 03:21:47] 2025-11-27 08:21:12,298 | INFO     | --------------------------------------------------
[2025-11-27 03:21:47] 2025-11-27 08:21:12,298 | INFO     | 
[2025-11-27 03:21:47] 2025-11-27 08:21:12,298 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 03:21:47] 2025-11-27 08:21:12,451 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:21:47] 2025-11-27 08:21:12,451 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:21:47] 2025-11-27 08:21:12,451 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:21:47] 2025-11-27 08:21:12,451 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:21:47] 2025-11-27 08:21:12,451 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:21:47] 2025-11-27 08:21:12,451 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:21:47] 2025-11-27 08:21:12,451 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:21:47] 2025-11-27 08:21:12,451 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:21:47] 2025-11-27 08:21:12,451 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:21:47] 2025-11-27 08:21:12,452 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:21:47] 2025-11-27 08:21:12,452 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:21:47] 2025-11-27 08:21:12,452 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:21:47] 2025-11-27 08:21:12,452 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:21:47] 2025-11-27 08:21:12,452 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:21:47] 2025-11-27 08:21:12,452 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:21:47] 2025-11-27 08:21:12,452 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:21:47] 2025-11-27 08:21:12,452 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:21:47] 2025-11-27 08:21:12,452 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:21:47] 2025-11-27 08:21:12,452 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:21:47] 2025-11-27 08:21:12,452 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:21:47] 2025-11-27 08:21:12,452 | INFO     | job 6891568717 has completed (purged errors)
[2025-11-27 03:21:47] 2025-11-27 08:21:12,453 | INFO     | overall cleanup function is called
[2025-11-27 03:21:47] 2025-11-27 08:21:13,480 | INFO     | --- collectZombieJob: --- 10, [2979029]
[2025-11-27 03:21:47] 2025-11-27 08:21:13,481 | INFO     | zombie collector waiting for pid 2979029
[2025-11-27 03:21:47] 2025-11-27 08:21:13,481 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:21:47] 2025-11-27 08:21:13,481 | INFO     | collected zombie processes
[2025-11-27 03:21:47] 2025-11-27 08:21:13,481 | INFO     | will attempt to kill all subprocesses of pid=2979029
[2025-11-27 03:21:47] 2025-11-27 08:21:14,249 | INFO     | process IDs to be killed: [2979029] (in reverse order)
[2025-11-27 03:21:47] 2025-11-27 08:21:14,466 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:21:47] 2025-11-27 08:21:14,467 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:21:47] 2025-11-27 08:21:14,495 | INFO     | did not find any defunct processes belonging to 2979029
[2025-11-27 03:21:47] 2025-11-27 08:21:14,575 | INFO     | did not find any defunct processes belonging to 2979029
[2025-11-27 03:21:47] 2025-11-27 08:21:14,586 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:21:47] 2025-11-27 08:21:14,586 | INFO     | ready for new job
[2025-11-27 03:21:47] 2025-11-27 08:21:14,586 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:21:47] 2025-11-27 08:21:14,592 | INFO     | ***************************************
[2025-11-27 03:21:47] 2025-11-27 08:21:14,593 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:21:47] 2025-11-27 08:21:14,593 | INFO     | ***************************************
[2025-11-27 03:21:47] 2025-11-27 08:21:14,593 | INFO     | 
[2025-11-27 03:21:47] 2025-11-27 08:21:14,598 | INFO     | architecture information:
[2025-11-27 03:21:47] 2025-11-27 08:21:14,598 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:21:47] 2025-11-27 08:21:14,686 | INFO     | cat /etc/os-release:
[2025-11-27 03:21:47] NAME="CentOS Linux"
[2025-11-27 03:21:47] VERSION="7 (Core)"
[2025-11-27 03:21:47] ID="centos"
[2025-11-27 03:21:47] ID_LIKE="rhel fedora"
[2025-11-27 03:21:47] VERSION_ID="7"
[2025-11-27 03:21:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:21:47] ANSI_COLOR="0;31"
[2025-11-27 03:21:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:21:47] HOME_URL="https://www.centos.org/"
[2025-11-27 03:21:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:21:47] 
[2025-11-27 03:21:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:21:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:21:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:21:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:21:47] 
[2025-11-27 03:21:47] 2025-11-27 08:21:14,686 | INFO     | ***************************************
[2025-11-27 03:21:47] 2025-11-27 08:21:15,191 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 03:21:47] 2025-11-27 08:21:15,262 | INFO     | sufficient remaining disk space (66187165696 B)
[2025-11-27 03:21:47] 2025-11-27 08:21:15,262 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:21:47] 2025-11-27 08:21:15,262 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:21:47] 2025-11-27 08:21:15,262 | INFO     | update_server=False
[2025-11-27 03:21:47] 2025-11-27 08:21:15,263 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:21:47] 2025-11-27 08:21:15,264 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:21:47] 2025-11-27 08:21:15,264 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:21:47] 2025-11-27 08:21:15,264 | INFO     | aborting loop
[2025-11-27 03:21:47] 2025-11-27 08:21:15,716 | INFO     | all data control threads have been joined
[2025-11-27 03:21:47] 2025-11-27 08:21:15,782 | INFO     | all job control threads have been joined
[2025-11-27 03:21:47] 2025-11-27 08:21:15,944 | INFO     | all payload control threads have been joined
[2025-11-27 03:21:47] 2025-11-27 08:21:16,066 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:21:47] 2025-11-27 08:21:16,270 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:21:47] 2025-11-27 08:21:16,270 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:21:47] 2025-11-27 08:21:16,360 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:21:47] 2025-11-27 08:21:16,523 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:21:47] 2025-11-27 08:21:16,615 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:21:47] 2025-11-27 08:21:16,722 | INFO     | [data] control thread has finished
[2025-11-27 03:21:47] 2025-11-27 08:21:16,789 | INFO     | [job] control thread has finished
[2025-11-27 03:21:47] 2025-11-27 08:21:16,951 | INFO     | [payload] control thread has finished
[2025-11-27 03:21:47] 2025-11-27 08:21:16,966 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:21:47] 2025-11-27 08:21:17,105 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:21:47] 2025-11-27 08:21:17,224 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:21:47] 2025-11-27 08:21:17,269 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:21:47] 2025-11-27 08:21:17,320 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:21:47] 2025-11-27 08:21:17,348 | INFO     | [job] validate thread has finished
[2025-11-27 03:21:47] 2025-11-27 08:21:18,326 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:21:47] 2025-11-27 08:21:20,076 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:21:47] 2025-11-27 08:21:25,359 | INFO     | job.realtimelogging is not enabled
[2025-11-27 03:21:47] 2025-11-27 08:21:26,366 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:21:47] 2025-11-27 08:21:29,460 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:21:47] 2025-11-27 08:21:31,547 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139631621945152)>', '<ExcThread(monitor, started 139630980617984)>']
[2025-11-27 03:21:47] 2025-11-27 08:21:36,573 | INFO     | all workflow threads have been joined
[2025-11-27 03:21:47] 2025-11-27 08:21:36,574 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:21:47] 2025-11-27 08:21:36,574 | INFO     | traces error code: 0
[2025-11-27 03:21:47] 2025-11-27 08:21:36,574 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:21:47] 2025-11-27 08:21:46,068 | INFO     | PID=2959638 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 03:21:47] 2025-11-27 08:21:46,068 | INFO     | .. there are 63 such processes running
[2025-11-27 03:21:47] 2025-11-27 08:21:46,069 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:21:47] 2025-11-27 08:21:46,069 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:21:47] 2025-11-27 08:21:46,069 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:21:47] 2025-11-27 08:21:46,069 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:21:47] 2025-11-27 08:21:46,069 | INFO     | [monitor] control thread has ended
[2025-11-27 03:21:47] 2025-11-27 08:21:46,560 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:21:47] 2025-11-27 08:21:46,588 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:21:47] 2025-11-27 08:21:46,623 [wrapper] pilotpid: 2959638
[2025-11-27 03:21:47] 2025-11-27 08:21:46,643 [wrapper] Pilot exit status: 0
[2025-11-27 03:21:47] 2025-11-27 08:21:46,695 [wrapper] pandaids: 6891568717
[2025-11-27 03:21:47] 2025-11-27 08:21:46,844 [wrapper] cleanup supervisor_pilot 2287167 2959639
[2025-11-27 03:21:47] 2025-11-27 08:21:46,851 [wrapper] Test setup, not cleaning
[2025-11-27 03:21:47] 2025-11-27 08:21:46,859 [wrapper] apfmon messages muted
[2025-11-27 03:21:47] 2025-11-27 08:21:46,867 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:21:47] 2025-11-27 08:21:46,870 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:21:47]  *** Error codes and diagnostics ***
[2025-11-27 03:21:47]     "exeErrorCode": 0,
[2025-11-27 03:21:47]     "exeErrorDiag": "",
[2025-11-27 03:21:47]     "pilotErrorCode": 0,
[2025-11-27 03:21:47]     "pilotErrorDiag": "",
[2025-11-27 03:21:47]  *** Listing of results directory ***
[2025-11-27 03:21:47] total 1294540
[2025-11-27 03:21:47] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-27 03:21:47] -rwx------. 1 boincer umatlas     36292 Nov 18 10:34 runpilot2-wrapper.sh
[2025-11-27 03:21:47] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:35 queuedata.json
[2025-11-27 03:21:47] -rw-r--r--. 1 boincer umatlas       100 Nov 26 16:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:21:47] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 16:44 run_atlas
[2025-11-27 03:21:47] -rw-r--r--. 1 boincer umatlas       105 Nov 26 16:44 job.xml
[2025-11-27 03:21:47] -rw-r--r--. 2 boincer umatlas 408801424 Nov 26 16:44 EVNT.47493065._000193.pool.root.1
[2025-11-27 03:21:47] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 16:44 start_atlas.sh
[2025-11-27 03:21:47] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 16:44 shared
[2025-11-27 03:21:47] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 16:44 input.tar.gz
[2025-11-27 03:21:47] -rw-r--r--. 1 boincer umatlas         0 Nov 26 16:44 boinc_lockfile
[2025-11-27 03:21:47] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 16:44 pandaJob.out
[2025-11-27 03:21:47] -rw-------. 1 boincer umatlas    991538 Nov 26 16:45 agis_schedconf.cvmfs.json
[2025-11-27 03:21:47] drwx------. 5 boincer umatlas      4096 Nov 26 16:45 pilot3
[2025-11-27 03:21:47] -rw-r--r--. 1 boincer umatlas       533 Nov 27 03:08 boinc_task_state.xml
[2025-11-27 03:21:47] -rw-------. 1 boincer umatlas 899184437 Nov 27 03:20 HITS.47493068._001925.pool.root.1
[2025-11-27 03:21:47] -rw-------. 1 boincer umatlas      1059 Nov 27 03:20 memory_monitor_summary.json
[2025-11-27 03:21:47] -rw-------. 1 boincer umatlas   1516240 Nov 27 03:20 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:21:47] -rw-------. 1 boincer umatlas   1977006 Nov 27 03:20 log.47493068._001925.job.log.tgz.1
[2025-11-27 03:21:47] -rw-r--r--. 1 boincer umatlas      6879 Nov 27 03:21 init_data.xml
[2025-11-27 03:21:47] -rw-------. 1 boincer umatlas      8624 Nov 27 03:21 heartbeat.json
[2025-11-27 03:21:47] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 03:21 boinc_mmap_file
[2025-11-27 03:21:47] -rw-r--r--. 1 boincer umatlas        29 Nov 27 03:21 wrapper_checkpoint.txt
[2025-11-27 03:21:47] -rw-------. 1 boincer umatlas        95 Nov 27 03:21 pilot_heartbeat.json
[2025-11-27 03:21:47] -rw-------. 1 boincer umatlas       823 Nov 27 03:21 pilotlog.txt
[2025-11-27 03:21:47] -rw-------. 1 boincer umatlas   4877701 Nov 27 03:21 log.47493068._001925.job.log.1
[2025-11-27 03:21:47] -rw-------. 1 boincer umatlas       353 Nov 27 03:21 output.list
[2025-11-27 03:21:47] -rw-r--r--. 1 boincer umatlas       620 Nov 27 03:21 runtime_log
[2025-11-27 03:21:47] -rw-------. 1 boincer umatlas   6871040 Nov 27 03:21 result.tar.gz
[2025-11-27 03:21:47] -rw-------. 1 boincer umatlas       661 Nov 27 03:21 KPfMDmVucf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkXFKDm52A8Im.diag
[2025-11-27 03:21:47] -rw-r--r--. 1 boincer umatlas      8709 Nov 27 03:21 runtime_log.err
[2025-11-27 03:21:47] -rw-r--r--. 1 boincer umatlas     21329 Nov 27 03:21 stderr.txt
[2025-11-27 03:21:47] HITS file was successfully produced:
[2025-11-27 03:21:47] -rw-------. 1 boincer umatlas 899184437 Nov 27 03:20 shared/HITS.pool.root.1
[2025-11-27 03:21:47]  *** Contents of shared directory: ***
[2025-11-27 03:21:47] total 1284652
[2025-11-27 03:21:47] -rw-r--r--. 2 boincer umatlas 408801424 Nov 26 16:44 ATLAS.root_0
[2025-11-27 03:21:47] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 16:44 start_atlas.sh
[2025-11-27 03:21:47] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 16:44 input.tar.gz
[2025-11-27 03:21:47] -rw-------. 1 boincer umatlas 899184437 Nov 27 03:20 HITS.pool.root.1
[2025-11-27 03:21:47] -rw-------. 1 boincer umatlas   6871040 Nov 27 03:21 result.tar.gz
03:21:48 (2951246): run_atlas exited; CPU time 247271.974917
03:21:48 (2951246): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN