Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:02:49 (1719282): wrapper (7.7.26015): starting
21:02:49 (1719282): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 21:02:49] Arguments: --nthreads 8
[2025-11-26 21:02:49] Threads: 8
[2025-11-26 21:02:49] Checking for CVMFS
[2025-11-26 21:02:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 21:02:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 21:02:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 21:02:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 21:02:52] 2.13.2.0 7646 33725 182532 153342 3 559 27540650 39288833 8663 16776704 0 26354874 99.595 28628899 39344 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 21:02:52] CVMFS is ok
[2025-11-26 21:02:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 21:02:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 21:02:52] Further information can be found at the LHC@home message board.
[2025-11-26 21:02:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 21:02:52] Checking for apptainer binary...
[2025-11-26 21:02:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 21:02:52] Running /usr/bin/apptainer --version
[2025-11-26 21:02:52] apptainer version 1.4.4-1.el9
[2025-11-26 21:02:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 21:02:53] c-210-2.aglt2.org
[2025-11-26 21:02:53] apptainer works
[2025-11-26 21:02:53] Set ATHENA_PROC_NUMBER=8
[2025-11-26 21:02:53] Set ATHENA_CORE_NUMBER=8
[2025-11-26 21:02:53] Starting ATLAS job with PandaID=6896764118
[2025-11-26 21:02:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 11:13:36]  *** The last 200 lines of the pilot log: ***
[2025-11-27 11:13:36] 2025-11-27 16:12:56,859 | INFO     | time since job start (50934s) is within the limit (172800.0s)
[2025-11-27 11:13:36] 2025-11-27 16:12:58,408 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 11:13:36] 2025-11-27 16:12:58,415 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.759625
[2025-11-27 11:13:36] 2025-11-27 16:12:58,422 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6896764118/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 11:13:36] 2025-11-27 16:12:58,423 | INFO     | extracted standard info from prmon json
[2025-11-27 11:13:36] 2025-11-27 16:12:58,423 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 11:13:36] 2025-11-27 16:12:58,423 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 11:13:36] 2025-11-27 16:12:58,438 | INFO     | fitting pss+swap vs Time
[2025-11-27 11:13:36] 2025-11-27 16:12:58,440 | INFO     | sum of square deviations: 179216266231.13828
[2025-11-27 11:13:36] 2025-11-27 16:12:58,457 | INFO     | sum of deviations: 2104397753370.5164
[2025-11-27 11:13:36] 2025-11-27 16:12:58,458 | INFO     | mean x: 1764234548.8343337
[2025-11-27 11:13:36] 2025-11-27 16:12:58,458 | INFO     | mean y: 2907968.5834333734
[2025-11-27 11:13:36] 2025-11-27 16:12:58,458 | INFO     | intersect: -20713131367.920475
[2025-11-27 11:13:36] 2025-11-27 16:12:58,459 | INFO     | chi2: 7.8056658264550425
[2025-11-27 11:13:36] 2025-11-27 16:12:58,460 | INFO     | sum of square deviations: 176008616289.21277
[2025-11-27 11:13:36] 2025-11-27 16:12:58,471 | INFO     | monitor loop #3499: job 0:6896764118 is in state 'finished'
[2025-11-27 11:13:36] 2025-11-27 16:12:58,472 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 11:13:36] 2025-11-27 16:12:58,478 | INFO     | sum of deviations: 2396511855335.997
[2025-11-27 11:13:36] 2025-11-27 16:12:58,478 | INFO     | mean x: 1764234396.3454106
[2025-11-27 11:13:36] 2025-11-27 16:12:58,479 | INFO     | mean y: 2921855.8671497586
[2025-11-27 11:13:36] 2025-11-27 16:12:58,479 | INFO     | intersect: -24018678538.320194
[2025-11-27 11:13:36] 2025-11-27 16:12:58,480 | INFO     | chi2: 4.4051300365526425
[2025-11-27 11:13:36] 2025-11-27 16:12:58,480 | INFO     | current chi2=4.4051300365526425 (change=43.564967621048666 %)
[2025-11-27 11:13:36] 2025-11-27 16:12:58,481 | INFO     | sum of square deviations: 172839478697.0811
[2025-11-27 11:13:36] 2025-11-27 16:12:58,498 | INFO     | sum of deviations: 2459819661774.642
[2025-11-27 11:13:36] 2025-11-27 16:12:58,498 | INFO     | mean x: 1764234243.8566222
[2025-11-27 11:13:36] 2025-11-27 16:12:58,498 | INFO     | mean y: 2924896.82746051
[2025-11-27 11:13:36] 2025-11-27 16:12:58,498 | INFO     | intersect: -25105332277.567307
[2025-11-27 11:13:36] 2025-11-27 16:12:58,499 | INFO     | chi2: 4.03667843660368
[2025-11-27 11:13:36] 2025-11-27 16:12:58,500 | INFO     | current chi2=4.03667843660368 (change=8.36414809305618 %)
[2025-11-27 11:13:36] 2025-11-27 16:12:58,500 | INFO     | right removable region: 822
[2025-11-27 11:13:36] 2025-11-27 16:12:58,501 | INFO     | sum of square deviations: 176007684209.21274
[2025-11-27 11:13:36] 2025-11-27 16:12:58,518 | INFO     | sum of deviations: 1815421305250.5703
[2025-11-27 11:13:36] 2025-11-27 16:12:58,518 | INFO     | mean x: 1764234701.3454106
[2025-11-27 11:13:36] 2025-11-27 16:12:58,518 | INFO     | mean y: 2921696.742753623
[2025-11-27 11:13:36] 2025-11-27 16:12:58,518 | INFO     | intersect: -18194177359.897133
[2025-11-27 11:13:36] 2025-11-27 16:12:58,520 | INFO     | chi2: 4.827476484368006
[2025-11-27 11:13:36] 2025-11-27 16:12:58,520 | INFO     | current chi2=4.827476484368006 (change=38.15419988892334 %)
[2025-11-27 11:13:36] 2025-11-27 16:12:58,521 | INFO     | sum of square deviations: 172837866460.6171
[2025-11-27 11:13:36] 2025-11-27 16:12:58,538 | INFO     | sum of deviations: 1676780129912.3257
[2025-11-27 11:13:36] 2025-11-27 16:12:58,538 | INFO     | mean x: 1764234853.8505468
[2025-11-27 11:13:36] 2025-11-27 16:12:58,538 | INFO     | mean y: 2928357.6123936814
[2025-11-27 11:13:36] 2025-11-27 16:12:58,538 | INFO     | intersect: -17112730427.202778
[2025-11-27 11:13:36] 2025-11-27 16:12:58,540 | INFO     | chi2: 4.191494888292056
[2025-11-27 11:13:36] 2025-11-27 16:12:58,540 | INFO     | current chi2=4.191494888292056 (change=13.174203916587485 %)
[2025-11-27 11:13:36] 2025-11-27 16:12:58,540 | INFO     | left removable region: 20
[2025-11-27 11:13:36] 2025-11-27 16:12:58,541 | INFO     | sum of square deviations: 159942068096.4902
[2025-11-27 11:13:36] 2025-11-27 16:12:58,557 | INFO     | sum of deviations: 1889553504230.096
[2025-11-27 11:13:36] 2025-11-27 16:12:58,557 | INFO     | mean x: 1764234823.3678305
[2025-11-27 11:13:36] 2025-11-27 16:12:58,557 | INFO     | mean y: 2952321.6471321695
[2025-11-27 11:13:36] 2025-11-27 16:12:58,557 | INFO     | intersect: -20839694847.12861
[2025-11-27 11:13:36] 2025-11-27 16:12:58,558 | INFO     | chi2: 0.2964940858950914
[2025-11-27 11:13:36] 2025-11-27 16:12:58,559 | INFO     | current memory leak: 11.81 B/s (using 802 data points, chi2=0.30)
[2025-11-27 11:13:36] 2025-11-27 16:12:58,560 | INFO     | could have reported an average CPU frequency of 2599 MHz (31 samples)
[2025-11-27 11:13:36] 2025-11-27 16:12:58,560 | INFO     | ..............................
[2025-11-27 11:13:36] 2025-11-27 16:12:58,560 | INFO     | . Timing measurements:
[2025-11-27 11:13:36] 2025-11-27 16:12:58,560 | INFO     | . get job = 0 s
[2025-11-27 11:13:36] 2025-11-27 16:12:58,560 | INFO     | . initial setup = 5 s
[2025-11-27 11:13:36] 2025-11-27 16:12:58,560 | INFO     | . payload setup = 40 s
[2025-11-27 11:13:36] 2025-11-27 16:12:58,560 | INFO     | . stage-in = 0 s
[2025-11-27 11:13:36] 2025-11-27 16:12:58,560 | INFO     | . payload execution = 50808 s
[2025-11-27 11:13:36] 2025-11-27 16:12:58,560 | INFO     | . stage-out = 5 s
[2025-11-27 11:13:36] 2025-11-27 16:12:58,561 | INFO     | . log creation = 0 s
[2025-11-27 11:13:36] 2025-11-27 16:12:58,561 | INFO     | ..............................
[2025-11-27 11:13:36] 2025-11-27 16:12:58,666 | INFO     | 
[2025-11-27 11:13:36] 2025-11-27 16:12:58,666 | INFO     | job summary report
[2025-11-27 11:13:36] 2025-11-27 16:12:58,666 | INFO     | --------------------------------------------------
[2025-11-27 11:13:36] 2025-11-27 16:12:58,666 | INFO     | PanDA job id: 6896764118
[2025-11-27 11:13:36] 2025-11-27 16:12:58,666 | INFO     | task id: 47556185
[2025-11-27 11:13:36] 2025-11-27 16:12:58,666 | INFO     | errors: (none)
[2025-11-27 11:13:36] 2025-11-27 16:12:58,666 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 11:13:36] 2025-11-27 16:12:58,667 | INFO     | pilot state: finished 
[2025-11-27 11:13:36] 2025-11-27 16:12:58,667 | INFO     | transexitcode: 0
[2025-11-27 11:13:36] 2025-11-27 16:12:58,667 | INFO     | exeerrorcode: 0
[2025-11-27 11:13:36] 2025-11-27 16:12:58,667 | INFO     | exeerrordiag: 
[2025-11-27 11:13:36] 2025-11-27 16:12:58,667 | INFO     | exitcode: 0
[2025-11-27 11:13:36] 2025-11-27 16:12:58,667 | INFO     | exitmsg: OK
[2025-11-27 11:13:36] 2025-11-27 16:12:58,667 | INFO     | cpuconsumptiontime: 287235 s
[2025-11-27 11:13:36] 2025-11-27 16:12:58,667 | INFO     | nevents: 1000
[2025-11-27 11:13:36] 2025-11-27 16:12:58,667 | INFO     | neventsw: 0
[2025-11-27 11:13:36] 2025-11-27 16:12:58,667 | INFO     | pid: 1733750
[2025-11-27 11:13:36] 2025-11-27 16:12:58,667 | INFO     | pgrp: 1733750
[2025-11-27 11:13:36] 2025-11-27 16:12:58,668 | INFO     | corecount: 8
[2025-11-27 11:13:36] 2025-11-27 16:12:58,668 | INFO     | event service: False
[2025-11-27 11:13:36] 2025-11-27 16:12:58,668 | INFO     | sizes: {0: 2284083, 1: 2284167, 2: 2284366, 13: 2284366, 24: 2284422, 29: 2284712, 35: 2284868, 50852: 2333484, 50853: 2333483, 50859: 2342533, 50861: 2342589, 508
[2025-11-27 11:13:36] 2025-11-27 16:12:58,668 | INFO     | --------------------------------------------------
[2025-11-27 11:13:36] 2025-11-27 16:12:58,668 | INFO     | 
[2025-11-27 11:13:36] 2025-11-27 16:12:58,668 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 11:13:36] 2025-11-27 16:12:58,686 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 11:13:36] 2025-11-27 16:12:58,687 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 11:13:36] 2025-11-27 16:12:58,687 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 11:13:36] 2025-11-27 16:12:58,687 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 11:13:36] 2025-11-27 16:12:58,687 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 11:13:36] 2025-11-27 16:12:58,687 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 11:13:36] 2025-11-27 16:12:58,687 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 11:13:36] 2025-11-27 16:12:58,687 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 11:13:36] 2025-11-27 16:12:58,687 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 11:13:36] 2025-11-27 16:12:58,687 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 11:13:36] 2025-11-27 16:12:58,688 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 11:13:36] 2025-11-27 16:12:58,688 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 11:13:36] 2025-11-27 16:12:58,688 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 11:13:36] 2025-11-27 16:12:58,688 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 11:13:36] 2025-11-27 16:12:58,688 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 11:13:36] 2025-11-27 16:12:58,688 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 11:13:36] 2025-11-27 16:12:58,688 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 11:13:36] 2025-11-27 16:12:58,688 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 11:13:36] 2025-11-27 16:12:58,688 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 11:13:36] 2025-11-27 16:12:58,688 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 11:13:36] 2025-11-27 16:12:58,689 | INFO     | job 6896764118 has completed (purged errors)
[2025-11-27 11:13:36] 2025-11-27 16:12:58,689 | INFO     | overall cleanup function is called
[2025-11-27 11:13:36] 2025-11-27 16:12:59,705 | INFO     | --- collectZombieJob: --- 10, [1733750]
[2025-11-27 11:13:36] 2025-11-27 16:12:59,705 | INFO     | zombie collector waiting for pid 1733750
[2025-11-27 11:13:36] 2025-11-27 16:12:59,706 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 11:13:36] 2025-11-27 16:12:59,706 | INFO     | collected zombie processes
[2025-11-27 11:13:36] 2025-11-27 16:12:59,706 | INFO     | will attempt to kill all subprocesses of pid=1733750
[2025-11-27 11:13:36] 2025-11-27 16:13:00,713 | INFO     | process IDs to be killed: [1733750] (in reverse order)
[2025-11-27 11:13:36] 2025-11-27 16:13:00,818 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 11:13:36] 2025-11-27 16:13:00,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 11:13:36] 2025-11-27 16:13:00,826 | INFO     | did not find any defunct processes belonging to 1733750
[2025-11-27 11:13:36] 2025-11-27 16:13:00,834 | INFO     | did not find any defunct processes belonging to 1733750
[2025-11-27 11:13:36] 2025-11-27 16:13:00,835 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 11:13:36] 2025-11-27 16:13:00,835 | INFO     | ready for new job
[2025-11-27 11:13:36] 2025-11-27 16:13:00,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 11:13:36] 2025-11-27 16:13:00,840 | INFO     | ***************************************
[2025-11-27 11:13:36] 2025-11-27 16:13:00,840 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 11:13:36] 2025-11-27 16:13:00,840 | INFO     | ***************************************
[2025-11-27 11:13:36] 2025-11-27 16:13:00,840 | INFO     | 
[2025-11-27 11:13:36] 2025-11-27 16:13:00,842 | INFO     | architecture information:
[2025-11-27 11:13:36] 2025-11-27 16:13:00,842 | INFO     | executing command: cat /etc/os-release
[2025-11-27 11:13:36] 2025-11-27 16:13:00,858 | INFO     | cat /etc/os-release:
[2025-11-27 11:13:36] NAME="CentOS Linux"
[2025-11-27 11:13:36] VERSION="7 (Core)"
[2025-11-27 11:13:36] ID="centos"
[2025-11-27 11:13:36] ID_LIKE="rhel fedora"
[2025-11-27 11:13:36] VERSION_ID="7"
[2025-11-27 11:13:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 11:13:36] ANSI_COLOR="0;31"
[2025-11-27 11:13:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 11:13:36] HOME_URL="https://www.centos.org/"
[2025-11-27 11:13:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 11:13:36] 
[2025-11-27 11:13:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 11:13:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 11:13:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 11:13:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 11:13:36] 
[2025-11-27 11:13:36] 2025-11-27 16:13:00,858 | INFO     | ***************************************
[2025-11-27 11:13:36] 2025-11-27 16:13:01,362 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 11:13:36] 2025-11-27 16:13:01,424 | INFO     | sufficient remaining disk space (49860837376 B)
[2025-11-27 11:13:36] 2025-11-27 16:13:01,424 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 11:13:36] 2025-11-27 16:13:01,424 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 11:13:36] 2025-11-27 16:13:01,424 | INFO     | update_server=False
[2025-11-27 11:13:36] 2025-11-27 16:13:01,425 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 11:13:36] 2025-11-27 16:13:01,425 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 11:13:36] 2025-11-27 16:13:01,427 | INFO     | all job control threads have been joined
[2025-11-27 11:13:36] 2025-11-27 16:13:01,569 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 11:13:36] 2025-11-27 16:13:01,997 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:13:36] 2025-11-27 16:13:01,997 | INFO     | aborting loop
[2025-11-27 11:13:36] 2025-11-27 16:13:02,016 | INFO     | all data control threads have been joined
[2025-11-27 11:13:36] 2025-11-27 16:13:02,430 | INFO     | [job] retrieve thread has finished
[2025-11-27 11:13:36] 2025-11-27 16:13:02,433 | INFO     | [job] control thread has finished
[2025-11-27 11:13:36] 2025-11-27 16:13:02,562 | INFO     | [data] copytool_in thread has finished
[2025-11-27 11:13:36] 2025-11-27 16:13:02,635 | INFO     | all payload control threads have been joined
[2025-11-27 11:13:36] 2025-11-27 16:13:03,003 | INFO     | [job] job monitor thread has finished
[2025-11-27 11:13:36] 2025-11-27 16:13:03,022 | INFO     | [data] control thread has finished
[2025-11-27 11:13:36] 2025-11-27 16:13:03,359 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 11:13:36] 2025-11-27 16:13:03,416 | INFO     | [job] validate thread has finished
[2025-11-27 11:13:36] 2025-11-27 16:13:03,462 | INFO     | [payload] failed_post thread has finished
[2025-11-27 11:13:36] 2025-11-27 16:13:03,527 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 11:13:36] 2025-11-27 16:13:03,577 | INFO     | [data] copytool_out thread has finished
[2025-11-27 11:13:36] 2025-11-27 16:13:03,640 | INFO     | [payload] control thread has finished
[2025-11-27 11:13:36] 2025-11-27 16:13:03,649 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 11:13:36] 2025-11-27 16:13:03,667 | INFO     | [payload] validate_post thread has finished
[2025-11-27 11:13:36] 2025-11-27 16:13:03,681 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:13:36] 2025-11-27 16:13:03,861 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 11:13:36] 2025-11-27 16:13:04,687 | INFO     | [job] queue monitor thread has finished
[2025-11-27 11:13:36] 2025-11-27 16:13:05,433 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 11:13:36] 2025-11-27 16:13:30,273 | INFO     | PID=1723329 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 11:13:36] 2025-11-27 16:13:30,274 | INFO     | .. there are 8 such processes running
[2025-11-27 11:13:36] 2025-11-27 16:13:30,275 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 11:13:36] 2025-11-27 16:13:30,275 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 11:13:36] 2025-11-27 16:13:30,275 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 11:13:36] 2025-11-27 16:13:30,655 | INFO     | [monitor] cgroup control has ended
[2025-11-27 11:13:36] 2025-11-27 16:13:30,754 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140677538789184)>', '<ExcThread(monitor, started 140676746438400)>']
[2025-11-27 11:13:36] 2025-11-27 16:13:31,280 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 11:13:36] 2025-11-27 16:13:31,280 | INFO     | [monitor] control thread has ended
[2025-11-27 11:13:36] 2025-11-27 16:13:35,780 | INFO     | all workflow threads have been joined
[2025-11-27 11:13:36] 2025-11-27 16:13:35,781 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 11:13:36] 2025-11-27 16:13:35,781 | INFO     | traces error code: 0
[2025-11-27 11:13:36] 2025-11-27 16:13:35,781 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 11:13:36] 2025-11-27 16:13:36,087 [wrapper] ==== pilot stdout END ====
[2025-11-27 11:13:36] 2025-11-27 16:13:36,091 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 11:13:36] 2025-11-27 16:13:36,093 [wrapper] pilotpid: 1723329
[2025-11-27 11:13:36] 2025-11-27 16:13:36,096 [wrapper] Pilot exit status: 0
[2025-11-27 11:13:36] 2025-11-27 16:13:36,137 [wrapper] pandaids: 6896764118
[2025-11-27 11:13:36] 2025-11-27 16:13:36,599 [wrapper] cleanup supervisor_pilot 2916992 1723330
[2025-11-27 11:13:36] 2025-11-27 16:13:36,647 [wrapper] Test setup, not cleaning
[2025-11-27 11:13:36] 2025-11-27 16:13:36,686 [wrapper] apfmon messages muted
[2025-11-27 11:13:36] 2025-11-27 16:13:36,689 [wrapper] ==== wrapper stdout END ====
[2025-11-27 11:13:36] 2025-11-27 16:13:36,691 [wrapper] ==== wrapper stderr END ====
[2025-11-27 11:13:36]  *** Error codes and diagnostics ***
[2025-11-27 11:13:36]     "exeErrorCode": 0,
[2025-11-27 11:13:36]     "exeErrorDiag": "",
[2025-11-27 11:13:36]     "pilotErrorCode": 0,
[2025-11-27 11:13:36]     "pilotErrorDiag": "",
[2025-11-27 11:13:36]  *** Listing of results directory ***
[2025-11-27 11:13:36] total 1307392
[2025-11-27 11:13:36] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 03:00 pilot3.tar.gz
[2025-11-27 11:13:36] -rwx------. 1 boincer umatlas     36292 Nov 25 03:15 runpilot2-wrapper.sh
[2025-11-27 11:13:36] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 03:15 queuedata.json
[2025-11-27 11:13:36] -rw-r--r--. 1 boincer umatlas       100 Nov 26 21:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 11:13:36] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 21:02 run_atlas
[2025-11-27 11:13:36] -rw-r--r--. 1 boincer umatlas       105 Nov 26 21:02 job.xml
[2025-11-27 11:13:36] -rw-r--r--. 2 boincer umatlas 409968395 Nov 26 21:02 EVNT.47483658._004246.pool.root.1
[2025-11-27 11:13:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 21:02 start_atlas.sh
[2025-11-27 11:13:36] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 21:02 shared
[2025-11-27 11:13:36] -rw-r--r--. 2 boincer umatlas    590097 Nov 26 21:02 input.tar.gz
[2025-11-27 11:13:36] -rw-r--r--. 1 boincer umatlas         0 Nov 26 21:02 boinc_lockfile
[2025-11-27 11:13:36] -rw-r--r--. 1 boincer umatlas      2783 Nov 26 21:02 pandaJob.out
[2025-11-27 11:13:36] -rw-------. 1 boincer umatlas        57 Nov 26 21:02 setup.sh.local
[2025-11-27 11:13:36] -rw-------. 1 boincer umatlas    991530 Nov 26 21:03 agis_schedconf.cvmfs.json
[2025-11-27 11:13:36] drwx------. 5 boincer umatlas      4096 Nov 26 21:04 pilot3
[2025-11-27 11:13:36] -rw-r--r--. 1 boincer umatlas       533 Nov 27 11:02 boinc_task_state.xml
[2025-11-27 11:13:36] -rw-------. 1 boincer umatlas 906877439 Nov 27 11:11 HITS.47556185._000092.pool.root.1
[2025-11-27 11:13:36] -rw-------. 1 boincer umatlas      1056 Nov 27 11:12 memory_monitor_summary.json
[2025-11-27 11:13:36] -rw-------. 1 boincer umatlas   1516240 Nov 27 11:12 agis_ddmendpoints.agis.ALL.json
[2025-11-27 11:13:36] -rw-------. 1 boincer umatlas   2055539 Nov 27 11:12 log.47556185._000092.job.log.tgz.1
[2025-11-27 11:13:36] -rw-r--r--. 1 boincer umatlas      6657 Nov 27 11:12 init_data.xml
[2025-11-27 11:13:36] -rw-------. 1 boincer umatlas      8619 Nov 27 11:12 heartbeat.json
[2025-11-27 11:13:36] -rw-------. 1 boincer umatlas        95 Nov 27 11:13 pilot_heartbeat.json
[2025-11-27 11:13:36] -rw-r--r--. 1 boincer umatlas        29 Nov 27 11:13 wrapper_checkpoint.txt
[2025-11-27 11:13:36] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 11:13 boinc_mmap_file
[2025-11-27 11:13:36] -rw-------. 1 boincer umatlas      4823 Nov 27 11:13 pilotlog.txt
[2025-11-27 11:13:36] -rw-------. 1 boincer umatlas   6945954 Nov 27 11:13 log.47556185._000092.job.log.1
[2025-11-27 11:13:36] -rw-------. 1 boincer umatlas       353 Nov 27 11:13 output.list
[2025-11-27 11:13:36] -rw-r--r--. 1 boincer umatlas       620 Nov 27 11:13 runtime_log
[2025-11-27 11:13:36] -rw-------. 1 boincer umatlas   9021440 Nov 27 11:13 result.tar.gz
[2025-11-27 11:13:36] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 11:13 runtime_log.err
[2025-11-27 11:13:36] -rw-------. 1 boincer umatlas       659 Nov 27 11:13 EEFMDmIO3h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmROJKDmVVwQLm.diag
[2025-11-27 11:13:36] -rw-r--r--. 1 boincer umatlas     21376 Nov 27 11:13 stderr.txt
[2025-11-27 11:13:36] HITS file was successfully produced:
[2025-11-27 11:13:36] -rw-------. 1 boincer umatlas 906877439 Nov 27 11:11 shared/HITS.pool.root.1
[2025-11-27 11:13:36]  *** Contents of shared directory: ***
[2025-11-27 11:13:36] total 1295400
[2025-11-27 11:13:36] -rw-r--r--. 2 boincer umatlas 409968395 Nov 26 21:02 ATLAS.root_0
[2025-11-27 11:13:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 21:02 start_atlas.sh
[2025-11-27 11:13:36] -rw-r--r--. 2 boincer umatlas    590097 Nov 26 21:02 input.tar.gz
[2025-11-27 11:13:36] -rw-------. 1 boincer umatlas 906877439 Nov 27 11:11 HITS.pool.root.1
[2025-11-27 11:13:36] -rw-------. 1 boincer umatlas   9021440 Nov 27 11:13 result.tar.gz
11:13:38 (1719282): run_atlas exited; CPU time 288044.558164
11:13:38 (1719282): called boinc_finish(0)

</stderr_txt>
]]>

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