Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:51 (2902063): wrapper (7.7.26015): starting
00:11:51 (2902063): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:11:51] Arguments: --nthreads 8
[2025-11-26 00:11:51] Threads: 8
[2025-11-26 00:11:51] Checking for CVMFS
[2025-11-26 00:11:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:11:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:11:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:11:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:11:52] 2.13.3.0 11379 29614 327164 153310 3 59 31192007 32935936 30281 16776704 0 106022971 99.425 151903055 39321 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:11:52] CVMFS is ok
[2025-11-26 00:11:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:11:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:11:53] Further information can be found at the LHC@home message board.
[2025-11-26 00:11:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:11:53] Checking for apptainer binary...
[2025-11-26 00:11:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:11:53] Running /usr/bin/apptainer --version
[2025-11-26 00:11:53] apptainer version 1.4.4-1.el9
[2025-11-26 00:11:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:11:53] c6-4-5-1.aglt2.org
[2025-11-26 00:11:53] apptainer works
[2025-11-26 00:11:53] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:11:53] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:11:53] Starting ATLAS job with PandaID=6896713865
[2025-11-26 00:11:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 15:56:14]  *** The last 200 lines of the pilot log: ***
[2025-11-26 15:56:14] 2025-11-26 20:55:16,123 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 15:56:14] 2025-11-26 20:55:16,123 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 15:56:14] 2025-11-26 20:55:16,140 | INFO     | fitting pss+swap vs Time
[2025-11-26 15:56:14] 2025-11-26 20:55:16,142 | INFO     | sum of square deviations: 246207440422.9257
[2025-11-26 15:56:14] 2025-11-26 20:55:16,158 | INFO     | sum of deviations: 1266911777055.3833
[2025-11-26 15:56:14] 2025-11-26 20:55:16,158 | INFO     | mean x: 1764162235.0809934
[2025-11-26 15:56:14] 2025-11-26 20:55:16,158 | INFO     | mean y: 2893832.0615550755
[2025-11-26 15:56:14] 2025-11-26 20:55:16,158 | INFO     | intersect: -9074971192.737028
[2025-11-26 15:56:14] 2025-11-26 20:55:16,160 | INFO     | chi2: 8.284135441917313
[2025-11-26 15:56:14] 2025-11-26 20:55:16,161 | INFO     | sum of square deviations: 242240767343.72876
[2025-11-26 15:56:14] 2025-11-26 20:55:16,178 | INFO     | sum of deviations: 1569814114065.8887
[2025-11-26 15:56:14] 2025-11-26 20:55:16,179 | INFO     | mean x: 1764162082.5841477
[2025-11-26 15:56:14] 2025-11-26 20:55:16,179 | INFO     | mean y: 2905479.8143322477
[2025-11-26 15:56:14] 2025-11-26 20:55:16,179 | INFO     | intersect: -11429548962.54963
[2025-11-26 15:56:14] 2025-11-26 20:55:16,180 | INFO     | chi2: 5.325454777644963
[2025-11-26 15:56:14] 2025-11-26 20:55:16,181 | INFO     | current chi2=5.325454777644963 (change=35.715020414822924 %)
[2025-11-26 15:56:14] 2025-11-26 20:55:16,182 | INFO     | sum of square deviations: 238316932277.01288
[2025-11-26 15:56:14] 2025-11-26 20:55:16,197 | INFO     | sum of deviations: 1770519487730.8962
[2025-11-26 15:56:14] 2025-11-26 20:55:16,197 | INFO     | mean x: 1764161930.0873363
[2025-11-26 15:56:14] 2025-11-26 20:55:16,198 | INFO     | mean y: 2913273.551310044
[2025-11-26 15:56:14] 2025-11-26 20:55:16,198 | INFO     | intersect: -13103512052.12354
[2025-11-26 15:56:14] 2025-11-26 20:55:16,199 | INFO     | chi2: 3.783299310111238
[2025-11-26 15:56:14] 2025-11-26 20:55:16,199 | INFO     | current chi2=3.783299310111238 (change=28.958192904150458 %)
[2025-11-26 15:56:14] 2025-11-26 20:55:16,200 | INFO     | sum of square deviations: 234435702660.27893
[2025-11-26 15:56:14] 2025-11-26 20:55:16,216 | INFO     | sum of deviations: 1871085461178.8594
[2025-11-26 15:56:14] 2025-11-26 20:55:16,216 | INFO     | mean x: 1764161777.5905597
[2025-11-26 15:56:14] 2025-11-26 20:55:16,216 | INFO     | mean y: 2917218.704720088
[2025-11-26 15:56:14] 2025-11-26 20:55:16,216 | INFO     | intersect: -14077265175.699955
[2025-11-26 15:56:14] 2025-11-26 20:55:16,217 | INFO     | chi2: 3.261466575498594
[2025-11-26 15:56:14] 2025-11-26 20:55:16,217 | INFO     | current chi2=3.261466575498594 (change=13.793059756546219 %)
[2025-11-26 15:56:14] 2025-11-26 20:55:16,217 | INFO     | right removable region: 910
[2025-11-26 15:56:14] 2025-11-26 20:55:16,218 | INFO     | sum of square deviations: 242240439163.7285
[2025-11-26 15:56:14] 2025-11-26 20:55:16,234 | INFO     | sum of deviations: 961784359476.0311
[2025-11-26 15:56:14] 2025-11-26 20:55:16,234 | INFO     | mean x: 1764162387.5841477
[2025-11-26 15:56:14] 2025-11-26 20:55:16,235 | INFO     | mean y: 2905554.0705754613
[2025-11-26 15:56:14] 2025-11-26 20:55:16,235 | INFO     | intersect: -7001473226.829458
[2025-11-26 15:56:14] 2025-11-26 20:55:16,236 | INFO     | chi2: 5.443191177126482
[2025-11-26 15:56:14] 2025-11-26 20:55:16,236 | INFO     | current chi2=5.443191177126482 (change=34.29379305432156 %)
[2025-11-26 15:56:14] 2025-11-26 20:55:16,237 | INFO     | sum of square deviations: 238316500763.69427
[2025-11-26 15:56:14] 2025-11-26 20:55:16,252 | INFO     | sum of deviations: 882866657630.502
[2025-11-26 15:56:14] 2025-11-26 20:55:16,252 | INFO     | mean x: 1764162540.0829694
[2025-11-26 15:56:14] 2025-11-26 20:55:16,252 | INFO     | mean y: 2908620.7565502184
[2025-11-26 15:56:14] 2025-11-26 20:55:16,252 | INFO     | intersect: -6532603105.409514
[2025-11-26 15:56:14] 2025-11-26 20:55:16,253 | INFO     | chi2: 5.3252180629758845
[2025-11-26 15:56:14] 2025-11-26 20:55:16,253 | INFO     | current chi2=5.3252180629758845 (change=2.1673520240543303 %)
[2025-11-26 15:56:14] 2025-11-26 20:55:16,254 | INFO     | left removable region: 20
[2025-11-26 15:56:14] 2025-11-26 20:55:16,254 | INFO     | sum of square deviations: 218593835972.44504
[2025-11-26 15:56:14] 2025-11-26 20:55:16,269 | INFO     | sum of deviations: 1376529928206.7322
[2025-11-26 15:56:14] 2025-11-26 20:55:16,269 | INFO     | mean x: 1764162357.0921347
[2025-11-26 15:56:14] 2025-11-26 20:55:16,269 | INFO     | mean y: 2936985.7471910114
[2025-11-26 15:56:14] 2025-11-26 20:55:16,270 | INFO     | intersect: -11106352862.019476
[2025-11-26 15:56:14] 2025-11-26 20:55:16,271 | INFO     | chi2: 0.20016963744261193
[2025-11-26 15:56:14] 2025-11-26 20:55:16,271 | INFO     | current memory leak: 6.30 B/s (using 890 data points, chi2=0.20)
[2025-11-26 15:56:14] 2025-11-26 20:55:16,272 | INFO     | could have reported an average CPU frequency of 3014 MHz (34 samples)
[2025-11-26 15:56:14] 2025-11-26 20:55:16,273 | INFO     | ..............................
[2025-11-26 15:56:14] 2025-11-26 20:55:16,273 | INFO     | . Timing measurements:
[2025-11-26 15:56:14] 2025-11-26 20:55:16,273 | INFO     | . get job = 0 s
[2025-11-26 15:56:14] 2025-11-26 20:55:16,273 | INFO     | . initial setup = 3 s
[2025-11-26 15:56:14] 2025-11-26 20:55:16,273 | INFO     | . payload setup = 18 s
[2025-11-26 15:56:14] 2025-11-26 20:55:16,273 | INFO     | . stage-in = 0 s
[2025-11-26 15:56:14] 2025-11-26 20:55:16,273 | INFO     | . payload execution = 56485 s
[2025-11-26 15:56:14] 2025-11-26 20:55:16,273 | INFO     | . stage-out = 4 s
[2025-11-26 15:56:14] 2025-11-26 20:55:16,273 | INFO     | . log creation = 1 s
[2025-11-26 15:56:14] 2025-11-26 20:55:16,273 | INFO     | ..............................
[2025-11-26 15:56:14] 2025-11-26 20:55:16,369 | INFO     | 
[2025-11-26 15:56:14] 2025-11-26 20:55:16,370 | INFO     | job summary report
[2025-11-26 15:56:14] 2025-11-26 20:55:16,370 | INFO     | --------------------------------------------------
[2025-11-26 15:56:14] 2025-11-26 20:55:16,370 | INFO     | PanDA job id: 6896713865
[2025-11-26 15:56:14] 2025-11-26 20:55:16,370 | INFO     | task id: 47556161
[2025-11-26 15:56:14] 2025-11-26 20:55:16,370 | INFO     | errors: (none)
[2025-11-26 15:56:14] 2025-11-26 20:55:16,370 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 15:56:14] 2025-11-26 20:55:16,370 | INFO     | pilot state: finished 
[2025-11-26 15:56:14] 2025-11-26 20:55:16,370 | INFO     | transexitcode: 0
[2025-11-26 15:56:14] 2025-11-26 20:55:16,370 | INFO     | exeerrorcode: 0
[2025-11-26 15:56:14] 2025-11-26 20:55:16,370 | INFO     | exeerrordiag: 
[2025-11-26 15:56:14] 2025-11-26 20:55:16,370 | INFO     | exitcode: 0
[2025-11-26 15:56:14] 2025-11-26 20:55:16,370 | INFO     | exitmsg: OK
[2025-11-26 15:56:14] 2025-11-26 20:55:16,370 | INFO     | cpuconsumptiontime: 240830 s
[2025-11-26 15:56:14] 2025-11-26 20:55:16,371 | INFO     | nevents: 1000
[2025-11-26 15:56:14] 2025-11-26 20:55:16,371 | INFO     | neventsw: 0
[2025-11-26 15:56:14] 2025-11-26 20:55:16,371 | INFO     | pid: 2914286
[2025-11-26 15:56:14] 2025-11-26 20:55:16,371 | INFO     | pgrp: 2914286
[2025-11-26 15:56:14] 2025-11-26 20:55:16,371 | INFO     | corecount: 8
[2025-11-26 15:56:14] 2025-11-26 20:55:16,371 | INFO     | event service: False
[2025-11-26 15:56:14] 2025-11-26 20:55:16,371 | INFO     | sizes: {0: 2284263, 1: 2284291, 12: 2284291, 14: 2284581, 22: 2284609, 56508: 2337246, 56514: 2346296, 56527: 2346486}
[2025-11-26 15:56:14] 2025-11-26 20:55:16,371 | INFO     | --------------------------------------------------
[2025-11-26 15:56:14] 2025-11-26 20:55:16,371 | INFO     | 
[2025-11-26 15:56:14] 2025-11-26 20:55:16,371 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 15:56:14] 2025-11-26 20:55:16,439 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 15:56:14] 2025-11-26 20:55:16,439 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 15:56:14] 2025-11-26 20:55:16,439 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 15:56:14] 2025-11-26 20:55:16,439 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 15:56:14] 2025-11-26 20:55:16,439 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 15:56:14] 2025-11-26 20:55:16,439 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 15:56:14] 2025-11-26 20:55:16,439 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 15:56:14] 2025-11-26 20:55:16,439 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 15:56:14] 2025-11-26 20:55:16,440 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 15:56:14] 2025-11-26 20:55:16,440 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 15:56:14] 2025-11-26 20:55:16,440 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 15:56:14] 2025-11-26 20:55:16,440 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 15:56:14] 2025-11-26 20:55:16,440 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 15:56:14] 2025-11-26 20:55:16,440 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 15:56:14] 2025-11-26 20:55:16,440 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 15:56:14] 2025-11-26 20:55:16,440 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 15:56:14] 2025-11-26 20:55:16,440 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 15:56:14] 2025-11-26 20:55:16,440 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 15:56:14] 2025-11-26 20:55:16,440 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 15:56:14] 2025-11-26 20:55:16,440 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 15:56:14] 2025-11-26 20:55:16,440 | INFO     | job 6896713865 has completed (purged errors)
[2025-11-26 15:56:14] 2025-11-26 20:55:16,440 | INFO     | overall cleanup function is called
[2025-11-26 15:56:14] 2025-11-26 20:55:17,464 | INFO     | --- collectZombieJob: --- 10, [2914286]
[2025-11-26 15:56:14] 2025-11-26 20:55:17,465 | INFO     | zombie collector waiting for pid 2914286
[2025-11-26 15:56:14] 2025-11-26 20:55:17,465 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 15:56:14] 2025-11-26 20:55:17,465 | INFO     | collected zombie processes
[2025-11-26 15:56:14] 2025-11-26 20:55:17,465 | INFO     | will attempt to kill all subprocesses of pid=2914286
[2025-11-26 15:56:14] 2025-11-26 20:55:18,704 | INFO     | process IDs to be killed: [2914286] (in reverse order)
[2025-11-26 15:56:14] 2025-11-26 20:55:18,951 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 15:56:14] 2025-11-26 20:55:18,951 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 15:56:14] 2025-11-26 20:55:18,987 | INFO     | did not find any defunct processes belonging to 2914286
[2025-11-26 15:56:14] 2025-11-26 20:55:19,011 | INFO     | did not find any defunct processes belonging to 2914286
[2025-11-26 15:56:14] 2025-11-26 20:55:19,012 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 15:56:14] 2025-11-26 20:55:19,012 | INFO     | ready for new job
[2025-11-26 15:56:14] 2025-11-26 20:55:19,013 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 15:56:14] 2025-11-26 20:55:19,016 | INFO     | ***************************************
[2025-11-26 15:56:14] 2025-11-26 20:55:19,017 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 15:56:14] 2025-11-26 20:55:19,017 | INFO     | ***************************************
[2025-11-26 15:56:14] 2025-11-26 20:55:19,017 | INFO     | 
[2025-11-26 15:56:14] 2025-11-26 20:55:19,020 | INFO     | architecture information:
[2025-11-26 15:56:14] 2025-11-26 20:55:19,021 | INFO     | executing command: cat /etc/os-release
[2025-11-26 15:56:14] 2025-11-26 20:55:19,067 | INFO     | cat /etc/os-release:
[2025-11-26 15:56:14] NAME="CentOS Linux"
[2025-11-26 15:56:14] VERSION="7 (Core)"
[2025-11-26 15:56:14] ID="centos"
[2025-11-26 15:56:14] ID_LIKE="rhel fedora"
[2025-11-26 15:56:14] VERSION_ID="7"
[2025-11-26 15:56:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 15:56:14] ANSI_COLOR="0;31"
[2025-11-26 15:56:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 15:56:14] HOME_URL="https://www.centos.org/"
[2025-11-26 15:56:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 15:56:14] 
[2025-11-26 15:56:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 15:56:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 15:56:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 15:56:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 15:56:14] 
[2025-11-26 15:56:14] 2025-11-26 20:55:19,067 | INFO     | ***************************************
[2025-11-26 15:56:14] 2025-11-26 20:55:19,571 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 15:56:14] 2025-11-26 20:55:19,595 | INFO     | sufficient remaining disk space (69347573760 B)
[2025-11-26 15:56:14] 2025-11-26 20:55:19,596 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 15:56:14] 2025-11-26 20:55:19,596 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 15:56:14] 2025-11-26 20:55:19,596 | INFO     | update_server=False
[2025-11-26 15:56:14] 2025-11-26 20:55:19,596 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 15:56:14] 2025-11-26 20:55:19,596 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 15:56:14] 2025-11-26 20:55:19,597 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 15:56:14] 2025-11-26 20:55:19,597 | INFO     | aborting loop
[2025-11-26 15:56:14] 2025-11-26 20:55:19,597 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 15:56:14] 2025-11-26 20:55:20,031 | INFO     | all job control threads have been joined
[2025-11-26 15:56:14] 2025-11-26 20:55:20,426 | INFO     | all payload control threads have been joined
[2025-11-26 15:56:14] 2025-11-26 20:55:20,476 | INFO     | all data control threads have been joined
[2025-11-26 15:56:14] 2025-11-26 20:55:20,603 | INFO     | [job] retrieve thread has finished
[2025-11-26 15:56:14] 2025-11-26 20:55:20,603 | INFO     | [job] job monitor thread has finished
[2025-11-26 15:56:14] 2025-11-26 20:55:20,769 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 15:56:14] 2025-11-26 20:55:20,786 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 15:56:14] 2025-11-26 20:55:20,899 | INFO     | [payload] validate_post thread has finished
[2025-11-26 15:56:14] 2025-11-26 20:55:21,036 | INFO     | [job] control thread has finished
[2025-11-26 15:56:14] 2025-11-26 20:55:21,416 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 15:56:14] 2025-11-26 20:55:21,419 | INFO     | [job] validate thread has finished
[2025-11-26 15:56:14] 2025-11-26 20:55:21,431 | INFO     | [payload] control thread has finished
[2025-11-26 15:56:14] 2025-11-26 20:55:21,435 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 15:56:14] 2025-11-26 20:55:21,482 | INFO     | [data] control thread has finished
[2025-11-26 15:56:14] 2025-11-26 20:55:21,604 | INFO     | [data] copytool_out thread has finished
[2025-11-26 15:56:14] 2025-11-26 20:55:21,621 | INFO     | [data] copytool_in thread has finished
[2025-11-26 15:56:14] 2025-11-26 20:55:21,783 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 15:56:14] 2025-11-26 20:55:22,156 | INFO     | [payload] failed_post thread has finished
[2025-11-26 15:56:14] 2025-11-26 20:55:22,426 | INFO     | [job] queue monitor thread has finished
[2025-11-26 15:56:14] 2025-11-26 20:55:23,607 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 15:56:14] 2025-11-26 20:55:49,638 | INFO     | PID=2906175 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 15:56:14] 2025-11-26 20:55:49,638 | INFO     | .. there are 46 such processes running
[2025-11-26 15:56:14] 2025-11-26 20:55:49,638 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 15:56:14] 2025-11-26 20:55:49,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 15:56:14] 2025-11-26 20:55:49,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 15:56:14] 2025-11-26 20:56:06,974 | INFO     | [monitor] cgroup control has ended
[2025-11-26 15:56:14] 2025-11-26 20:56:07,978 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140698939623232)>', '<ExcThread(monitor, started 140698590357248)>']
[2025-11-26 15:56:14] 2025-11-26 20:56:08,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 15:56:14] 2025-11-26 20:56:08,778 | INFO     | [monitor] control thread has ended
[2025-11-26 15:56:14] 2025-11-26 20:56:13,003 | INFO     | all workflow threads have been joined
[2025-11-26 15:56:14] 2025-11-26 20:56:13,004 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 15:56:14] 2025-11-26 20:56:13,004 | INFO     | traces error code: 0
[2025-11-26 15:56:14] 2025-11-26 20:56:13,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 15:56:14] 2025-11-26 20:56:13,435 [wrapper] ==== pilot stdout END ====
[2025-11-26 15:56:14] 2025-11-26 20:56:13,449 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 15:56:14] 2025-11-26 20:56:13,466 [wrapper] pilotpid: 2906175
[2025-11-26 15:56:14] 2025-11-26 20:56:13,499 [wrapper] Pilot exit status: 0
[2025-11-26 15:56:14] 2025-11-26 20:56:13,589 [wrapper] pandaids: 6896713865
[2025-11-26 15:56:14] 2025-11-26 20:56:13,987 [wrapper] cleanup supervisor_pilot 2900218 2906176
[2025-11-26 15:56:14] 2025-11-26 20:56:14,008 [wrapper] Test setup, not cleaning
[2025-11-26 15:56:14] 2025-11-26 20:56:14,023 [wrapper] apfmon messages muted
[2025-11-26 15:56:14] 2025-11-26 20:56:14,042 [wrapper] ==== wrapper stdout END ====
[2025-11-26 15:56:14] 2025-11-26 20:56:14,070 [wrapper] ==== wrapper stderr END ====
[2025-11-26 15:56:14]  *** Error codes and diagnostics ***
[2025-11-26 15:56:14]     "exeErrorCode": 0,
[2025-11-26 15:56:14]     "exeErrorDiag": "",
[2025-11-26 15:56:14]     "pilotErrorCode": 0,
[2025-11-26 15:56:14]     "pilotErrorDiag": "",
[2025-11-26 15:56:14]  *** Listing of results directory ***
[2025-11-26 15:56:14] total 1315852
[2025-11-26 15:56:14] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 01:04 pilot3.tar.gz
[2025-11-26 15:56:14] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 01:10 queuedata.json
[2025-11-26 15:56:14] -rwx------. 1 boincer umatlas     36292 Nov 25 01:15 runpilot2-wrapper.sh
[2025-11-26 15:56:14] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 15:56:14] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:11 run_atlas
[2025-11-26 15:56:14] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:11 job.xml
[2025-11-26 15:56:14] -rw-r--r--. 2 boincer umatlas 409215497 Nov 26 00:11 EVNT.47483658._002117.pool.root.1
[2025-11-26 15:56:14] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:11 shared
[2025-11-26 15:56:14] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 00:11 input.tar.gz
[2025-11-26 15:56:14] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:11 start_atlas.sh
[2025-11-26 15:56:14] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:11 boinc_lockfile
[2025-11-26 15:56:14] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 00:11 pandaJob.out
[2025-11-26 15:56:14] -rw-------. 1 boincer umatlas        57 Nov 26 00:11 setup.sh.local
[2025-11-26 15:56:14] -rw-------. 1 boincer umatlas    991877 Nov 26 00:12 agis_schedconf.cvmfs.json
[2025-11-26 15:56:14] drwx------. 5 boincer umatlas      4096 Nov 26 00:12 pilot3
[2025-11-26 15:56:14] -rw-r--r--. 1 boincer umatlas       533 Nov 26 15:37 boinc_task_state.xml
[2025-11-26 15:56:14] -rw-r--r--. 1 boincer umatlas      6877 Nov 26 15:46 init_data.xml
[2025-11-26 15:56:14] -rw-------. 1 boincer umatlas 914642410 Nov 26 15:54 HITS.47556161._001007.pool.root.1
[2025-11-26 15:56:14] -rw-------. 1 boincer umatlas      1062 Nov 26 15:54 memory_monitor_summary.json
[2025-11-26 15:56:14] -rw-------. 1 boincer umatlas   1516240 Nov 26 15:55 agis_ddmendpoints.agis.ALL.json
[2025-11-26 15:56:14] -rw-------. 1 boincer umatlas   2114450 Nov 26 15:55 log.47556161._001007.job.log.tgz.1
[2025-11-26 15:56:14] -rw-------. 1 boincer umatlas        95 Nov 26 15:55 pilot_heartbeat.json
[2025-11-26 15:56:14] -rw-------. 1 boincer umatlas      8622 Nov 26 15:55 heartbeat.json
[2025-11-26 15:56:14] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 15:56 boinc_mmap_file
[2025-11-26 15:56:14] -rw-r--r--. 1 boincer umatlas        29 Nov 26 15:56 wrapper_checkpoint.txt
[2025-11-26 15:56:14] -rw-------. 1 boincer umatlas      4824 Nov 26 15:56 pilotlog.txt
[2025-11-26 15:56:14] -rw-------. 1 boincer umatlas   7708856 Nov 26 15:56 log.47556161._001007.job.log.1
[2025-11-26 15:56:14] -rw-------. 1 boincer umatlas       353 Nov 26 15:56 output.list
[2025-11-26 15:56:14] -rw-r--r--. 1 boincer umatlas       620 Nov 26 15:56 runtime_log
[2025-11-26 15:56:14] -rw-------. 1 boincer umatlas   9840640 Nov 26 15:56 result.tar.gz
[2025-11-26 15:56:14] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 15:56 runtime_log.err
[2025-11-26 15:56:14] -rw-------. 1 boincer umatlas       660 Nov 26 15:56 lS3KDmaV1h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTNJKDmwGduRo.diag
[2025-11-26 15:56:14] -rw-r--r--. 1 boincer umatlas     21136 Nov 26 15:56 stderr.txt
[2025-11-26 15:56:14] HITS file was successfully produced:
[2025-11-26 15:56:14] -rw-------. 1 boincer umatlas 914642410 Nov 26 15:54 shared/HITS.pool.root.1
[2025-11-26 15:56:14]  *** Contents of shared directory: ***
[2025-11-26 15:56:14] total 1303052
[2025-11-26 15:56:14] -rw-r--r--. 2 boincer umatlas 409215497 Nov 26 00:11 ATLAS.root_0
[2025-11-26 15:56:14] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 00:11 input.tar.gz
[2025-11-26 15:56:14] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:11 start_atlas.sh
[2025-11-26 15:56:14] -rw-------. 1 boincer umatlas 914642410 Nov 26 15:54 HITS.pool.root.1
[2025-11-26 15:56:14] -rw-------. 1 boincer umatlas   9840640 Nov 26 15:56 result.tar.gz
15:56:16 (2902063): run_atlas exited; CPU time 242115.887776
15:56:16 (2902063): called boinc_finish(0)

</stderr_txt>
]]>

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